Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene019419.t1 | KEH19008.1 | 95.1 | 224 | 11 | 0 | 1 | 224 | 1 | 224 | 1.40E-104 | 389 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene019419.t1 | O64645 | 66.7 | 213 | 67 | 2 | 1 | 213 | 1 | 209 | 3.7e-64 | 246.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene019419.t1 | A0A072TQ92 | 95.1 | 224 | 11 | 0 | 1 | 224 | 1 | 224 | 1.0e-104 | 389.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene019419.t1 | TF | MADS-MIKC |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene019419.t1 | MTR_8g033220 | 95.089 | 224 | 11 | 0 | 1 | 224 | 1 | 224 | 7.45e-155 | 428 |
MS.gene019419.t1 | MTR_8g033220 | 95.089 | 224 | 11 | 0 | 1 | 224 | 1 | 224 | 1.37e-154 | 428 |
MS.gene019419.t1 | MTR_8g033250 | 89.024 | 164 | 18 | 0 | 61 | 224 | 3 | 166 | 5.85e-102 | 292 |
MS.gene019419.t1 | MTR_7g075870 | 68.396 | 212 | 61 | 4 | 1 | 211 | 1 | 207 | 3.52e-96 | 280 |
MS.gene019419.t1 | MTR_7g075870 | 68.545 | 213 | 60 | 5 | 1 | 211 | 1 | 208 | 4.76e-95 | 276 |
MS.gene019419.t1 | MTR_4g102530 | 57.078 | 219 | 75 | 4 | 1 | 216 | 1 | 203 | 7.03e-76 | 228 |
MS.gene019419.t1 | MTR_3g452380 | 44.340 | 212 | 110 | 3 | 1 | 210 | 16 | 221 | 6.17e-53 | 171 |
MS.gene019419.t1 | MTR_2g017865 | 50.888 | 169 | 82 | 1 | 3 | 171 | 18 | 185 | 1.01e-51 | 168 |
MS.gene019419.t1 | MTR_3g005530 | 48.538 | 171 | 87 | 1 | 1 | 171 | 1 | 170 | 5.26e-49 | 160 |
MS.gene019419.t1 | MTR_8g033270 | 49.405 | 168 | 84 | 1 | 1 | 168 | 1 | 167 | 7.26e-48 | 158 |
MS.gene019419.t1 | MTR_8g087860 | 47.929 | 169 | 87 | 1 | 3 | 171 | 19 | 186 | 2.43e-47 | 156 |
MS.gene019419.t1 | MTR_7g075850 | 50.000 | 170 | 81 | 2 | 1 | 168 | 1 | 168 | 4.01e-47 | 156 |
MS.gene019419.t1 | MTR_8g066260 | 49.112 | 169 | 84 | 2 | 1 | 168 | 1 | 168 | 3.02e-45 | 151 |
MS.gene019419.t1 | MTR_2g009890 | 46.591 | 176 | 82 | 3 | 1 | 171 | 1 | 169 | 9.09e-44 | 148 |
MS.gene019419.t1 | MTR_7g016600 | 41.096 | 219 | 115 | 5 | 1 | 212 | 1 | 212 | 2.00e-43 | 146 |
MS.gene019419.t1 | MTR_8g097090 | 47.126 | 174 | 87 | 3 | 1 | 171 | 1 | 172 | 2.16e-43 | 146 |
MS.gene019419.t1 | MTR_6g015975 | 40.183 | 219 | 118 | 5 | 1 | 212 | 1 | 213 | 3.40e-43 | 146 |
MS.gene019419.t1 | MTR_3g084980 | 46.067 | 178 | 91 | 3 | 1 | 175 | 1 | 176 | 3.91e-43 | 145 |
MS.gene019419.t1 | MTR_4g109810 | 45.665 | 173 | 88 | 3 | 1 | 171 | 1 | 169 | 5.58e-43 | 145 |
MS.gene019419.t1 | MTR_4g109830 | 46.471 | 170 | 89 | 2 | 1 | 169 | 1 | 169 | 5.81e-43 | 145 |
MS.gene019419.t1 | MTR_4g036050 | 44.444 | 171 | 94 | 1 | 1 | 170 | 1 | 171 | 1.21e-42 | 143 |
MS.gene019419.t1 | MTR_5g046790 | 41.364 | 220 | 105 | 5 | 1 | 213 | 1 | 203 | 4.91e-42 | 142 |
MS.gene019419.t1 | MTR_4g036050 | 43.529 | 170 | 91 | 2 | 1 | 169 | 1 | 166 | 7.40e-40 | 135 |
MS.gene019419.t1 | MTR_5g031000 | 39.024 | 205 | 121 | 2 | 1 | 205 | 1 | 201 | 8.37e-40 | 137 |
MS.gene019419.t1 | MTR_5g031000 | 43.103 | 174 | 95 | 2 | 1 | 173 | 1 | 171 | 8.39e-40 | 136 |
MS.gene019419.t1 | MTR_7g016630 | 43.275 | 171 | 89 | 3 | 1 | 168 | 1 | 166 | 1.80e-39 | 136 |
MS.gene019419.t1 | MTR_1g101970 | 43.590 | 156 | 88 | 0 | 1 | 156 | 1 | 156 | 2.96e-38 | 131 |
MS.gene019419.t1 | MTR_4g036050 | 42.941 | 170 | 92 | 2 | 1 | 169 | 1 | 166 | 4.04e-37 | 128 |
MS.gene019419.t1 | MTR_4g036050 | 46.207 | 145 | 77 | 1 | 1 | 144 | 1 | 145 | 5.48e-37 | 127 |
MS.gene019419.t1 | MTR_1g053070 | 43.275 | 171 | 94 | 1 | 1 | 168 | 1 | 171 | 8.09e-36 | 127 |
MS.gene019419.t1 | MTR_4g093970 | 43.931 | 173 | 82 | 3 | 1 | 165 | 27 | 192 | 1.24e-35 | 126 |
MS.gene019419.t1 | MTR_0003s0590 | 47.977 | 173 | 81 | 3 | 1 | 168 | 1 | 169 | 1.69e-35 | 126 |
MS.gene019419.t1 | MTR_6g464720 | 42.529 | 174 | 95 | 4 | 1 | 171 | 1 | 172 | 1.69e-34 | 123 |
MS.gene019419.t1 | MTR_1g038300 | 37.864 | 206 | 102 | 5 | 1 | 195 | 1 | 191 | 1.47e-33 | 120 |
MS.gene019419.t1 | MTR_5g032520 | 35.371 | 229 | 127 | 6 | 1 | 213 | 1 | 224 | 2.98e-33 | 119 |
MS.gene019419.t1 | MTR_5g032150 | 36.652 | 221 | 123 | 7 | 1 | 214 | 1 | 211 | 7.19e-33 | 119 |
MS.gene019419.t1 | MTR_3g113030 | 41.875 | 160 | 83 | 3 | 1 | 157 | 1 | 153 | 8.03e-33 | 119 |
MS.gene019419.t1 | MTR_3g088615 | 37.297 | 185 | 103 | 4 | 1 | 178 | 1 | 179 | 6.75e-32 | 115 |
MS.gene019419.t1 | MTR_5g046870 | 63.095 | 84 | 26 | 2 | 1 | 79 | 1 | 84 | 3.27e-30 | 108 |
MS.gene019419.t1 | MTR_5g066180 | 37.853 | 177 | 105 | 2 | 1 | 176 | 1 | 173 | 3.64e-28 | 106 |
MS.gene019419.t1 | MTR_1g029670 | 35.714 | 168 | 94 | 5 | 1 | 165 | 1 | 157 | 5.09e-27 | 102 |
MS.gene019419.t1 | MTR_5g021270 | 36.571 | 175 | 97 | 5 | 1 | 168 | 1 | 168 | 3.49e-26 | 101 |
MS.gene019419.t1 | MTR_5g021270 | 36.571 | 175 | 97 | 5 | 1 | 168 | 1 | 168 | 3.84e-26 | 101 |
MS.gene019419.t1 | MTR_3g102570 | 33.475 | 236 | 115 | 6 | 1 | 205 | 1 | 225 | 1.90e-25 | 101 |
MS.gene019419.t1 | MTR_2g461710 | 72.881 | 59 | 16 | 0 | 1 | 59 | 1 | 59 | 2.50e-25 | 94.4 |
MS.gene019419.t1 | MTR_5g066960 | 68.333 | 60 | 19 | 0 | 1 | 60 | 1 | 60 | 7.37e-25 | 93.2 |
MS.gene019419.t1 | MTR_4g093030 | 51.000 | 100 | 44 | 2 | 1 | 99 | 1 | 96 | 3.04e-24 | 94.7 |
MS.gene019419.t1 | MTR_4g084740 | 30.159 | 189 | 94 | 3 | 1 | 151 | 1 | 189 | 8.97e-21 | 89.0 |
MS.gene019419.t1 | MTR_8g086290 | 35.000 | 160 | 87 | 4 | 3 | 157 | 13 | 160 | 2.32e-19 | 82.4 |
MS.gene019419.t1 | MTR_1g108580 | 30.045 | 223 | 126 | 9 | 3 | 211 | 10 | 216 | 5.93e-19 | 82.4 |
MS.gene019419.t1 | MTR_1g063160 | 40.566 | 106 | 57 | 2 | 1 | 105 | 1 | 101 | 3.12e-18 | 79.3 |
MS.gene019419.t1 | MTR_2g030740 | 53.731 | 67 | 31 | 0 | 3 | 69 | 10 | 76 | 3.58e-18 | 80.5 |
MS.gene019419.t1 | MTR_7g028448 | 39.167 | 120 | 67 | 2 | 14 | 128 | 24 | 142 | 4.27e-18 | 78.6 |
MS.gene019419.t1 | MTR_4g036915 | 39.167 | 120 | 67 | 2 | 14 | 128 | 24 | 142 | 4.27e-18 | 78.6 |
MS.gene019419.t1 | MTR_1g108510 | 30.180 | 222 | 127 | 9 | 3 | 211 | 10 | 216 | 5.03e-18 | 79.7 |
MS.gene019419.t1 | MTR_3g030770 | 50.746 | 67 | 33 | 0 | 3 | 69 | 10 | 76 | 7.68e-18 | 79.3 |
MS.gene019419.t1 | MTR_1g041615 | 72.917 | 48 | 13 | 0 | 13 | 60 | 17 | 64 | 1.46e-17 | 76.3 |
MS.gene019419.t1 | MTR_1g054265 | 38.462 | 104 | 62 | 1 | 1 | 102 | 1 | 104 | 4.08e-17 | 76.3 |
MS.gene019419.t1 | MTR_8g079502 | 44.828 | 87 | 43 | 1 | 1 | 87 | 1 | 82 | 4.59e-17 | 76.3 |
MS.gene019419.t1 | MTR_2g105290 | 39.286 | 112 | 65 | 1 | 1 | 112 | 11 | 119 | 4.99e-17 | 76.3 |
MS.gene019419.t1 | MTR_3g052870 | 50.746 | 67 | 33 | 0 | 3 | 69 | 10 | 76 | 5.96e-17 | 76.6 |
MS.gene019419.t1 | MTR_8g051580 | 35.577 | 104 | 65 | 1 | 1 | 102 | 1 | 104 | 8.30e-17 | 75.5 |
MS.gene019419.t1 | MTR_8g043650 | 52.239 | 67 | 32 | 0 | 3 | 69 | 10 | 76 | 8.96e-17 | 76.6 |
MS.gene019419.t1 | MTR_1g105920 | 50.746 | 67 | 33 | 0 | 3 | 69 | 10 | 76 | 9.62e-17 | 76.6 |
MS.gene019419.t1 | MTR_3g052920 | 52.239 | 67 | 32 | 0 | 3 | 69 | 10 | 76 | 1.08e-16 | 76.3 |
MS.gene019419.t1 | MTR_1g105910 | 50.746 | 67 | 33 | 0 | 3 | 69 | 10 | 76 | 1.40e-16 | 76.3 |
MS.gene019419.t1 | MTR_1g075600 | 50.746 | 67 | 33 | 0 | 3 | 69 | 10 | 76 | 1.99e-16 | 75.9 |
MS.gene019419.t1 | MTR_1g077360 | 30.660 | 212 | 107 | 7 | 3 | 211 | 10 | 184 | 2.01e-16 | 75.9 |
MS.gene019419.t1 | MTR_2g093190 | 49.254 | 67 | 34 | 0 | 3 | 69 | 10 | 76 | 2.82e-16 | 75.1 |
MS.gene019419.t1 | MTR_1g047550 | 49.275 | 69 | 35 | 0 | 1 | 69 | 1 | 69 | 3.27e-16 | 73.9 |
MS.gene019419.t1 | MTR_5g045560 | 43.373 | 83 | 42 | 1 | 3 | 85 | 10 | 87 | 3.48e-16 | 75.1 |
MS.gene019419.t1 | MTR_5g053390 | 50.746 | 67 | 33 | 0 | 3 | 69 | 10 | 76 | 4.82e-16 | 74.7 |
MS.gene019419.t1 | MTR_1g012570 | 49.254 | 67 | 34 | 0 | 3 | 69 | 10 | 76 | 5.51e-16 | 74.7 |
MS.gene019419.t1 | MTR_1g106070 | 47.761 | 67 | 35 | 0 | 3 | 69 | 10 | 76 | 7.31e-16 | 73.2 |
MS.gene019419.t1 | MTR_2g085280 | 49.254 | 67 | 34 | 0 | 3 | 69 | 10 | 76 | 8.19e-16 | 73.9 |
MS.gene019419.t1 | MTR_2g085250 | 49.254 | 67 | 34 | 0 | 3 | 69 | 10 | 76 | 8.88e-16 | 73.9 |
MS.gene019419.t1 | MTR_4g094632 | 30.137 | 146 | 91 | 3 | 1 | 141 | 1 | 140 | 1.39e-15 | 71.6 |
MS.gene019419.t1 | MTR_4g131030 | 42.529 | 87 | 45 | 1 | 1 | 87 | 1 | 82 | 1.80e-15 | 72.8 |
MS.gene019419.t1 | MTR_0121s0100 | 46.269 | 67 | 36 | 0 | 3 | 69 | 10 | 76 | 3.56e-15 | 70.1 |
MS.gene019419.t1 | MTR_5g041650 | 28.415 | 183 | 100 | 5 | 1 | 155 | 38 | 217 | 7.92e-15 | 72.8 |
MS.gene019419.t1 | MTR_4g094638 | 44.928 | 69 | 38 | 0 | 1 | 69 | 1 | 69 | 8.39e-15 | 70.1 |
MS.gene019419.t1 | MTR_5g055100 | 47.761 | 67 | 35 | 0 | 3 | 69 | 10 | 76 | 9.34e-15 | 71.2 |
MS.gene019419.t1 | MTR_3g030780 | 45.714 | 70 | 36 | 1 | 2 | 69 | 7 | 76 | 2.11e-14 | 67.8 |
MS.gene019419.t1 | MTR_8g046350 | 35.577 | 104 | 62 | 3 | 1 | 102 | 1 | 101 | 2.14e-14 | 68.6 |
MS.gene019419.t1 | MTR_0121s0080 | 46.154 | 65 | 35 | 0 | 5 | 69 | 12 | 76 | 8.63e-14 | 68.6 |
MS.gene019419.t1 | MTR_3g080940 | 44.776 | 67 | 37 | 0 | 3 | 69 | 10 | 76 | 2.11e-13 | 67.0 |
MS.gene019419.t1 | MTR_1g105905 | 49.153 | 59 | 30 | 0 | 11 | 69 | 1 | 59 | 4.16e-13 | 66.2 |
MS.gene019419.t1 | MTR_4g108720 | 43.662 | 71 | 38 | 1 | 1 | 69 | 1 | 71 | 6.09e-13 | 67.4 |
MS.gene019419.t1 | MTR_4g127140 | 36.735 | 98 | 59 | 1 | 15 | 112 | 25 | 119 | 8.43e-13 | 65.1 |
MS.gene019419.t1 | MTR_3g067875 | 50.000 | 56 | 27 | 1 | 11 | 66 | 1 | 55 | 2.74e-11 | 57.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene019419.t1 | AT2G45660 | 64.186 | 215 | 69 | 3 | 1 | 213 | 1 | 209 | 4.15e-91 | 267 |
MS.gene019419.t1 | AT2G45660 | 73.913 | 161 | 37 | 2 | 1 | 159 | 1 | 158 | 6.77e-81 | 239 |
MS.gene019419.t1 | AT4G22950 | 57.080 | 226 | 83 | 3 | 1 | 222 | 1 | 216 | 3.17e-78 | 234 |
MS.gene019419.t1 | AT4G22950 | 57.080 | 226 | 83 | 3 | 1 | 222 | 1 | 216 | 3.17e-78 | 234 |
MS.gene019419.t1 | AT5G62165 | 54.930 | 213 | 89 | 3 | 1 | 213 | 1 | 206 | 5.37e-75 | 226 |
MS.gene019419.t1 | AT5G62165 | 54.930 | 213 | 89 | 3 | 1 | 213 | 1 | 206 | 5.37e-75 | 226 |
MS.gene019419.t1 | AT5G62165 | 54.930 | 213 | 89 | 3 | 1 | 213 | 1 | 206 | 5.37e-75 | 226 |
MS.gene019419.t1 | AT4G22950 | 65.497 | 171 | 57 | 1 | 1 | 171 | 1 | 169 | 5.60e-74 | 222 |
MS.gene019419.t1 | AT4G11880 | 57.399 | 223 | 89 | 3 | 1 | 222 | 1 | 218 | 2.23e-71 | 217 |
MS.gene019419.t1 | AT4G11880 | 57.399 | 223 | 89 | 3 | 1 | 222 | 1 | 218 | 2.23e-71 | 217 |
MS.gene019419.t1 | AT5G62165 | 62.420 | 157 | 58 | 1 | 1 | 157 | 1 | 156 | 2.73e-69 | 209 |
MS.gene019419.t1 | AT5G62165 | 62.420 | 157 | 58 | 1 | 1 | 157 | 1 | 156 | 2.73e-69 | 209 |
MS.gene019419.t1 | AT5G62165 | 62.420 | 157 | 58 | 1 | 1 | 157 | 1 | 156 | 2.73e-69 | 209 |
MS.gene019419.t1 | AT4G11880 | 65.823 | 158 | 51 | 2 | 1 | 157 | 1 | 156 | 4.00e-67 | 204 |
MS.gene019419.t1 | AT4G11880 | 65.823 | 158 | 51 | 2 | 1 | 157 | 1 | 156 | 4.00e-67 | 204 |
MS.gene019419.t1 | AT5G62165 | 51.174 | 213 | 83 | 4 | 1 | 213 | 1 | 192 | 6.91e-65 | 199 |
MS.gene019419.t1 | AT5G62165 | 51.174 | 213 | 83 | 4 | 1 | 213 | 1 | 192 | 6.91e-65 | 199 |
MS.gene019419.t1 | AT5G62165 | 59.603 | 151 | 60 | 1 | 1 | 151 | 1 | 150 | 1.02e-63 | 195 |
MS.gene019419.t1 | AT5G62165 | 59.603 | 151 | 60 | 1 | 1 | 151 | 1 | 150 | 1.02e-63 | 195 |
MS.gene019419.t1 | AT5G62165 | 59.603 | 151 | 60 | 1 | 1 | 151 | 1 | 150 | 1.02e-63 | 195 |
MS.gene019419.t1 | AT5G62165 | 59.603 | 151 | 60 | 1 | 1 | 151 | 1 | 150 | 1.02e-63 | 195 |
MS.gene019419.t1 | AT5G62165 | 59.603 | 151 | 60 | 1 | 1 | 151 | 1 | 150 | 1.02e-63 | 195 |
MS.gene019419.t1 | AT5G51870 | 47.465 | 217 | 102 | 2 | 1 | 216 | 1 | 206 | 2.47e-61 | 191 |
MS.gene019419.t1 | AT5G51870 | 45.982 | 224 | 107 | 2 | 1 | 216 | 1 | 218 | 1.28e-58 | 184 |
MS.gene019419.t1 | AT5G51870 | 45.982 | 224 | 107 | 2 | 1 | 216 | 11 | 228 | 1.75e-58 | 184 |
MS.gene019419.t1 | AT5G51860 | 43.981 | 216 | 115 | 1 | 1 | 216 | 1 | 210 | 1.29e-54 | 174 |
MS.gene019419.t1 | AT5G51860 | 44.037 | 218 | 103 | 2 | 1 | 216 | 1 | 201 | 5.77e-54 | 172 |
MS.gene019419.t1 | AT3G58780 | 49.123 | 171 | 86 | 1 | 1 | 171 | 22 | 191 | 5.61e-51 | 166 |
MS.gene019419.t1 | AT3G58780 | 49.123 | 171 | 86 | 1 | 1 | 171 | 16 | 185 | 6.34e-51 | 166 |
MS.gene019419.t1 | AT4G09960 | 50.292 | 171 | 84 | 1 | 1 | 171 | 1 | 170 | 1.18e-50 | 164 |
MS.gene019419.t1 | AT4G09960 | 50.292 | 171 | 84 | 1 | 1 | 171 | 2 | 171 | 1.33e-50 | 164 |
MS.gene019419.t1 | AT4G09960 | 50.292 | 171 | 84 | 1 | 1 | 171 | 11 | 180 | 2.01e-50 | 164 |
MS.gene019419.t1 | AT4G18960 | 50.888 | 169 | 82 | 1 | 3 | 171 | 19 | 186 | 2.78e-50 | 164 |
MS.gene019419.t1 | AT4G09960 | 50.292 | 171 | 84 | 1 | 1 | 171 | 27 | 196 | 4.84e-50 | 164 |
MS.gene019419.t1 | AT2G42830 | 49.112 | 169 | 85 | 1 | 3 | 171 | 18 | 185 | 6.20e-50 | 163 |
MS.gene019419.t1 | AT5G51870 | 54.483 | 145 | 66 | 0 | 1 | 145 | 1 | 145 | 1.18e-49 | 160 |
MS.gene019419.t1 | AT5G51870 | 54.483 | 145 | 66 | 0 | 1 | 145 | 24 | 168 | 5.60e-49 | 159 |
MS.gene019419.t1 | AT2G45650 | 50.581 | 172 | 83 | 1 | 1 | 172 | 1 | 170 | 1.04e-48 | 160 |
MS.gene019419.t1 | AT2G42830 | 49.080 | 163 | 82 | 1 | 3 | 165 | 18 | 179 | 1.34e-48 | 160 |
MS.gene019419.t1 | AT4G09960 | 54.545 | 143 | 64 | 1 | 1 | 143 | 1 | 142 | 6.04e-48 | 157 |
MS.gene019419.t1 | AT4G09960 | 52.632 | 152 | 71 | 1 | 1 | 152 | 96 | 246 | 2.31e-47 | 159 |
MS.gene019419.t1 | AT3G58780 | 53.846 | 143 | 65 | 1 | 3 | 145 | 18 | 159 | 6.05e-47 | 156 |
MS.gene019419.t1 | AT2G03710 | 45.087 | 173 | 91 | 2 | 1 | 171 | 1 | 171 | 7.95e-47 | 153 |
MS.gene019419.t1 | AT3G61120 | 50.311 | 161 | 77 | 1 | 1 | 161 | 1 | 158 | 2.80e-46 | 154 |
MS.gene019419.t1 | AT2G03710 | 45.087 | 173 | 91 | 2 | 1 | 171 | 1 | 171 | 4.04e-46 | 154 |
MS.gene019419.t1 | AT2G03710 | 45.087 | 173 | 91 | 2 | 1 | 171 | 1 | 171 | 4.83e-46 | 154 |
MS.gene019419.t1 | AT3G58780 | 46.784 | 171 | 83 | 2 | 1 | 171 | 16 | 178 | 8.26e-46 | 152 |
MS.gene019419.t1 | AT3G02310 | 41.441 | 222 | 107 | 6 | 1 | 207 | 1 | 214 | 2.16e-45 | 152 |
MS.gene019419.t1 | AT3G58780 | 42.857 | 196 | 86 | 2 | 1 | 171 | 16 | 210 | 3.02e-45 | 152 |
MS.gene019419.t1 | AT1G24260 | 50.581 | 172 | 79 | 5 | 1 | 168 | 1 | 170 | 2.01e-44 | 149 |
MS.gene019419.t1 | AT1G69120 | 47.674 | 172 | 88 | 2 | 1 | 171 | 1 | 171 | 3.35e-44 | 148 |
MS.gene019419.t1 | AT5G15800 | 46.629 | 178 | 81 | 4 | 1 | 171 | 1 | 171 | 3.58e-44 | 149 |
MS.gene019419.t1 | AT1G24260 | 49.711 | 173 | 80 | 4 | 1 | 168 | 1 | 171 | 3.61e-44 | 149 |
MS.gene019419.t1 | AT3G02310 | 46.629 | 178 | 81 | 4 | 1 | 171 | 1 | 171 | 5.49e-44 | 146 |
MS.gene019419.t1 | AT5G15800 | 46.629 | 178 | 81 | 4 | 1 | 171 | 1 | 171 | 6.42e-44 | 148 |
MS.gene019419.t1 | AT1G69120 | 47.674 | 172 | 88 | 2 | 1 | 171 | 1 | 171 | 1.08e-43 | 147 |
MS.gene019419.t1 | AT1G26310 | 46.821 | 173 | 90 | 2 | 1 | 171 | 1 | 173 | 8.28e-43 | 145 |
MS.gene019419.t1 | AT3G57230 | 42.708 | 192 | 106 | 3 | 1 | 192 | 1 | 188 | 2.56e-42 | 143 |
MS.gene019419.t1 | AT3G57230 | 42.708 | 192 | 106 | 3 | 1 | 192 | 1 | 188 | 2.56e-42 | 143 |
MS.gene019419.t1 | AT1G24260 | 50.617 | 162 | 73 | 4 | 1 | 157 | 1 | 160 | 2.99e-42 | 143 |
MS.gene019419.t1 | AT5G60910 | 45.930 | 172 | 91 | 2 | 1 | 171 | 1 | 171 | 4.43e-42 | 143 |
MS.gene019419.t1 | AT4G37940 | 43.931 | 173 | 91 | 3 | 1 | 171 | 1 | 169 | 7.12e-41 | 139 |
MS.gene019419.t1 | AT3G57230 | 47.917 | 144 | 73 | 1 | 1 | 144 | 1 | 142 | 5.10e-40 | 134 |
MS.gene019419.t1 | AT5G13790 | 44.643 | 168 | 88 | 1 | 1 | 168 | 1 | 163 | 2.80e-39 | 136 |
MS.gene019419.t1 | AT2G22630 | 45.087 | 173 | 89 | 3 | 1 | 171 | 1 | 169 | 9.68e-39 | 134 |
MS.gene019419.t1 | AT2G22630 | 45.087 | 173 | 89 | 3 | 1 | 171 | 1 | 169 | 9.68e-39 | 134 |
MS.gene019419.t1 | AT3G30260 | 44.681 | 188 | 97 | 4 | 1 | 183 | 1 | 186 | 1.43e-38 | 134 |
MS.gene019419.t1 | AT5G62165 | 67.442 | 86 | 28 | 0 | 1 | 86 | 1 | 86 | 6.89e-38 | 128 |
MS.gene019419.t1 | AT5G13790 | 44.048 | 168 | 86 | 1 | 1 | 168 | 1 | 160 | 7.72e-38 | 132 |
MS.gene019419.t1 | AT4G37940 | 42.775 | 173 | 93 | 3 | 1 | 171 | 1 | 169 | 8.18e-38 | 131 |
MS.gene019419.t1 | AT4G37940 | 46.309 | 149 | 74 | 3 | 1 | 147 | 1 | 145 | 2.83e-37 | 128 |
MS.gene019419.t1 | AT4G24540 | 36.161 | 224 | 125 | 4 | 1 | 213 | 1 | 217 | 1.08e-36 | 128 |
MS.gene019419.t1 | AT5G23260 | 44.311 | 167 | 87 | 4 | 1 | 165 | 1 | 163 | 4.50e-36 | 127 |
MS.gene019419.t1 | AT5G23260 | 44.311 | 167 | 87 | 4 | 1 | 165 | 17 | 179 | 6.85e-36 | 127 |
MS.gene019419.t1 | AT2G22540 | 42.442 | 172 | 90 | 2 | 1 | 168 | 1 | 167 | 9.82e-35 | 124 |
MS.gene019419.t1 | AT2G22540 | 42.442 | 172 | 90 | 2 | 1 | 168 | 1 | 167 | 9.82e-35 | 124 |
MS.gene019419.t1 | AT5G10140 | 43.125 | 160 | 77 | 3 | 1 | 157 | 1 | 149 | 9.99e-34 | 119 |
MS.gene019419.t1 | AT3G57390 | 39.444 | 180 | 91 | 3 | 1 | 168 | 1 | 174 | 1.13e-33 | 120 |
MS.gene019419.t1 | AT3G57390 | 33.468 | 248 | 135 | 4 | 1 | 224 | 1 | 242 | 1.89e-33 | 121 |
MS.gene019419.t1 | AT5G23260 | 44.311 | 167 | 82 | 5 | 1 | 165 | 17 | 174 | 3.48e-33 | 120 |
MS.gene019419.t1 | AT5G23260 | 41.436 | 181 | 96 | 5 | 1 | 175 | 1 | 177 | 7.70e-33 | 119 |
MS.gene019419.t1 | AT5G65060 | 39.655 | 174 | 95 | 3 | 1 | 173 | 1 | 165 | 8.86e-33 | 117 |
MS.gene019419.t1 | AT2G14210 | 44.379 | 169 | 91 | 3 | 1 | 168 | 1 | 167 | 9.93e-33 | 119 |
MS.gene019419.t1 | AT2G14210 | 44.379 | 169 | 91 | 3 | 1 | 168 | 1 | 167 | 1.17e-32 | 118 |
MS.gene019419.t1 | AT1G71692 | 41.899 | 179 | 95 | 3 | 1 | 171 | 1 | 178 | 3.26e-32 | 116 |
MS.gene019419.t1 | AT5G65060 | 40.000 | 170 | 92 | 3 | 1 | 169 | 1 | 161 | 5.58e-32 | 115 |
MS.gene019419.t1 | AT5G10140 | 42.484 | 153 | 78 | 2 | 1 | 152 | 1 | 144 | 2.42e-31 | 113 |
MS.gene019419.t1 | AT5G65070 | 40.314 | 191 | 97 | 4 | 1 | 185 | 1 | 180 | 3.76e-31 | 113 |
MS.gene019419.t1 | AT5G10140 | 41.935 | 155 | 76 | 3 | 1 | 152 | 1 | 144 | 4.19e-31 | 113 |
MS.gene019419.t1 | AT5G10140 | 42.484 | 153 | 78 | 2 | 1 | 152 | 1 | 144 | 5.06e-31 | 112 |
MS.gene019419.t1 | AT5G65070 | 37.915 | 211 | 105 | 4 | 1 | 185 | 1 | 211 | 7.00e-31 | 114 |
MS.gene019419.t1 | AT3G54340 | 39.877 | 163 | 88 | 3 | 1 | 160 | 1 | 156 | 1.43e-30 | 113 |
MS.gene019419.t1 | AT5G65060 | 38.506 | 174 | 86 | 4 | 1 | 173 | 1 | 154 | 5.97e-30 | 110 |
MS.gene019419.t1 | AT5G65050 | 38.506 | 174 | 97 | 3 | 1 | 173 | 1 | 165 | 1.75e-29 | 109 |
MS.gene019419.t1 | AT2G22540 | 39.535 | 172 | 90 | 3 | 1 | 168 | 1 | 162 | 3.42e-29 | 109 |
MS.gene019419.t1 | AT5G65050 | 39.053 | 169 | 93 | 3 | 1 | 168 | 1 | 160 | 5.01e-29 | 107 |
MS.gene019419.t1 | AT5G65070 | 36.792 | 212 | 107 | 4 | 1 | 185 | 1 | 212 | 1.57e-28 | 107 |
MS.gene019419.t1 | AT1G77080 | 40.782 | 179 | 86 | 3 | 1 | 173 | 1 | 165 | 2.63e-28 | 106 |
MS.gene019419.t1 | AT1G77080 | 41.143 | 175 | 83 | 3 | 1 | 169 | 1 | 161 | 1.16e-27 | 103 |
MS.gene019419.t1 | AT1G77080 | 41.143 | 175 | 83 | 3 | 1 | 169 | 1 | 161 | 1.30e-27 | 103 |
MS.gene019419.t1 | AT5G65070 | 37.778 | 180 | 89 | 3 | 1 | 157 | 1 | 180 | 4.38e-27 | 103 |
MS.gene019419.t1 | AT5G65050 | 39.103 | 156 | 85 | 3 | 1 | 155 | 1 | 147 | 5.67e-27 | 102 |
MS.gene019419.t1 | AT5G20240 | 37.838 | 148 | 84 | 3 | 1 | 146 | 1 | 142 | 7.12e-27 | 101 |
MS.gene019419.t1 | AT1G77080 | 41.618 | 173 | 89 | 2 | 1 | 173 | 1 | 161 | 7.60e-27 | 102 |
MS.gene019419.t1 | AT5G20240 | 37.584 | 149 | 85 | 3 | 1 | 147 | 1 | 143 | 1.01e-26 | 102 |
MS.gene019419.t1 | AT1G31140 | 38.554 | 166 | 95 | 2 | 1 | 159 | 1 | 166 | 1.15e-26 | 102 |
MS.gene019419.t1 | AT5G65050 | 37.356 | 174 | 88 | 4 | 1 | 173 | 1 | 154 | 1.34e-26 | 101 |
MS.gene019419.t1 | AT5G65080 | 38.919 | 185 | 104 | 3 | 1 | 185 | 8 | 183 | 2.65e-26 | 101 |
MS.gene019419.t1 | AT1G31140 | 38.554 | 166 | 93 | 3 | 1 | 159 | 1 | 164 | 5.85e-26 | 100 |
MS.gene019419.t1 | AT5G65080 | 37.975 | 158 | 88 | 3 | 1 | 157 | 8 | 156 | 9.41e-26 | 99.4 |
MS.gene019419.t1 | AT5G65070 | 40.667 | 150 | 75 | 3 | 1 | 147 | 1 | 139 | 1.51e-25 | 97.8 |
MS.gene019419.t1 | AT1G77080 | 39.583 | 192 | 97 | 4 | 1 | 173 | 1 | 192 | 1.05e-24 | 97.4 |
MS.gene019419.t1 | AT1G77080 | 41.509 | 159 | 81 | 2 | 1 | 159 | 1 | 147 | 2.64e-23 | 92.0 |
MS.gene019419.t1 | AT1G77980 | 29.717 | 212 | 109 | 5 | 1 | 174 | 1 | 210 | 5.01e-21 | 89.7 |
MS.gene019419.t1 | AT1G22130 | 58.333 | 72 | 29 | 1 | 1 | 71 | 1 | 72 | 1.16e-20 | 89.0 |
MS.gene019419.t1 | AT5G62165 | 45.192 | 104 | 51 | 2 | 110 | 213 | 56 | 153 | 6.05e-20 | 83.2 |
MS.gene019419.t1 | AT5G62165 | 45.192 | 104 | 51 | 2 | 110 | 213 | 56 | 153 | 6.05e-20 | 83.2 |
MS.gene019419.t1 | AT5G60440 | 32.941 | 170 | 82 | 5 | 3 | 156 | 8 | 161 | 1.92e-19 | 85.1 |
MS.gene019419.t1 | AT1G77950 | 26.230 | 244 | 134 | 6 | 1 | 204 | 1 | 238 | 4.46e-19 | 83.2 |
MS.gene019419.t1 | AT1G77950 | 26.230 | 244 | 134 | 6 | 1 | 204 | 1 | 238 | 4.46e-19 | 83.2 |
MS.gene019419.t1 | AT1G77950 | 26.230 | 244 | 134 | 6 | 1 | 204 | 1 | 238 | 4.46e-19 | 83.2 |
MS.gene019419.t1 | AT1G77950 | 26.230 | 244 | 134 | 6 | 1 | 204 | 1 | 238 | 4.46e-19 | 83.2 |
MS.gene019419.t1 | AT4G37435 | 54.545 | 66 | 30 | 0 | 1 | 66 | 1 | 66 | 1.14e-17 | 78.2 |
MS.gene019419.t1 | AT4G36590 | 53.623 | 69 | 32 | 0 | 3 | 71 | 8 | 76 | 1.94e-17 | 78.6 |
MS.gene019419.t1 | AT3G66656 | 46.479 | 71 | 38 | 0 | 1 | 71 | 1 | 71 | 1.21e-16 | 75.1 |
MS.gene019419.t1 | AT2G34440 | 44.928 | 69 | 38 | 0 | 1 | 69 | 1 | 69 | 4.13e-16 | 73.6 |
MS.gene019419.t1 | AT1G18750 | 49.296 | 71 | 34 | 1 | 1 | 69 | 1 | 71 | 7.00e-16 | 75.9 |
MS.gene019419.t1 | AT2G03060 | 28.986 | 207 | 108 | 6 | 1 | 179 | 1 | 196 | 7.26e-16 | 75.9 |
MS.gene019419.t1 | AT1G18750 | 49.296 | 71 | 34 | 1 | 1 | 69 | 1 | 71 | 8.10e-16 | 75.9 |
MS.gene019419.t1 | AT2G03060 | 28.986 | 207 | 108 | 6 | 1 | 179 | 1 | 196 | 8.37e-16 | 75.9 |
MS.gene019419.t1 | AT2G03060 | 28.986 | 207 | 108 | 6 | 1 | 179 | 1 | 196 | 8.37e-16 | 75.9 |
MS.gene019419.t1 | AT2G03060 | 28.986 | 207 | 108 | 6 | 1 | 179 | 1 | 196 | 8.37e-16 | 75.9 |
MS.gene019419.t1 | AT1G18750 | 49.296 | 71 | 34 | 1 | 1 | 69 | 1 | 71 | 9.33e-16 | 75.9 |
MS.gene019419.t1 | AT2G24840 | 42.105 | 95 | 49 | 2 | 3 | 91 | 64 | 158 | 2.43e-15 | 73.2 |
MS.gene019419.t1 | AT1G01530 | 45.588 | 68 | 37 | 0 | 1 | 68 | 6 | 73 | 3.02e-15 | 72.8 |
MS.gene019419.t1 | AT1G69540 | 28.022 | 182 | 100 | 4 | 1 | 154 | 1 | 179 | 1.29e-14 | 72.0 |
MS.gene019419.t1 | AT1G69540 | 28.022 | 182 | 100 | 4 | 1 | 154 | 1 | 179 | 2.13e-14 | 71.6 |
MS.gene019419.t1 | AT1G65360 | 41.176 | 68 | 40 | 0 | 3 | 70 | 8 | 75 | 6.92e-14 | 68.6 |
MS.gene019419.t1 | AT3G04100 | 42.857 | 70 | 40 | 0 | 5 | 74 | 17 | 86 | 7.79e-14 | 68.2 |
MS.gene019419.t1 | AT1G72350 | 42.045 | 88 | 49 | 1 | 3 | 90 | 44 | 129 | 2.04e-13 | 67.4 |
MS.gene019419.t1 | AT4G18960 | 33.600 | 125 | 81 | 2 | 48 | 171 | 49 | 172 | 2.97e-13 | 66.2 |
MS.gene019419.t1 | AT4G18960 | 33.600 | 125 | 81 | 2 | 48 | 171 | 49 | 172 | 4.13e-13 | 66.6 |
MS.gene019419.t1 | AT4G18960 | 33.600 | 125 | 81 | 2 | 48 | 171 | 49 | 172 | 4.13e-13 | 66.6 |
MS.gene019419.t1 | AT1G47760 | 32.456 | 114 | 67 | 1 | 1 | 104 | 1 | 114 | 4.54e-13 | 65.5 |
MS.gene019419.t1 | AT1G28460 | 47.761 | 67 | 35 | 0 | 5 | 71 | 11 | 77 | 1.16e-12 | 64.3 |
MS.gene019419.t1 | AT1G29962 | 46.269 | 67 | 36 | 0 | 5 | 71 | 11 | 77 | 2.82e-12 | 63.5 |
MS.gene019419.t1 | AT1G69120 | 35.849 | 106 | 67 | 1 | 66 | 171 | 5 | 109 | 3.11e-11 | 60.8 |
MS.gene019419.t1 | AT1G28450 | 43.284 | 67 | 38 | 0 | 5 | 71 | 11 | 77 | 9.23e-11 | 59.3 |
Find 35 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATGCGTCTTGTTCTTGTTTC+TGG | 0.103462 | 8.2:+64156253 | None:intergenic |
CGGTATCGTTCAATCGTTTC+TGG | 0.172599 | 8.2:+64165781 | None:intergenic |
CATACCCTCAGGAAACTCTT+AGG | 0.320734 | 8.2:-64157902 | MS.gene019419:intron |
ACAAAAGATAGAACAACAAT+TGG | 0.412313 | 8.2:-64157846 | MS.gene019419:CDS |
ACATTCTCAAAGAGGAGAAA+TGG | 0.421788 | 8.2:-64171109 | MS.gene019419:CDS |
TCAGTTTCCACATCTGAACT+TGG | 0.431400 | 8.2:+64156292 | None:intergenic |
GGACTGCTTTGATCTGCATA+AGG | 0.435299 | 8.2:+64156313 | None:intergenic |
TCCCTAACAAGCTACACCTT+TGG | 0.439290 | 8.2:+64156226 | None:intergenic |
AAACTCTTAGGAGAAGGTCT+AGG | 0.447821 | 8.2:-64157890 | MS.gene019419:CDS |
GAGAAATGGTTTGTTGAAGA+AGG | 0.485283 | 8.2:-64171095 | MS.gene019419:CDS |
GTGGAAACTGAATTGTTCAT+TGG | 0.485974 | 8.2:-64156280 | MS.gene019419:CDS |
AATTGAGCAGCTAAAGGAAA+AGG | 0.487373 | 8.2:-64157143 | MS.gene019419:intron |
CGTCTTGTTCTTGTTTCTGG+AGG | 0.494655 | 8.2:+64156256 | None:intergenic |
TTATATATTACAGCAATTGA+AGG | 0.502150 | 8.2:-64158075 | MS.gene019419:intron |
TCAACTGATTCAGATGGTGT+TGG | 0.512523 | 8.2:+64165733 | None:intergenic |
TTTATGAATTTGCTAGCTCT+AGG | 0.521973 | 8.2:-64171006 | MS.gene019419:intron |
AACTCTTAGGAGAAGGTCTA+GGG | 0.544433 | 8.2:-64157889 | MS.gene019419:CDS |
AAATGCCATGCTCACGGAGA+AGG | 0.547063 | 8.2:-64156692 | MS.gene019419:intron |
AATTCATAAAGCCTCCCTCT+TGG | 0.547865 | 8.2:+64171019 | None:intergenic |
GGAACAAATTGAGCAGCTAA+AGG | 0.548309 | 8.2:-64157149 | MS.gene019419:CDS |
GACAAGTAACATTCTCAAAG+AGG | 0.550887 | 8.2:-64171117 | MS.gene019419:CDS |
TGAATCAGTTGAAAATACTC+AGG | 0.553467 | 8.2:-64165722 | MS.gene019419:intron |
TGTTGGAGTGCTATTAATCC+TGG | 0.562354 | 8.2:+64165750 | None:intergenic |
ATCAGTGTTGTGTGATGCTG+AGG | 0.567431 | 8.2:-64171062 | MS.gene019419:CDS |
TGCTGAAAATGCCATGCTCA+CGG | 0.570110 | 8.2:-64156698 | MS.gene019419:CDS |
CTCAGGAAACTCTTAGGAGA+AGG | 0.570268 | 8.2:-64157896 | MS.gene019419:intron |
ATTTACCTTCTCCGTGAGCA+TGG | 0.576085 | 8.2:+64156687 | None:intergenic |
AACGATACCGCAATCATACC+AGG | 0.576369 | 8.2:-64165768 | MS.gene019419:CDS |
ACCTTCTTGAGACTTCAAAA+CGG | 0.589369 | 8.2:-64158022 | MS.gene019419:intron |
GTATGGTAACTATTCATCGC+AGG | 0.600345 | 8.2:-64156377 | MS.gene019419:CDS |
AAGCAGTCCAAGTTCAGATG+TGG | 0.601808 | 8.2:-64156299 | MS.gene019419:CDS |
AACAAGACGCATTTCTCCAA+AGG | 0.605530 | 8.2:-64156242 | MS.gene019419:CDS |
TTCATCGCAGGAAGAAACAA+AGG | 0.617991 | 8.2:-64156365 | MS.gene019419:CDS |
ACACAACACTGATAACTCAA+AGG | 0.638291 | 8.2:+64171072 | None:intergenic |
TATTAATCCTGGTATGATTG+CGG | 0.644304 | 8.2:+64165761 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 64156237 | 64171188 | 64156237 | ID=MS.gene019419 |
chr8.2 | mRNA | 64156237 | 64171188 | 64156237 | ID=MS.gene019419.t1;Parent=MS.gene019419 |
chr8.2 | exon | 64171007 | 64171188 | 64171007 | ID=MS.gene019419.t1.exon1;Parent=MS.gene019419.t1 |
chr8.2 | CDS | 64171007 | 64171188 | 64171007 | ID=cds.MS.gene019419.t1;Parent=MS.gene019419.t1 |
chr8.2 | exon | 64165723 | 64165807 | 64165723 | ID=MS.gene019419.t1.exon2;Parent=MS.gene019419.t1 |
chr8.2 | CDS | 64165723 | 64165807 | 64165723 | ID=cds.MS.gene019419.t1;Parent=MS.gene019419.t1 |
chr8.2 | exon | 64158023 | 64158084 | 64158023 | ID=MS.gene019419.t1.exon3;Parent=MS.gene019419.t1 |
chr8.2 | CDS | 64158023 | 64158084 | 64158023 | ID=cds.MS.gene019419.t1;Parent=MS.gene019419.t1 |
chr8.2 | exon | 64157814 | 64157913 | 64157814 | ID=MS.gene019419.t1.exon4;Parent=MS.gene019419.t1 |
chr8.2 | CDS | 64157814 | 64157913 | 64157814 | ID=cds.MS.gene019419.t1;Parent=MS.gene019419.t1 |
chr8.2 | exon | 64157144 | 64157185 | 64157144 | ID=MS.gene019419.t1.exon5;Parent=MS.gene019419.t1 |
chr8.2 | CDS | 64157144 | 64157185 | 64157144 | ID=cds.MS.gene019419.t1;Parent=MS.gene019419.t1 |
chr8.2 | exon | 64156693 | 64156734 | 64156693 | ID=MS.gene019419.t1.exon6;Parent=MS.gene019419.t1 |
chr8.2 | CDS | 64156693 | 64156734 | 64156693 | ID=cds.MS.gene019419.t1;Parent=MS.gene019419.t1 |
chr8.2 | exon | 64156237 | 64156398 | 64156237 | ID=MS.gene019419.t1.exon7;Parent=MS.gene019419.t1 |
chr8.2 | CDS | 64156237 | 64156398 | 64156237 | ID=cds.MS.gene019419.t1;Parent=MS.gene019419.t1 |
Gene Sequence |
Protein sequence |