Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019657.t1 | KEH18842.1 | 92.3 | 585 | 43 | 1 | 1 | 583 | 9 | 593 | 2.00E-278 | 968 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019657.t1 | Q84JT7 | 30.7 | 577 | 275 | 14 | 1 | 570 | 72 | 530 | 1.3e-57 | 225.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019657.t1 | A0A072TN61 | 92.3 | 585 | 43 | 1 | 1 | 583 | 9 | 593 | 1.4e-278 | 968.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene019657.t1 | TR | ARID |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019657.t1 | MTR_8g028905 | 91.453 | 585 | 48 | 1 | 1 | 583 | 9 | 593 | 0.0 | 1073 |
| MS.gene019657.t1 | MTR_7g078120 | 42.857 | 602 | 290 | 16 | 1 | 582 | 1 | 568 | 4.23e-141 | 422 |
| MS.gene019657.t1 | MTR_7g078120 | 42.857 | 602 | 290 | 16 | 1 | 582 | 1 | 568 | 2.30e-140 | 422 |
| MS.gene019657.t1 | MTR_8g098605 | 38.720 | 328 | 185 | 8 | 251 | 572 | 246 | 563 | 3.34e-61 | 213 |
| MS.gene019657.t1 | MTR_8g098645 | 50.867 | 173 | 83 | 2 | 400 | 572 | 143 | 313 | 5.77e-52 | 182 |
| MS.gene019657.t1 | MTR_1g073380 | 34.603 | 315 | 183 | 6 | 277 | 572 | 255 | 565 | 1.04e-49 | 181 |
| MS.gene019657.t1 | MTR_8g098635 | 35.385 | 325 | 159 | 8 | 250 | 572 | 72 | 347 | 1.16e-49 | 176 |
| MS.gene019657.t1 | MTR_8g098635 | 34.615 | 312 | 154 | 7 | 263 | 572 | 1 | 264 | 7.35e-49 | 172 |
| MS.gene019657.t1 | MTR_1g073590 | 34.615 | 312 | 175 | 9 | 277 | 572 | 254 | 552 | 1.49e-47 | 175 |
| MS.gene019657.t1 | MTR_1g073530 | 46.023 | 176 | 93 | 2 | 397 | 572 | 382 | 555 | 2.71e-45 | 169 |
| MS.gene019657.t1 | MTR_6g071350 | 35.887 | 248 | 116 | 8 | 251 | 497 | 163 | 368 | 9.93e-31 | 124 |
| MS.gene019657.t1 | MTR_7g066890 | 35.450 | 189 | 109 | 5 | 382 | 564 | 179 | 360 | 3.95e-28 | 116 |
| MS.gene019657.t1 | MTR_7g066890 | 35.450 | 189 | 109 | 5 | 382 | 564 | 281 | 462 | 5.01e-27 | 114 |
| MS.gene019657.t1 | MTR_5g048010 | 32.258 | 248 | 129 | 9 | 251 | 497 | 74 | 283 | 2.57e-22 | 98.6 |
| MS.gene019657.t1 | MTR_3g023780 | 34.066 | 182 | 105 | 5 | 400 | 570 | 149 | 326 | 6.00e-22 | 100 |
| MS.gene019657.t1 | MTR_7g066880 | 30.890 | 191 | 119 | 4 | 380 | 564 | 169 | 352 | 9.13e-20 | 91.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019657.t1 | AT2G46040 | 39.938 | 323 | 153 | 9 | 253 | 570 | 244 | 530 | 1.37e-64 | 221 |
| MS.gene019657.t1 | AT2G46040 | 39.938 | 323 | 153 | 9 | 253 | 570 | 244 | 530 | 1.37e-64 | 221 |
| MS.gene019657.t1 | AT2G46040 | 39.938 | 323 | 153 | 9 | 253 | 570 | 258 | 544 | 1.43e-64 | 222 |
| MS.gene019657.t1 | AT4G11400 | 34.694 | 343 | 184 | 8 | 263 | 581 | 225 | 551 | 6.77e-55 | 196 |
| MS.gene019657.t1 | AT4G11400 | 34.694 | 343 | 184 | 8 | 263 | 581 | 225 | 551 | 6.77e-55 | 196 |
| MS.gene019657.t1 | AT5G04110 | 38.415 | 164 | 87 | 5 | 400 | 552 | 361 | 521 | 4.28e-28 | 119 |
| MS.gene019657.t1 | AT5G04110 | 38.415 | 164 | 87 | 5 | 400 | 552 | 361 | 521 | 4.28e-28 | 119 |
| MS.gene019657.t1 | AT5G04110 | 38.415 | 164 | 87 | 5 | 400 | 552 | 362 | 522 | 4.31e-28 | 119 |
| MS.gene019657.t1 | AT5G04110 | 36.735 | 147 | 79 | 5 | 400 | 535 | 361 | 504 | 1.75e-20 | 95.5 |
| MS.gene019657.t1 | AT1G26580 | 32.124 | 193 | 110 | 6 | 396 | 570 | 65 | 254 | 6.49e-19 | 90.1 |
| MS.gene019657.t1 | AT1G26580 | 32.124 | 193 | 110 | 6 | 396 | 570 | 131 | 320 | 9.96e-19 | 89.7 |
| MS.gene019657.t1 | AT1G26580 | 32.124 | 193 | 110 | 6 | 396 | 570 | 131 | 320 | 9.96e-19 | 89.7 |
| MS.gene019657.t1 | AT2G03470 | 32.240 | 183 | 105 | 6 | 399 | 570 | 122 | 296 | 9.94e-18 | 86.7 |
| MS.gene019657.t1 | AT2G03470 | 32.240 | 183 | 105 | 6 | 399 | 570 | 121 | 295 | 1.07e-17 | 86.3 |
| MS.gene019657.t1 | AT1G13880 | 29.843 | 191 | 112 | 7 | 402 | 579 | 131 | 312 | 2.58e-16 | 82.0 |
| MS.gene019657.t1 | AT1G13880 | 29.843 | 191 | 112 | 7 | 402 | 579 | 130 | 311 | 2.70e-16 | 82.0 |
| MS.gene019657.t1 | AT1G13880 | 29.843 | 191 | 112 | 7 | 402 | 579 | 140 | 321 | 2.76e-16 | 82.0 |
Find 174 sgRNAs with CRISPR-Local
Find 248 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACCACTTAGTATCGCTTTC+AGG | 0.202455 | 8.2:+67627990 | None:intergenic |
| TCAGGCATCGGAACAATTTC+AGG | 0.206652 | 8.2:+67629549 | None:intergenic |
| AGAGAGGATATGAACATTTC+TGG | 0.214678 | 8.2:-67627689 | MS.gene019657:CDS |
| GTCTGGTTTGATGGGGTTTA+AGG | 0.229952 | 8.2:-67630153 | MS.gene019657:CDS |
| CTCCGACAATCTACAATCTT+AGG | 0.256515 | 8.2:-67628241 | MS.gene019657:CDS |
| GACGATCAAGTTATAGTAGA+TGG | 0.274070 | 8.2:-67628079 | MS.gene019657:CDS |
| CGAGCATTGAACAGCAAAAT+TGG | 0.292781 | 8.2:-67629440 | MS.gene019657:CDS |
| TATGGTATGCTTTGCGTTGC+AGG | 0.295894 | 8.2:+67627595 | None:intergenic |
| GTGAGTTGTGGGATTTGGTT+GGG | 0.298315 | 8.2:-67630292 | MS.gene019657:CDS |
| TGATGGTGAGTTGTGGGATT+TGG | 0.308604 | 8.2:-67630297 | MS.gene019657:CDS |
| AAATGTTCATATCCTCTCTT+TGG | 0.311222 | 8.2:+67627693 | None:intergenic |
| AAAGTTTCCCTGCTCTTGTT+AGG | 0.326065 | 8.2:+67627645 | None:intergenic |
| CGTTGGTTCGACGCTGAAAC+TGG | 0.334461 | 8.2:-67630246 | MS.gene019657:CDS |
| CATCCCTCGATTCATCATTC+TGG | 0.335310 | 8.2:+67629878 | None:intergenic |
| TGTGCTAGGCGAAGGAGATT+TGG | 0.343980 | 8.2:-67628147 | MS.gene019657:CDS |
| TTAGTATCGCTTTCAGGATT+CGG | 0.348247 | 8.2:+67627996 | None:intergenic |
| AAGGTTAAGGGTGGAGTTGA+TGG | 0.350428 | 8.2:-67629975 | MS.gene019657:CDS |
| GTTTGATGAGTCTGGTTTGA+TGG | 0.354024 | 8.2:-67630162 | MS.gene019657:CDS |
| GGTGAGTTGTGGGATTTGGT+TGG | 0.366075 | 8.2:-67630293 | MS.gene019657:CDS |
| CAGGGTGGGAATGTGGTGGC+TGG | 0.374383 | 8.2:-67630104 | MS.gene019657:CDS |
| ATGAAGACGAGAAAAGGTTC+AGG | 0.374801 | 8.2:-67627737 | MS.gene019657:CDS |
| GTTGGGGAAGAATGTGGCTT+AGG | 0.382436 | 8.2:-67630275 | MS.gene019657:CDS |
| AGTGGTTTGGGACCCAAGTA+TGG | 0.390417 | 8.2:-67627974 | MS.gene019657:CDS |
| GCTAAGGTGTTTGATGAGTC+TGG | 0.404181 | 8.2:-67630170 | MS.gene019657:CDS |
| GAAAGCGATACTAAGTGGTT+TGG | 0.405886 | 8.2:-67627987 | MS.gene019657:CDS |
| TTTGATGAGTCTGGTTTGAT+GGG | 0.408271 | 8.2:-67630161 | MS.gene019657:CDS |
| CTTGACGAGCTTCGTGAAGA+TGG | 0.408980 | 8.2:+67628176 | None:intergenic |
| CACGGTGGGAATGTGGTAAC+TGG | 0.409472 | 8.2:-67630002 | MS.gene019657:CDS |
| TCCCTAAGATTGTAGATTGT+CGG | 0.412515 | 8.2:+67628239 | None:intergenic |
| AACTGAGGATGCGTCTGATT+TGG | 0.415902 | 8.2:-67629760 | MS.gene019657:CDS |
| GAATGAGTTGTTGTCGGGTC+AGG | 0.421751 | 8.2:-67630123 | MS.gene019657:CDS |
| TCATGCGGCTGCGCAGTTCC+AGG | 0.424066 | 8.2:-67627885 | MS.gene019657:CDS |
| TTCTCAATTTCTTGTCGAAA+GGG | 0.425727 | 8.2:-67627934 | MS.gene019657:CDS |
| TTACCATTGGCGTTTCGATA+AGG | 0.427484 | 8.2:-67627790 | MS.gene019657:CDS |
| TGTTTGTGATGGTGAGTTGT+GGG | 0.431433 | 8.2:-67630303 | MS.gene019657:CDS |
| TCCTGTCTTCCCCTTCCTAT+AGG | 0.432461 | 8.2:+67627909 | None:intergenic |
| TCCTATAGGAAGGGGAAGAC+AGG | 0.433625 | 8.2:-67627910 | MS.gene019657:CDS |
| AAAGCGATACTAAGTGGTTT+GGG | 0.433827 | 8.2:-67627986 | MS.gene019657:CDS |
| TTGGTGAAGAGCGGTGAGTC+TGG | 0.434679 | 8.2:-67629741 | MS.gene019657:CDS |
| TGATAATATTGTTCCGGTAG+TGG | 0.436711 | 8.2:-67629679 | MS.gene019657:CDS |
| ATACAGCCAATGGCCATACT+TGG | 0.437133 | 8.2:+67627961 | None:intergenic |
| AAACATTTCCTAACAAGAGC+AGG | 0.439152 | 8.2:-67627653 | MS.gene019657:CDS |
| GTGGAGGGCTTACAGTAATC+AGG | 0.440528 | 8.2:-67629517 | MS.gene019657:CDS |
| GTGGATTTGTCTGGTGGTGA+TGG | 0.450675 | 8.2:-67629660 | MS.gene019657:CDS |
| TGAGTTGTGGGATTTGGTTG+GGG | 0.451450 | 8.2:-67630291 | MS.gene019657:CDS |
| CTCTGTTTGATATGATGAGT+TGG | 0.453588 | 8.2:-67629602 | MS.gene019657:CDS |
| TTTGATGGGGTTTAAGGCTG+AGG | 0.456932 | 8.2:-67630147 | MS.gene019657:CDS |
| GTGAAGATGTTCGGAATTCG+TGG | 0.464902 | 8.2:-67627764 | MS.gene019657:CDS |
| GGTGGCTGGAGAGAAGGTTA+AGG | 0.466762 | 8.2:-67630090 | MS.gene019657:CDS |
| TATCGGTGATAATATTGTTC+CGG | 0.468339 | 8.2:-67629685 | MS.gene019657:CDS |
| GGTAACTGGAGAGAAGGTTA+AGG | 0.476059 | 8.2:-67629988 | MS.gene019657:CDS |
| GAGAGGATATGAACATTTCT+GGG | 0.477135 | 8.2:-67627688 | MS.gene019657:CDS |
| ATTCTCAATTTCTTGTCGAA+AGG | 0.481791 | 8.2:-67627935 | MS.gene019657:CDS |
| GTGGCTGGAGAGAAGGTTAA+GGG | 0.482398 | 8.2:-67630089 | MS.gene019657:CDS |
| GGACAGATGAAGACGAGAAA+AGG | 0.486764 | 8.2:-67627743 | MS.gene019657:CDS |
| CTGACACATTCAACAGAACC+TGG | 0.487585 | 8.2:+67627867 | None:intergenic |
| ATTGTTGTTGACGGGAAAGG+TGG | 0.490249 | 8.2:-67630335 | MS.gene019657:CDS |
| AACGCAAAGCATACCATAGC+AGG | 0.490321 | 8.2:-67627590 | MS.gene019657:CDS |
| TGTTCATATCCTCTCTTTGG+AGG | 0.491805 | 8.2:+67627696 | None:intergenic |
| CTGTTTGTGATGGTGAGTTG+TGG | 0.494879 | 8.2:-67630304 | MS.gene019657:CDS |
| GCATCGGCTCGCATCTGCGT+GGG | 0.496198 | 8.2:-67628056 | MS.gene019657:CDS |
| TCTGTTTGATATGATGAGTT+GGG | 0.500139 | 8.2:-67629601 | MS.gene019657:CDS |
| GTTCCGGTAGTGGATTTGTC+TGG | 0.501050 | 8.2:-67629669 | MS.gene019657:CDS |
| GAGAATCATGATGGTGATAT+CGG | 0.501429 | 8.2:-67629702 | MS.gene019657:CDS |
| TTGTCTGGTGGTGATGGAAG+TGG | 0.503537 | 8.2:-67629654 | MS.gene019657:CDS |
| GAGTCGTGTGTGATGAAAGT+TGG | 0.506590 | 8.2:-67630197 | MS.gene019657:CDS |
| GGGTTTGATGCTGTTTGTGA+TGG | 0.509454 | 8.2:-67630314 | MS.gene019657:CDS |
| TGGGACCCAAGTATGGCCAT+TGG | 0.513214 | 8.2:-67627967 | MS.gene019657:CDS |
| AGCTGTTGATTGTTGTTGAC+GGG | 0.513550 | 8.2:-67630343 | MS.gene019657:CDS |
| ATAAGGTCGGTGAAGATGTT+CGG | 0.518788 | 8.2:-67627773 | MS.gene019657:CDS |
| GAATCGAGAAATCCTACATC+GGG | 0.518984 | 8.2:+67629900 | None:intergenic |
| CAAGTCGTCGTGCTGTGAAA+CGG | 0.521739 | 8.2:-67628115 | MS.gene019657:CDS |
| GTAACTGGAGAGAAGGTTAA+GGG | 0.523633 | 8.2:-67629987 | MS.gene019657:CDS |
| GCTAAAGCTAAGCTGGAGTT+AGG | 0.528280 | 8.2:-67627822 | MS.gene019657:CDS |
| GAATGTGGTGGCTGGAGAGA+AGG | 0.530094 | 8.2:-67630096 | MS.gene019657:CDS |
| TCCGACAATCTACAATCTTA+GGG | 0.531884 | 8.2:-67628240 | MS.gene019657:CDS |
| TGAGGTGAATGAGTTGTTGT+CGG | 0.533812 | 8.2:-67630129 | MS.gene019657:CDS |
| AAGGTTAAGGGTGGAGCTGA+TGG | 0.534301 | 8.2:-67630077 | MS.gene019657:CDS |
| GAAGTGGTTCTAGTCTTAAG+AGG | 0.534929 | 8.2:-67629638 | MS.gene019657:CDS |
| CATTGAACAGCAAAATTGGC+AGG | 0.537300 | 8.2:-67629436 | MS.gene019657:intron |
| AATGAGTTGTTGTCGGGTCA+GGG | 0.537370 | 8.2:-67630122 | MS.gene019657:CDS |
| GATTTGGTTGGGGAAGAATG+TGG | 0.539468 | 8.2:-67630281 | MS.gene019657:CDS |
| CTGAGTGAGGGTAATGGTGA+TGG | 0.540918 | 8.2:-67629831 | MS.gene019657:CDS |
| CTTACAGTAATCAGGAGGCT+TGG | 0.542653 | 8.2:-67629509 | MS.gene019657:CDS |
| TAATCAGGAGGCTTGGAAGC+GGG | 0.543149 | 8.2:-67629502 | MS.gene019657:CDS |
| TGAGGGTAATGGTGATGGAA+TGG | 0.545924 | 8.2:-67629826 | MS.gene019657:CDS |
| GTGCGAATTTCGAGTCTAGT+GGG | 0.546249 | 8.2:-67630037 | MS.gene019657:CDS |
| GTGAAAGAAGTTCCCGATGT+AGG | 0.550596 | 8.2:-67629912 | MS.gene019657:CDS |
| AGTTCATCTGTGCTAGGCGA+AGG | 0.552705 | 8.2:-67628155 | MS.gene019657:CDS |
| GTCGGGTCAGGGTGGGAATG+TGG | 0.553223 | 8.2:-67630111 | MS.gene019657:CDS |
| TTACTGTAAGCCCTCCACTT+TGG | 0.553928 | 8.2:+67629522 | None:intergenic |
| CTTGTCGAAAGGGATCCTAT+AGG | 0.556633 | 8.2:-67627924 | MS.gene019657:CDS |
| ACGATCAAGTTATAGTAGAT+GGG | 0.556760 | 8.2:-67628078 | MS.gene019657:CDS |
| GCGGGTTCTGTTGTTTCGAG+AGG | 0.558329 | 8.2:-67629484 | MS.gene019657:CDS |
| TGAAGACGAGAAAAGGTTCA+GGG | 0.560005 | 8.2:-67627736 | MS.gene019657:CDS |
| TTGATTGTTGTTGACGGGAA+AGG | 0.563358 | 8.2:-67630338 | MS.gene019657:CDS |
| GATGGAGGGAAAATAACTGT+AGG | 0.564686 | 8.2:-67629786 | MS.gene019657:CDS |
| GGATTCGGAGCAGTCCACTC+TGG | 0.565588 | 8.2:+67628011 | None:intergenic |
| ATGGTCAGTGATACCGATGT+TGG | 0.565824 | 8.2:-67629858 | MS.gene019657:CDS |
| AAGCTGTTGATTGTTGTTGA+CGG | 0.566769 | 8.2:-67630344 | MS.gene019657:CDS |
| GAGGTGAATGAGTTGTTGTC+GGG | 0.568676 | 8.2:-67630128 | MS.gene019657:CDS |
| TCGTCAAGTTCATCTGTGCT+AGG | 0.569671 | 8.2:-67628161 | MS.gene019657:CDS |
| CAATCTACAATCTTAGGGAG+AGG | 0.570505 | 8.2:-67628235 | MS.gene019657:CDS |
| GCCTGAAAAGCCAAAGTGGA+GGG | 0.574127 | 8.2:-67629532 | MS.gene019657:CDS |
| AGAAATTCACGGTGGGAATG+TGG | 0.576328 | 8.2:-67630009 | MS.gene019657:CDS |
| TACAGCCAATGGCCATACTT+GGG | 0.577673 | 8.2:+67627962 | None:intergenic |
| GTGGGATCATCATACATGCT+AGG | 0.577985 | 8.2:+67628263 | None:intergenic |
| TTGTTGTTGACGGGAAAGGT+GGG | 0.578023 | 8.2:-67630334 | MS.gene019657:CDS |
| CATCGGCTCGCATCTGCGTG+GGG | 0.579313 | 8.2:-67628055 | MS.gene019657:CDS |
| ACTGGAGAGAAGGTTAAGGG+TGG | 0.579796 | 8.2:-67629984 | MS.gene019657:CDS |
| ATCTACAATCTTAGGGAGAG+GGG | 0.580993 | 8.2:-67628233 | MS.gene019657:CDS |
| AATCTACAATCTTAGGGAGA+GGG | 0.581096 | 8.2:-67628234 | MS.gene019657:CDS |
| GGAAAGCTGAGTGAGGGTAA+TGG | 0.581453 | 8.2:-67629837 | MS.gene019657:CDS |
| AAGTTATAGTAGATGGGCAT+CGG | 0.582631 | 8.2:-67628072 | MS.gene019657:CDS |
| TACCATAGCAGGCATACACT+TGG | 0.584083 | 8.2:-67627579 | MS.gene019657:CDS |
| AACATTTCCTAACAAGAGCA+GGG | 0.584542 | 8.2:-67627652 | MS.gene019657:CDS |
| CGACCTTATCGAAACGCCAA+TGG | 0.585564 | 8.2:+67627787 | None:intergenic |
| CTCACTCAGCTTTCCAACAT+CGG | 0.585605 | 8.2:+67629845 | None:intergenic |
| ATGGAGGGAAAATAACTGTA+GGG | 0.586968 | 8.2:-67629785 | MS.gene019657:CDS |
| GTTCATATCCTCTCTTTGGA+GGG | 0.587128 | 8.2:+67627697 | None:intergenic |
| TCGAAAGGGATCCTATAGGA+AGG | 0.587509 | 8.2:-67627920 | MS.gene019657:CDS |
| CGATGCCTGAAAAGCCAAAG+TGG | 0.588222 | 8.2:-67629536 | MS.gene019657:CDS |
| TTGATGAGTCTGGTTTGATG+GGG | 0.588528 | 8.2:-67630160 | MS.gene019657:CDS |
| GGGTCAGGGTGGGAATGTGG+TGG | 0.588589 | 8.2:-67630108 | MS.gene019657:CDS |
| GAATGTGGTAACTGGAGAGA+AGG | 0.588966 | 8.2:-67629994 | MS.gene019657:CDS |
| TTTCACAGCACGACGACTTG+TGG | 0.590229 | 8.2:+67628118 | None:intergenic |
| GAAAGGGATCCTATAGGAAG+GGG | 0.590844 | 8.2:-67627918 | MS.gene019657:CDS |
| ATCCTGAAAGCGATACTAAG+TGG | 0.591141 | 8.2:-67627992 | MS.gene019657:CDS |
| CCACCAGACAAATCCACTAC+CGG | 0.592047 | 8.2:+67629666 | None:intergenic |
| CGAAAGGGATCCTATAGGAA+GGG | 0.595912 | 8.2:-67627919 | MS.gene019657:CDS |
| AGTTGTTGTCGGGTCAGGGT+GGG | 0.598266 | 8.2:-67630118 | MS.gene019657:CDS |
| GGCATCGGCTCGCATCTGCG+TGG | 0.600636 | 8.2:-67628057 | MS.gene019657:CDS |
| GTAATCAGGAGGCTTGGAAG+CGG | 0.600886 | 8.2:-67629503 | MS.gene019657:CDS |
| GAGTCTGGATTGCTGAATGT+TGG | 0.602152 | 8.2:-67629726 | MS.gene019657:CDS |
| AGATTGTAGATTGTCGGAGT+GGG | 0.602178 | 8.2:+67628245 | None:intergenic |
| CACCAAGTGTATGCCTGCTA+TGG | 0.604240 | 8.2:+67627577 | None:intergenic |
| TAGTCTTAAGAGGAAGAGAG+AGG | 0.607309 | 8.2:-67629628 | MS.gene019657:CDS |
| CATTGGCGTTTCGATAAGGT+CGG | 0.607511 | 8.2:-67627786 | MS.gene019657:CDS |
| AGTGGGGAGAAAGAAATTCA+CGG | 0.609700 | 8.2:-67630020 | MS.gene019657:CDS |
| CGATGTTGGAAAGCTGAGTG+AGG | 0.609819 | 8.2:-67629844 | MS.gene019657:CDS |
| TAGGCGAAGGAGATTTGGAC+GGG | 0.612279 | 8.2:-67628142 | MS.gene019657:CDS |
| AGTGCGAATTTCGAGTCTAG+TGG | 0.613148 | 8.2:-67630038 | MS.gene019657:CDS |
| AGCTAAGCTGGAGTTAGGCG+TGG | 0.617435 | 8.2:-67627817 | MS.gene019657:CDS |
| ATTCCAGAATGATGAATCGA+GGG | 0.617833 | 8.2:-67629881 | MS.gene019657:CDS |
| GATGAAAGTTGGTGATGCTA+AGG | 0.617892 | 8.2:-67630186 | MS.gene019657:CDS |
| TGCCTGAAAAGCCAAAGTGG+AGG | 0.624771 | 8.2:-67629533 | MS.gene019657:CDS |
| CAGCTTTACCCTCCAAAGAG+AGG | 0.627360 | 8.2:-67627705 | MS.gene019657:CDS |
| CCGGTAGTGGATTTGTCTGG+TGG | 0.629270 | 8.2:-67629666 | MS.gene019657:CDS |
| GGAACAATTTCAGGATCACA+AGG | 0.631056 | 8.2:+67629558 | None:intergenic |
| CAGAATGATGAATCGAGGGA+TGG | 0.631748 | 8.2:-67629877 | MS.gene019657:CDS |
| GGAATCGAGAAATCCTACAT+CGG | 0.631911 | 8.2:+67629899 | None:intergenic |
| TCTACAATCTTAGGGAGAGG+GGG | 0.633262 | 8.2:-67628232 | MS.gene019657:CDS |
| ATCAAGCTGAAGTGCCAGAG+TGG | 0.634304 | 8.2:-67628025 | MS.gene019657:CDS |
| TCTTAAGAGGAAGAGAGAGG+AGG | 0.635943 | 8.2:-67629625 | MS.gene019657:CDS |
| CTAGGCGAAGGAGATTTGGA+CGG | 0.640028 | 8.2:-67628143 | MS.gene019657:CDS |
| AAGATTGTAGATTGTCGGAG+TGG | 0.640461 | 8.2:+67628244 | None:intergenic |
| GATTCCAGAATGATGAATCG+AGG | 0.640790 | 8.2:-67629882 | MS.gene019657:CDS |
| GAGTTGTTGTCGGGTCAGGG+TGG | 0.642746 | 8.2:-67630119 | MS.gene019657:CDS |
| TGAGAATTCGATACAGCCAA+TGG | 0.643809 | 8.2:+67627951 | None:intergenic |
| GGGAGAAAGAAATTCACGGT+GGG | 0.651200 | 8.2:-67630016 | MS.gene019657:CDS |
| GATGTTGGAAAGCTGAGTGA+GGG | 0.661886 | 8.2:-67629843 | MS.gene019657:CDS |
| TGCGAATTTCGAGTCTAGTG+GGG | 0.671840 | 8.2:-67630036 | MS.gene019657:CDS |
| TGTGGCTTAGGTGTTAACGT+TGG | 0.673988 | 8.2:-67630263 | MS.gene019657:CDS |
| AGGGGAAGACAGGATTCATG+CGG | 0.683109 | 8.2:-67627900 | MS.gene019657:CDS |
| AATGTTGGCGAGAATCATGA+TGG | 0.684957 | 8.2:-67629711 | MS.gene019657:CDS |
| TGGAGCTGATGGTGCTAACG+AGG | 0.694652 | 8.2:-67630066 | MS.gene019657:CDS |
| GCTGGAGAGAAGGTTAAGGG+TGG | 0.695646 | 8.2:-67630086 | MS.gene019657:CDS |
| TGGAGTTGATGGTGCTAACG+AGG | 0.697135 | 8.2:-67629964 | MS.gene019657:CDS |
| GCGTCTGATTTGGTGAAGAG+CGG | 0.702691 | 8.2:-67629750 | MS.gene019657:CDS |
| GAGGGCTTACAGTAATCAGG+AGG | 0.703144 | 8.2:-67629514 | MS.gene019657:CDS |
| AGGATCACAAGGGTTACTCG+CGG | 0.705433 | 8.2:+67629569 | None:intergenic |
| GAACAATTTCAGGATCACAA+GGG | 0.713883 | 8.2:+67629559 | None:intergenic |
| AATAACTGTAGGGACAACTG+AGG | 0.724458 | 8.2:-67629775 | MS.gene019657:CDS |
| GGGGAGAAAGAAATTCACGG+TGG | 0.772176 | 8.2:-67630017 | MS.gene019657:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTAAAGCAATTTAAGTT+TGG | + | chr8.2:67628514-67628533 | None:intergenic | 15.0% |
| !! | ACAAAATTAAATCATGATGA+AGG | + | chr8.2:67629019-67629038 | None:intergenic | 20.0% |
| !! | ATGACTTATTAAATTTCATG+TGG | - | chr8.2:67628892-67628911 | MS.gene019657:intron | 20.0% |
| !! | TGACTTATTAAATTTCATGT+GGG | - | chr8.2:67628893-67628912 | MS.gene019657:intron | 20.0% |
| !! | TTTCATGTGTAAATGATAAT+TGG | - | chr8.2:67628712-67628731 | MS.gene019657:intron | 20.0% |
| !!! | CGTATTTTTTAGAGTAATAA+AGG | - | chr8.2:67629483-67629502 | MS.gene019657:CDS | 20.0% |
| !!! | GTTTTTAGTTAGTTAATGTT+GGG | - | chr8.2:67629223-67629242 | MS.gene019657:intron | 20.0% |
| !!! | TCTTATTTTGAGCAAATAAT+TGG | - | chr8.2:67628744-67628763 | MS.gene019657:intron | 20.0% |
| !!! | TGTTGTTGTTATATTAAAAG+TGG | - | chr8.2:67629307-67629326 | MS.gene019657:intron | 20.0% |
| !!! | TGTTTTTAGTTAGTTAATGT+TGG | - | chr8.2:67629222-67629241 | MS.gene019657:intron | 20.0% |
| ! | AACAGTTGACATTAAAACTT+GGG | + | chr8.2:67628815-67628834 | None:intergenic | 25.0% |
| ! | AAGTATCTAAATTGAATTGC+AGG | - | chr8.2:67629445-67629464 | MS.gene019657:CDS | 25.0% |
| ! | AATAACACACCTTAATAGTA+AGG | + | chr8.2:67629288-67629307 | None:intergenic | 25.0% |
| ! | AGTAATAAAGGTTTATTAGC+TGG | - | chr8.2:67629495-67629514 | MS.gene019657:CDS | 25.0% |
| ! | ATGGTTAACTTATGCATTTA+TGG | - | chr8.2:67629371-67629390 | MS.gene019657:intron | 25.0% |
| ! | ATTCAGTTTCCTTACTATTA+AGG | - | chr8.2:67629276-67629295 | MS.gene019657:intron | 25.0% |
| ! | GAAATTTAATAAGTCATCAG+TGG | + | chr8.2:67628889-67628908 | None:intergenic | 25.0% |
| ! | GCTTGAAATTTAGTAAACTT+GGG | - | chr8.2:67628555-67628574 | MS.gene019657:intron | 25.0% |
| ! | GTTAATGCAAAAGGAAATTT+AGG | + | chr8.2:67629566-67629585 | None:intergenic | 25.0% |
| ! | TAACAGTTGACATTAAAACT+TGG | + | chr8.2:67628816-67628835 | None:intergenic | 25.0% |
| ! | TGCTTGAAATTTAGTAAACT+TGG | - | chr8.2:67628554-67628573 | MS.gene019657:intron | 25.0% |
| ! | TGGTTAACTTATGCATTTAT+GGG | - | chr8.2:67629372-67629391 | MS.gene019657:intron | 25.0% |
| ! | TTGTTATATTAAAAGTGGCA+AGG | - | chr8.2:67629312-67629331 | MS.gene019657:intron | 25.0% |
| !! | GAGATATTGTCATAGTATTT+TGG | - | chr8.2:67629155-67629174 | MS.gene019657:intron | 25.0% |
| !! | TGCAAAATTATACAAGGTTT+TGG | + | chr8.2:67629590-67629609 | None:intergenic | 25.0% |
| !!! | AGTTAACCATGCTTTAAAAA+AGG | + | chr8.2:67629361-67629380 | None:intergenic | 25.0% |
| !!! | GTTAACCATGCTTTAAAAAA+GGG | + | chr8.2:67629360-67629379 | None:intergenic | 25.0% |
| AAATGTTCATATCCTCTCTT+TGG | + | chr8.2:67630199-67630218 | None:intergenic | 30.0% | |
| AATGTATGCTATCCCAAAAA+GGG | + | chr8.2:67629398-67629417 | None:intergenic | 30.0% | |
| ACGATCAAGTTATAGTAGAT+GGG | - | chr8.2:67629811-67629830 | MS.gene019657:CDS | 30.0% | |
| ATGCTAATGTGATGTGTATT+TGG | - | chr8.2:67629071-67629090 | MS.gene019657:intron | 30.0% | |
| ATTCTCAATTTCTTGTCGAA+AGG | - | chr8.2:67629954-67629973 | MS.gene019657:CDS | 30.0% | |
| TATCGGTGATAATATTGTTC+CGG | - | chr8.2:67628204-67628223 | MS.gene019657:CDS | 30.0% | |
| TCTGTTTGATATGATGAGTT+GGG | - | chr8.2:67628288-67628307 | MS.gene019657:intron | 30.0% | |
| TGACTCTGCAAAATTATACA+AGG | + | chr8.2:67629596-67629615 | None:intergenic | 30.0% | |
| TGCTAATGTGATGTGTATTT+GGG | - | chr8.2:67629072-67629091 | MS.gene019657:intron | 30.0% | |
| TTCTCAATTTCTTGTCGAAA+GGG | - | chr8.2:67629955-67629974 | MS.gene019657:CDS | 30.0% | |
| ! | CAATTTAAGTTTGGCTAACT+CGG | + | chr8.2:67628505-67628524 | None:intergenic | 30.0% |
| ! | GAAGTAGTTGAAGATTTTGA+TGG | - | chr8.2:67628085-67628104 | MS.gene019657:CDS | 30.0% |
| ! | TGTAATTGTTCTGTTTCTCA+AGG | - | chr8.2:67628680-67628699 | MS.gene019657:intron | 30.0% |
| !! | ACAGTTTCATTTAGTTTGCT+GGG | - | chr8.2:67628835-67628854 | MS.gene019657:intron | 30.0% |
| !! | TACAGTTTCATTTAGTTTGC+TGG | - | chr8.2:67628834-67628853 | MS.gene019657:intron | 30.0% |
| !! | TAGTTGAAGATTTTGATGGA+GGG | - | chr8.2:67628089-67628108 | MS.gene019657:CDS | 30.0% |
| !! | TCTGATTTGAAGAAGCTTTT+TGG | - | chr8.2:67630364-67630383 | MS.gene019657:CDS | 30.0% |
| !!! | AATATCTCAGCGTTTTTTTC+CGG | + | chr8.2:67629143-67629162 | None:intergenic | 30.0% |
| !!! | TAGCTTTTTTCTCAGAAATG+TGG | + | chr8.2:67630051-67630070 | None:intergenic | 30.0% |
| AAACATTTCCTAACAAGAGC+AGG | - | chr8.2:67630236-67630255 | MS.gene019657:CDS | 35.0% | |
| AAAGCGATACTAAGTGGTTT+GGG | - | chr8.2:67629903-67629922 | MS.gene019657:CDS | 35.0% | |
| AACATTTCCTAACAAGAGCA+GGG | - | chr8.2:67630237-67630256 | MS.gene019657:CDS | 35.0% | |
| AAGTTATAGTAGATGGGCAT+CGG | - | chr8.2:67629817-67629836 | MS.gene019657:CDS | 35.0% | |
| AATCTACAATCTTAGGGAGA+GGG | - | chr8.2:67629655-67629674 | MS.gene019657:CDS | 35.0% | |
| AATGTGATGTGTATTTGGGT+GGG | - | chr8.2:67629076-67629095 | MS.gene019657:intron | 35.0% | |
| AGAGAGGATATGAACATTTC+TGG | - | chr8.2:67630200-67630219 | MS.gene019657:CDS | 35.0% | |
| ATGGAGGGAAAATAACTGTA+GGG | - | chr8.2:67628104-67628123 | MS.gene019657:CDS | 35.0% | |
| ATTCCAGAATGATGAATCGA+GGG | - | chr8.2:67628008-67628027 | MS.gene019657:CDS | 35.0% | |
| CAATGTATGCTATCCCAAAA+AGG | + | chr8.2:67629399-67629418 | None:intergenic | 35.0% | |
| CTCTGTTTGATATGATGAGT+TGG | - | chr8.2:67628287-67628306 | MS.gene019657:intron | 35.0% | |
| GAAAAAAGCTAAAGCTAAGC+TGG | - | chr8.2:67630060-67630079 | MS.gene019657:CDS | 35.0% | |
| GAACAATTTCAGGATCACAA+GGG | + | chr8.2:67628333-67628352 | None:intergenic | 35.0% | |
| GACGATCAAGTTATAGTAGA+TGG | - | chr8.2:67629810-67629829 | MS.gene019657:CDS | 35.0% | |
| GAGAGGATATGAACATTTCT+GGG | - | chr8.2:67630201-67630220 | MS.gene019657:CDS | 35.0% | |
| GCAAACATTCTCACCATTAT+GGG | - | chr8.2:67629334-67629353 | MS.gene019657:intron | 35.0% | |
| TAATGTGATGTGTATTTGGG+TGG | - | chr8.2:67629075-67629094 | MS.gene019657:intron | 35.0% | |
| TCCCTAAGATTGTAGATTGT+CGG | + | chr8.2:67629653-67629672 | None:intergenic | 35.0% | |
| TCCGACAATCTACAATCTTA+GGG | - | chr8.2:67629649-67629668 | MS.gene019657:CDS | 35.0% | |
| TGATAATATTGTTCCGGTAG+TGG | - | chr8.2:67628210-67628229 | MS.gene019657:CDS | 35.0% | |
| TTAGTATCGCTTTCAGGATT+CGG | + | chr8.2:67629896-67629915 | None:intergenic | 35.0% | |
| ! | AAGCTGTTGATTGTTGTTGA+CGG | - | chr8.2:67627545-67627564 | MS.gene019657:CDS | 35.0% |
| ! | ACTTGTCAGTTTTTCATGTG+GGG | - | chr8.2:67628919-67628938 | MS.gene019657:intron | 35.0% |
| ! | CACTTGTCAGTTTTTCATGT+GGG | - | chr8.2:67628918-67628937 | MS.gene019657:intron | 35.0% |
| ! | CTTTAAAAAAGGGCCCATAA+TGG | + | chr8.2:67629350-67629369 | None:intergenic | 35.0% |
| ! | GAGAATCATGATGGTGATAT+CGG | - | chr8.2:67628187-67628206 | MS.gene019657:CDS | 35.0% |
| ! | GCATTTGTTAGTTGTTACTG+TGG | - | chr8.2:67628769-67628788 | MS.gene019657:intron | 35.0% |
| ! | TTTGATGAGTCTGGTTTGAT+GGG | - | chr8.2:67627728-67627747 | MS.gene019657:CDS | 35.0% |
| !! | AAGAGTGTGAATTTTGAGTC+TGG | - | chr8.2:67627950-67627969 | MS.gene019657:CDS | 35.0% |
| !! | AGTTTCATTTAGTTTGCTGG+GGG | - | chr8.2:67628837-67628856 | MS.gene019657:intron | 35.0% |
| !! | CAGTTTCATTTAGTTTGCTG+GGG | - | chr8.2:67628836-67628855 | MS.gene019657:intron | 35.0% |
| !! | GTAGTTGAAGATTTTGATGG+AGG | - | chr8.2:67628088-67628107 | MS.gene019657:CDS | 35.0% |
| !!! | GGTTTTGGTGTTAATGCAAA+AGG | + | chr8.2:67629575-67629594 | None:intergenic | 35.0% |
| AAAGTTTCCCTGCTCTTGTT+AGG | + | chr8.2:67630247-67630266 | None:intergenic | 40.0% | |
| AACCACTTAGTATCGCTTTC+AGG | + | chr8.2:67629902-67629921 | None:intergenic | 40.0% | |
| AAGATTGTAGATTGTCGGAG+TGG | + | chr8.2:67629648-67629667 | None:intergenic | 40.0% | |
| AATAACTGTAGGGACAACTG+AGG | - | chr8.2:67628114-67628133 | MS.gene019657:CDS | 40.0% | |
| AATGTTGGCGAGAATCATGA+TGG | - | chr8.2:67628178-67628197 | MS.gene019657:CDS | 40.0% | |
| AGATTGTAGATTGTCGGAGT+GGG | + | chr8.2:67629647-67629666 | None:intergenic | 40.0% | |
| AGTGGGGAGAAAGAAATTCA+CGG | - | chr8.2:67627869-67627888 | MS.gene019657:CDS | 40.0% | |
| ATAAGGTCGGTGAAGATGTT+CGG | - | chr8.2:67630116-67630135 | MS.gene019657:CDS | 40.0% | |
| ATCCTGAAAGCGATACTAAG+TGG | - | chr8.2:67629897-67629916 | MS.gene019657:CDS | 40.0% | |
| ATCTACAATCTTAGGGAGAG+GGG | - | chr8.2:67629656-67629675 | MS.gene019657:CDS | 40.0% | |
| ATGAAGACGAGAAAAGGTTC+AGG | - | chr8.2:67630152-67630171 | MS.gene019657:CDS | 40.0% | |
| ATGTGATGTGTATTTGGGTG+GGG | - | chr8.2:67629077-67629096 | MS.gene019657:intron | 40.0% | |
| ATTTGGGTGGGGAAAATTGT+TGG | - | chr8.2:67629088-67629107 | MS.gene019657:intron | 40.0% | |
| CAATCTACAATCTTAGGGAG+AGG | - | chr8.2:67629654-67629673 | MS.gene019657:CDS | 40.0% | |
| CATTGAACAGCAAAATTGGC+AGG | - | chr8.2:67628453-67628472 | MS.gene019657:intron | 40.0% | |
| CCACATGAAAAACTGACAAG+TGG | + | chr8.2:67628920-67628939 | None:intergenic | 40.0% | |
| CTCCGACAATCTACAATCTT+AGG | - | chr8.2:67629648-67629667 | MS.gene019657:CDS | 40.0% | |
| GAAAGCGATACTAAGTGGTT+TGG | - | chr8.2:67629902-67629921 | MS.gene019657:CDS | 40.0% | |
| GAATCGAGAAATCCTACATC+GGG | + | chr8.2:67627992-67628011 | None:intergenic | 40.0% | |
| GATGGAGGGAAAATAACTGT+AGG | - | chr8.2:67628103-67628122 | MS.gene019657:CDS | 40.0% | |
| GATTCCAGAATGATGAATCG+AGG | - | chr8.2:67628007-67628026 | MS.gene019657:CDS | 40.0% | |
| GGAACAATTTCAGGATCACA+AGG | + | chr8.2:67628334-67628353 | None:intergenic | 40.0% | |
| GGAATCGAGAAATCCTACAT+CGG | + | chr8.2:67627993-67628012 | None:intergenic | 40.0% | |
| GGCAAACATTCTCACCATTA+TGG | - | chr8.2:67629333-67629352 | MS.gene019657:intron | 40.0% | |
| GTAACTGGAGAGAAGGTTAA+GGG | - | chr8.2:67627902-67627921 | MS.gene019657:CDS | 40.0% | |
| GTTCATATCCTCTCTTTGGA+GGG | + | chr8.2:67630195-67630214 | None:intergenic | 40.0% | |
| TGAAGACGAGAAAAGGTTCA+GGG | - | chr8.2:67630153-67630172 | MS.gene019657:CDS | 40.0% | |
| TGAGAATTCGATACAGCCAA+TGG | + | chr8.2:67629941-67629960 | None:intergenic | 40.0% | |
| TGAGGTGAATGAGTTGTTGT+CGG | - | chr8.2:67627760-67627779 | MS.gene019657:CDS | 40.0% | |
| TGTTCATATCCTCTCTTTGG+AGG | + | chr8.2:67630196-67630215 | None:intergenic | 40.0% | |
| TTACCATTGGCGTTTCGATA+AGG | - | chr8.2:67630099-67630118 | MS.gene019657:CDS | 40.0% | |
| ! | AGCTGTTGATTGTTGTTGAC+GGG | - | chr8.2:67627546-67627565 | MS.gene019657:CDS | 40.0% |
| ! | ATGCATTTATGGGCCCTTTT+TGG | - | chr8.2:67629382-67629401 | MS.gene019657:intron | 40.0% |
| ! | CCACTTGTCAGTTTTTCATG+TGG | - | chr8.2:67628917-67628936 | MS.gene019657:intron | 40.0% |
| ! | GTTTGATGAGTCTGGTTTGA+TGG | - | chr8.2:67627727-67627746 | MS.gene019657:CDS | 40.0% |
| ! | TAGTCTTAAGAGGAAGAGAG+AGG | - | chr8.2:67628261-67628280 | MS.gene019657:CDS | 40.0% |
| ! | TGAAGAAGCTTTTTGGACGT+CGG | - | chr8.2:67630371-67630390 | MS.gene019657:CDS | 40.0% |
| ! | TGCATTTATGGGCCCTTTTT+GGG | - | chr8.2:67629383-67629402 | MS.gene019657:intron | 40.0% |
| ! | TGTTTGTGATGGTGAGTTGT+GGG | - | chr8.2:67627586-67627605 | MS.gene019657:CDS | 40.0% |
| ! | TTGATGAGTCTGGTTTGATG+GGG | - | chr8.2:67627729-67627748 | MS.gene019657:CDS | 40.0% |
| ! | TTGATTGTTGTTGACGGGAA+AGG | - | chr8.2:67627551-67627570 | MS.gene019657:CDS | 40.0% |
| !! | AGTGTGAATTTTGAGTCTGG+TGG | - | chr8.2:67627953-67627972 | MS.gene019657:CDS | 40.0% |
| !! | CGAGCATTGAACAGCAAAAT+TGG | - | chr8.2:67628449-67628468 | MS.gene019657:intron | 40.0% |
| !! | GAAGTGGTTCTAGTCTTAAG+AGG | - | chr8.2:67628251-67628270 | MS.gene019657:CDS | 40.0% |
| !! | GATAGCATACATTGACTTGC+AGG | - | chr8.2:67629405-67629424 | MS.gene019657:intron | 40.0% |
| !! | GATGAAAGTTGGTGATGCTA+AGG | - | chr8.2:67627703-67627722 | MS.gene019657:CDS | 40.0% |
| !! | GTGTGAATTTTGAGTCTGGT+GGG | - | chr8.2:67627954-67627973 | MS.gene019657:CDS | 40.0% |
| !! | GTTTCATTTAGTTTGCTGGG+GGG | - | chr8.2:67628838-67628857 | MS.gene019657:intron | 40.0% |
| !! | TGTGAATTTTGAGTCTGGTG+GGG | - | chr8.2:67627955-67627974 | MS.gene019657:CDS | 40.0% |
| !!! | ATGGGCCCTTTTTTAAAGCA+TGG | - | chr8.2:67629352-67629371 | MS.gene019657:intron | 40.0% |
| AACGCAAAGCATACCATAGC+AGG | - | chr8.2:67630299-67630318 | MS.gene019657:CDS | 45.0% | |
| AACTGAGGATGCGTCTGATT+TGG | - | chr8.2:67628129-67628148 | MS.gene019657:CDS | 45.0% | |
| AAGGTTAAGGGTGGAGTTGA+TGG | - | chr8.2:67627914-67627933 | MS.gene019657:CDS | 45.0% | |
| AATGAGTTGTTGTCGGGTCA+GGG | - | chr8.2:67627767-67627786 | MS.gene019657:CDS | 45.0% | |
| AGAAATTCACGGTGGGAATG+TGG | - | chr8.2:67627880-67627899 | MS.gene019657:CDS | 45.0% | |
| ATACAGCCAATGGCCATACT+TGG | + | chr8.2:67629931-67629950 | None:intergenic | 45.0% | |
| ATGGTCAGTGATACCGATGT+TGG | - | chr8.2:67628031-67628050 | MS.gene019657:CDS | 45.0% | |
| CAGAATGATGAATCGAGGGA+TGG | - | chr8.2:67628012-67628031 | MS.gene019657:CDS | 45.0% | |
| CATCCCTCGATTCATCATTC+TGG | + | chr8.2:67628014-67628033 | None:intergenic | 45.0% | |
| CATTGGCGTTTCGATAAGGT+CGG | - | chr8.2:67630103-67630122 | MS.gene019657:CDS | 45.0% | |
| CGAAAGGGATCCTATAGGAA+GGG | - | chr8.2:67629970-67629989 | MS.gene019657:CDS | 45.0% | |
| CTCACTCAGCTTTCCAACAT+CGG | + | chr8.2:67628047-67628066 | None:intergenic | 45.0% | |
| CTGACACATTCAACAGAACC+TGG | + | chr8.2:67630025-67630044 | None:intergenic | 45.0% | |
| CTTACAGTAATCAGGAGGCT+TGG | - | chr8.2:67628380-67628399 | MS.gene019657:intron | 45.0% | |
| CTTGTCGAAAGGGATCCTAT+AGG | - | chr8.2:67629965-67629984 | MS.gene019657:CDS | 45.0% | |
| GAAAGGGATCCTATAGGAAG+GGG | - | chr8.2:67629971-67629990 | MS.gene019657:CDS | 45.0% | |
| GAATGTGGTAACTGGAGAGA+AGG | - | chr8.2:67627895-67627914 | MS.gene019657:CDS | 45.0% | |
| GAGGTGAATGAGTTGTTGTC+GGG | - | chr8.2:67627761-67627780 | MS.gene019657:CDS | 45.0% | |
| GAGTCGTGTGTGATGAAAGT+TGG | - | chr8.2:67627692-67627711 | MS.gene019657:CDS | 45.0% | |
| GAGTCTGGATTGCTGAATGT+TGG | - | chr8.2:67628163-67628182 | MS.gene019657:CDS | 45.0% | |
| GATGTTGGAAAGCTGAGTGA+GGG | - | chr8.2:67628046-67628065 | MS.gene019657:CDS | 45.0% | |
| GCTAAAGCTAAGCTGGAGTT+AGG | - | chr8.2:67630067-67630086 | MS.gene019657:CDS | 45.0% | |
| GGACAGATGAAGACGAGAAA+AGG | - | chr8.2:67630146-67630165 | MS.gene019657:CDS | 45.0% | |
| GGGAGAAAGAAATTCACGGT+GGG | - | chr8.2:67627873-67627892 | MS.gene019657:CDS | 45.0% | |
| GGTAACTGGAGAGAAGGTTA+AGG | - | chr8.2:67627901-67627920 | MS.gene019657:CDS | 45.0% | |
| GTGAAAGAAGTTCCCGATGT+AGG | - | chr8.2:67627977-67627996 | MS.gene019657:CDS | 45.0% | |
| GTGAAGATGTTCGGAATTCG+TGG | - | chr8.2:67630125-67630144 | MS.gene019657:CDS | 45.0% | |
| GTGGGATCATCATACATGCT+AGG | + | chr8.2:67629629-67629648 | None:intergenic | 45.0% | |
| GTTTGCTTGATCGTTGATGC+CGG | - | chr8.2:67629121-67629140 | MS.gene019657:intron | 45.0% | |
| TACAGCCAATGGCCATACTT+GGG | + | chr8.2:67629930-67629949 | None:intergenic | 45.0% | |
| TACCATAGCAGGCATACACT+TGG | - | chr8.2:67630310-67630329 | MS.gene019657:CDS | 45.0% | |
| TATGGTATGCTTTGCGTTGC+AGG | + | chr8.2:67630297-67630316 | None:intergenic | 45.0% | |
| TCGAAAGGGATCCTATAGGA+AGG | - | chr8.2:67629969-67629988 | MS.gene019657:CDS | 45.0% | |
| TCGTCAAGTTCATCTGTGCT+AGG | - | chr8.2:67629728-67629747 | MS.gene019657:CDS | 45.0% | |
| TCTACAATCTTAGGGAGAGG+GGG | - | chr8.2:67629657-67629676 | MS.gene019657:CDS | 45.0% | |
| TCTTAAGAGGAAGAGAGAGG+AGG | - | chr8.2:67628264-67628283 | MS.gene019657:CDS | 45.0% | |
| TGTGGCTTAGGTGTTAACGT+TGG | - | chr8.2:67627626-67627645 | MS.gene019657:CDS | 45.0% | |
| TTACTGTAAGCCCTCCACTT+TGG | + | chr8.2:67628370-67628389 | None:intergenic | 45.0% | |
| ! | AAGAAGCTTTTTGGACGTCG+GGG | - | chr8.2:67630373-67630392 | MS.gene019657:CDS | 45.0% |
| ! | AGTGCGAATTTCGAGTCTAG+TGG | - | chr8.2:67627851-67627870 | MS.gene019657:CDS | 45.0% |
| ! | ATTGTTGTTGACGGGAAAGG+TGG | - | chr8.2:67627554-67627573 | MS.gene019657:CDS | 45.0% |
| ! | CTGTTTGTGATGGTGAGTTG+TGG | - | chr8.2:67627585-67627604 | MS.gene019657:CDS | 45.0% |
| ! | GAAGAAGCTTTTTGGACGTC+GGG | - | chr8.2:67630372-67630391 | MS.gene019657:CDS | 45.0% |
| ! | GATTTGGTTGGGGAAGAATG+TGG | - | chr8.2:67627608-67627627 | MS.gene019657:CDS | 45.0% |
| ! | GCTAAGGTGTTTGATGAGTC+TGG | - | chr8.2:67627719-67627738 | MS.gene019657:CDS | 45.0% |
| ! | GGGTTTGATGCTGTTTGTGA+TGG | - | chr8.2:67627575-67627594 | MS.gene019657:CDS | 45.0% |
| ! | GTCTGGTTTGATGGGGTTTA+AGG | - | chr8.2:67627736-67627755 | MS.gene019657:CDS | 45.0% |
| ! | GTGAGTTGTGGGATTTGGTT+GGG | - | chr8.2:67627597-67627616 | MS.gene019657:CDS | 45.0% |
| ! | GTGCGAATTTCGAGTCTAGT+GGG | - | chr8.2:67627852-67627871 | MS.gene019657:CDS | 45.0% |
| ! | TAGGCGTGGCTTTTTACCAT+TGG | - | chr8.2:67630086-67630105 | MS.gene019657:CDS | 45.0% |
| ! | TGAGTTGTGGGATTTGGTTG+GGG | - | chr8.2:67627598-67627617 | MS.gene019657:CDS | 45.0% |
| ! | TGATGGTGAGTTGTGGGATT+TGG | - | chr8.2:67627592-67627611 | MS.gene019657:CDS | 45.0% |
| ! | TGCGAATTTCGAGTCTAGTG+GGG | - | chr8.2:67627853-67627872 | MS.gene019657:CDS | 45.0% |
| ! | TTGTTGTTGACGGGAAAGGT+GGG | - | chr8.2:67627555-67627574 | MS.gene019657:CDS | 45.0% |
| ! | TTTGATGGGGTTTAAGGCTG+AGG | - | chr8.2:67627742-67627761 | MS.gene019657:CDS | 45.0% |
| !! | TCAGGCATCGGAACAATTTC+AGG | + | chr8.2:67628343-67628362 | None:intergenic | 45.0% |
| !! | TGAGGGTAATGGTGATGGAA+TGG | - | chr8.2:67628063-67628082 | MS.gene019657:CDS | 45.0% |
| !!! | CACTTTGGCTTTTCAGGCAT+CGG | + | chr8.2:67628355-67628374 | None:intergenic | 45.0% |
| AAGGTTAAGGGTGGAGCTGA+TGG | - | chr8.2:67627812-67627831 | MS.gene019657:CDS | 50.0% | |
| ACTGGAGAGAAGGTTAAGGG+TGG | - | chr8.2:67627905-67627924 | MS.gene019657:CDS | 50.0% | |
| AGGATCACAAGGGTTACTCG+CGG | + | chr8.2:67628323-67628342 | None:intergenic | 50.0% | |
| AGGGGAAGACAGGATTCATG+CGG | - | chr8.2:67629989-67630008 | MS.gene019657:CDS | 50.0% | |
| AGTTCATCTGTGCTAGGCGA+AGG | - | chr8.2:67629734-67629753 | MS.gene019657:CDS | 50.0% | |
| CAAGTCGTCGTGCTGTGAAA+CGG | - | chr8.2:67629774-67629793 | MS.gene019657:CDS | 50.0% | |
| CACCAAGTGTATGCCTGCTA+TGG | + | chr8.2:67630315-67630334 | None:intergenic | 50.0% | |
| CAGCTTTACCCTCCAAAGAG+AGG | - | chr8.2:67630184-67630203 | MS.gene019657:CDS | 50.0% | |
| CCACCAGACAAATCCACTAC+CGG | + | chr8.2:67628226-67628245 | None:intergenic | 50.0% | |
| CGACCTTATCGAAACGCCAA+TGG | + | chr8.2:67630105-67630124 | None:intergenic | 50.0% | |
| CGATGCCTGAAAAGCCAAAG+TGG | - | chr8.2:67628353-67628372 | MS.gene019657:intron | 50.0% | |
| CGATGTTGGAAAGCTGAGTG+AGG | - | chr8.2:67628045-67628064 | MS.gene019657:CDS | 50.0% | |
| CTAGGCGAAGGAGATTTGGA+CGG | - | chr8.2:67629746-67629765 | MS.gene019657:CDS | 50.0% | |
| CTTGACGAGCTTCGTGAAGA+TGG | + | chr8.2:67629716-67629735 | None:intergenic | 50.0% | |
| GAATGAGTTGTTGTCGGGTC+AGG | - | chr8.2:67627766-67627785 | MS.gene019657:CDS | 50.0% | |
| GAGGGCTTACAGTAATCAGG+AGG | - | chr8.2:67628375-67628394 | MS.gene019657:intron | 50.0% | |
| GCCTGAAAAGCCAAAGTGGA+GGG | - | chr8.2:67628357-67628376 | MS.gene019657:intron | 50.0% | |
| GGAAAGCTGAGTGAGGGTAA+TGG | - | chr8.2:67628052-67628071 | MS.gene019657:CDS | 50.0% | |
| GGGGAGAAAGAAATTCACGG+TGG | - | chr8.2:67627872-67627891 | MS.gene019657:CDS | 50.0% | |
| GTAATCAGGAGGCTTGGAAG+CGG | - | chr8.2:67628386-67628405 | MS.gene019657:intron | 50.0% | |
| GTGGAGGGCTTACAGTAATC+AGG | - | chr8.2:67628372-67628391 | MS.gene019657:intron | 50.0% | |
| GTGGCTGGAGAGAAGGTTAA+GGG | - | chr8.2:67627800-67627819 | MS.gene019657:CDS | 50.0% | |
| GTTGGGGAAGAATGTGGCTT+AGG | - | chr8.2:67627614-67627633 | MS.gene019657:CDS | 50.0% | |
| TAATCAGGAGGCTTGGAAGC+GGG | - | chr8.2:67628387-67628406 | MS.gene019657:intron | 50.0% | |
| TAGGCGAAGGAGATTTGGAC+GGG | - | chr8.2:67629747-67629766 | MS.gene019657:CDS | 50.0% | |
| TCCTATAGGAAGGGGAAGAC+AGG | - | chr8.2:67629979-67629998 | MS.gene019657:CDS | 50.0% | |
| TCCTGTCTTCCCCTTCCTAT+AGG | + | chr8.2:67629983-67630002 | None:intergenic | 50.0% | |
| TGCCTGAAAAGCCAAAGTGG+AGG | - | chr8.2:67628356-67628375 | MS.gene019657:intron | 50.0% | |
| TGTGCTAGGCGAAGGAGATT+TGG | - | chr8.2:67629742-67629761 | MS.gene019657:CDS | 50.0% | |
| TTTCACAGCACGACGACTTG+TGG | + | chr8.2:67629774-67629793 | None:intergenic | 50.0% | |
| ! | AGTGGTTTGGGACCCAAGTA+TGG | - | chr8.2:67629915-67629934 | MS.gene019657:CDS | 50.0% |
| ! | ATCAAGCTGAAGTGCCAGAG+TGG | - | chr8.2:67629864-67629883 | MS.gene019657:CDS | 50.0% |
| ! | CTGAGTGAGGGTAATGGTGA+TGG | - | chr8.2:67628058-67628077 | MS.gene019657:CDS | 50.0% |
| ! | GGTGAGTTGTGGGATTTGGT+TGG | - | chr8.2:67627596-67627615 | MS.gene019657:CDS | 50.0% |
| ! | GTGGATTTGTCTGGTGGTGA+TGG | - | chr8.2:67628229-67628248 | MS.gene019657:CDS | 50.0% |
| !! | GCGTCTGATTTGGTGAAGAG+CGG | - | chr8.2:67628139-67628158 | MS.gene019657:CDS | 50.0% |
| !! | GTTCCGGTAGTGGATTTGTC+TGG | - | chr8.2:67628220-67628239 | MS.gene019657:CDS | 50.0% |
| !! | TGGAGTTGATGGTGCTAACG+AGG | - | chr8.2:67627925-67627944 | MS.gene019657:CDS | 50.0% |
| !! | TTGTCTGGTGGTGATGGAAG+TGG | - | chr8.2:67628235-67628254 | MS.gene019657:CDS | 50.0% |
| AGCTAAGCTGGAGTTAGGCG+TGG | - | chr8.2:67630072-67630091 | MS.gene019657:CDS | 55.0% | |
| AGTTGTTGTCGGGTCAGGGT+GGG | - | chr8.2:67627771-67627790 | MS.gene019657:CDS | 55.0% | |
| CACGGTGGGAATGTGGTAAC+TGG | - | chr8.2:67627887-67627906 | MS.gene019657:CDS | 55.0% | |
| GAATGTGGTGGCTGGAGAGA+AGG | - | chr8.2:67627793-67627812 | MS.gene019657:CDS | 55.0% | |
| GCTGGAGAGAAGGTTAAGGG+TGG | - | chr8.2:67627803-67627822 | MS.gene019657:CDS | 55.0% | |
| GGTGGCTGGAGAGAAGGTTA+AGG | - | chr8.2:67627799-67627818 | MS.gene019657:CDS | 55.0% | |
| TGGGACCCAAGTATGGCCAT+TGG | - | chr8.2:67629922-67629941 | MS.gene019657:CDS | 55.0% | |
| TTGGTGAAGAGCGGTGAGTC+TGG | - | chr8.2:67628148-67628167 | MS.gene019657:CDS | 55.0% | |
| ! | TGGAGCTGATGGTGCTAACG+AGG | - | chr8.2:67627823-67627842 | MS.gene019657:CDS | 55.0% |
| !! | CCGGTAGTGGATTTGTCTGG+TGG | - | chr8.2:67628223-67628242 | MS.gene019657:CDS | 55.0% |
| !! | CGTTGGTTCGACGCTGAAAC+TGG | - | chr8.2:67627643-67627662 | MS.gene019657:CDS | 55.0% |
| !! | GCGGGTTCTGTTGTTTCGAG+AGG | - | chr8.2:67628405-67628424 | MS.gene019657:intron | 55.0% |
| !!! | GCCCTCCACTTTGGCTTTTC+AGG | + | chr8.2:67628361-67628380 | None:intergenic | 55.0% |
| GAGTTGTTGTCGGGTCAGGG+TGG | - | chr8.2:67627770-67627789 | MS.gene019657:CDS | 60.0% | |
| GGATTCGGAGCAGTCCACTC+TGG | + | chr8.2:67629881-67629900 | None:intergenic | 60.0% | |
| CAGGGTGGGAATGTGGTGGC+TGG | - | chr8.2:67627785-67627804 | MS.gene019657:CDS | 65.0% | |
| GGGTCAGGGTGGGAATGTGG+TGG | - | chr8.2:67627781-67627800 | MS.gene019657:CDS | 65.0% | |
| GTCGGGTCAGGGTGGGAATG+TGG | - | chr8.2:67627778-67627797 | MS.gene019657:CDS | 65.0% | |
| TCATGCGGCTGCGCAGTTCC+AGG | - | chr8.2:67630004-67630023 | MS.gene019657:CDS | 65.0% | |
| !! | CATCGGCTCGCATCTGCGTG+GGG | - | chr8.2:67629834-67629853 | MS.gene019657:CDS | 65.0% |
| !! | GCATCGGCTCGCATCTGCGT+GGG | - | chr8.2:67629833-67629852 | MS.gene019657:CDS | 65.0% |
| !! | GGCATCGGCTCGCATCTGCG+TGG | - | chr8.2:67629832-67629851 | MS.gene019657:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 67627512 | 67630399 | 67627512 | ID=MS.gene019657 |
| chr8.2 | mRNA | 67627512 | 67630399 | 67627512 | ID=MS.gene019657.t1;Parent=MS.gene019657 |
| chr8.2 | exon | 67629437 | 67630399 | 67629437 | ID=MS.gene019657.t1.exon1;Parent=MS.gene019657.t1 |
| chr8.2 | CDS | 67629437 | 67630399 | 67629437 | ID=cds.MS.gene019657.t1;Parent=MS.gene019657.t1 |
| chr8.2 | exon | 67627512 | 67628300 | 67627512 | ID=MS.gene019657.t1.exon2;Parent=MS.gene019657.t1 |
| chr8.2 | CDS | 67627512 | 67628300 | 67627512 | ID=cds.MS.gene019657.t1;Parent=MS.gene019657.t1 |
| Gene Sequence |
| Protein sequence |
