AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene019788

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene019788.t1 MTR_6g035370 88.323 668 50 8 1 662 1 646 0.0 820
MS.gene019788.t1 MTR_1g098900 55.248 686 224 18 1 658 1 631 0.0 603
MS.gene019788.t1 MTR_1g098870 42.053 604 235 14 2 600 3 496 9.12e-125 381
MS.gene019788.t1 MTR_2g026725 31.597 288 145 7 281 568 115 350 1.44e-34 135
MS.gene019788.t1 MTR_2g026725 39.796 98 56 2 54 149 261 357 2.07e-16 82.0
MS.gene019788.t1 MTR_1g492790 53.600 125 53 2 54 173 113 237 1.55e-34 138
MS.gene019788.t1 MTR_1g492790 45.652 92 48 2 476 566 110 200 4.33e-19 91.3
MS.gene019788.t1 MTR_1g060990 64.583 96 31 2 46 140 124 217 6.51e-32 130
MS.gene019788.t1 MTR_1g060990 46.237 93 48 2 476 567 127 218 4.42e-19 91.3
MS.gene019788.t1 MTR_1g060990 35.338 133 80 2 225 357 244 370 1.30e-14 77.4
MS.gene019788.t1 MTR_7g114860 57.000 100 34 2 480 570 381 480 2.37e-28 119
MS.gene019788.t1 MTR_7g114860 41.837 98 47 2 55 142 381 478 8.27e-16 80.9
MS.gene019788.t1 MTR_1g081180 59.783 92 35 1 480 569 418 509 1.48e-26 114
MS.gene019788.t1 MTR_1g081180 39.785 93 53 2 53 142 416 508 5.99e-14 75.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene019788.t1 AT1G76880 57.407 324 92 8 43 359 49 333 1.61e-94 304
MS.gene019788.t1 AT1G76880 65.584 154 38 3 458 598 382 533 1.86e-60 213
MS.gene019788.t1 AT1G76880 46.739 92 48 1 50 140 403 494 3.67e-19 92.0
MS.gene019788.t1 AT1G76880 47.253 91 47 1 479 569 60 149 6.11e-19 91.7
MS.gene019788.t1 AT1G76890 49.062 320 130 7 52 357 38 338 4.51e-83 273
MS.gene019788.t1 AT1G76890 63.309 139 41 2 459 597 378 506 4.70e-49 181
MS.gene019788.t1 AT1G76890 44.565 92 50 1 52 142 394 485 1.80e-19 93.2
MS.gene019788.t1 AT1G76890 43.182 88 49 1 479 566 40 126 4.96e-17 85.5
MS.gene019788.t1 AT5G28300 36.789 299 139 9 281 569 300 558 2.58e-44 168
MS.gene019788.t1 AT5G28300 39.815 108 54 3 48 144 452 559 2.28e-15 80.1
MS.gene019788.t1 AT5G03680 34.202 307 142 7 55 356 119 370 6.55e-44 167
MS.gene019788.t1 AT5G03680 44.211 95 51 2 480 573 119 212 4.67e-19 91.7
MS.gene019788.t1 AT1G33240 59.649 114 35 1 54 167 61 163 3.57e-38 150
MS.gene019788.t1 AT1G33240 59.649 114 35 1 54 167 61 163 7.19e-38 150
MS.gene019788.t1 AT3G10000 57.143 105 43 2 38 140 71 175 1.75e-30 125
MS.gene019788.t1 AT3G10000 44.086 93 51 1 476 567 84 176 1.58e-20 95.9
MS.gene019788.t1 AT3G10000 53.846 104 38 2 38 140 71 165 1.08e-26 114
MS.gene019788.t1 AT3G10000 41.304 92 45 1 476 567 84 166 2.44e-17 85.9
MS.gene019788.t1 AT5G47660 51.685 89 41 1 480 568 303 389 8.11e-22 98.6
MS.gene019788.t1 AT5G47660 47.059 85 40 3 55 137 303 384 4.45e-14 75.1
MS.gene019788.t1 AT1G33240 38.655 119 71 2 55 171 396 514 3.21e-19 92.4
MS.gene019788.t1 AT1G33240 54.430 79 25 1 89 167 57 124 2.07e-18 89.7

Find 199 sgRNAs with CRISPR-Local

Find 242 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAAAGATGCAAGTGTTAA+AGG 0.186987 6.2:+26185456 MS.gene019788:CDS
AAGAAATCCGTTGAAATATT+AGG 0.189841 6.2:-26187013 None:intergenic
TTCAGGTTTGATGAAGAAAA+TGG 0.194543 6.2:+26187822 MS.gene019788:CDS
CCATTATGGGAGGAGATTTC+AGG 0.224552 6.2:+26187805 MS.gene019788:CDS
TTTACCACCTCTTCCTTCTT+TGG 0.238671 6.2:-26186636 None:intergenic
ATGGACCTAAAGGGCCATTA+TGG 0.251711 6.2:+26187791 MS.gene019788:CDS
TCGGTGTCGGTGTTGGTGTT+GGG 0.265380 6.2:-26187441 None:intergenic
GATATGAAGTACCAAGAAAA+TGG 0.297874 6.2:+26187772 MS.gene019788:CDS
GGACATGTCTTTGAATCTTC+TGG 0.297895 6.2:-26187934 None:intergenic
TCCTCCCATAATGGCCCTTT+AGG 0.309914 6.2:-26187796 None:intergenic
GTTGTTGTTGATGATGGTAT+TGG 0.315589 6.2:-26186923 None:intergenic
GGTGGTGGTGGATCAATTTC+AGG 0.335799 6.2:+26185306 MS.gene019788:CDS
GGAGTTGCACAAGAGGTTCT+TGG 0.339414 6.2:+26187171 MS.gene019788:CDS
GTCGGTGTCGGTGTTGGTGT+TGG 0.352301 6.2:-26187442 None:intergenic
TACTTTGGCTAATAGGAAAA+TGG 0.355696 6.2:+26186538 MS.gene019788:intron
GTCACATCCGCCCCGGCTGC+TGG 0.363646 6.2:-26188099 None:intergenic
GTTGAAGATAAGGTCTGATA+TGG 0.365393 6.2:+26185425 MS.gene019788:CDS
AGAAATCCGTTGAAATATTA+GGG 0.373358 6.2:-26187012 None:intergenic
AGAGGGTTATTAGTATTTGT+AGG 0.377717 6.2:-26186953 None:intergenic
TACTAAAGATGCTGCTGTTA+TGG 0.378392 6.2:+26187312 MS.gene019788:CDS
AAAGCAACTGTTTCTTGTCT+TGG 0.384139 6.2:-26185402 None:intergenic
TCAGGTTTGATGAAGAAAAT+GGG 0.384923 6.2:+26187823 MS.gene019788:CDS
AATAGGAAAATGGCAGATCT+TGG 0.385060 6.2:+26186548 MS.gene019788:intron
CAAGTGTTAAAGGTCCCTTA+TGG 0.386222 6.2:+26185466 MS.gene019788:CDS
ACTGGCAATGGTGCTGCTGC+TGG 0.390612 6.2:-26187466 None:intergenic
GCAATGGCCTCCACAACAAC+AGG 0.393419 6.2:+26188071 MS.gene019788:CDS
TGAAGAAAATGGGGTACAAT+AGG 0.394111 6.2:+26187833 MS.gene019788:CDS
ACAGCAGCAAGTGACGAATA+TGG 0.394354 6.2:+26187645 MS.gene019788:CDS
TGCAAAGGATTAATAGAGAA+AGG 0.396339 6.2:+26187257 MS.gene019788:CDS
CAAAGAGGTGCAAAGAGAAA+TGG 0.396790 6.2:+26187860 MS.gene019788:CDS
CCTGAAATCTCCTCCCATAA+TGG 0.399545 6.2:-26187805 None:intergenic
AACGATGATGGCACCGTTGA+TGG 0.403172 6.2:+26188035 MS.gene019788:CDS
GTCGGTGTTGGTGTTGGGGT+TGG 0.406448 6.2:-26187436 None:intergenic
AACAGGCGCCACCAGCAGCC+GGG 0.409599 6.2:+26188088 MS.gene019788:CDS
CAGTTGCTTTGTTGAAGATA+AGG 0.412788 6.2:+26185415 MS.gene019788:CDS
GACTCAACAGTGTTGGGAAC+AGG 0.413588 6.2:+26185243 MS.gene019788:CDS
CCTTGAAACTTCATCCCATA+AGG 0.419165 6.2:-26185481 None:intergenic
TGTGTTTGAGTTTGTGGTGG+TGG 0.420050 6.2:-26186746 None:intergenic
GGAACAGGAGGAGGCAGCTC+AGG 0.420665 6.2:+26185258 MS.gene019788:CDS
GAGGGTGTGGATAGAAGTTT+TGG 0.422223 6.2:+26185366 MS.gene019788:CDS
AAGTTCGTCTTCGACTTCTT+CGG 0.423944 6.2:+26187045 MS.gene019788:CDS
GGTGTTTGTGTTTGAGTTTG+TGG 0.424812 6.2:-26186752 None:intergenic
AGAAATGAAGCTGTTGTTGT+AGG 0.430108 6.2:-26186794 None:intergenic
GTAATAGTAATTTGAGGAAG+AGG 0.435660 6.2:-26186971 None:intergenic
TGTGTGTAAGACATTGGAAT+TGG 0.436193 6.2:-26186878 None:intergenic
ACCAACTTGATGCTCTATAC+AGG 0.438141 6.2:+26187965 MS.gene019788:CDS
AGGGGTGGGAATAGTACTAA+TGG 0.438142 6.2:-26186774 None:intergenic
TGGACCTAAAGGGCCATTAT+GGG 0.446325 6.2:+26187792 MS.gene019788:CDS
GGTGGTGGTGGTGTTATTGA+AGG 0.449272 6.2:-26186731 None:intergenic
GGTATTGCTGGTATTGGTAT+TGG 0.450653 6.2:-26187505 None:intergenic
ACGGTGTTGTTGTTCAATAC+AGG 0.451355 6.2:-26187376 None:intergenic
AAGTGTTAAAGGTCCCTTAT+GGG 0.453094 6.2:+26185467 MS.gene019788:CDS
GACGGAAGAGGAAGAGGAAA+TGG 0.453743 6.2:+26187101 MS.gene019788:CDS
CAACAGGCGCCACCAGCAGC+CGG 0.454870 6.2:+26188087 MS.gene019788:CDS
CGAATCGACGGAAGAGGAAG+AGG 0.460674 6.2:+26187095 MS.gene019788:CDS
GGTGTAGGTATTGCTGGTAT+TGG 0.461156 6.2:-26187511 None:intergenic
TTGAGGTGGCGGTGGTTTGT+TGG 0.463608 6.2:-26188247 None:intergenic
GAAATGAAGCTGTTGTTGTA+GGG 0.465028 6.2:-26186793 None:intergenic
AATGGTGCTGCTGCTGGTGT+CGG 0.467443 6.2:-26187460 None:intergenic
GCTGCTGCTGGTGTCGGTGT+CGG 0.467777 6.2:-26187454 None:intergenic
CCTTATGGGATGAAGTTTCA+AGG 0.471695 6.2:+26185481 MS.gene019788:CDS
GCATCAAGTTGGTGAAAGTA+AGG 0.472098 6.2:-26187955 None:intergenic
CTAGGGGACTCAACAGTGTT+GGG 0.473609 6.2:+26185237 MS.gene019788:CDS
TGTGGAGGCCATTGCTGCTC+CGG 0.474042 6.2:-26188063 None:intergenic
GGCAATGGTACTGCTGGTAC+TGG 0.477694 6.2:-26187484 None:intergenic
GTTTGAGTTTGTGGTGGTGG+TGG 0.478900 6.2:-26186743 None:intergenic
TGGAAGTAGTAGAAATGAAG+AGG 0.480126 6.2:+26185347 MS.gene019788:CDS
GCAAAGGATTAATAGAGAAA+GGG 0.481748 6.2:+26187258 MS.gene019788:CDS
TACCAAGAAAATGGACCTAA+AGG 0.481995 6.2:+26187781 MS.gene019788:CDS
GCTGGTGGCGCCTGTTGTTG+TGG 0.482373 6.2:-26188081 None:intergenic
TTTCTTTGAGAGACTAATGA+AGG 0.482390 6.2:+26187129 MS.gene019788:CDS
CTTGAAACTTCATCCCATAA+GGG 0.483873 6.2:-26185480 None:intergenic
TAGTAGAAATGAAGAGGGTG+TGG 0.484511 6.2:+26185353 MS.gene019788:CDS
AGCTGCTGCGTTGAGGCCTG+AGG 0.484683 6.2:+26188011 MS.gene019788:CDS
GAGGGTTATTAGTATTTGTA+GGG 0.485687 6.2:-26186952 None:intergenic
TGGTGGAAAATGTGTAGGGT+TGG 0.486037 6.2:-26186903 None:intergenic
CGGTGTCGGTGTTGGTGTTG+GGG 0.486815 6.2:-26187440 None:intergenic
GGAAACGACAACAATGGAAG+GGG 0.487557 6.2:+26187069 MS.gene019788:CDS
ATAGGAAAATGGCAGATCTT+GGG 0.492836 6.2:+26186549 MS.gene019788:intron
ACCAAGAAAATGGACCTAAA+GGG 0.493139 6.2:+26187782 MS.gene019788:CDS
ACATCAGCAGCAGCAACAAC+AGG 0.496241 6.2:+26187612 MS.gene019788:CDS
GCAGCAGCAACAACAGGTTC+AGG 0.497898 6.2:+26187618 MS.gene019788:CDS
GCTGGTGTCGGTGTCGGTGT+TGG 0.501369 6.2:-26187448 None:intergenic
GGCAGCTCAGGAGATGGAGC+AGG 0.501746 6.2:+26185270 MS.gene019788:CDS
GGGGATCGAATCGACGGAAG+AGG 0.501747 6.2:+26187089 MS.gene019788:CDS
GGAATTGGAAGTGTAGTTGA+TGG 0.503022 6.2:-26186863 None:intergenic
TGTTGCGGTGTAGGTATTGC+TGG 0.503047 6.2:-26187517 None:intergenic
GGCACCGTTGATGGTTCAGC+CGG 0.506059 6.2:+26188044 MS.gene019788:CDS
TGTTGCTGCTGCTGATGTTG+TGG 0.506243 6.2:-26187607 None:intergenic
GAAGGTGATTGATGCATTGA+AGG 0.506401 6.2:-26186713 None:intergenic
TTCATTCCCTAATATTTCAA+CGG 0.506565 6.2:+26187006 MS.gene019788:CDS
AAAGAGGTGCAAAGAGAAAT+GGG 0.507157 6.2:+26187861 MS.gene019788:CDS
GGCGCCACCAGCAGCCGGGG+CGG 0.514500 6.2:+26188092 MS.gene019788:CDS
GTTTGAACTTGTTGCGGTGT+AGG 0.516119 6.2:-26187526 None:intergenic
CACTCCTATGCAGCTATGCT+AGG 0.516756 6.2:+26185219 None:intergenic
AACAGCACCGGTCATTCCTC+AGG 0.519741 6.2:+26187573 MS.gene019788:CDS
GGTGCCATCATCGTTCCCTC+AGG 0.524674 6.2:-26188027 None:intergenic
ACTCCTATGCAGCTATGCTA+GGG 0.525198 6.2:+26185220 None:intergenic
GAGGTGCTAGAGAAGAAGCT+TGG 0.525337 6.2:+26187221 MS.gene019788:CDS
GAGAAAAGAGAAAGAGAGAG+AGG 0.527477 6.2:+26187202 MS.gene019788:CDS
TGGTTCAGCCGGAGCAGCAA+TGG 0.528420 6.2:+26188055 MS.gene019788:CDS
GCTAGGGGACTCAACAGTGT+TGG 0.529101 6.2:+26185236 MS.gene019788:CDS
ACAGGCGCCACCAGCAGCCG+GGG 0.531835 6.2:+26188089 MS.gene019788:CDS
ACAGTGTTGGGAACAGGAGG+AGG 0.532710 6.2:+26185249 MS.gene019788:CDS
TGATGCATGCAAGTTCATCT+AGG 0.535689 6.2:+26187701 MS.gene019788:CDS
AACAAGAGGAGTTGCACAAG+AGG 0.535913 6.2:+26187164 MS.gene019788:CDS
TGTTGTTGCACTGTTACAGT+TGG 0.536680 6.2:-26187550 None:intergenic
GCTTACCATGATGGTGGTGG+TGG 0.537546 6.2:+26185294 MS.gene019788:CDS
CTCCATGGTCACATCCGCCC+CGG 0.537791 6.2:-26188106 None:intergenic
GGGGTGGGAATAGTACTAAT+GGG 0.539998 6.2:-26186773 None:intergenic
TGCTCCGGCTGAACCATCAA+CGG 0.540154 6.2:-26188048 None:intergenic
TAATAGTAATTTGAGGAAGA+GGG 0.542471 6.2:-26186970 None:intergenic
ACATCCGCCCCGGCTGCTGG+TGG 0.542795 6.2:-26188096 None:intergenic
GGTATTGGTGGAAAATGTGT+AGG 0.543430 6.2:-26186908 None:intergenic
GGCGAAGCCTGAGGAATGAC+CGG 0.543584 6.2:-26187580 None:intergenic
ATTAGGGAATGAAGATGGTG+GGG 0.545044 6.2:-26186996 None:intergenic
GGAGGAGGCAGCTCAGGAGA+TGG 0.546943 6.2:+26185264 MS.gene019788:CDS
GGAGGTGTAGAGTTTAACAA+TGG 0.547437 6.2:-26186827 None:intergenic
TGAAGGAAAGCAACAAGAAG+AGG 0.547925 6.2:+26187911 MS.gene019788:CDS
GGAAGAGGTGGTAAATCAGA+TGG 0.550653 6.2:+26186644 MS.gene019788:CDS
TTGGATTGTGTGTAAGACAT+TGG 0.551286 6.2:-26186884 None:intergenic
TATTAGGGAATGAAGATGGT+GGG 0.553150 6.2:-26186997 None:intergenic
GTGCTAGAGAAGAAGCTTGG+AGG 0.555286 6.2:+26187224 MS.gene019788:CDS
GAGGCCTGAGGGAACGATGA+TGG 0.557139 6.2:+26188023 MS.gene019788:CDS
TTGTTGTTGTTGAGGAATGA+CGG 0.557825 6.2:-26187395 None:intergenic
GTTGTTGATGATGGTATTGG+TGG 0.559014 6.2:-26186920 None:intergenic
TGCTGCTGATGTTGTGGCAA+CGG 0.560332 6.2:-26187601 None:intergenic
GAGGAAACGACAACAATGGA+AGG 0.562272 6.2:+26187067 MS.gene019788:CDS
TGCGGCGCTTGTTGTTGTTG+AGG 0.562772 6.2:-26187403 None:intergenic
TCAACAACAACAAGCGCCGC+AGG 0.568754 6.2:+26187405 MS.gene019788:CDS
TGAAGCTGTTGTTGTAGGGG+TGG 0.568902 6.2:-26186789 None:intergenic
TATCACAAGAGAACCAAAGA+AGG 0.569305 6.2:+26186623 MS.gene019788:CDS
GGAGGTTGCAAGAGATGCAA+AGG 0.569352 6.2:+26187242 MS.gene019788:CDS
GAAATATTAGGGAATGAAGA+TGG 0.571067 6.2:-26187001 None:intergenic
TTTCAGGTGATGATGAAAGA+GGG 0.571339 6.2:+26185322 MS.gene019788:CDS
TTGATCCACCACCACCATCA+TGG 0.573497 6.2:-26185299 None:intergenic
GCTGCTGCGTTGAGGCCTGA+GGG 0.573525 6.2:+26188012 MS.gene019788:CDS
AAGAGAACCAAAGAAGGAAG+AGG 0.573797 6.2:+26186629 MS.gene019788:CDS
TTCGTCTTCGACTTCTTCGG+AGG 0.579514 6.2:+26187048 MS.gene019788:CDS
CAGGCAGAAGAACAAGGTGG+AGG 0.580136 6.2:+26187984 MS.gene019788:CDS
CAGGTTTGATGAAGAAAATG+GGG 0.580467 6.2:+26187824 MS.gene019788:CDS
GCTGGTATTGGTATTGGCAA+TGG 0.581527 6.2:-26187499 None:intergenic
GGTATTGGCAATGGTACTGC+TGG 0.582926 6.2:-26187490 None:intergenic
GTTTGTGTTTGAGTTTGTGG+TGG 0.587052 6.2:-26186749 None:intergenic
GGTACTGCTGGTACTGGCAA+TGG 0.588980 6.2:-26187478 None:intergenic
GGAGCAGGAGCTTACCATGA+TGG 0.589395 6.2:+26185285 MS.gene019788:CDS
TGATCGGCCGCGTCGAGGTG+AGG 0.591200 6.2:+26188149 MS.gene019788:CDS
CTGAGAATGCTGAGAATGAT+CGG 0.591465 6.2:+26188133 MS.gene019788:CDS
ATTTCAGGTGATGATGAAAG+AGG 0.592121 6.2:+26185321 MS.gene019788:CDS
AGAACCAAAGAAGGAAGAGG+TGG 0.595193 6.2:+26186632 MS.gene019788:CDS
GATGACGAGGACGAAGATGA+AGG 0.597081 6.2:+26188201 MS.gene019788:CDS
AGCATTCTCAGCATCCTCCA+TGG 0.598685 6.2:-26188121 None:intergenic
GAATATTATGACGATGATGA+CGG 0.600596 6.2:+26188174 MS.gene019788:CDS
GGAAGTAGTAGAAATGAAGA+GGG 0.606377 6.2:+26185348 MS.gene019788:CDS
TTCGGAGGAAACGACAACAA+TGG 0.607000 6.2:+26187063 MS.gene019788:CDS
GGAGGTTGTTGAGAAACAAG+AGG 0.607799 6.2:+26187150 MS.gene019788:CDS
CTTTGAGAGACTAATGAAGG+AGG 0.607887 6.2:+26187132 MS.gene019788:CDS
GCCTGTATAGAGCATCAAGT+TGG 0.608740 6.2:-26187966 None:intergenic
GAAGAGGAAGAGGAAATGGA+AGG 0.609651 6.2:+26187105 MS.gene019788:CDS
CAAGTATTTCAAGAAAGTGA+AGG 0.613019 6.2:+26187894 MS.gene019788:CDS
GTTGATGGAACAGTGGTGGT+AGG 0.616670 6.2:-26186848 None:intergenic
GTATTGGTGGAAAATGTGTA+GGG 0.617041 6.2:-26186907 None:intergenic
AAGGTGATTGATGCATTGAA+GGG 0.619014 6.2:-26186712 None:intergenic
TCAACAGTGTTGGGAACAGG+AGG 0.620361 6.2:+26185246 MS.gene019788:CDS
GATGGAACAGTGGTGGTAGG+AGG 0.624878 6.2:-26186845 None:intergenic
GAAGCTGTTGTTGTAGGGGT+GGG 0.625788 6.2:-26186788 None:intergenic
TTAGGGAATGAAGATGGTGG+GGG 0.627070 6.2:-26186995 None:intergenic
TCTATACAGGCAGAAGAACA+AGG 0.628687 6.2:+26187978 MS.gene019788:CDS
GAGAATGATCGGCCGCGTCG+AGG 0.629356 6.2:+26188144 MS.gene019788:CDS
ACCTAAAGGGCCATTATGGG+AGG 0.631216 6.2:+26187795 MS.gene019788:CDS
TGTGGCAACGGCGAAGCCTG+AGG 0.633518 6.2:-26187589 None:intergenic
TTCAGGTGATGATGAAAGAG+GGG 0.634874 6.2:+26185323 MS.gene019788:CDS
AGCCGGGGCGGATGTGACCA+TGG 0.639065 6.2:+26188104 MS.gene019788:CDS
AGGGTGCAGCTGCTGCGTTG+AGG 0.639190 6.2:+26188004 MS.gene019788:CDS
GGTGTAGAGTTTAACAATGG+AGG 0.640467 6.2:-26186824 None:intergenic
CTCCTATGCAGCTATGCTAG+GGG 0.640615 6.2:+26185221 None:intergenic
AGGAAACGACAACAATGGAA+GGG 0.641866 6.2:+26187068 MS.gene019788:CDS
AGGCAGAAGAACAAGGTGGA+GGG 0.643787 6.2:+26187985 MS.gene019788:CDS
GTTGGAGTTTGAACTTGTTG+CGG 0.644658 6.2:-26187532 None:intergenic
GGAGCTTACCATGATGGTGG+TGG 0.649488 6.2:+26185291 MS.gene019788:CDS
GTGTTGTTGTTCAATACAGG+AGG 0.651178 6.2:-26187373 None:intergenic
AGTGCAACAACAAACAGCAC+CGG 0.652497 6.2:+26187561 MS.gene019788:CDS
GGGGTTGGTGTAGTTTCCTG+CGG 0.653086 6.2:-26187421 None:intergenic
GGTGGCGCCTGTTGTTGTGG+AGG 0.655534 6.2:-26188078 None:intergenic
ATATTAGGGAATGAAGATGG+TGG 0.657400 6.2:-26186998 None:intergenic
TCAGGTGATGATGAAAGAGG+GGG 0.658562 6.2:+26185324 MS.gene019788:CDS
AAATGAAGCTGTTGTTGTAG+GGG 0.668647 6.2:-26186792 None:intergenic
GAAACGACAACAATGGAAGG+GGG 0.686144 6.2:+26187070 MS.gene019788:CDS
TGCATGCAAGTTCATCTAGG+TGG 0.686396 6.2:+26187704 MS.gene019788:CDS
GCAGGAGCTTACCATGATGG+TGG 0.707615 6.2:+26185288 MS.gene019788:CDS
TATTCTTCCTCACCTCGACG+CGG 0.712577 6.2:-26188156 None:intergenic
GTTGCGAAAAGTGACAACAA+TGG 0.712598 6.2:+26187670 MS.gene019788:CDS
AAGTGTAGTTGATGGAACAG+TGG 0.713309 6.2:-26186855 None:intergenic
AGGTAGTGACAATTATGAAG+TGG 0.722373 6.2:+26188221 MS.gene019788:CDS
GGTACAATAGGAATGCAAAG+AGG 0.724275 6.2:+26187845 MS.gene019788:CDS
TGTAGTTGATGGAACAGTGG+TGG 0.725823 6.2:-26186852 None:intergenic
CGGGGCGGATGTGACCATGG+AGG 0.730577 6.2:+26188107 MS.gene019788:CDS
ATACAGGCAGAAGAACAAGG+TGG 0.746845 6.2:+26187981 MS.gene019788:CDS
TGATGACGGTGATGATGACG+AGG 0.768255 6.2:+26188188 MS.gene019788:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAGAAAAAATAAAATTTC+TGG - chr6.2:26186493-26186512 None:intergenic 10.0%
!! TAAATTAAAAATATACATGA+GGG - chr6.2:26185895-26185914 None:intergenic 10.0%
!! TTAAATTAAAAATATACATG+AGG - chr6.2:26185896-26185915 None:intergenic 10.0%
!!! ATTAATTTTGTCTTTATTTT+TGG + chr6.2:26186514-26186533 MS.gene019788:intron 10.0%
!!! TATTTTTTTTATCTTTGATT+TGG + chr6.2:26185802-26185821 MS.gene019788:intron 10.0%
!!! TTAATTTTGTCTTTATTTTT+GGG + chr6.2:26186515-26186534 MS.gene019788:intron 10.0%
!! GTTGAAAAATAAAAATATGA+TGG + chr6.2:26186139-26186158 MS.gene019788:intron 15.0%
!!! TATTTTTCAACACTAAAAAT+GGG - chr6.2:26186130-26186149 None:intergenic 15.0%
!!! TTATTTTTCAACACTAAAAA+TGG - chr6.2:26186131-26186150 None:intergenic 15.0%
!! AACTTAAGTGATTAAGATAA+GGG - chr6.2:26186331-26186350 None:intergenic 20.0%
!! TAACTTAAGTGATTAAGATA+AGG - chr6.2:26186332-26186351 None:intergenic 20.0%
!! TCTTATCTCATTAAATCTTT+AGG - chr6.2:26186465-26186484 None:intergenic 20.0%
!!! AAACTTTTCTTTGCATTTTT+TGG - chr6.2:26186588-26186607 None:intergenic 20.0%
!!! ATTAAAAAGTTTGTTTCTCA+TGG - chr6.2:26186207-26186226 None:intergenic 20.0%
!!! TATATCAAAGTTGATGTAAT+TGG - chr6.2:26186286-26186305 None:intergenic 20.0%
!!! TTCAAGTTTGTAACTTTATT+TGG - chr6.2:26186060-26186079 None:intergenic 20.0%
!!! TTTTTTTTTCAGATTTCAGA+AGG - chr6.2:26185591-26185610 None:intergenic 20.0%
! AAAAATGGGTAACTGAAATA+AGG - chr6.2:26186116-26186135 None:intergenic 25.0%
! AAAATGGGTAACTGAAATAA+GGG - chr6.2:26186115-26186134 None:intergenic 25.0%
! AAGAAATCCGTTGAAATATT+AGG - chr6.2:26187016-26187035 None:intergenic 25.0%
! AGAAATCCGTTGAAATATTA+GGG - chr6.2:26187015-26187034 None:intergenic 25.0%
! TAATAGTAATTTGAGGAAGA+GGG - chr6.2:26186973-26186992 None:intergenic 25.0%
! TAGGATAAGAAGCAATTAAT+TGG - chr6.2:26186446-26186465 None:intergenic 25.0%
! TCAATAATTCAGATTTCTCA+AGG - chr6.2:26185743-26185762 None:intergenic 25.0%
! TTCATTCCCTAATATTTCAA+CGG + chr6.2:26187006-26187025 MS.gene019788:CDS 25.0%
AGACAACCAAAGAATTGAAA+TGG - chr6.2:26186361-26186380 None:intergenic 30.0%
AGAGGGTTATTAGTATTTGT+AGG - chr6.2:26186956-26186975 None:intergenic 30.0%
ATAATTCAGATTTCTCAAGG+TGG - chr6.2:26185740-26185759 None:intergenic 30.0%
CAAAATCTTTGTTCACACTT+TGG + chr6.2:26186169-26186188 MS.gene019788:intron 30.0%
CAAGTATTTCAAGAAAGTGA+AGG + chr6.2:26187894-26187913 MS.gene019788:CDS 30.0%
GAAATATTAGGGAATGAAGA+TGG - chr6.2:26187004-26187023 None:intergenic 30.0%
GAATATTATGACGATGATGA+CGG + chr6.2:26188174-26188193 MS.gene019788:CDS 30.0%
GAGGGTTATTAGTATTTGTA+GGG - chr6.2:26186955-26186974 None:intergenic 30.0%
GCAAAGGATTAATAGAGAAA+GGG + chr6.2:26187258-26187277 MS.gene019788:CDS 30.0%
GTAATAGTAATTTGAGGAAG+AGG - chr6.2:26186974-26186993 None:intergenic 30.0%
TACTTTGGCTAATAGGAAAA+TGG + chr6.2:26186538-26186557 MS.gene019788:intron 30.0%
TCAGGTTTGATGAAGAAAAT+GGG + chr6.2:26187823-26187842 MS.gene019788:CDS 30.0%
TGCAAAGGATTAATAGAGAA+AGG + chr6.2:26187257-26187276 MS.gene019788:CDS 30.0%
TTCAAAGATGCAAGTGTTAA+AGG + chr6.2:26185456-26185475 MS.gene019788:CDS 30.0%
! GATATGAAGTACCAAGAAAA+TGG + chr6.2:26187772-26187791 MS.gene019788:CDS 30.0%
! TTCAGGTTTGATGAAGAAAA+TGG + chr6.2:26187822-26187841 MS.gene019788:CDS 30.0%
! TTTCTTTGAGAGACTAATGA+AGG + chr6.2:26187129-26187148 MS.gene019788:CDS 30.0%
!! GGAAGAAAATCTTTGCTTTT+TGG - chr6.2:26186091-26186110 None:intergenic 30.0%
!! TTTGTTGTTGTTGTTGATGA+TGG - chr6.2:26186932-26186951 None:intergenic 30.0%
!!! GTCTTTATTTTTGGGTACTT+TGG + chr6.2:26186523-26186542 MS.gene019788:intron 30.0%
!!! TTTTTTCAGATTTCAGAAGG+TGG - chr6.2:26185588-26185607 None:intergenic 30.0%
AAATGAAGCTGTTGTTGTAG+GGG - chr6.2:26186795-26186814 None:intergenic 35.0%
AAGGTGATTGATGCATTGAA+GGG - chr6.2:26186715-26186734 None:intergenic 35.0%
AAGTGATTAAGATAAGGGAG+AGG - chr6.2:26186326-26186345 None:intergenic 35.0%
AAGTGTTAAAGGTCCCTTAT+GGG + chr6.2:26185467-26185486 MS.gene019788:CDS 35.0%
AATAGGAAAATGGCAGATCT+TGG + chr6.2:26186548-26186567 MS.gene019788:intron 35.0%
ACCAAGAAAATGGACCTAAA+GGG + chr6.2:26187782-26187801 MS.gene019788:CDS 35.0%
AGAAATGAAGCTGTTGTTGT+AGG - chr6.2:26186797-26186816 None:intergenic 35.0%
AGGTAGTGACAATTATGAAG+TGG + chr6.2:26188221-26188240 MS.gene019788:CDS 35.0%
ATAGGAAAATGGCAGATCTT+GGG + chr6.2:26186549-26186568 MS.gene019788:intron 35.0%
ATATTAGGGAATGAAGATGG+TGG - chr6.2:26187001-26187020 None:intergenic 35.0%
CAGGTTTGATGAAGAAAATG+GGG + chr6.2:26187824-26187843 MS.gene019788:CDS 35.0%
CTTGAAACTTCATCCCATAA+GGG - chr6.2:26185483-26185502 None:intergenic 35.0%
CTTGCTCCATTTCAATTCTT+TGG + chr6.2:26186352-26186371 MS.gene019788:intron 35.0%
GAAATGAAGCTGTTGTTGTA+GGG - chr6.2:26186796-26186815 None:intergenic 35.0%
GGAAGTAGTAGAAATGAAGA+GGG + chr6.2:26185348-26185367 MS.gene019788:CDS 35.0%
GTTGAAGATAAGGTCTGATA+TGG + chr6.2:26185425-26185444 MS.gene019788:CDS 35.0%
TACCAAGAAAATGGACCTAA+AGG + chr6.2:26187781-26187800 MS.gene019788:CDS 35.0%
TACTAAAGATGCTGCTGTTA+TGG + chr6.2:26187312-26187331 MS.gene019788:CDS 35.0%
TATCACAAGAGAACCAAAGA+AGG + chr6.2:26186623-26186642 MS.gene019788:CDS 35.0%
TATTAGGGAATGAAGATGGT+GGG - chr6.2:26187000-26187019 None:intergenic 35.0%
TGAAGAAAATGGGGTACAAT+AGG + chr6.2:26187833-26187852 MS.gene019788:CDS 35.0%
TGGAAGTAGTAGAAATGAAG+AGG + chr6.2:26185347-26185366 MS.gene019788:CDS 35.0%
TGTGTGTAAGACATTGGAAT+TGG - chr6.2:26186881-26186900 None:intergenic 35.0%
TTGGATTGTGTGTAAGACAT+TGG - chr6.2:26186887-26186906 None:intergenic 35.0%
! AAAGAGGTGCAAAGAGAAAT+GGG + chr6.2:26187861-26187880 MS.gene019788:CDS 35.0%
! AAAGCAACTGTTTCTTGTCT+TGG - chr6.2:26185405-26185424 None:intergenic 35.0%
! ATTTCAGGTGATGATGAAAG+AGG + chr6.2:26185321-26185340 MS.gene019788:CDS 35.0%
! CAGTTGCTTTGTTGAAGATA+AGG + chr6.2:26185415-26185434 MS.gene019788:CDS 35.0%
! GTATTGGTGGAAAATGTGTA+GGG - chr6.2:26186910-26186929 None:intergenic 35.0%
! TTGTTGTTGTTGAGGAATGA+CGG - chr6.2:26187398-26187417 None:intergenic 35.0%
! TTTCAGGTGATGATGAAAGA+GGG + chr6.2:26185322-26185341 MS.gene019788:CDS 35.0%
!! CATTGAAGGGTTGTTTTCAA+GGG - chr6.2:26186702-26186721 None:intergenic 35.0%
!! GAAGTTTTGGTGGTAATAGA+TGG + chr6.2:26185379-26185398 MS.gene019788:CDS 35.0%
!! GTTGTTGTTGATGATGGTAT+TGG - chr6.2:26186926-26186945 None:intergenic 35.0%
!! TTTTGGGTACTTTGGCTAAT+AGG + chr6.2:26186531-26186550 MS.gene019788:intron 35.0%
AAGAGAACCAAAGAAGGAAG+AGG + chr6.2:26186629-26186648 MS.gene019788:CDS 40.0%
AAGTTCGTCTTCGACTTCTT+CGG + chr6.2:26187045-26187064 MS.gene019788:CDS 40.0%
ACCAACTTGATGCTCTATAC+AGG + chr6.2:26187965-26187984 MS.gene019788:CDS 40.0%
AGGAAACGACAACAATGGAA+GGG + chr6.2:26187068-26187087 MS.gene019788:CDS 40.0%
ATGGGTAACTGAAATAAGGG+AGG - chr6.2:26186112-26186131 None:intergenic 40.0%
ATTAGGGAATGAAGATGGTG+GGG - chr6.2:26186999-26187018 None:intergenic 40.0%
CAAGTGTTAAAGGTCCCTTA+TGG + chr6.2:26185466-26185485 MS.gene019788:CDS 40.0%
CCTTATGGGATGAAGTTTCA+AGG + chr6.2:26185481-26185500 MS.gene019788:CDS 40.0%
CCTTGAAACTTCATCCCATA+AGG - chr6.2:26185484-26185503 None:intergenic 40.0%
CTGAGAATGCTGAGAATGAT+CGG + chr6.2:26188133-26188152 MS.gene019788:CDS 40.0%
GAAGGTGATTGATGCATTGA+AGG - chr6.2:26186716-26186735 None:intergenic 40.0%
GAGAAAAGAGAAAGAGAGAG+AGG + chr6.2:26187202-26187221 MS.gene019788:CDS 40.0%
GGACATGTCTTTGAATCTTC+TGG - chr6.2:26187937-26187956 None:intergenic 40.0%
GGTACAATAGGAATGCAAAG+AGG + chr6.2:26187845-26187864 MS.gene019788:CDS 40.0%
GGTGTAGAGTTTAACAATGG+AGG - chr6.2:26186827-26186846 None:intergenic 40.0%
GTTGCGAAAAGTGACAACAA+TGG + chr6.2:26187670-26187689 MS.gene019788:CDS 40.0%
TAGTAGAAATGAAGAGGGTG+TGG + chr6.2:26185353-26185372 MS.gene019788:CDS 40.0%
TCTATACAGGCAGAAGAACA+AGG + chr6.2:26187978-26187997 MS.gene019788:CDS 40.0%
TGAAGGAAAGCAACAAGAAG+AGG + chr6.2:26187911-26187930 MS.gene019788:CDS 40.0%
TGATGCATGCAAGTTCATCT+AGG + chr6.2:26187701-26187720 MS.gene019788:CDS 40.0%
TGTTGTTGCACTGTTACAGT+TGG - chr6.2:26187553-26187572 None:intergenic 40.0%
TTTACCACCTCTTCCTTCTT+TGG - chr6.2:26186639-26186658 None:intergenic 40.0%
! AATGCCTCAACCTCAGTTTT+TGG - chr6.2:26187730-26187749 None:intergenic 40.0%
! CAAAGAGGTGCAAAGAGAAA+TGG + chr6.2:26187860-26187879 MS.gene019788:CDS 40.0%
! CTTTGAGAGACTAATGAAGG+AGG + chr6.2:26187132-26187151 MS.gene019788:CDS 40.0%
! GGAATTGGAAGTGTAGTTGA+TGG - chr6.2:26186866-26186885 None:intergenic 40.0%
! GGAGGTGTAGAGTTTAACAA+TGG - chr6.2:26186830-26186849 None:intergenic 40.0%
! GGGGGTGTAATAGTAATTTG+AGG - chr6.2:26186980-26186999 None:intergenic 40.0%
! GGTGTTTGTGTTTGAGTTTG+TGG - chr6.2:26186755-26186774 None:intergenic 40.0%
! GTGTTGTTGTTCAATACAGG+AGG - chr6.2:26187376-26187395 None:intergenic 40.0%
! GTTTGTGTTTGAGTTTGTGG+TGG - chr6.2:26186752-26186771 None:intergenic 40.0%
! TTCAGGTGATGATGAAAGAG+GGG + chr6.2:26185323-26185342 MS.gene019788:CDS 40.0%
!! AAGTGTAGTTGATGGAACAG+TGG - chr6.2:26186858-26186877 None:intergenic 40.0%
!! ACGGTGTTGTTGTTCAATAC+AGG - chr6.2:26187379-26187398 None:intergenic 40.0%
!! GCATCAAGTTGGTGAAAGTA+AGG - chr6.2:26187958-26187977 None:intergenic 40.0%
!! GCATTGAAGGGTTGTTTTCA+AGG - chr6.2:26186703-26186722 None:intergenic 40.0%
!! GGTATTGCTGGTATTGGTAT+TGG - chr6.2:26187508-26187527 None:intergenic 40.0%
!! GGTATTGGTGGAAAATGTGT+AGG - chr6.2:26186911-26186930 None:intergenic 40.0%
!! GTTGGAGTTTGAACTTGTTG+CGG - chr6.2:26187535-26187554 None:intergenic 40.0%
!! GTTGTTGATGATGGTATTGG+TGG - chr6.2:26186923-26186942 None:intergenic 40.0%
AACAAGAGGAGTTGCACAAG+AGG + chr6.2:26187164-26187183 MS.gene019788:CDS 45.0%
ACAGCAGCAAGTGACGAATA+TGG + chr6.2:26187645-26187664 MS.gene019788:CDS 45.0%
AGAACCAAAGAAGGAAGAGG+TGG + chr6.2:26186632-26186651 MS.gene019788:CDS 45.0%
AGGGGTGGGAATAGTACTAA+TGG - chr6.2:26186777-26186796 None:intergenic 45.0%
AGTGCAACAACAAACAGCAC+CGG + chr6.2:26187561-26187580 MS.gene019788:CDS 45.0%
ATACAGGCAGAAGAACAAGG+TGG + chr6.2:26187981-26188000 MS.gene019788:CDS 45.0%
ATCTAGGTGGCCAAAAACTG+AGG + chr6.2:26187717-26187736 MS.gene019788:CDS 45.0%
ATGGACCTAAAGGGCCATTA+TGG + chr6.2:26187791-26187810 MS.gene019788:CDS 45.0%
CAGATTTCAGAAGGTGGCAT+TGG - chr6.2:26185582-26185601 None:intergenic 45.0%
CCATTATGGGAGGAGATTTC+AGG + chr6.2:26187805-26187824 MS.gene019788:CDS 45.0%
CCTGAAATCTCCTCCCATAA+TGG - chr6.2:26187808-26187827 None:intergenic 45.0%
GAAACGACAACAATGGAAGG+GGG + chr6.2:26187070-26187089 MS.gene019788:CDS 45.0%
GAAGAGGAAGAGGAAATGGA+AGG + chr6.2:26187105-26187124 MS.gene019788:CDS 45.0%
GAGGAAACGACAACAATGGA+AGG + chr6.2:26187067-26187086 MS.gene019788:CDS 45.0%
GGAAACGACAACAATGGAAG+GGG + chr6.2:26187069-26187088 MS.gene019788:CDS 45.0%
GGAAGAGGTGGTAAATCAGA+TGG + chr6.2:26186644-26186663 MS.gene019788:CDS 45.0%
GGAGGTTGTTGAGAAACAAG+AGG + chr6.2:26187150-26187169 MS.gene019788:CDS 45.0%
GGGGTGGGAATAGTACTAAT+GGG - chr6.2:26186776-26186795 None:intergenic 45.0%
TGCATGCAAGTTCATCTAGG+TGG + chr6.2:26187704-26187723 MS.gene019788:CDS 45.0%
TGGACCTAAAGGGCCATTAT+GGG + chr6.2:26187792-26187811 MS.gene019788:CDS 45.0%
TGGTGGAAAATGTGTAGGGT+TGG - chr6.2:26186906-26186925 None:intergenic 45.0%
TTCGGAGGAAACGACAACAA+TGG + chr6.2:26187063-26187082 MS.gene019788:CDS 45.0%
! GCCCTTTAGGTCCATTTTCT+TGG - chr6.2:26187786-26187805 None:intergenic 45.0%
! GCCTGTATAGAGCATCAAGT+TGG - chr6.2:26187969-26187988 None:intergenic 45.0%
! GGTGTAGGTATTGCTGGTAT+TGG - chr6.2:26187514-26187533 None:intergenic 45.0%
! TCAGGTGATGATGAAAGAGG+GGG + chr6.2:26185324-26185343 MS.gene019788:CDS 45.0%
! TGTGTTTGAGTTTGTGGTGG+TGG - chr6.2:26186749-26186768 None:intergenic 45.0%
! TTAGGGAATGAAGATGGTGG+GGG - chr6.2:26186998-26187017 None:intergenic 45.0%
!! GAGGGTGTGGATAGAAGTTT+TGG + chr6.2:26185366-26185385 MS.gene019788:CDS 45.0%
!! GCTGGTATTGGTATTGGCAA+TGG - chr6.2:26187502-26187521 None:intergenic 45.0%
!! GGTGTGGATAGAAGTTTTGG+TGG + chr6.2:26185369-26185388 MS.gene019788:CDS 45.0%
!! GTTTGAACTTGTTGCGGTGT+AGG - chr6.2:26187529-26187548 None:intergenic 45.0%
!! TGTAGTTGATGGAACAGTGG+TGG - chr6.2:26186855-26186874 None:intergenic 45.0%
!! GAAAAATTAAATTAATAAAT+GGG - chr6.2:26185685-26185704 None:intergenic 5.0%
!! TGAAAAATTAAATTAATAAA+TGG - chr6.2:26185686-26185705 None:intergenic 5.0%
ACATCAGCAGCAGCAACAAC+AGG + chr6.2:26187612-26187631 MS.gene019788:CDS 50.0%
ACCTAAAGGGCCATTATGGG+AGG + chr6.2:26187795-26187814 MS.gene019788:CDS 50.0%
AGCATTCTCAGCATCCTCCA+TGG - chr6.2:26188124-26188143 None:intergenic 50.0%
AGGCAGAAGAACAAGGTGGA+GGG + chr6.2:26187985-26188004 MS.gene019788:CDS 50.0%
CTAGGGGACTCAACAGTGTT+GGG + chr6.2:26185237-26185256 MS.gene019788:CDS 50.0%
GAAGCTGTTGTTGTAGGGGT+GGG - chr6.2:26186791-26186810 None:intergenic 50.0%
GACGGAAGAGGAAGAGGAAA+TGG + chr6.2:26187101-26187120 MS.gene019788:CDS 50.0%
GATGACGAGGACGAAGATGA+AGG + chr6.2:26188201-26188220 MS.gene019788:CDS 50.0%
GGAGGTTGCAAGAGATGCAA+AGG + chr6.2:26187242-26187261 MS.gene019788:CDS 50.0%
GGAGTTGCACAAGAGGTTCT+TGG + chr6.2:26187171-26187190 MS.gene019788:CDS 50.0%
GTGCTAGAGAAGAAGCTTGG+AGG + chr6.2:26187224-26187243 MS.gene019788:CDS 50.0%
GTGGCCAAAAACTGAGGTTG+AGG + chr6.2:26187723-26187742 MS.gene019788:CDS 50.0%
TATTCTTCCTCACCTCGACG+CGG - chr6.2:26188159-26188178 None:intergenic 50.0%
TCCTCCCATAATGGCCCTTT+AGG - chr6.2:26187799-26187818 None:intergenic 50.0%
TGAAGCTGTTGTTGTAGGGG+TGG - chr6.2:26186792-26186811 None:intergenic 50.0%
TGCTGCTGATGTTGTGGCAA+CGG - chr6.2:26187604-26187623 None:intergenic 50.0%
TGTTGCTGCTGCTGATGTTG+TGG - chr6.2:26187610-26187629 None:intergenic 50.0%
TTCGTCTTCGACTTCTTCGG+AGG + chr6.2:26187048-26187067 MS.gene019788:CDS 50.0%
TTGATCCACCACCACCATCA+TGG - chr6.2:26185302-26185321 None:intergenic 50.0%
! AACGATGATGGCACCGTTGA+TGG + chr6.2:26188035-26188054 MS.gene019788:CDS 50.0%
! GACTCAACAGTGTTGGGAAC+AGG + chr6.2:26185243-26185262 MS.gene019788:CDS 50.0%
! GAGGTGCTAGAGAAGAAGCT+TGG + chr6.2:26187221-26187240 MS.gene019788:CDS 50.0%
! GTTGATGGAACAGTGGTGGT+AGG - chr6.2:26186851-26186870 None:intergenic 50.0%
! TCAACAGTGTTGGGAACAGG+AGG + chr6.2:26185246-26185265 MS.gene019788:CDS 50.0%
! TGTTGCGGTGTAGGTATTGC+TGG - chr6.2:26187520-26187539 None:intergenic 50.0%
!! GGTATTGGCAATGGTACTGC+TGG - chr6.2:26187493-26187512 None:intergenic 50.0%
!! GGTGGTGGTGGATCAATTTC+AGG + chr6.2:26185306-26185325 MS.gene019788:CDS 50.0%
!! GGTGGTGGTGGTGTTATTGA+AGG - chr6.2:26186734-26186753 None:intergenic 50.0%
!! GTTTGAGTTTGTGGTGGTGG+TGG - chr6.2:26186746-26186765 None:intergenic 50.0%
!! TGATGACGGTGATGATGACG+AGG + chr6.2:26188188-26188207 MS.gene019788:CDS 50.0%
CAGGCAGAAGAACAAGGTGG+AGG + chr6.2:26187984-26188003 MS.gene019788:CDS 55.0%
CGAATCGACGGAAGAGGAAG+AGG + chr6.2:26187095-26187114 MS.gene019788:CDS 55.0%
GATGGAACAGTGGTGGTAGG+AGG - chr6.2:26186848-26186867 None:intergenic 55.0%
GCAATGGCCTCCACAACAAC+AGG + chr6.2:26188071-26188090 MS.gene019788:CDS 55.0%
GCAGCAGCAACAACAGGTTC+AGG + chr6.2:26187618-26187637 MS.gene019788:CDS 55.0%
GCAGGAGCTTACCATGATGG+TGG + chr6.2:26185288-26185307 MS.gene019788:CDS 55.0%
GCTAGGGGACTCAACAGTGT+TGG + chr6.2:26185236-26185255 MS.gene019788:CDS 55.0%
GGAGCAGGAGCTTACCATGA+TGG + chr6.2:26185285-26185304 MS.gene019788:CDS 55.0%
GGCAATGGTACTGCTGGTAC+TGG - chr6.2:26187487-26187506 None:intergenic 55.0%
TGCTCCGGCTGAACCATCAA+CGG - chr6.2:26188051-26188070 None:intergenic 55.0%
TGGAAGGGGGATCGAATCGA+CGG + chr6.2:26187083-26187102 MS.gene019788:CDS 55.0%
! ACAGTGTTGGGAACAGGAGG+AGG + chr6.2:26185249-26185268 MS.gene019788:CDS 55.0%
! GGTGATGATGAAAGAGGGGG+TGG + chr6.2:26185327-26185346 MS.gene019788:CDS 55.0%
! TCAACAACAACAAGCGCCGC+AGG + chr6.2:26187405-26187424 MS.gene019788:CDS 55.0%
! TTGAGGTGGCGGTGGTTTGT+TGG - chr6.2:26188250-26188269 None:intergenic 55.0%
!! AACAGCACCGGTCATTCCTC+AGG + chr6.2:26187573-26187592 MS.gene019788:CDS 55.0%
!! AATGGTGCTGCTGCTGGTGT+CGG - chr6.2:26187463-26187482 None:intergenic 55.0%
!! GCTTACCATGATGGTGGTGG+TGG + chr6.2:26185294-26185313 MS.gene019788:CDS 55.0%
!! GGAGCTTACCATGATGGTGG+TGG + chr6.2:26185291-26185310 MS.gene019788:CDS 55.0%
!! GGGGTTGGTGTAGTTTCCTG+CGG - chr6.2:26187424-26187443 None:intergenic 55.0%
!! GGTACTGCTGGTACTGGCAA+TGG - chr6.2:26187481-26187500 None:intergenic 55.0%
!! TCGGTGTCGGTGTTGGTGTT+GGG - chr6.2:26187444-26187463 None:intergenic 55.0%
!! TGCGGCGCTTGTTGTTGTTG+AGG - chr6.2:26187406-26187425 None:intergenic 55.0%
GAGGCCTGAGGGAACGATGA+TGG + chr6.2:26188023-26188042 MS.gene019788:CDS 60.0%
GGCGAAGCCTGAGGAATGAC+CGG - chr6.2:26187583-26187602 None:intergenic 60.0%
GGGGATCGAATCGACGGAAG+AGG + chr6.2:26187089-26187108 MS.gene019788:CDS 60.0%
TGGTTCAGCCGGAGCAGCAA+TGG + chr6.2:26188055-26188074 MS.gene019788:CDS 60.0%
TGTGGAGGCCATTGCTGCTC+CGG - chr6.2:26188066-26188085 None:intergenic 60.0%
! GGTGCCATCATCGTTCCCTC+AGG - chr6.2:26188030-26188049 None:intergenic 60.0%
!! ACTGGCAATGGTGCTGCTGC+TGG - chr6.2:26187469-26187488 None:intergenic 60.0%
!! CGGTGTCGGTGTTGGTGTTG+GGG - chr6.2:26187443-26187462 None:intergenic 60.0%
!! GGCACCGTTGATGGTTCAGC+CGG + chr6.2:26188044-26188063 MS.gene019788:CDS 60.0%
!! GTCGGTGTCGGTGTTGGTGT+TGG - chr6.2:26187445-26187464 None:intergenic 60.0%
!! GTCGGTGTTGGTGTTGGGGT+TGG - chr6.2:26187439-26187458 None:intergenic 60.0%
AGCTGCTGCGTTGAGGCCTG+AGG + chr6.2:26188011-26188030 MS.gene019788:CDS 65.0%
AGGGTGCAGCTGCTGCGTTG+AGG + chr6.2:26188004-26188023 MS.gene019788:CDS 65.0%
CTCCATGGTCACATCCGCCC+CGG - chr6.2:26188109-26188128 None:intergenic 65.0%
GAGAATGATCGGCCGCGTCG+AGG + chr6.2:26188144-26188163 MS.gene019788:CDS 65.0%
GCTGCTGCGTTGAGGCCTGA+GGG + chr6.2:26188012-26188031 MS.gene019788:CDS 65.0%
GGAACAGGAGGAGGCAGCTC+AGG + chr6.2:26185258-26185277 MS.gene019788:CDS 65.0%
GGAGGAGGCAGCTCAGGAGA+TGG + chr6.2:26185264-26185283 MS.gene019788:CDS 65.0%
GGCAGCTCAGGAGATGGAGC+AGG + chr6.2:26185270-26185289 MS.gene019788:CDS 65.0%
GGTGGCGCCTGTTGTTGTGG+AGG - chr6.2:26188081-26188100 None:intergenic 65.0%
TGTGGCAACGGCGAAGCCTG+AGG - chr6.2:26187592-26187611 None:intergenic 65.0%
! GCTGGTGGCGCCTGTTGTTG+TGG - chr6.2:26188084-26188103 None:intergenic 65.0%
!! GCTGCTGCTGGTGTCGGTGT+CGG - chr6.2:26187457-26187476 None:intergenic 65.0%
!! GCTGGTGTCGGTGTCGGTGT+TGG - chr6.2:26187451-26187470 None:intergenic 65.0%
AACAGGCGCCACCAGCAGCC+GGG + chr6.2:26188088-26188107 MS.gene019788:CDS 70.0%
AGCCGGGGCGGATGTGACCA+TGG + chr6.2:26188104-26188123 MS.gene019788:CDS 70.0%
CAACAGGCGCCACCAGCAGC+CGG + chr6.2:26188087-26188106 MS.gene019788:CDS 70.0%
CGGGGCGGATGTGACCATGG+AGG + chr6.2:26188107-26188126 MS.gene019788:CDS 70.0%
TGATCGGCCGCGTCGAGGTG+AGG + chr6.2:26188149-26188168 MS.gene019788:CDS 70.0%
ACAGGCGCCACCAGCAGCCG+GGG + chr6.2:26188089-26188108 MS.gene019788:CDS 75.0%
ACATCCGCCCCGGCTGCTGG+TGG - chr6.2:26188099-26188118 None:intergenic 75.0%
GTCACATCCGCCCCGGCTGC+TGG - chr6.2:26188102-26188121 None:intergenic 75.0%
! GGCGCCACCAGCAGCCGGGG+CGG + chr6.2:26188092-26188111 MS.gene019788:CDS 85.0%


Chromosome Type Strat End Strand Name
chr6.2 gene 26185234 26188272 26185234 ID=MS.gene019788
chr6.2 mRNA 26185234 26188272 26185234 ID=MS.gene019788.t1;Parent=MS.gene019788
chr6.2 exon 26185234 26185502 26185234 ID=MS.gene019788.t1.exon1;Parent=MS.gene019788.t1
chr6.2 CDS 26185234 26185502 26185234 ID=cds.MS.gene019788.t1;Parent=MS.gene019788.t1
chr6.2 exon 26186553 26188272 26186553 ID=MS.gene019788.t1.exon2;Parent=MS.gene019788.t1
chr6.2 CDS 26186553 26188272 26186553 ID=cds.MS.gene019788.t1;Parent=MS.gene019788.t1
Gene Sequence

>MS.gene019788

ATGCTAGGGGACTCAACAGTGTTGGGAACAGGAGGAGGCAGCTCAGGAGATGGAGCAGGAGCTTACCATGATGGTGGTGGTGGATCAATTTCAGGTGATGATGAAAGAGGGGGTGGAAGTAGTAGAAATGAAGAGGGTGTGGATAGAAGTTTTGGTGGTAATAGATGGCCAAGACAAGAAACAGTTGCTTTGTTGAAGATAAGGTCTGATATGGATGTTGCTTTCAAAGATGCAAGTGTTAAAGGTCCCTTATGGGATGAAGTTTCAAGGTTAGTCAAAAAAAAAAATTCAATTTTTTTCATTTTTTTGATTTTAATTATTTGAGATTGTATTCAACTTGTTAATCCAATGCCACCTTCTGAAATCTGAAAAAAAAATTCACTTTGAGTTCATGTTTTGTGTATTAATTTTTTTTTTCAATGTGTTTCAATTTTCATTTCATCTCAATCCCATTTATTAATTTAATTTTTCAATTTTTGATATATTTTTTACTTGATTCAATGCCACCTTGAGAAATCTGAATTATTGAATGTGTTTCAATTTTGATTTTGATTTCACTTCAATTTCATATTTTTTTTATCTTTGATTTGGACTTGTTTTCATGTAAAGATGAATTTTTTAATTTTTTTTTGTTATTATTGAATTGATTATTGAAGTTCCCTCATGTATATTTTTAATTTAAAGATATAAGTACTGTTTATGAAAAATTAAATAATTTAGAGATGTGTGCAAGCATCTCTCTATGACTCTATCTATCTATGATATGATGACTTTGATGTGATTTGCTTTTCTGACATTCATTTTGATACATGTTGTATTTTTACCAAATAAAGTTACAAACTTGAATTGAGTCACCAAAAAGCAAAGATTTTCTTCCTCCCTTATTTCAGTTACCCATTTTTAGTGTTGAAAAATAAAAATATGATGGTAGATTACAAAATCTTTGTTCACACTTTGGTTCATGTGTTTTCCATGAGAAACAAACTTTTTAATTTTTTCAACATTTTACGCTATTTAATTTCTTGTCATTATTAAAAAAAATCTTCACTCCAATTACATCAACTTTGATATATAATAATTTTTTATTCACCTCTCCCTTATCTTAATCACTTAAGTTACTTGCTCCATTTCAATTCTTTGGTTGTCTAAATTGATTTATTTATTTTTATTATTATTATTTTTGACTCAATTCATTTATTATCTTATGCACCAATTAATTGCTTCTTATCCTAAAGATTTAATGAGATAAGAAAAAGCCAGAAATTTTATTTTTTCTTTTAATTAATTTTGTCTTTATTTTTGGGTACTTTGGCTAATAGGAAAATGGCAGATCTTGGGTATCAAAGAAACTCCAAAAAATGCAAAGAAAAGTTTGAGAATGTTTACAAATATCACAAGAGAACCAAAGAAGGAAGAGGTGGTAAATCAGATGGTAAAACTTATAGATTCTTTGATCAATTACAAGCCCTTGAAAACAACCCTTCAATGCATCAATCACCTTCAATAACACCACCACCACCACAAACTCAAACACAAACACCCATTAGTACTATTCCCACCCCTACAACAACAGCTTCATTTCTATCTGCACCTCCATTGTTAAACTCTACACCTCCTACCACCACTGTTCCATCAACTACACTTCCAATTCCAATGTCTTACACACAATCCAACCCTACACATTTTCCACCAATACCATCATCAACAACAACAACAAACCCTACAAATACTAATAACCCTCTTCCTCAAATTACTATTACACCCCCACCATCTTCATTCCCTAATATTTCAACGGATTTCTTCTCGAATTCAAGTTCGTCTTCGACTTCTTCGGAGGAAACGACAACAATGGAAGGGGGATCGAATCGACGGAAGAGGAAGAGGAAATGGAAGGATTTCTTTGAGAGACTAATGAAGGAGGTTGTTGAGAAACAAGAGGAGTTGCACAAGAGGTTCTTGGAAGCTATAGAGAAAAGAGAAAGAGAGAGAGGTGCTAGAGAAGAAGCTTGGAGGTTGCAAGAGATGCAAAGGATTAATAGAGAAAGGGAAATTCTTGCTCAAGAGAGATCTATTGCTGCTACTAAAGATGCTGCTGTTATGGCTTTTTTGCAGAAGATTGCTGAACAACAAAATCTTGTTCCTCCTGTATTGAACAACAACACCGTCATTCCTCAACAACAACAAGCGCCGCAGGAAACTACACCAACCCCAACACCAACACCGACACCGACACCAGCAGCAGCACCATTGCCAGTACCAGCAGTACCATTGCCAATACCAATACCAGCAATACCTACACCGCAACAAGTTCAAACTCCAACTGTAACAGTGCAACAACAAACAGCACCGGTCATTCCTCAGGCTTCGCCGTTGCCACAACATCAGCAGCAGCAACAACAGGTTCAGGTACAACAGCAGCAAGTGACGAATATGGAAGTTGCGAAAAGTGACAACAATGGTGAGAGTATGATGCATGCAAGTTCATCTAGGTGGCCAAAAACTGAGGTTGAGGCATTGATAAAGCTGAGAACAACTCTTGATATGAAGTACCAAGAAAATGGACCTAAAGGGCCATTATGGGAGGAGATTTCAGGTTTGATGAAGAAAATGGGGTACAATAGGAATGCAAAGAGGTGCAAAGAGAAATGGGAGAACATCAACAAGTATTTCAAGAAAGTGAAGGAAAGCAACAAGAAGAGGCCAGAAGATTCAAAGACATGTCCTTACTTTCACCAACTTGATGCTCTATACAGGCAGAAGAACAAGGTGGAGGGTGCAGCTGCTGCGTTGAGGCCTGAGGGAACGATGATGGCACCGTTGATGGTTCAGCCGGAGCAGCAATGGCCTCCACAACAACAGGCGCCACCAGCAGCCGGGGCGGATGTGACCATGGAGGATGCTGAGAATGCTGAGAATGATCGGCCGCGTCGAGGTGAGGAAGAATATTATGACGATGATGACGGTGATGATGACGAGGACGAAGATGAAGGTAGTGACAATTATGAAGTGGTTGCCAACAAACCACCGCCACCTCAATAA
Protein sequence

>MS.gene019788.t1

MLGDSTVLGTGGGSSGDGAGAYHDGGGGSISGDDERGGGSSRNEEGVDRSFGGNRWPRQETVALLKIRSDMDVAFKDASVKGPLWDEVSRKMADLGYQRNSKKCKEKFENVYKYHKRTKEGRGGKSDGKTYRFFDQLQALENNPSMHQSPSITPPPPQTQTQTPISTIPTPTTTASFLSAPPLLNSTPPTTTVPSTTLPIPMSYTQSNPTHFPPIPSSTTTTNPTNTNNPLPQITITPPPSSFPNISTDFFSNSSSSSTSSEETTTMEGGSNRRKRKRKWKDFFERLMKEVVEKQEELHKRFLEAIEKRERERGAREEAWRLQEMQRINREREILAQERSIAATKDAAVMAFLQKIAEQQNLVPPVLNNNTVIPQQQQAPQETTPTPTPTPTPTPAAAPLPVPAVPLPIPIPAIPTPQQVQTPTVTVQQQTAPVIPQASPLPQHQQQQQQVQVQQQQVTNMEVAKSDNNGESMMHASSSRWPKTEVEALIKLRTTLDMKYQENGPKGPLWEEISGLMKKMGYNRNAKRCKEKWENINKYFKKVKESNKKRPEDSKTCPYFHQLDALYRQKNKVEGAAAALRPEGTMMAPLMVQPEQQWPPQQQAPPAAGADVTMEDAENAENDRPRRGEEEYYDDDDGDDDEDEDEGSDNYEVVANKPPPPQ