Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene01976.t1 | XP_003594371.1 | 93.4 | 331 | 21 | 1 | 1 | 331 | 1 | 330 | 1.30E-146 | 529.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene01976.t1 | Q9SJW0 | 60.0 | 310 | 91 | 9 | 31 | 331 | 1 | 286 | 1.1e-59 | 231.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene01976.t1 | G7ISP0 | 93.4 | 331 | 21 | 1 | 1 | 331 | 1 | 330 | 9.6e-147 | 529.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene01976.t1 | TF | GARP-G2-like |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene01976.t1 | MTR_2g027860 | 95.468 | 331 | 14 | 1 | 1 | 331 | 1 | 330 | 0.0 | 623 |
MS.gene01976.t1 | MTR_7g088070 | 73.050 | 141 | 37 | 1 | 49 | 188 | 50 | 190 | 9.19e-69 | 216 |
MS.gene01976.t1 | MTR_7g088070 | 72.857 | 140 | 35 | 1 | 49 | 188 | 50 | 186 | 5.11e-68 | 214 |
MS.gene01976.t1 | MTR_7g098250 | 56.180 | 178 | 60 | 5 | 33 | 202 | 252 | 419 | 6.85e-53 | 181 |
MS.gene01976.t1 | MTR_1g053835 | 48.087 | 183 | 77 | 3 | 35 | 217 | 244 | 408 | 2.22e-51 | 176 |
MS.gene01976.t1 | MTR_1g080330 | 53.571 | 168 | 68 | 3 | 33 | 197 | 156 | 316 | 2.68e-48 | 167 |
MS.gene01976.t1 | MTR_7g093030 | 51.351 | 148 | 69 | 2 | 46 | 193 | 209 | 353 | 1.84e-47 | 164 |
MS.gene01976.t1 | MTR_7g115530 | 52.941 | 153 | 70 | 1 | 48 | 200 | 217 | 367 | 4.76e-47 | 164 |
MS.gene01976.t1 | MTR_5g027440 | 50.323 | 155 | 65 | 2 | 49 | 193 | 25 | 177 | 1.41e-44 | 154 |
MS.gene01976.t1 | MTR_6g444980 | 57.746 | 142 | 52 | 3 | 49 | 185 | 35 | 173 | 1.13e-43 | 154 |
MS.gene01976.t1 | MTR_4g081710 | 48.193 | 166 | 62 | 4 | 47 | 195 | 15 | 173 | 3.07e-43 | 152 |
MS.gene01976.t1 | MTR_6g444980 | 58.779 | 131 | 47 | 2 | 49 | 175 | 35 | 162 | 5.57e-42 | 149 |
MS.gene01976.t1 | MTR_5g041350 | 43.407 | 182 | 90 | 4 | 47 | 217 | 13 | 192 | 2.73e-41 | 147 |
MS.gene01976.t1 | MTR_2g086450 | 49.682 | 157 | 61 | 3 | 47 | 185 | 43 | 199 | 1.19e-40 | 146 |
MS.gene01976.t1 | MTR_6g032990 | 48.701 | 154 | 63 | 2 | 47 | 185 | 40 | 192 | 1.48e-40 | 146 |
MS.gene01976.t1 | MTR_7g068600 | 52.672 | 131 | 57 | 3 | 49 | 176 | 13 | 141 | 4.93e-40 | 141 |
MS.gene01976.t1 | MTR_1g080330 | 58.140 | 129 | 49 | 2 | 33 | 158 | 156 | 282 | 6.81e-39 | 139 |
MS.gene01976.t1 | MTR_7g115530 | 59.459 | 111 | 43 | 1 | 48 | 158 | 217 | 325 | 8.80e-37 | 135 |
MS.gene01976.t1 | MTR_2g027800 | 44.231 | 156 | 67 | 3 | 47 | 189 | 37 | 185 | 1.80e-34 | 128 |
MS.gene01976.t1 | MTR_2g027800 | 45.890 | 146 | 65 | 3 | 47 | 189 | 37 | 171 | 2.02e-34 | 128 |
MS.gene01976.t1 | MTR_1g090670 | 44.966 | 149 | 69 | 3 | 49 | 189 | 44 | 187 | 5.48e-33 | 124 |
MS.gene01976.t1 | MTR_1g053800 | 46.043 | 139 | 66 | 2 | 49 | 184 | 177 | 309 | 1.10e-30 | 118 |
MS.gene01976.t1 | MTR_7g115530 | 62.857 | 70 | 26 | 0 | 48 | 117 | 217 | 286 | 2.61e-24 | 100 |
MS.gene01976.t1 | MTR_7g093030 | 56.579 | 76 | 30 | 2 | 46 | 121 | 209 | 281 | 9.15e-24 | 99.4 |
MS.gene01976.t1 | MTR_7g115530 | 69.355 | 62 | 19 | 0 | 48 | 109 | 217 | 278 | 2.29e-23 | 99.4 |
MS.gene01976.t1 | MTR_1g053830 | 45.783 | 83 | 45 | 0 | 35 | 117 | 4 | 86 | 8.80e-23 | 91.3 |
MS.gene01976.t1 | MTR_7g093010 | 37.222 | 180 | 94 | 5 | 13 | 180 | 171 | 343 | 8.46e-22 | 95.1 |
MS.gene01976.t1 | MTR_7g115530 | 71.698 | 53 | 15 | 0 | 48 | 100 | 217 | 269 | 1.61e-19 | 87.0 |
MS.gene01976.t1 | MTR_7g115530 | 71.154 | 52 | 15 | 0 | 48 | 99 | 217 | 268 | 1.11e-18 | 85.1 |
MS.gene01976.t1 | MTR_2g023580 | 69.091 | 55 | 17 | 0 | 51 | 105 | 57 | 111 | 7.39e-17 | 79.0 |
MS.gene01976.t1 | MTR_7g069660 | 61.404 | 57 | 22 | 0 | 51 | 107 | 73 | 129 | 1.92e-16 | 79.3 |
MS.gene01976.t1 | MTR_6g071625 | 60.000 | 65 | 24 | 1 | 51 | 113 | 204 | 268 | 3.56e-16 | 79.0 |
MS.gene01976.t1 | MTR_8g066310 | 46.535 | 101 | 44 | 3 | 51 | 151 | 175 | 265 | 4.57e-16 | 78.6 |
MS.gene01976.t1 | MTR_3g450310 | 48.718 | 78 | 24 | 1 | 51 | 112 | 21 | 98 | 1.18e-15 | 75.1 |
MS.gene01976.t1 | MTR_1g093080 | 56.061 | 66 | 29 | 0 | 49 | 114 | 211 | 276 | 2.02e-15 | 76.6 |
MS.gene01976.t1 | MTR_5g029470 | 63.636 | 55 | 20 | 0 | 51 | 105 | 221 | 275 | 3.21e-15 | 76.3 |
MS.gene01976.t1 | MTR_8g086410 | 63.636 | 55 | 20 | 0 | 51 | 105 | 113 | 167 | 3.51e-15 | 76.3 |
MS.gene01976.t1 | MTR_8g086410 | 63.636 | 55 | 20 | 0 | 51 | 105 | 111 | 165 | 3.65e-15 | 76.3 |
MS.gene01976.t1 | MTR_0223s0040 | 53.425 | 73 | 33 | 1 | 51 | 123 | 20 | 91 | 3.99e-15 | 74.7 |
MS.gene01976.t1 | MTR_3g064840 | 63.636 | 55 | 20 | 0 | 51 | 105 | 276 | 330 | 4.13e-15 | 76.3 |
MS.gene01976.t1 | MTR_2g016220 | 65.455 | 55 | 19 | 0 | 51 | 105 | 91 | 145 | 4.51e-15 | 75.9 |
MS.gene01976.t1 | MTR_2g016220 | 65.455 | 55 | 19 | 0 | 51 | 105 | 91 | 145 | 5.27e-15 | 75.5 |
MS.gene01976.t1 | MTR_2g084230 | 65.455 | 55 | 19 | 0 | 51 | 105 | 99 | 153 | 5.79e-15 | 75.5 |
MS.gene01976.t1 | MTR_2g084230 | 65.455 | 55 | 19 | 0 | 51 | 105 | 99 | 153 | 6.73e-15 | 74.7 |
MS.gene01976.t1 | MTR_1g021520 | 61.818 | 55 | 21 | 0 | 51 | 105 | 128 | 182 | 8.60e-15 | 73.9 |
MS.gene01976.t1 | MTR_1g112370 | 65.385 | 52 | 18 | 0 | 51 | 102 | 24 | 75 | 8.98e-15 | 74.3 |
MS.gene01976.t1 | MTR_5g017980 | 55.714 | 70 | 30 | 1 | 49 | 117 | 193 | 262 | 3.55e-14 | 72.8 |
MS.gene01976.t1 | MTR_1g090670 | 37.607 | 117 | 60 | 3 | 81 | 189 | 1 | 112 | 3.63e-14 | 71.2 |
MS.gene01976.t1 | MTR_8g086410 | 61.538 | 52 | 20 | 0 | 51 | 102 | 113 | 164 | 1.19e-13 | 71.6 |
MS.gene01976.t1 | MTR_2g016220 | 67.347 | 49 | 16 | 0 | 51 | 99 | 91 | 139 | 2.00e-13 | 70.9 |
MS.gene01976.t1 | MTR_5g017980 | 55.714 | 70 | 29 | 2 | 49 | 117 | 192 | 260 | 5.19e-13 | 69.3 |
MS.gene01976.t1 | MTR_5g017980 | 55.714 | 70 | 29 | 2 | 49 | 117 | 193 | 261 | 5.48e-13 | 68.9 |
MS.gene01976.t1 | MTR_5g054300 | 58.182 | 55 | 23 | 0 | 49 | 103 | 198 | 252 | 7.00e-13 | 68.9 |
MS.gene01976.t1 | MTR_4g113140 | 48.718 | 78 | 39 | 1 | 39 | 115 | 224 | 301 | 8.53e-13 | 69.3 |
MS.gene01976.t1 | MTR_4g086835 | 60.000 | 55 | 22 | 0 | 49 | 103 | 274 | 328 | 1.58e-12 | 68.2 |
MS.gene01976.t1 | MTR_4g021790 | 56.364 | 55 | 23 | 1 | 49 | 103 | 168 | 221 | 2.76e-12 | 66.6 |
MS.gene01976.t1 | MTR_4g121020 | 60.000 | 55 | 21 | 1 | 49 | 103 | 215 | 268 | 4.04e-12 | 67.4 |
MS.gene01976.t1 | MTR_4g121020 | 60.000 | 55 | 21 | 1 | 49 | 103 | 215 | 268 | 4.08e-12 | 67.4 |
MS.gene01976.t1 | MTR_4g121020 | 60.000 | 55 | 21 | 1 | 49 | 103 | 111 | 164 | 4.23e-12 | 67.4 |
MS.gene01976.t1 | MTR_5g041350 | 42.169 | 83 | 45 | 2 | 136 | 217 | 1 | 81 | 4.43e-12 | 65.5 |
MS.gene01976.t1 | MTR_5g041350 | 40.698 | 86 | 48 | 2 | 133 | 217 | 20 | 103 | 5.32e-12 | 65.5 |
MS.gene01976.t1 | MTR_1g093080 | 60.784 | 51 | 20 | 0 | 49 | 99 | 211 | 261 | 5.71e-12 | 65.9 |
MS.gene01976.t1 | MTR_4g064730 | 48.611 | 72 | 35 | 2 | 49 | 119 | 131 | 201 | 9.84e-12 | 65.5 |
MS.gene01976.t1 | MTR_4g131600 | 53.333 | 60 | 26 | 2 | 49 | 107 | 201 | 259 | 1.06e-11 | 66.2 |
MS.gene01976.t1 | MTR_2g090675 | 50.820 | 61 | 29 | 1 | 42 | 102 | 154 | 213 | 1.08e-11 | 65.9 |
MS.gene01976.t1 | MTR_5g014040 | 43.038 | 79 | 44 | 1 | 27 | 105 | 289 | 366 | 1.52e-11 | 65.5 |
MS.gene01976.t1 | MTR_4g086835 | 60.000 | 55 | 21 | 1 | 49 | 103 | 274 | 327 | 1.57e-11 | 65.1 |
MS.gene01976.t1 | MTR_7g089010 | 58.182 | 55 | 22 | 1 | 49 | 103 | 91 | 144 | 1.68e-11 | 64.3 |
MS.gene01976.t1 | MTR_4g021760 | 35.570 | 149 | 72 | 6 | 49 | 192 | 169 | 298 | 1.82e-11 | 64.3 |
MS.gene01976.t1 | MTR_4g021855 | 50.794 | 63 | 30 | 1 | 41 | 103 | 160 | 221 | 2.68e-11 | 63.9 |
MS.gene01976.t1 | MTR_2g450070 | 54.545 | 55 | 24 | 1 | 49 | 103 | 213 | 266 | 2.86e-11 | 64.7 |
MS.gene01976.t1 | MTR_2g450070 | 54.545 | 55 | 24 | 1 | 49 | 103 | 213 | 266 | 2.95e-11 | 64.7 |
MS.gene01976.t1 | MTR_4g078810 | 53.704 | 54 | 24 | 1 | 49 | 102 | 158 | 210 | 5.82e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene01976.t1 | AT2G01060 | 66.555 | 299 | 69 | 10 | 43 | 331 | 9 | 286 | 6.32e-119 | 344 |
MS.gene01976.t1 | AT2G01060 | 62.403 | 258 | 66 | 10 | 84 | 331 | 1 | 237 | 2.21e-88 | 265 |
MS.gene01976.t1 | AT5G29000 | 57.692 | 156 | 63 | 2 | 29 | 183 | 170 | 323 | 1.13e-51 | 175 |
MS.gene01976.t1 | AT5G29000 | 57.692 | 156 | 63 | 2 | 29 | 183 | 170 | 323 | 1.13e-51 | 175 |
MS.gene01976.t1 | AT5G29000 | 57.692 | 156 | 63 | 2 | 29 | 183 | 213 | 366 | 2.39e-51 | 175 |
MS.gene01976.t1 | AT4G28610 | 52.432 | 185 | 80 | 4 | 41 | 225 | 217 | 393 | 2.03e-50 | 173 |
MS.gene01976.t1 | AT3G04450 | 50.847 | 177 | 78 | 3 | 30 | 199 | 181 | 355 | 4.85e-50 | 172 |
MS.gene01976.t1 | AT3G04450 | 50.847 | 177 | 78 | 3 | 30 | 199 | 181 | 355 | 4.85e-50 | 172 |
MS.gene01976.t1 | AT5G06800 | 57.534 | 146 | 57 | 3 | 37 | 182 | 182 | 322 | 5.09e-50 | 171 |
MS.gene01976.t1 | AT3G04450 | 50.847 | 177 | 78 | 3 | 30 | 199 | 221 | 395 | 8.41e-50 | 172 |
MS.gene01976.t1 | AT3G13040 | 50.265 | 189 | 86 | 4 | 44 | 227 | 236 | 421 | 1.64e-49 | 171 |
MS.gene01976.t1 | AT3G13040 | 50.265 | 189 | 86 | 4 | 44 | 227 | 236 | 421 | 1.64e-49 | 171 |
MS.gene01976.t1 | AT3G13040 | 50.265 | 189 | 86 | 4 | 44 | 227 | 236 | 421 | 1.64e-49 | 171 |
MS.gene01976.t1 | AT4G13640 | 59.574 | 141 | 47 | 2 | 49 | 179 | 37 | 177 | 1.67e-49 | 167 |
MS.gene01976.t1 | AT3G24120 | 58.156 | 141 | 49 | 2 | 49 | 179 | 41 | 181 | 5.90e-49 | 166 |
MS.gene01976.t1 | AT5G06800 | 55.705 | 149 | 60 | 3 | 37 | 182 | 182 | 327 | 6.18e-49 | 168 |
MS.gene01976.t1 | AT1G79430 | 61.268 | 142 | 47 | 3 | 49 | 185 | 34 | 172 | 2.12e-48 | 166 |
MS.gene01976.t1 | AT4G13640 | 58.333 | 144 | 47 | 3 | 49 | 179 | 37 | 180 | 2.21e-47 | 162 |
MS.gene01976.t1 | AT3G24120 | 56.944 | 144 | 49 | 3 | 49 | 179 | 41 | 184 | 9.14e-47 | 160 |
MS.gene01976.t1 | AT1G69580 | 45.026 | 191 | 86 | 4 | 47 | 220 | 32 | 220 | 3.17e-43 | 152 |
MS.gene01976.t1 | AT1G69580 | 44.560 | 193 | 83 | 5 | 47 | 220 | 32 | 219 | 3.95e-43 | 152 |
MS.gene01976.t1 | AT3G04030 | 48.333 | 180 | 72 | 4 | 23 | 185 | 19 | 194 | 7.57e-43 | 152 |
MS.gene01976.t1 | AT2G20400 | 58.333 | 132 | 54 | 1 | 49 | 180 | 231 | 361 | 2.00e-42 | 151 |
MS.gene01976.t1 | AT2G20400 | 59.091 | 132 | 52 | 1 | 49 | 180 | 231 | 360 | 3.16e-42 | 151 |
MS.gene01976.t1 | AT5G18240 | 51.316 | 152 | 61 | 1 | 47 | 185 | 43 | 194 | 3.49e-42 | 151 |
MS.gene01976.t1 | AT5G18240 | 51.316 | 152 | 61 | 1 | 47 | 185 | 43 | 194 | 3.49e-42 | 151 |
MS.gene01976.t1 | AT3G04030 | 47.778 | 180 | 72 | 5 | 23 | 185 | 19 | 193 | 3.32e-40 | 145 |
MS.gene01976.t1 | AT5G18240 | 50.000 | 152 | 61 | 2 | 47 | 185 | 43 | 192 | 6.74e-39 | 142 |
MS.gene01976.t1 | AT5G45580 | 45.223 | 157 | 56 | 3 | 49 | 182 | 7 | 156 | 4.48e-37 | 134 |
MS.gene01976.t1 | AT3G04030 | 45.556 | 180 | 71 | 5 | 23 | 185 | 19 | 188 | 5.54e-37 | 137 |
MS.gene01976.t1 | AT5G45580 | 45.223 | 157 | 56 | 3 | 49 | 182 | 23 | 172 | 6.69e-37 | 134 |
MS.gene01976.t1 | AT5G18240 | 48.026 | 152 | 60 | 2 | 47 | 185 | 43 | 188 | 2.92e-36 | 135 |
MS.gene01976.t1 | AT5G18240 | 48.026 | 152 | 60 | 2 | 47 | 185 | 43 | 188 | 2.92e-36 | 135 |
MS.gene01976.t1 | AT3G12730 | 47.826 | 138 | 64 | 4 | 49 | 179 | 23 | 159 | 2.47e-35 | 129 |
MS.gene01976.t1 | AT1G79430 | 54.545 | 110 | 42 | 3 | 81 | 185 | 1 | 107 | 5.51e-27 | 108 |
MS.gene01976.t1 | AT5G29000 | 60.674 | 89 | 33 | 1 | 29 | 117 | 213 | 299 | 2.37e-25 | 103 |
MS.gene01976.t1 | AT3G04450 | 64.286 | 70 | 25 | 0 | 44 | 113 | 233 | 302 | 2.93e-25 | 103 |
MS.gene01976.t1 | AT3G04030 | 49.153 | 118 | 47 | 2 | 81 | 185 | 1 | 118 | 1.20e-24 | 102 |
MS.gene01976.t1 | AT5G06800 | 60.563 | 71 | 26 | 1 | 45 | 115 | 188 | 256 | 5.88e-24 | 99.8 |
MS.gene01976.t1 | AT3G04030 | 44.915 | 118 | 46 | 3 | 81 | 185 | 1 | 112 | 4.49e-19 | 86.7 |
MS.gene01976.t1 | AT5G18240 | 43.220 | 118 | 48 | 2 | 81 | 185 | 1 | 112 | 4.81e-19 | 86.7 |
MS.gene01976.t1 | AT2G06020 | 59.649 | 57 | 23 | 0 | 49 | 105 | 86 | 142 | 7.53e-18 | 82.8 |
MS.gene01976.t1 | AT2G42660 | 65.517 | 58 | 20 | 0 | 51 | 108 | 52 | 109 | 2.61e-17 | 80.5 |
MS.gene01976.t1 | AT2G40260 | 57.333 | 75 | 20 | 1 | 51 | 125 | 84 | 146 | 2.94e-17 | 82.4 |
MS.gene01976.t1 | AT4G04605 | 69.231 | 52 | 16 | 0 | 51 | 102 | 16 | 67 | 4.69e-17 | 79.3 |
MS.gene01976.t1 | AT1G32240 | 43.396 | 106 | 51 | 2 | 51 | 156 | 215 | 311 | 2.00e-16 | 79.7 |
MS.gene01976.t1 | AT1G32240 | 43.396 | 106 | 51 | 2 | 51 | 156 | 215 | 311 | 2.21e-16 | 79.7 |
MS.gene01976.t1 | AT5G42630 | 57.576 | 66 | 28 | 0 | 51 | 116 | 107 | 172 | 4.64e-16 | 76.6 |
MS.gene01976.t1 | AT5G42630 | 57.576 | 66 | 28 | 0 | 51 | 116 | 107 | 172 | 6.42e-16 | 77.0 |
MS.gene01976.t1 | AT3G12730 | 39.623 | 106 | 56 | 4 | 81 | 179 | 1 | 105 | 1.22e-15 | 74.3 |
MS.gene01976.t1 | AT5G16560 | 60.000 | 65 | 24 | 1 | 51 | 113 | 221 | 285 | 1.63e-15 | 77.4 |
MS.gene01976.t1 | AT1G14600 | 69.231 | 52 | 16 | 0 | 51 | 102 | 25 | 76 | 2.04e-15 | 75.5 |
MS.gene01976.t1 | AT4G17695 | 63.636 | 55 | 20 | 0 | 51 | 105 | 166 | 220 | 3.30e-15 | 75.5 |
MS.gene01976.t1 | AT2G02060 | 69.231 | 52 | 16 | 0 | 51 | 102 | 31 | 82 | 3.34e-15 | 74.7 |
MS.gene01976.t1 | AT2G02060 | 69.231 | 52 | 16 | 0 | 51 | 102 | 31 | 82 | 3.34e-15 | 74.7 |
MS.gene01976.t1 | AT2G38300 | 63.636 | 55 | 20 | 0 | 51 | 105 | 56 | 110 | 3.41e-15 | 75.9 |
MS.gene01976.t1 | AT4G37180 | 60.000 | 55 | 22 | 0 | 49 | 103 | 210 | 264 | 3.31e-14 | 73.2 |
MS.gene01976.t1 | AT4G37180 | 60.000 | 55 | 22 | 0 | 49 | 103 | 217 | 271 | 3.93e-14 | 72.8 |
MS.gene01976.t1 | AT4G04580 | 54.545 | 55 | 25 | 0 | 51 | 105 | 16 | 70 | 1.35e-13 | 68.2 |
MS.gene01976.t1 | AT1G49560 | 54.545 | 66 | 30 | 0 | 49 | 114 | 192 | 257 | 1.52e-13 | 70.9 |
MS.gene01976.t1 | AT3G25790 | 58.182 | 55 | 23 | 0 | 54 | 108 | 201 | 255 | 3.06e-13 | 70.1 |
MS.gene01976.t1 | AT1G25550 | 55.385 | 65 | 29 | 0 | 44 | 108 | 204 | 268 | 6.28e-13 | 69.3 |
MS.gene01976.t1 | AT3G10760 | 48.101 | 79 | 40 | 1 | 25 | 103 | 81 | 158 | 6.60e-13 | 68.9 |
MS.gene01976.t1 | AT1G13300 | 55.000 | 60 | 27 | 0 | 49 | 108 | 181 | 240 | 1.46e-12 | 68.2 |
MS.gene01976.t1 | AT1G68670 | 48.052 | 77 | 40 | 0 | 42 | 118 | 208 | 284 | 2.38e-12 | 67.4 |
MS.gene01976.t1 | AT5G05090 | 58.182 | 55 | 22 | 1 | 49 | 103 | 81 | 134 | 4.12e-12 | 65.9 |
MS.gene01976.t1 | AT4G37180 | 55.172 | 58 | 26 | 0 | 49 | 106 | 210 | 267 | 5.55e-12 | 65.9 |
MS.gene01976.t1 | AT5G58080 | 52.174 | 69 | 28 | 3 | 49 | 117 | 194 | 257 | 6.22e-12 | 67.0 |
MS.gene01976.t1 | AT5G59570 | 58.491 | 53 | 21 | 1 | 51 | 103 | 143 | 194 | 9.49e-12 | 65.1 |
MS.gene01976.t1 | AT5G59570 | 58.491 | 53 | 21 | 1 | 51 | 103 | 143 | 194 | 9.49e-12 | 65.1 |
MS.gene01976.t1 | AT2G20570 | 51.471 | 68 | 31 | 2 | 35 | 102 | 140 | 205 | 1.07e-11 | 65.9 |
MS.gene01976.t1 | AT3G46640 | 56.364 | 55 | 23 | 1 | 49 | 103 | 144 | 197 | 1.12e-11 | 65.1 |
MS.gene01976.t1 | AT3G46640 | 56.364 | 55 | 23 | 1 | 49 | 103 | 144 | 197 | 1.12e-11 | 65.1 |
MS.gene01976.t1 | AT3G46640 | 58.491 | 53 | 21 | 1 | 51 | 103 | 146 | 197 | 1.21e-11 | 65.1 |
MS.gene01976.t1 | AT2G03500 | 53.226 | 62 | 29 | 0 | 47 | 108 | 231 | 292 | 1.45e-11 | 65.5 |
MS.gene01976.t1 | AT2G01760 | 45.333 | 75 | 38 | 2 | 49 | 123 | 135 | 206 | 1.59e-11 | 64.7 |
MS.gene01976.t1 | AT5G44190 | 46.154 | 65 | 34 | 1 | 38 | 102 | 136 | 199 | 2.22e-11 | 64.7 |
MS.gene01976.t1 | AT5G44190 | 46.154 | 65 | 34 | 1 | 38 | 102 | 136 | 199 | 2.57e-11 | 64.3 |
MS.gene01976.t1 | AT2G01760 | 45.333 | 75 | 38 | 2 | 49 | 123 | 200 | 271 | 2.88e-11 | 64.3 |
MS.gene01976.t1 | AT2G40970 | 56.364 | 55 | 23 | 1 | 49 | 103 | 105 | 158 | 3.99e-11 | 62.8 |
MS.gene01976.t1 | AT2G01760 | 45.333 | 75 | 38 | 2 | 49 | 123 | 228 | 299 | 4.22e-11 | 63.9 |
MS.gene01976.t1 | AT3G25790 | 58.696 | 46 | 19 | 0 | 54 | 99 | 201 | 246 | 9.88e-11 | 61.6 |
Find 86 sgRNAs with CRISPR-Local
Find 149 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTTCCTGATTCGAGTTTAAT+TGG | 0.223090 | 2.2:-59616087 | MS.gene01976:CDS |
CCATGTTAAGAGCCATTTGC+AGG | 0.349218 | 2.2:-59615646 | MS.gene01976:intron |
TACAAGAAGTGGTGAGGAAT+TGG | 0.349818 | 2.2:-59614166 | MS.gene01976:CDS |
TGCAGAGGCAGCTACAATTA+AGG | 0.357585 | 2.2:-59614641 | MS.gene01976:CDS |
CTTCCAATTAAACTCGAATC+AGG | 0.368180 | 2.2:+59616084 | None:intergenic |
CATAACTCTGAGGACACCTT+TGG | 0.375653 | 2.2:+59615692 | None:intergenic |
CAAAGGTGTCCTCAGAGTTA+TGG | 0.377183 | 2.2:-59615691 | MS.gene01976:CDS |
ATGTGCTGACCATGAACTAA+TGG | 0.385679 | 2.2:+59616057 | None:intergenic |
AAGACTGACAAGAAAGAAAC+GGG | 0.390608 | 2.2:-59615348 | MS.gene01976:CDS |
TGAGTTGAGATTAGAGTTGT+TGG | 0.390955 | 2.2:+59615984 | None:intergenic |
AAAGGTGTCCTCAGAGTTAT+GGG | 0.402741 | 2.2:-59615690 | MS.gene01976:CDS |
CTTTCAGATGCACCCGGCTC+TGG | 0.407460 | 2.2:-59614555 | MS.gene01976:CDS |
GAGCCGATGACACCAGATTC+TGG | 0.410432 | 2.2:-59614390 | MS.gene01976:CDS |
ACAATTAAGGATAGAAGCTC+AGG | 0.410929 | 2.2:-59614628 | MS.gene01976:CDS |
GGAAGCAATCCATTAGTTCA+TGG | 0.415844 | 2.2:-59616066 | MS.gene01976:CDS |
CTCGAATCAGGAACATTAGT+TGG | 0.419130 | 2.2:+59616096 | None:intergenic |
GATATGCTTTCCAATCTAGA+TGG | 0.424452 | 2.2:-59615324 | MS.gene01976:CDS |
GGAAAACAGCAGTTGGTTGC+TGG | 0.425608 | 2.2:+59614226 | None:intergenic |
CCAGATTCTGGTTGCCAAGT+TGG | 0.426902 | 2.2:-59614378 | MS.gene01976:CDS |
TCAGCTGAAAGACTCTTTGC+TGG | 0.432190 | 2.2:+59614432 | None:intergenic |
CCAACTTGGCAACCAGAATC+TGG | 0.436292 | 2.2:+59614378 | None:intergenic |
TTAGTTGATCTCTCGCCGTT+AGG | 0.441509 | 2.2:+59614339 | None:intergenic |
TCACGATGAACCATCTAGAT+TGG | 0.455940 | 2.2:+59615314 | None:intergenic |
TCTTATTGTCAAGCTCCTGT+TGG | 0.460268 | 2.2:+59614502 | None:intergenic |
GTTGATGCTGTGGCTCAACT+TGG | 0.466308 | 2.2:-59615919 | MS.gene01976:CDS |
AAGAAGGATCAAAGTGATCT+CGG | 0.468691 | 2.2:+59614199 | None:intergenic |
GAAGCGACTACATGAACAAT+TGG | 0.469698 | 2.2:-59614938 | MS.gene01976:CDS |
GGTGCTTCCACATCAGATAC+TGG | 0.470017 | 2.2:-59614268 | MS.gene01976:CDS |
ATAACTCTGAGGACACCTTT+GGG | 0.476739 | 2.2:+59615693 | None:intergenic |
TGAAGCTCTAAAGCTTCAAA+TGG | 0.481723 | 2.2:-59614968 | MS.gene01976:CDS |
CTTATTGTCAAGCTCCTGTT+GGG | 0.482216 | 2.2:+59614503 | None:intergenic |
CTTGTAGACATACTTAAAGA+AGG | 0.487037 | 2.2:+59614183 | None:intergenic |
TTAAGTATGTCTACAAGAAG+TGG | 0.491175 | 2.2:-59614177 | MS.gene01976:CDS |
GGTAGGAGCGCTATGGATCC+TGG | 0.493466 | 2.2:-59616027 | MS.gene01976:CDS |
CATGGTCAGCACATAGAGTC+TGG | 0.500025 | 2.2:-59616048 | MS.gene01976:CDS |
GAGTGCACATTACCTGCAAA+TGG | 0.500488 | 2.2:+59615634 | None:intergenic |
TCTAGGAGATATGTCCCAAC+AGG | 0.501996 | 2.2:-59614517 | MS.gene01976:CDS |
AAAGACTGACAAGAAAGAAA+CGG | 0.503951 | 2.2:-59615349 | MS.gene01976:CDS |
TCCTTAGGTGCCACACCCAA+AGG | 0.508503 | 2.2:-59615708 | MS.gene01976:intron |
GATGCTGTGGCTCAACTTGG+TGG | 0.512420 | 2.2:-59615916 | MS.gene01976:CDS |
GCTTGACAATAAGACTGAAC+CGG | 0.515420 | 2.2:-59614493 | MS.gene01976:CDS |
CTCAGAGTTATGGGTGTGCA+AGG | 0.516979 | 2.2:-59615681 | MS.gene01976:CDS |
TGGTGCTGATACACCAGAGC+CGG | 0.522258 | 2.2:+59614542 | None:intergenic |
GATCAAAGTGATCTCGGGTA+AGG | 0.525714 | 2.2:+59614205 | None:intergenic |
CCTGCAAATGGCTCTTAACA+TGG | 0.525821 | 2.2:+59615646 | None:intergenic |
GTACCATCGGATGAGCAGTC+AGG | 0.531157 | 2.2:+59615514 | None:intergenic |
ACTCAAAGCAACGTTTGCGT+TGG | 0.531602 | 2.2:-59615966 | MS.gene01976:CDS |
AGAAGGATCAAAGTGATCTC+GGG | 0.534435 | 2.2:+59614200 | None:intergenic |
AGCGCTATGGATCCTGGTAG+TGG | 0.534994 | 2.2:-59616021 | MS.gene01976:CDS |
GGTGTATCAGCACCAACTCT+AGG | 0.540010 | 2.2:-59614534 | MS.gene01976:CDS |
CGGGTAAGGAAAACAGCAGT+TGG | 0.546421 | 2.2:+59614219 | None:intergenic |
CAACCAGAATCTGGTGTCAT+CGG | 0.547984 | 2.2:+59614387 | None:intergenic |
TGTCAGCAGGAGAACCAACT+TGG | 0.549659 | 2.2:+59614364 | None:intergenic |
GGTGCTGATACACCAGAGCC+GGG | 0.552630 | 2.2:+59614543 | None:intergenic |
TCTGAGGACACCTTTGGGTG+TGG | 0.554653 | 2.2:+59615698 | None:intergenic |
AGAGTCTGGTAGGAGCGCTA+TGG | 0.562642 | 2.2:-59616034 | MS.gene01976:CDS |
AATTGGATAAGCTTGGTGGC+AGG | 0.568213 | 2.2:-59614149 | MS.gene01976:CDS |
AGACTGTTTCCTCCACTACC+AGG | 0.568775 | 2.2:+59616009 | None:intergenic |
GCAGTTGGTTGCTGGTATGA+TGG | 0.572224 | 2.2:+59614234 | None:intergenic |
TCGCCGTTAGGACTGTCAGC+AGG | 0.573885 | 2.2:+59614351 | None:intergenic |
AAGAGCAACAGCGACTCAGT+GGG | 0.575024 | 2.2:-59614581 | MS.gene01976:CDS |
AAGCAACGAGTAAGCATGGA+AGG | 0.576050 | 2.2:-59614315 | MS.gene01976:CDS |
TGGGACATATCTCCTAGAGT+TGG | 0.584995 | 2.2:+59614522 | None:intergenic |
GGTGAGGAATTGGATAAGCT+TGG | 0.592014 | 2.2:-59614156 | MS.gene01976:CDS |
TTACCTGACTGCTCATCCGA+TGG | 0.595863 | 2.2:-59615517 | MS.gene01976:intron |
GCGACTACATGAACAATTGG+AGG | 0.598747 | 2.2:-59614935 | MS.gene01976:intron |
TGAACGCTTTGTTGATGCTG+TGG | 0.601507 | 2.2:-59615929 | MS.gene01976:CDS |
AGCTCTAAAGCTTCAAATGG+AGG | 0.606557 | 2.2:-59614965 | MS.gene01976:CDS |
GGGGTTCTTTCAGATGCACC+CGG | 0.606585 | 2.2:-59614561 | MS.gene01976:CDS |
TCAATGTGAAACAGGTGCAG+AGG | 0.618063 | 2.2:-59614656 | MS.gene01976:intron |
TCTCCTGCTGACAGTCCTAA+CGG | 0.626527 | 2.2:-59614354 | MS.gene01976:CDS |
GTCAGCACATAGAGTCTGGT+AGG | 0.630464 | 2.2:-59616044 | MS.gene01976:CDS |
CTTGACTCCAGTATCTGATG+TGG | 0.632602 | 2.2:+59614261 | None:intergenic |
TATGTCTACAAGAAGTGGTG+AGG | 0.640839 | 2.2:-59614172 | MS.gene01976:CDS |
GAAGAGCAACAGCGACTCAG+TGG | 0.642615 | 2.2:-59614582 | MS.gene01976:CDS |
AATCTGGTGTCATCGGCTCG+TGG | 0.647766 | 2.2:+59614394 | None:intergenic |
GAGGAATTGGATAAGCTTGG+TGG | 0.651592 | 2.2:-59614153 | MS.gene01976:CDS |
CAATTAAGGATAGAAGCTCA+GGG | 0.654933 | 2.2:-59614627 | MS.gene01976:CDS |
GGGGAAAATACTCACGATCG+GGG | 0.658151 | 2.2:+59615893 | None:intergenic |
GCTATGGATCCTGGTAGTGG+AGG | 0.662575 | 2.2:-59616018 | MS.gene01976:CDS |
GACTGACAAGAAAGAAACGG+GGG | 0.678708 | 2.2:-59615346 | MS.gene01976:CDS |
CAACGAGTAAGCATGGAAGG+AGG | 0.680166 | 2.2:-59614312 | MS.gene01976:CDS |
AGTCTATTCGAATTCAGACA+TGG | 0.699773 | 2.2:-59614289 | MS.gene01976:CDS |
AGAGCAACAGCGACTCAGTG+GGG | 0.711050 | 2.2:-59614580 | MS.gene01976:CDS |
CTTGCACACCCATAACTCTG+AGG | 0.724184 | 2.2:+59615682 | None:intergenic |
AGACTGACAAGAAAGAAACG+GGG | 0.753105 | 2.2:-59615347 | MS.gene01976:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | CATTAAAAAAACAAGAATAA+TGG | + | chr2.2:59614658-59614677 | None:intergenic | 15.0% |
!!! | GATTTAAAAACTTTTAGATA+AGG | + | chr2.2:59614504-59614523 | None:intergenic | 15.0% |
!!! | TAAAAAGTTATGTTTCTTTT+AGG | - | chr2.2:59615116-59615135 | MS.gene01976:intron | 15.0% |
!! | AAAGTTATCAGCAAATTTAA+AGG | + | chr2.2:59614854-59614873 | None:intergenic | 20.0% |
!! | AAATCAGTAAGATCTAAATA+TGG | + | chr2.2:59614780-59614799 | None:intergenic | 20.0% |
!! | AGAATGCTTAATACTTTAAA+CGG | + | chr2.2:59614815-59614834 | None:intergenic | 20.0% |
!! | TATCATAATTATACAAGGAA+CGG | - | chr2.2:59614981-59615000 | MS.gene01976:CDS | 20.0% |
!!! | ACTTTTTAATTGTCTTATAG+AGG | - | chr2.2:59614869-59614888 | MS.gene01976:intron | 20.0% |
!!! | CTTTATTTTGAATCAAGTAA+AGG | - | chr2.2:59615507-59615526 | MS.gene01976:intron | 20.0% |
!!! | CTTTTTAATTGTCTTATAGA+GGG | - | chr2.2:59614870-59614889 | MS.gene01976:intron | 20.0% |
!!! | TTATTTTTTCAATGTGAAAC+AGG | - | chr2.2:59615581-59615600 | MS.gene01976:intron | 20.0% |
!!! | TTTTTAATTGTCTTATAGAG+GGG | - | chr2.2:59614871-59614890 | MS.gene01976:intron | 20.0% |
! | ATTTAAAGGAGAAAACAAAG+TGG | + | chr2.2:59614840-59614859 | None:intergenic | 25.0% |
! | ATTTCAGCTAACGAAAAAAT+GGG | + | chr2.2:59614375-59614394 | None:intergenic | 25.0% |
! | TAAATTCATCATCTAGCATT+AGG | + | chr2.2:59614466-59614485 | None:intergenic | 25.0% |
! | TGGGTTATCATAATTATACA+AGG | - | chr2.2:59614976-59614995 | MS.gene01976:CDS | 25.0% |
! | TTGGTTACATCATACATATT+TGG | - | chr2.2:59614408-59614427 | MS.gene01976:CDS | 25.0% |
!! | TCAGATATCAATACTTTTGT+TGG | - | chr2.2:59614432-59614451 | MS.gene01976:CDS | 25.0% |
!! | TTGTTTCGAAAAGTTTTTCA+TGG | - | chr2.2:59615202-59615221 | MS.gene01976:intron | 25.0% |
!!! | TATAGATTTTTTTCCACCAA+CGG | + | chr2.2:59615159-59615178 | None:intergenic | 25.0% |
AAAGACTGACAAGAAAGAAA+CGG | - | chr2.2:59614896-59614915 | MS.gene01976:intron | 30.0% | |
AAGGAATAATAGACAGAATG+AGG | - | chr2.2:59615526-59615545 | MS.gene01976:CDS | 30.0% | |
AATAATGTTACATGTCTGCA+GGG | - | chr2.2:59615241-59615260 | MS.gene01976:intron | 30.0% | |
AGGAATAATAGACAGAATGA+GGG | - | chr2.2:59615527-59615546 | MS.gene01976:CDS | 30.0% | |
ATGATAACCCAAAAGCAAAA+AGG | + | chr2.2:59614967-59614986 | None:intergenic | 30.0% | |
CATTTCAGCTAACGAAAAAA+TGG | + | chr2.2:59614376-59614395 | None:intergenic | 30.0% | |
CTAAATAGAACCATCTCATT+TGG | - | chr2.2:59615052-59615071 | MS.gene01976:intron | 30.0% | |
CTTGTAGACATACTTAAAGA+AGG | + | chr2.2:59616065-59616084 | None:intergenic | 30.0% | |
GTGAGATGAAATGATGATAT+TGG | - | chr2.2:59615423-59615442 | MS.gene01976:intron | 30.0% | |
TAATAATGTTACATGTCTGC+AGG | - | chr2.2:59615240-59615259 | MS.gene01976:intron | 30.0% | |
TGAAATGTAATGCGTAGAAT+TGG | - | chr2.2:59614389-59614408 | MS.gene01976:CDS | 30.0% | |
TGATAACCCAAAAGCAAAAA+GGG | + | chr2.2:59614966-59614985 | None:intergenic | 30.0% | |
TGCTAGATGATGAATTTATC+AGG | - | chr2.2:59614468-59614487 | MS.gene01976:CDS | 30.0% | |
TTAAGTATGTCTACAAGAAG+TGG | - | chr2.2:59616068-59616087 | MS.gene01976:CDS | 30.0% | |
TTTCAGCTAACGAAAAAATG+GGG | + | chr2.2:59614374-59614393 | None:intergenic | 30.0% | |
! | TCTATACTATCCTTTTCCTT+AGG | - | chr2.2:59614522-59614541 | MS.gene01976:CDS | 30.0% |
!! | ATAATGGATACCACATTAAG+AGG | + | chr2.2:59614642-59614661 | None:intergenic | 30.0% |
!!! | ATAGATTTTTTTCCACCAAC+GGG | + | chr2.2:59615158-59615177 | None:intergenic | 30.0% |
AAATCAGATTGACGTACCAT+CGG | + | chr2.2:59614747-59614766 | None:intergenic | 35.0% | |
AAGAAGGATCAAAGTGATCT+CGG | + | chr2.2:59616049-59616068 | None:intergenic | 35.0% | |
AAGACTGACAAGAAAGAAAC+GGG | - | chr2.2:59614897-59614916 | MS.gene01976:intron | 35.0% | |
AAGATCAGATCAGTTCAACA+AGG | + | chr2.2:59615343-59615362 | None:intergenic | 35.0% | |
ACAATTAAGGATAGAAGCTC+AGG | - | chr2.2:59615617-59615636 | MS.gene01976:intron | 35.0% | |
AGTCTATTCGAATTCAGACA+TGG | - | chr2.2:59615956-59615975 | MS.gene01976:CDS | 35.0% | |
ATAATGTTACATGTCTGCAG+GGG | - | chr2.2:59615242-59615261 | MS.gene01976:intron | 35.0% | |
CAATTAAGGATAGAAGCTCA+GGG | - | chr2.2:59615618-59615637 | MS.gene01976:intron | 35.0% | |
CTTCCAATTAAACTCGAATC+AGG | + | chr2.2:59614164-59614183 | None:intergenic | 35.0% | |
GATATGCTTTCCAATCTAGA+TGG | - | chr2.2:59614921-59614940 | MS.gene01976:intron | 35.0% | |
GGATGTAAAACCAAATGAGA+TGG | + | chr2.2:59615065-59615084 | None:intergenic | 35.0% | |
TAAAAAGCAACGAGTAAGCA+TGG | - | chr2.2:59615926-59615945 | MS.gene01976:CDS | 35.0% | |
! | ATAGCTTCCCTTTTTGCTTT+TGG | - | chr2.2:59614956-59614975 | MS.gene01976:CDS | 35.0% |
! | CAGGTAAGTATTTTGCTAGT+CGG | + | chr2.2:59614715-59614734 | None:intergenic | 35.0% |
! | GAGATGGTTCTATTTAGTTC+AGG | + | chr2.2:59615049-59615068 | None:intergenic | 35.0% |
! | GTTCCTGATTCGAGTTTAAT+TGG | - | chr2.2:59614158-59614177 | MS.gene01976:CDS | 35.0% |
! | TGAGTTGAGATTAGAGTTGT+TGG | + | chr2.2:59614264-59614283 | None:intergenic | 35.0% |
!! | TAGCTTCCCTTTTTGCTTTT+GGG | - | chr2.2:59614957-59614976 | MS.gene01976:CDS | 35.0% |
!! | TGAAGCTCTAAAGCTTCAAA+TGG | - | chr2.2:59615277-59615296 | MS.gene01976:intron | 35.0% |
!!! | TCTCATTTGGTTTTACATCC+TGG | - | chr2.2:59615065-59615084 | MS.gene01976:intron | 35.0% |
ACTAGTGCAAATTTGACTCC+AGG | + | chr2.2:59615086-59615105 | None:intergenic | 40.0% | |
AGAAGGATCAAAGTGATCTC+GGG | + | chr2.2:59616048-59616067 | None:intergenic | 40.0% | |
AGACTGACAAGAAAGAAACG+GGG | - | chr2.2:59614898-59614917 | MS.gene01976:intron | 40.0% | |
ATGGGGAAAATACTCACGAT+CGG | + | chr2.2:59614357-59614376 | None:intergenic | 40.0% | |
ATTCAATGCCTTAAACCCGT+TGG | - | chr2.2:59615140-59615159 | MS.gene01976:intron | 40.0% | |
CTCGAATCAGGAACATTAGT+TGG | + | chr2.2:59614152-59614171 | None:intergenic | 40.0% | |
CTTATTGTCAAGCTCCTGTT+GGG | + | chr2.2:59615745-59615764 | None:intergenic | 40.0% | |
GAAGCGACTACATGAACAAT+TGG | - | chr2.2:59615307-59615326 | MS.gene01976:intron | 40.0% | |
GCTTGACAATAAGACTGAAC+CGG | - | chr2.2:59615752-59615771 | MS.gene01976:intron | 40.0% | |
GGAAGCAATCCATTAGTTCA+TGG | - | chr2.2:59614179-59614198 | MS.gene01976:CDS | 40.0% | |
TAATGTTACATGTCTGCAGG+GGG | - | chr2.2:59615243-59615262 | MS.gene01976:intron | 40.0% | |
TACAAGAAGTGGTGAGGAAT+TGG | - | chr2.2:59616079-59616098 | MS.gene01976:CDS | 40.0% | |
TATGTCTACAAGAAGTGGTG+AGG | - | chr2.2:59616073-59616092 | MS.gene01976:CDS | 40.0% | |
TCACGATGAACCATCTAGAT+TGG | + | chr2.2:59614934-59614953 | None:intergenic | 40.0% | |
TCTTATTGTCAAGCTCCTGT+TGG | + | chr2.2:59615746-59615765 | None:intergenic | 40.0% | |
! | ATAACTCTGAGGACACCTTT+GGG | + | chr2.2:59614555-59614574 | None:intergenic | 40.0% |
! | ATGTGCTGACCATGAACTAA+TGG | + | chr2.2:59614191-59614210 | None:intergenic | 40.0% |
! | TGCTAGTCGGTATTTCTGTA+TGG | + | chr2.2:59614702-59614721 | None:intergenic | 40.0% |
!! | AAAGGTGTCCTCAGAGTTAT+GGG | - | chr2.2:59614555-59614574 | MS.gene01976:CDS | 40.0% |
!! | AGCTCTAAAGCTTCAAATGG+AGG | - | chr2.2:59615280-59615299 | MS.gene01976:intron | 40.0% |
!! | GCTCTTTAGCAGCTTTTTCT+GGG | + | chr2.2:59615788-59615807 | None:intergenic | 40.0% |
!! | TGCTCTTTAGCAGCTTTTTC+TGG | + | chr2.2:59615789-59615808 | None:intergenic | 40.0% |
!! | TTTTTCCACCAACGGGTTTA+AGG | + | chr2.2:59615151-59615170 | None:intergenic | 40.0% |
AAGCAACGAGTAAGCATGGA+AGG | - | chr2.2:59615930-59615949 | MS.gene01976:CDS | 45.0% | |
ACTCAAAGCAACGTTTGCGT+TGG | - | chr2.2:59614279-59614298 | MS.gene01976:CDS | 45.0% | |
CACTCTAGGTCCTCTTAATG+TGG | - | chr2.2:59614629-59614648 | MS.gene01976:CDS | 45.0% | |
CCATGTTAAGAGCCATTTGC+AGG | - | chr2.2:59614599-59614618 | MS.gene01976:CDS | 45.0% | |
CCTGCAAATGGCTCTTAACA+TGG | + | chr2.2:59614602-59614621 | None:intergenic | 45.0% | |
CTTGACTCCAGTATCTGATG+TGG | + | chr2.2:59615987-59616006 | None:intergenic | 45.0% | |
GACTGACAAGAAAGAAACGG+GGG | - | chr2.2:59614899-59614918 | MS.gene01976:intron | 45.0% | |
GAGGAATTGGATAAGCTTGG+TGG | - | chr2.2:59616092-59616111 | MS.gene01976:CDS | 45.0% | |
GAGTGCACATTACCTGCAAA+TGG | + | chr2.2:59614614-59614633 | None:intergenic | 45.0% | |
GATCAAAGTGATCTCGGGTA+AGG | + | chr2.2:59616043-59616062 | None:intergenic | 45.0% | |
GCGACTACATGAACAATTGG+AGG | - | chr2.2:59615310-59615329 | MS.gene01976:intron | 45.0% | |
GGTGAGGAATTGGATAAGCT+TGG | - | chr2.2:59616089-59616108 | MS.gene01976:CDS | 45.0% | |
TCAATGTGAAACAGGTGCAG+AGG | - | chr2.2:59615589-59615608 | MS.gene01976:intron | 45.0% | |
TCAGCTGAAAGACTCTTTGC+TGG | + | chr2.2:59615816-59615835 | None:intergenic | 45.0% | |
TCTAGGAGATATGTCCCAAC+AGG | - | chr2.2:59615728-59615747 | MS.gene01976:intron | 45.0% | |
TGCAGAGGCAGCTACAATTA+AGG | - | chr2.2:59615604-59615623 | MS.gene01976:intron | 45.0% | |
TGGGACATATCTCCTAGAGT+TGG | + | chr2.2:59615726-59615745 | None:intergenic | 45.0% | |
TGGGGAAAATACTCACGATC+GGG | + | chr2.2:59614356-59614375 | None:intergenic | 45.0% | |
TTAGTTGATCTCTCGCCGTT+AGG | + | chr2.2:59615909-59615928 | None:intergenic | 45.0% | |
TTGCAGGTAATGTGCACTCT+AGG | - | chr2.2:59614615-59614634 | MS.gene01976:CDS | 45.0% | |
! | AATTGGATAAGCTTGGTGGC+AGG | - | chr2.2:59616096-59616115 | MS.gene01976:CDS | 45.0% |
! | CATAACTCTGAGGACACCTT+TGG | + | chr2.2:59614556-59614575 | None:intergenic | 45.0% |
! | TGAACGCTTTGTTGATGCTG+TGG | - | chr2.2:59614316-59614335 | MS.gene01976:CDS | 45.0% |
!! | CAAAGGTGTCCTCAGAGTTA+TGG | - | chr2.2:59614554-59614573 | MS.gene01976:CDS | 45.0% |
!! | CAACCAGAATCTGGTGTCAT+CGG | + | chr2.2:59615861-59615880 | None:intergenic | 45.0% |
!! | TAGCAGCTTTTTCTGGGTCA+GGG | + | chr2.2:59615782-59615801 | None:intergenic | 45.0% |
!! | TTAGCAGCTTTTTCTGGGTC+AGG | + | chr2.2:59615783-59615802 | None:intergenic | 45.0% |
AAGAGCAACAGCGACTCAGT+GGG | - | chr2.2:59615664-59615683 | MS.gene01976:CDS | 50.0% | |
AGACTGTTTCCTCCACTACC+AGG | + | chr2.2:59614239-59614258 | None:intergenic | 50.0% | |
CAACGAGTAAGCATGGAAGG+AGG | - | chr2.2:59615933-59615952 | MS.gene01976:CDS | 50.0% | |
CAATGCCTTAAACCCGTTGG+TGG | - | chr2.2:59615143-59615162 | MS.gene01976:intron | 50.0% | |
CATGGTCAGCACATAGAGTC+TGG | - | chr2.2:59614197-59614216 | MS.gene01976:CDS | 50.0% | |
CCAACTTGGCAACCAGAATC+TGG | + | chr2.2:59615870-59615889 | None:intergenic | 50.0% | |
CGGGTAAGGAAAACAGCAGT+TGG | + | chr2.2:59616029-59616048 | None:intergenic | 50.0% | |
CTCAGAGTTATGGGTGTGCA+AGG | - | chr2.2:59614564-59614583 | MS.gene01976:CDS | 50.0% | |
CTTGCACACCCATAACTCTG+AGG | + | chr2.2:59614566-59614585 | None:intergenic | 50.0% | |
GCAGTTGGTTGCTGGTATGA+TGG | + | chr2.2:59616014-59616033 | None:intergenic | 50.0% | |
GGAAAACAGCAGTTGGTTGC+TGG | + | chr2.2:59616022-59616041 | None:intergenic | 50.0% | |
GGGGAAAATACTCACGATCG+GGG | + | chr2.2:59614355-59614374 | None:intergenic | 50.0% | |
GGTGCTTCCACATCAGATAC+TGG | - | chr2.2:59615977-59615996 | MS.gene01976:CDS | 50.0% | |
GGTGTATCAGCACCAACTCT+AGG | - | chr2.2:59615711-59615730 | MS.gene01976:intron | 50.0% | |
GTCAGCACATAGAGTCTGGT+AGG | - | chr2.2:59614201-59614220 | MS.gene01976:CDS | 50.0% | |
GTTGATGCTGTGGCTCAACT+TGG | - | chr2.2:59614326-59614345 | MS.gene01976:CDS | 50.0% | |
TCTCCTGCTGACAGTCCTAA+CGG | - | chr2.2:59615891-59615910 | MS.gene01976:intron | 50.0% | |
TGTCAGCAGGAGAACCAACT+TGG | + | chr2.2:59615884-59615903 | None:intergenic | 50.0% | |
TTACCTGACTGCTCATCCGA+TGG | - | chr2.2:59614728-59614747 | MS.gene01976:intron | 50.0% | |
! | CCAGATTCTGGTTGCCAAGT+TGG | - | chr2.2:59615867-59615886 | MS.gene01976:intron | 50.0% |
!! | AGCAGCTTTTTCTGGGTCAG+GGG | + | chr2.2:59615781-59615800 | None:intergenic | 50.0% |
ACCTTTGGGTGTGGCACCTA+AGG | + | chr2.2:59614541-59614560 | None:intergenic | 55.0% | |
AGAGCAACAGCGACTCAGTG+GGG | - | chr2.2:59615665-59615684 | MS.gene01976:CDS | 55.0% | |
AGCGCTATGGATCCTGGTAG+TGG | - | chr2.2:59614224-59614243 | MS.gene01976:CDS | 55.0% | |
GAAGAGCAACAGCGACTCAG+TGG | - | chr2.2:59615663-59615682 | MS.gene01976:CDS | 55.0% | |
GAGCCGATGACACCAGATTC+TGG | - | chr2.2:59615855-59615874 | MS.gene01976:intron | 55.0% | |
GATGCTGTGGCTCAACTTGG+TGG | - | chr2.2:59614329-59614348 | MS.gene01976:CDS | 55.0% | |
GGGGTTCTTTCAGATGCACC+CGG | - | chr2.2:59615684-59615703 | MS.gene01976:CDS | 55.0% | |
GGGTGTGGCACCTAAGGAAA+AGG | + | chr2.2:59614535-59614554 | None:intergenic | 55.0% | |
GTACCATCGGATGAGCAGTC+AGG | + | chr2.2:59614734-59614753 | None:intergenic | 55.0% | |
TCTGAGGACACCTTTGGGTG+TGG | + | chr2.2:59614550-59614569 | None:intergenic | 55.0% | |
! | TCCTTAGGTGCCACACCCAA+AGG | - | chr2.2:59614537-59614556 | MS.gene01976:CDS | 55.0% |
! | TTTTCTGGGTCAGGGGTTGC+CGG | + | chr2.2:59615774-59615793 | None:intergenic | 55.0% |
!! | AATCTGGTGTCATCGGCTCG+TGG | + | chr2.2:59615854-59615873 | None:intergenic | 55.0% |
!! | AGAGTCTGGTAGGAGCGCTA+TGG | - | chr2.2:59614211-59614230 | MS.gene01976:CDS | 55.0% |
!! | GCTATGGATCCTGGTAGTGG+AGG | - | chr2.2:59614227-59614246 | MS.gene01976:CDS | 55.0% |
!! | TGGTGCTGATACACCAGAGC+CGG | + | chr2.2:59615706-59615725 | None:intergenic | 55.0% |
CTTTCAGATGCACCCGGCTC+TGG | - | chr2.2:59615690-59615709 | MS.gene01976:CDS | 60.0% | |
TCGCCGTTAGGACTGTCAGC+AGG | + | chr2.2:59615897-59615916 | None:intergenic | 60.0% | |
!! | GGTAGGAGCGCTATGGATCC+TGG | - | chr2.2:59614218-59614237 | MS.gene01976:CDS | 60.0% |
!! | GGTGCTGATACACCAGAGCC+GGG | + | chr2.2:59615705-59615724 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 59614140 | 59616127 | 59614140 | ID=MS.gene01976 |
chr2.2 | mRNA | 59614140 | 59616127 | 59614140 | ID=MS.gene01976.t1;Parent=MS.gene01976 |
chr2.2 | exon | 59615908 | 59616127 | 59615908 | ID=MS.gene01976.t1.exon1;Parent=MS.gene01976.t1 |
chr2.2 | CDS | 59615908 | 59616127 | 59615908 | ID=cds.MS.gene01976.t1;Parent=MS.gene01976.t1 |
chr2.2 | exon | 59615647 | 59615723 | 59615647 | ID=MS.gene01976.t1.exon2;Parent=MS.gene01976.t1 |
chr2.2 | CDS | 59615647 | 59615723 | 59615647 | ID=cds.MS.gene01976.t1;Parent=MS.gene01976.t1 |
chr2.2 | exon | 59615518 | 59615560 | 59615518 | ID=MS.gene01976.t1.exon3;Parent=MS.gene01976.t1 |
chr2.2 | CDS | 59615518 | 59615560 | 59615518 | ID=cds.MS.gene01976.t1;Parent=MS.gene01976.t1 |
chr2.2 | exon | 59615318 | 59615378 | 59615318 | ID=MS.gene01976.t1.exon4;Parent=MS.gene01976.t1 |
chr2.2 | CDS | 59615318 | 59615378 | 59615318 | ID=cds.MS.gene01976.t1;Parent=MS.gene01976.t1 |
chr2.2 | exon | 59614936 | 59615005 | 59614936 | ID=MS.gene01976.t1.exon5;Parent=MS.gene01976.t1 |
chr2.2 | CDS | 59614936 | 59615005 | 59614936 | ID=cds.MS.gene01976.t1;Parent=MS.gene01976.t1 |
chr2.2 | exon | 59614140 | 59614664 | 59614140 | ID=MS.gene01976.t1.exon6;Parent=MS.gene01976.t1 |
chr2.2 | CDS | 59614140 | 59614664 | 59614140 | ID=cds.MS.gene01976.t1;Parent=MS.gene01976.t1 |
Gene Sequence |
Protein sequence |