Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019944.t1 | KEH25659.1 | 89.3 | 755 | 77 | 3 | 1 | 751 | 21 | 775 | 0.00E+00 | 1262.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019944.t1 | Q4KKX4 | 35.2 | 105 | 67 | 1 | 11 | 115 | 383 | 486 | 7.5e-13 | 77.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019944.t1 | A0A072U7C0 | 89.3 | 755 | 77 | 3 | 1 | 751 | 21 | 775 | 0.0e+00 | 1262.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene019944.t1 | TF | MYB |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019944.t1 | MTR_6g033350 | 90.331 | 755 | 69 | 3 | 1 | 751 | 21 | 775 | 0.0 | 1347 |
| MS.gene019944.t1 | MTR_1g095570 | 49.313 | 582 | 239 | 13 | 1 | 571 | 308 | 844 | 2.14e-154 | 481 |
| MS.gene019944.t1 | MTR_1g095570 | 43.478 | 161 | 56 | 7 | 581 | 725 | 929 | 1070 | 4.37e-21 | 99.8 |
| MS.gene019944.t1 | MTR_1g095570 | 49.313 | 582 | 239 | 13 | 1 | 571 | 740 | 1276 | 2.86e-150 | 478 |
| MS.gene019944.t1 | MTR_1g095570 | 43.478 | 161 | 56 | 7 | 581 | 725 | 1361 | 1502 | 7.47e-21 | 99.0 |
| MS.gene019944.t1 | MTR_6g033345 | 68.880 | 241 | 73 | 2 | 151 | 390 | 2 | 241 | 3.92e-98 | 303 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019944.t1 | AT3G52250 | 36.652 | 442 | 249 | 10 | 1 | 419 | 808 | 1241 | 2.41e-66 | 240 |
| MS.gene019944.t1 | AT3G52250 | 36.652 | 442 | 249 | 10 | 1 | 419 | 808 | 1241 | 2.41e-66 | 240 |
Find 172 sgRNAs with CRISPR-Local
Find 206 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAGAGAAATTTGCTTTCTT+TGG | 0.168603 | 6.1:+12950832 | MS.gene019944:CDS |
| GAAGATGCCAGCATTAATTT+TGG | 0.173904 | 6.1:+12950687 | MS.gene019944:CDS |
| TTGGGTGTATCTTCTGAATT+TGG | 0.181231 | 6.1:-12952455 | None:intergenic |
| CTCTCGTCGGAACAACTTTC+AGG | 0.203647 | 6.1:-12951396 | None:intergenic |
| TGGCACTTGAATTAGGCTTC+TGG | 0.217500 | 6.1:-12952520 | None:intergenic |
| TTTCTCTTGGCACTTGAATT+AGG | 0.251600 | 6.1:-12952527 | None:intergenic |
| ATTTCGGATAGCACAGAAAT+TGG | 0.255523 | 6.1:+12951972 | MS.gene019944:CDS |
| AAAACGCTCTGCACTGGAAT+TGG | 0.261720 | 6.1:-12951536 | None:intergenic |
| TGATGGTTCTTCTGAGCTTC+GGG | 0.268992 | 6.1:+12952103 | MS.gene019944:CDS |
| CCAAGACTGACCTGATAAAA+TGG | 0.275644 | 6.1:+12950998 | MS.gene019944:CDS |
| CGCATGTCGTCATCTATAAA+TGG | 0.276143 | 6.1:-12952815 | None:intergenic |
| ACACCCAATGTGAAAATATT+CGG | 0.296339 | 6.1:+12952470 | MS.gene019944:CDS |
| CTCTCTTTCCTCTTGAATAA+TGG | 0.297761 | 6.1:-12951193 | None:intergenic |
| CCAGAGTGCTATAGTTATTT+CGG | 0.297884 | 6.1:+12951956 | MS.gene019944:CDS |
| CTGATGGTTCTTCTGAGCTT+CGG | 0.299024 | 6.1:+12952102 | MS.gene019944:CDS |
| GGCACTTGAATTAGGCTTCT+GGG | 0.305345 | 6.1:-12952519 | None:intergenic |
| GCCTGCATTCTCACCACTTC+CGG | 0.312753 | 6.1:+12952676 | MS.gene019944:CDS |
| TCATCGAAGTTCTTGAATCT+TGG | 0.319044 | 6.1:-12952211 | None:intergenic |
| CAAATGGCATTGCGCTTAAT+CGG | 0.325225 | 6.1:+12951076 | MS.gene019944:CDS |
| TACAGAATTGGTGTCTGATA+TGG | 0.335594 | 6.1:+12952028 | MS.gene019944:CDS |
| GGATTTCAATGCTCCCTATA+CGG | 0.343004 | 6.1:+12952697 | MS.gene019944:CDS |
| GATCGGCAGTGAATCTAAAC+TGG | 0.349783 | 6.1:+12951875 | MS.gene019944:CDS |
| TGAGCTTCGGGGACATGAAT+TGG | 0.357321 | 6.1:+12952115 | MS.gene019944:CDS |
| TGAATAATGGCATGACTGTT+TGG | 0.366219 | 6.1:-12951180 | None:intergenic |
| GCCAAGAGAAATGAAGAAAA+TGG | 0.367721 | 6.1:+12952539 | MS.gene019944:CDS |
| ATGGAGGGGCTATGATAATA+AGG | 0.369012 | 6.1:+12951122 | MS.gene019944:CDS |
| AAACGCTCTGCACTGGAATT+GGG | 0.373672 | 6.1:-12951535 | None:intergenic |
| CTGAATTTGGCAAACACTGC+GGG | 0.378250 | 6.1:-12952442 | None:intergenic |
| GGTTTATGACAATGATTTCC+AGG | 0.380130 | 6.1:+12952601 | MS.gene019944:CDS |
| ATCTGATAAGAAGCTGTATC+AGG | 0.384799 | 6.1:+12951740 | MS.gene019944:CDS |
| TTCTGCTGCTGAGGGTAGAC+TGG | 0.387774 | 6.1:+12952076 | MS.gene019944:CDS |
| GTGTTCCCATCACCCGTATA+GGG | 0.391328 | 6.1:-12952710 | None:intergenic |
| CACCCAATGTGAAAATATTC+GGG | 0.406635 | 6.1:+12952471 | MS.gene019944:CDS |
| TACAGATGTTGTAATTGAAT+TGG | 0.409060 | 6.1:+12952178 | MS.gene019944:CDS |
| CGACGAGAGCTGTGGTGAAA+TGG | 0.409152 | 6.1:+12951410 | MS.gene019944:CDS |
| AGGATACTTCGCGAGCAATA+TGG | 0.409931 | 6.1:-12952768 | None:intergenic |
| GCGAAGTATCCTGCTGCATT+TGG | 0.415607 | 6.1:+12952779 | MS.gene019944:CDS |
| GCTTCTGTAAATGTCATGTT+TGG | 0.416631 | 6.1:-12950659 | None:intergenic |
| TCAGGAAGAATCTAATCCTT+TGG | 0.421416 | 6.1:+12951758 | MS.gene019944:CDS |
| AATCTAATCCTTTGGAAGCT+AGG | 0.427906 | 6.1:+12951766 | MS.gene019944:CDS |
| CCATTGGCTGAACCTGTCTC+TGG | 0.430558 | 6.1:-12951675 | None:intergenic |
| GCAGCAGAATTAGAGCAGTA+TGG | 0.436133 | 6.1:-12952062 | None:intergenic |
| CTGATCCTGTGAAAGGCAAA+AGG | 0.438936 | 6.1:+12951301 | MS.gene019944:CDS |
| AGCTGGAGTTGTCGGATCAC+CGG | 0.445703 | 6.1:+12951605 | MS.gene019944:CDS |
| GGGAGGTGCTGTTACAGAAT+TGG | 0.447224 | 6.1:+12952016 | MS.gene019944:CDS |
| CTCTGGCTATTGAGAAAGAA+AGG | 0.451886 | 6.1:+12950767 | MS.gene019944:CDS |
| CTGTGAAAGGCAAAAGGGTC+AGG | 0.452467 | 6.1:+12951307 | MS.gene019944:CDS |
| GGGATGATGTGGATGGTGGC+AGG | 0.452532 | 6.1:+12951628 | MS.gene019944:CDS |
| CTCTGGTGCTGGACAGTACC+AGG | 0.452680 | 6.1:-12951939 | None:intergenic |
| GACGACATGCGGAGAGCAAA+TGG | 0.453906 | 6.1:+12952827 | MS.gene019944:CDS |
| CAATGCAGCTGCTGATACAT+TGG | 0.454215 | 6.1:+12951218 | MS.gene019944:CDS |
| TGGGCTGGTTGATGATCCTC+TGG | 0.457911 | 6.1:+12950750 | MS.gene019944:CDS |
| CTTAATCGGAAAATGCGTTC+AGG | 0.458740 | 6.1:+12951090 | MS.gene019944:CDS |
| GTTTGGATTCTGAGAGCAGT+TGG | 0.458772 | 6.1:-12950642 | None:intergenic |
| GCTGGAGTTGTCGGATCACC+GGG | 0.462118 | 6.1:+12951606 | MS.gene019944:CDS |
| GCAGCTTCAGTGACGGCAAA+TGG | 0.462149 | 6.1:+12951060 | MS.gene019944:CDS |
| AATTAATGCTGGCATCTTCA+AGG | 0.463472 | 6.1:-12950683 | None:intergenic |
| CAATGTATCAGCAGCTGCAT+TGG | 0.466574 | 6.1:-12951217 | None:intergenic |
| CTCCATGCTCTATCATCCTA+TGG | 0.469177 | 6.1:+12951471 | MS.gene019944:CDS |
| TTCAGGACGTTCCCTATGGA+GGG | 0.470011 | 6.1:+12951107 | MS.gene019944:CDS |
| AGGATCAGCTGAACTAGTTA+TGG | 0.473205 | 6.1:-12951286 | None:intergenic |
| TGTGTTCCCATCACCCGTAT+AGG | 0.473642 | 6.1:-12952711 | None:intergenic |
| ACAGAATTGGTGTCTGATAT+GGG | 0.477056 | 6.1:+12952029 | MS.gene019944:CDS |
| GGTGAAAGAGCTGGAGTTGT+CGG | 0.478577 | 6.1:+12951597 | MS.gene019944:CDS |
| TAACTATAGCACTCTGGTGC+TGG | 0.478994 | 6.1:-12951950 | None:intergenic |
| GATCAATCCGAGGAAATTAA+CGG | 0.480024 | 6.1:+12951807 | MS.gene019944:CDS |
| ATGGAGGAACTCGCTGCCTC+AGG | 0.480085 | 6.1:-12951267 | None:intergenic |
| CTTTCTCTTCTGAAGTCCAA+GGG | 0.481001 | 6.1:-12950801 | None:intergenic |
| GATCTCATGGGTGAAAGAGC+TGG | 0.490424 | 6.1:+12951588 | MS.gene019944:CDS |
| ATTGATCTGACTCGGCTGAC+AGG | 0.496082 | 6.1:-12951791 | None:intergenic |
| ACGCATTGGAATGGATCTCA+TGG | 0.497330 | 6.1:+12951575 | MS.gene019944:CDS |
| GATTTCAATGCTCCCTATAC+GGG | 0.498305 | 6.1:+12952698 | MS.gene019944:CDS |
| GCCAATGGCTCTGATACGTC+AGG | 0.500332 | 6.1:+12951690 | MS.gene019944:CDS |
| AATGCTCCCTATACGGGTGA+TGG | 0.504458 | 6.1:+12952704 | MS.gene019944:CDS |
| CATCTGAGGTTGATTGCATA+TGG | 0.504672 | 6.1:-12951349 | None:intergenic |
| GATAATAAGGCCATGTCAAA+GGG | 0.505947 | 6.1:+12951135 | MS.gene019944:CDS |
| CTGCTCTAATTCTGCTGCTG+AGG | 0.508668 | 6.1:+12952067 | MS.gene019944:CDS |
| TACAGCTTCTTATCAGATGC+AGG | 0.512245 | 6.1:-12951735 | None:intergenic |
| CTTCTCCACATCTGTCCAAT+CGG | 0.513579 | 6.1:-12951439 | None:intergenic |
| TATTATCATAGCCCCTCCAT+AGG | 0.513600 | 6.1:-12951119 | None:intergenic |
| TGAAGTCCAAGGGTTTATCA+TGG | 0.514129 | 6.1:-12950791 | None:intergenic |
| TGCAAGACTCACAAACGCAT+TGG | 0.517176 | 6.1:+12951561 | MS.gene019944:CDS |
| GAATCTAAACTGGGCACTGA+TGG | 0.517510 | 6.1:+12951885 | MS.gene019944:CDS |
| TGCGTTCAGGACGTTCCCTA+TGG | 0.517909 | 6.1:+12951103 | MS.gene019944:CDS |
| GCCTGACGTATCAGAGCCAT+TGG | 0.518358 | 6.1:-12951691 | None:intergenic |
| TTAGGCTTCTGGGTGGATGA+AGG | 0.519936 | 6.1:-12952509 | None:intergenic |
| TCTTTCTCTTCTGAAGTCCA+AGG | 0.521180 | 6.1:-12950802 | None:intergenic |
| TGATAATAAGGCCATGTCAA+AGG | 0.526183 | 6.1:+12951134 | MS.gene019944:CDS |
| GACTCACAAACGCATTGGAA+TGG | 0.528455 | 6.1:+12951566 | MS.gene019944:CDS |
| TTGGACTTCAGAAGAGAAAG+AGG | 0.528606 | 6.1:+12950804 | MS.gene019944:CDS |
| CCCATGGCTAGAACTCATGA+TGG | 0.532113 | 6.1:-12952642 | None:intergenic |
| TCTGACAAACCTGAGAATTG+AGG | 0.532128 | 6.1:-12952317 | None:intergenic |
| GAATACTTCACTATCACCCT+TGG | 0.537857 | 6.1:+12952232 | MS.gene019944:CDS |
| CCATGGCTAGAACTCATGAT+GGG | 0.538507 | 6.1:-12952641 | None:intergenic |
| GAGGGTAGACTGGTTTCTGA+TGG | 0.539296 | 6.1:+12952086 | MS.gene019944:CDS |
| GTATAGGGAGCATTGAAATC+CGG | 0.540575 | 6.1:-12952695 | None:intergenic |
| TCTTGAACAAGATGCTTCCA+AGG | 0.542554 | 6.1:-12952249 | None:intergenic |
| GGGCATTGAAATCAATGCCC+TGG | 0.543279 | 6.1:-12952619 | None:intergenic |
| GCTTCGGGGACATGAATTGG+AGG | 0.543979 | 6.1:+12952118 | MS.gene019944:CDS |
| GCGAGCAATATGGAAGAAGC+AGG | 0.547361 | 6.1:-12952758 | None:intergenic |
| AATGCATGCATTCCAGAGAC+AGG | 0.549741 | 6.1:+12951663 | MS.gene019944:CDS |
| TCCGGAAGTGGTGAGAATGC+AGG | 0.550666 | 6.1:-12952677 | None:intergenic |
| CAGTCATGCCATTATTCAAG+AGG | 0.553730 | 6.1:+12951185 | MS.gene019944:CDS |
| GAAAAGATAAGCCGAGTGAA+GGG | 0.556375 | 6.1:+12951994 | MS.gene019944:CDS |
| CCAGAGACAGGTTCAGCCAA+TGG | 0.558171 | 6.1:+12951675 | MS.gene019944:CDS |
| CAATTCTCAGGTTTGTCAGA+GGG | 0.558911 | 6.1:+12952320 | MS.gene019944:CDS |
| CAGGCTGTACTGTGCTCCCA+TGG | 0.559128 | 6.1:-12952658 | None:intergenic |
| TGATCCTGTGAAAGGCAAAA+GGG | 0.562771 | 6.1:+12951302 | MS.gene019944:CDS |
| CCGAAATAACTATAGCACTC+TGG | 0.563773 | 6.1:-12951956 | None:intergenic |
| AATGGTACCCATGATAATGC+TGG | 0.564415 | 6.1:+12952557 | MS.gene019944:CDS |
| TGCTCTATCATCCTATGGAA+AGG | 0.564466 | 6.1:+12951476 | MS.gene019944:CDS |
| TTCACACTGAATCTTGTGAC+AGG | 0.566129 | 6.1:-12952344 | None:intergenic |
| CAATGCAAAATCCTTTCCAT+AGG | 0.567065 | 6.1:-12951487 | None:intergenic |
| GCTTCTTATCAGATGCAGGC+TGG | 0.568078 | 6.1:-12951731 | None:intergenic |
| TGCTCTAATTCTGCTGCTGA+GGG | 0.568711 | 6.1:+12952068 | MS.gene019944:CDS |
| TGAGTCATGACTGGCATCTG+AGG | 0.569935 | 6.1:-12951363 | None:intergenic |
| TTCCTCGGATTGATCTGACT+CGG | 0.570408 | 6.1:-12951799 | None:intergenic |
| GATACATTGGCTAGTATATG+TGG | 0.571499 | 6.1:+12951231 | MS.gene019944:CDS |
| CTTCTGGGTGGATGAAGGAA+TGG | 0.571648 | 6.1:-12952504 | None:intergenic |
| ATGCTCCCTATACGGGTGAT+GGG | 0.572242 | 6.1:+12952705 | MS.gene019944:CDS |
| CCACCATCCACATCATCCCC+CGG | 0.572908 | 6.1:-12951624 | None:intergenic |
| AAAGGGCCATGATAAACCCT+TGG | 0.575607 | 6.1:+12950785 | MS.gene019944:CDS |
| GGAAAAGATAAGCCGAGTGA+AGG | 0.575823 | 6.1:+12951993 | MS.gene019944:CDS |
| GACAGGTTCCTAGCTTCCAA+AGG | 0.577216 | 6.1:-12951774 | None:intergenic |
| GTTCAGGACGTTCCCTATGG+AGG | 0.577250 | 6.1:+12951106 | MS.gene019944:CDS |
| TCTGGCTATTGAGAAAGAAA+GGG | 0.579078 | 6.1:+12950768 | MS.gene019944:CDS |
| GCATTCAGACCAAATGCAGC+AGG | 0.579481 | 6.1:-12952788 | None:intergenic |
| TCAGGAAGTCGGTGAAAGCG+AGG | 0.581154 | 6.1:+12951325 | MS.gene019944:CDS |
| GGAGCATTGAAATCCGGAAG+TGG | 0.581919 | 6.1:-12952689 | None:intergenic |
| TACAAAATCAGCGAAGCTGA+AGG | 0.582263 | 6.1:+12952580 | MS.gene019944:CDS |
| TTCCATAGGATGATAGAGCA+TGG | 0.587419 | 6.1:-12951473 | None:intergenic |
| ATTATCATAGCCCCTCCATA+GGG | 0.587566 | 6.1:-12951118 | None:intergenic |
| CTTTCTTTCTCAATAGCCAG+AGG | 0.589301 | 6.1:-12950766 | None:intergenic |
| CGATTGGACAGATGTGGAGA+AGG | 0.591263 | 6.1:+12951440 | MS.gene019944:CDS |
| CCATCATGAGTTCTAGCCAT+GGG | 0.592587 | 6.1:+12952642 | MS.gene019944:CDS |
| CGAGTTGATAGAGATGAAGC+TGG | 0.594782 | 6.1:+12952155 | MS.gene019944:CDS |
| GTTTATGACAATGATTTCCA+GGG | 0.595004 | 6.1:+12952602 | MS.gene019944:CDS |
| AGGCAAAAGGGTCAGGAAGT+CGG | 0.596420 | 6.1:+12951314 | MS.gene019944:CDS |
| AGTTCAGCTGATCCTGTGAA+AGG | 0.598452 | 6.1:+12951294 | MS.gene019944:CDS |
| CGCATTGGAATGGATCTCAT+GGG | 0.600221 | 6.1:+12951576 | MS.gene019944:CDS |
| TTTGAGAGCAGCTTCAGTGA+CGG | 0.600958 | 6.1:+12951053 | MS.gene019944:CDS |
| AAATGGTTCAGAAAAGAAAG+AGG | 0.601065 | 6.1:+12952844 | MS.gene019944:CDS |
| GCTTACCGATTGGACAGATG+TGG | 0.603842 | 6.1:+12951434 | MS.gene019944:CDS |
| TCAACACTTTGAGTCATGAC+TGG | 0.606508 | 6.1:-12951372 | None:intergenic |
| TCAATTCTCAGGTTTGTCAG+AGG | 0.610881 | 6.1:+12952319 | MS.gene019944:CDS |
| TCAGGACGTTCCCTATGGAG+GGG | 0.611619 | 6.1:+12951108 | MS.gene019944:CDS |
| CCCATCATGAGTTCTAGCCA+TGG | 0.612513 | 6.1:+12952641 | MS.gene019944:CDS |
| CAATGTGAAAATATTCGGGA+AGG | 0.612907 | 6.1:+12952475 | MS.gene019944:CDS |
| ATCAGCTGAACTAGTTATGG+AGG | 0.613032 | 6.1:-12951283 | None:intergenic |
| CAGGAAGTCGGTGAAAGCGA+GGG | 0.615073 | 6.1:+12951326 | MS.gene019944:CDS |
| GATGGTTCTTCTGAGCTTCG+GGG | 0.618764 | 6.1:+12952104 | MS.gene019944:CDS |
| GCATTGATTGCACAGTGTGT+CGG | 0.623850 | 6.1:+12951504 | MS.gene019944:CDS |
| CAGAATTGGTGTCTGATATG+GGG | 0.626814 | 6.1:+12952030 | MS.gene019944:CDS |
| AAAAGATAAGCCGAGTGAAG+GGG | 0.630313 | 6.1:+12951995 | MS.gene019944:CDS |
| TCTGAACACATCTAACTACT+CGG | 0.630828 | 6.1:-12952869 | None:intergenic |
| TGGAGTTGTCGGATCACCGG+GGG | 0.633048 | 6.1:+12951608 | MS.gene019944:CDS |
| TCTGAATTTGGCAAACACTG+CGG | 0.635761 | 6.1:-12952443 | None:intergenic |
| CATTTCACCACAGCTCTCGT+CGG | 0.635931 | 6.1:-12951409 | None:intergenic |
| AAAGATAAGCCGAGTGAAGG+GGG | 0.635989 | 6.1:+12951996 | MS.gene019944:CDS |
| CATTTATAGATGACGACATG+CGG | 0.637601 | 6.1:+12952816 | MS.gene019944:CDS |
| CATGGCTAGAACTCATGATG+GGG | 0.650282 | 6.1:-12952640 | None:intergenic |
| CTTGAACAAGATGCTTCCAA+GGG | 0.650737 | 6.1:-12952248 | None:intergenic |
| ATCGGCAGTGAATCTAAACT+GGG | 0.658951 | 6.1:+12951876 | MS.gene019944:CDS |
| GTGAAATGGAGCTTACCGAT+TGG | 0.663738 | 6.1:+12951424 | MS.gene019944:CDS |
| ATGGCTAGAACTCATGATGG+GGG | 0.691683 | 6.1:-12952639 | None:intergenic |
| AGCCGAGTCAGATCAATCCG+AGG | 0.697017 | 6.1:+12951797 | MS.gene019944:CDS |
| AGTTGTTCCGACGAGAGCTG+TGG | 0.705834 | 6.1:+12951402 | MS.gene019944:CDS |
| ACATTGGCTAGTATATGTGG+TGG | 0.720828 | 6.1:+12951234 | MS.gene019944:CDS |
| ACTTGAATTAGGCTTCTGGG+TGG | 0.729300 | 6.1:-12952516 | None:intergenic |
| CCTTGATCACAAAACAACAG+CGG | 0.729364 | 6.1:+12950882 | MS.gene019944:CDS |
| GCAGGAAGTGATGAGAAACG+AGG | 0.730233 | 6.1:-12952740 | None:intergenic |
| CTGGAGTTGTCGGATCACCG+GGG | 0.743675 | 6.1:+12951607 | MS.gene019944:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATATTTACTTTTTCGTGAT+CGG | - | chr6.1:12951838-12951857 | None:intergenic | 20.0% |
| !!! | CAATGTTTTTATCTAGTAAT+GGG | + | chr6.1:12950731-12950750 | MS.gene019944:CDS | 20.0% |
| !!! | TCAATGTTTTTATCTAGTAA+TGG | + | chr6.1:12950730-12950749 | MS.gene019944:CDS | 20.0% |
| ! | TACAGATGTTGTAATTGAAT+TGG | + | chr6.1:12952178-12952197 | MS.gene019944:CDS | 25.0% |
| !! | TTAGAGAAATTTGCTTTCTT+TGG | + | chr6.1:12950832-12950851 | MS.gene019944:CDS | 25.0% |
| !! | TTTTGATCCAAAATTAATGC+TGG | - | chr6.1:12950697-12950716 | None:intergenic | 25.0% |
| !!! | TGATTGTTTTGAGAAAATCA+AGG | + | chr6.1:12950939-12950958 | MS.gene019944:CDS | 25.0% |
| AAAAAGACGATAACAAGCTA+GGG | + | chr6.1:12950962-12950981 | MS.gene019944:CDS | 30.0% | |
| AAATGGTTCAGAAAAGAAAG+AGG | + | chr6.1:12952844-12952863 | MS.gene019944:CDS | 30.0% | |
| ACACCCAATGTGAAAATATT+CGG | + | chr6.1:12952470-12952489 | MS.gene019944:CDS | 30.0% | |
| GTTTATGACAATGATTTCCA+GGG | + | chr6.1:12952602-12952621 | MS.gene019944:CDS | 30.0% | |
| ! | ACCATTTTCTTCATTTCTCT+TGG | - | chr6.1:12952543-12952562 | None:intergenic | 30.0% |
| ! | ATTTTGTACCAGCATTATCA+TGG | - | chr6.1:12952568-12952587 | None:intergenic | 30.0% |
| ! | CTTCAGAATTCCATTTTATC+AGG | - | chr6.1:12951011-12951030 | None:intergenic | 30.0% |
| ! | TTCCCGAATATTTTCACATT+GGG | - | chr6.1:12952476-12952495 | None:intergenic | 30.0% |
| ! | TTTTCTAATGCATCTGTGAT+CGG | + | chr6.1:12951858-12951877 | MS.gene019944:CDS | 30.0% |
| ! | TTTTGTACCAGCATTATCAT+GGG | - | chr6.1:12952567-12952586 | None:intergenic | 30.0% |
| AATTAATGCTGGCATCTTCA+AGG | - | chr6.1:12950686-12950705 | None:intergenic | 35.0% | |
| ATCTGATAAGAAGCTGTATC+AGG | + | chr6.1:12951740-12951759 | MS.gene019944:CDS | 35.0% | |
| ATTTCGGATAGCACAGAAAT+TGG | + | chr6.1:12951972-12951991 | MS.gene019944:CDS | 35.0% | |
| CAATGCAAAATCCTTTCCAT+AGG | - | chr6.1:12951490-12951509 | None:intergenic | 35.0% | |
| CAATGTGAAAATATTCGGGA+AGG | + | chr6.1:12952475-12952494 | MS.gene019944:CDS | 35.0% | |
| CACCCAATGTGAAAATATTC+GGG | + | chr6.1:12952471-12952490 | MS.gene019944:CDS | 35.0% | |
| CATTTATAGATGACGACATG+CGG | + | chr6.1:12952816-12952835 | MS.gene019944:CDS | 35.0% | |
| CTCTCTTTCCTCTTGAATAA+TGG | - | chr6.1:12951196-12951215 | None:intergenic | 35.0% | |
| CTTGAAAAACCTCAATTCTC+AGG | + | chr6.1:12952308-12952327 | MS.gene019944:CDS | 35.0% | |
| GAAAAAGACGATAACAAGCT+AGG | + | chr6.1:12950961-12950980 | MS.gene019944:CDS | 35.0% | |
| GATAATAAGGCCATGTCAAA+GGG | + | chr6.1:12951135-12951154 | MS.gene019944:CDS | 35.0% | |
| GATCAATCCGAGGAAATTAA+CGG | + | chr6.1:12951807-12951826 | MS.gene019944:CDS | 35.0% | |
| GCCAAGAGAAATGAAGAAAA+TGG | + | chr6.1:12952539-12952558 | MS.gene019944:CDS | 35.0% | |
| GCTTCTGTAAATGTCATGTT+TGG | - | chr6.1:12950662-12950681 | None:intergenic | 35.0% | |
| GGTTTATGACAATGATTTCC+AGG | + | chr6.1:12952601-12952620 | MS.gene019944:CDS | 35.0% | |
| TCAGGAAGAATCTAATCCTT+TGG | + | chr6.1:12951758-12951777 | MS.gene019944:CDS | 35.0% | |
| TCATCGAAGTTCTTGAATCT+TGG | - | chr6.1:12952214-12952233 | None:intergenic | 35.0% | |
| TCTGGCTATTGAGAAAGAAA+GGG | + | chr6.1:12950768-12950787 | MS.gene019944:CDS | 35.0% | |
| TGAATAATGGCATGACTGTT+TGG | - | chr6.1:12951183-12951202 | None:intergenic | 35.0% | |
| TGATAATAAGGCCATGTCAA+AGG | + | chr6.1:12951134-12951153 | MS.gene019944:CDS | 35.0% | |
| TTGGGTGTATCTTCTGAATT+TGG | - | chr6.1:12952458-12952477 | None:intergenic | 35.0% | |
| TTTCTCTTGGCACTTGAATT+AGG | - | chr6.1:12952530-12952549 | None:intergenic | 35.0% | |
| ! | AATCTAATCCTTTGGAAGCT+AGG | + | chr6.1:12951766-12951785 | MS.gene019944:CDS | 35.0% |
| ! | ACAGAATTGGTGTCTGATAT+GGG | + | chr6.1:12952029-12952048 | MS.gene019944:CDS | 35.0% |
| ! | CCAGAGTGCTATAGTTATTT+CGG | + | chr6.1:12951956-12951975 | MS.gene019944:CDS | 35.0% |
| ! | CTGAGAATTGAGGTTTTTCA+AGG | - | chr6.1:12952310-12952329 | None:intergenic | 35.0% |
| ! | CTTCCCGAATATTTTCACAT+TGG | - | chr6.1:12952477-12952496 | None:intergenic | 35.0% |
| ! | GAAGATGCCAGCATTAATTT+TGG | + | chr6.1:12950687-12950706 | MS.gene019944:CDS | 35.0% |
| ! | GATACATTGGCTAGTATATG+TGG | + | chr6.1:12951231-12951250 | MS.gene019944:CDS | 35.0% |
| ! | TACAGAATTGGTGTCTGATA+TGG | + | chr6.1:12952028-12952047 | MS.gene019944:CDS | 35.0% |
| ! | TCAACCTTTTGTGACAAAAG+CGG | - | chr6.1:12952401-12952420 | None:intergenic | 35.0% |
| !!! | GTTTTTATCTAGTAATGGGC+TGG | + | chr6.1:12950735-12950754 | MS.gene019944:CDS | 35.0% |
| AAAAGATAAGCCGAGTGAAG+GGG | + | chr6.1:12951995-12952014 | MS.gene019944:CDS | 40.0% | |
| AGGATCAGCTGAACTAGTTA+TGG | - | chr6.1:12951289-12951308 | None:intergenic | 40.0% | |
| ATCAGCTGAACTAGTTATGG+AGG | - | chr6.1:12951286-12951305 | None:intergenic | 40.0% | |
| ATCGGCAGTGAATCTAAACT+GGG | + | chr6.1:12951876-12951895 | MS.gene019944:CDS | 40.0% | |
| ATGGAGGGGCTATGATAATA+AGG | + | chr6.1:12951122-12951141 | MS.gene019944:CDS | 40.0% | |
| ATTATCATAGCCCCTCCATA+GGG | - | chr6.1:12951121-12951140 | None:intergenic | 40.0% | |
| CAAATGGCATTGCGCTTAAT+CGG | + | chr6.1:12951076-12951095 | MS.gene019944:CDS | 40.0% | |
| CAATTCTCAGGTTTGTCAGA+GGG | + | chr6.1:12952320-12952339 | MS.gene019944:CDS | 40.0% | |
| CAGTCATGCCATTATTCAAG+AGG | + | chr6.1:12951185-12951204 | MS.gene019944:CDS | 40.0% | |
| CCAAGACTGACCTGATAAAA+TGG | + | chr6.1:12950998-12951017 | MS.gene019944:CDS | 40.0% | |
| CCGAAATAACTATAGCACTC+TGG | - | chr6.1:12951959-12951978 | None:intergenic | 40.0% | |
| CCTTGATCACAAAACAACAG+CGG | + | chr6.1:12950882-12950901 | MS.gene019944:CDS | 40.0% | |
| CGCATGTCGTCATCTATAAA+TGG | - | chr6.1:12952818-12952837 | None:intergenic | 40.0% | |
| CTCTGGCTATTGAGAAAGAA+AGG | + | chr6.1:12950767-12950786 | MS.gene019944:CDS | 40.0% | |
| CTTAATCGGAAAATGCGTTC+AGG | + | chr6.1:12951090-12951109 | MS.gene019944:CDS | 40.0% | |
| CTTGAACAAGATGCTTCCAA+GGG | - | chr6.1:12952251-12952270 | None:intergenic | 40.0% | |
| CTTTCTTTCTCAATAGCCAG+AGG | - | chr6.1:12950769-12950788 | None:intergenic | 40.0% | |
| GAAAAGATAAGCCGAGTGAA+GGG | + | chr6.1:12951994-12952013 | MS.gene019944:CDS | 40.0% | |
| GAATACTTCACTATCACCCT+TGG | + | chr6.1:12952232-12952251 | MS.gene019944:CDS | 40.0% | |
| GATTTCAATGCTCCCTATAC+GGG | + | chr6.1:12952698-12952717 | MS.gene019944:CDS | 40.0% | |
| GGATTTCAATGCTCCCTATA+CGG | + | chr6.1:12952697-12952716 | MS.gene019944:CDS | 40.0% | |
| TACAAAATCAGCGAAGCTGA+AGG | + | chr6.1:12952580-12952599 | MS.gene019944:CDS | 40.0% | |
| TACAGCTTCTTATCAGATGC+AGG | - | chr6.1:12951738-12951757 | None:intergenic | 40.0% | |
| TATTATCATAGCCCCTCCAT+AGG | - | chr6.1:12951122-12951141 | None:intergenic | 40.0% | |
| TCAACACTTTGAGTCATGAC+TGG | - | chr6.1:12951375-12951394 | None:intergenic | 40.0% | |
| TCAATTCTCAGGTTTGTCAG+AGG | + | chr6.1:12952319-12952338 | MS.gene019944:CDS | 40.0% | |
| TCTGAATTTGGCAAACACTG+CGG | - | chr6.1:12952446-12952465 | None:intergenic | 40.0% | |
| TCTGACAAACCTGAGAATTG+AGG | - | chr6.1:12952320-12952339 | None:intergenic | 40.0% | |
| TCTTGAACAAGATGCTTCCA+AGG | - | chr6.1:12952252-12952271 | None:intergenic | 40.0% | |
| TGAAGTCCAAGGGTTTATCA+TGG | - | chr6.1:12950794-12950813 | None:intergenic | 40.0% | |
| TGATCCTGTGAAAGGCAAAA+GGG | + | chr6.1:12951302-12951321 | MS.gene019944:CDS | 40.0% | |
| TGCTCTATCATCCTATGGAA+AGG | + | chr6.1:12951476-12951495 | MS.gene019944:CDS | 40.0% | |
| TTCACACTGAATCTTGTGAC+AGG | - | chr6.1:12952347-12952366 | None:intergenic | 40.0% | |
| TTCCATAGGATGATAGAGCA+TGG | - | chr6.1:12951476-12951495 | None:intergenic | 40.0% | |
| TTGGACTTCAGAAGAGAAAG+AGG | + | chr6.1:12950804-12950823 | MS.gene019944:CDS | 40.0% | |
| ! | AATGGTACCCATGATAATGC+TGG | + | chr6.1:12952557-12952576 | MS.gene019944:CDS | 40.0% |
| ! | ACATTGGCTAGTATATGTGG+TGG | + | chr6.1:12951234-12951253 | MS.gene019944:CDS | 40.0% |
| ! | CAGAATTGGTGTCTGATATG+GGG | + | chr6.1:12952030-12952049 | MS.gene019944:CDS | 40.0% |
| ! | CATCTGAGGTTGATTGCATA+TGG | - | chr6.1:12951352-12951371 | None:intergenic | 40.0% |
| ! | CCATTTTATCAGGTCAGTCT+TGG | - | chr6.1:12951001-12951020 | None:intergenic | 40.0% |
| ! | GATTTTGTCTCCCTTTGACA+TGG | - | chr6.1:12951148-12951167 | None:intergenic | 40.0% |
| ! | GGCTTTTCCGTTAATTTCCT+CGG | - | chr6.1:12951817-12951836 | None:intergenic | 40.0% |
| ! | TGGTGGTTTTCATTTACCTG+AGG | + | chr6.1:12951251-12951270 | MS.gene019944:CDS | 40.0% |
| !! | CTGTCTTGTGCAGTTTTGAT+GGG | + | chr6.1:12951916-12951935 | MS.gene019944:CDS | 40.0% |
| !! | CTTTCTCTTCTGAAGTCCAA+GGG | - | chr6.1:12950804-12950823 | None:intergenic | 40.0% |
| !! | GTATAGGGAGCATTGAAATC+CGG | - | chr6.1:12952698-12952717 | None:intergenic | 40.0% |
| !! | TCTTTCTCTTCTGAAGTCCA+AGG | - | chr6.1:12950805-12950824 | None:intergenic | 40.0% |
| !!! | GGTTTTTCAAGGCATAGTTC+TGG | - | chr6.1:12952299-12952318 | None:intergenic | 40.0% |
| AAAACGCTCTGCACTGGAAT+TGG | - | chr6.1:12951539-12951558 | None:intergenic | 45.0% | |
| AAACGCTCTGCACTGGAATT+GGG | - | chr6.1:12951538-12951557 | None:intergenic | 45.0% | |
| AAAGATAAGCCGAGTGAAGG+GGG | + | chr6.1:12951996-12952015 | MS.gene019944:CDS | 45.0% | |
| AAAGGGCCATGATAAACCCT+TGG | + | chr6.1:12950785-12950804 | MS.gene019944:CDS | 45.0% | |
| AATGCATGCATTCCAGAGAC+AGG | + | chr6.1:12951663-12951682 | MS.gene019944:CDS | 45.0% | |
| ACGCATTGGAATGGATCTCA+TGG | + | chr6.1:12951575-12951594 | MS.gene019944:CDS | 45.0% | |
| ACTTGAATTAGGCTTCTGGG+TGG | - | chr6.1:12952519-12952538 | None:intergenic | 45.0% | |
| AGGATACTTCGCGAGCAATA+TGG | - | chr6.1:12952771-12952790 | None:intergenic | 45.0% | |
| AGTTCAGCTGATCCTGTGAA+AGG | + | chr6.1:12951294-12951313 | MS.gene019944:CDS | 45.0% | |
| ATGGCTAGAACTCATGATGG+GGG | - | chr6.1:12952642-12952661 | None:intergenic | 45.0% | |
| CAATGCAGCTGCTGATACAT+TGG | + | chr6.1:12951218-12951237 | MS.gene019944:CDS | 45.0% | |
| CAATGTATCAGCAGCTGCAT+TGG | - | chr6.1:12951220-12951239 | None:intergenic | 45.0% | |
| CATGGCTAGAACTCATGATG+GGG | - | chr6.1:12952643-12952662 | None:intergenic | 45.0% | |
| CCATGGCTAGAACTCATGAT+GGG | - | chr6.1:12952644-12952663 | None:intergenic | 45.0% | |
| CGCATTGGAATGGATCTCAT+GGG | + | chr6.1:12951576-12951595 | MS.gene019944:CDS | 45.0% | |
| CTCCATGCTCTATCATCCTA+TGG | + | chr6.1:12951471-12951490 | MS.gene019944:CDS | 45.0% | |
| CTGAATTTGGCAAACACTGC+GGG | - | chr6.1:12952445-12952464 | None:intergenic | 45.0% | |
| CTGATCCTGTGAAAGGCAAA+AGG | + | chr6.1:12951301-12951320 | MS.gene019944:CDS | 45.0% | |
| CTGATGGTTCTTCTGAGCTT+CGG | + | chr6.1:12952102-12952121 | MS.gene019944:CDS | 45.0% | |
| CTTCTCCACATCTGTCCAAT+CGG | - | chr6.1:12951442-12951461 | None:intergenic | 45.0% | |
| GACTCACAAACGCATTGGAA+TGG | + | chr6.1:12951566-12951585 | MS.gene019944:CDS | 45.0% | |
| GATCGGCAGTGAATCTAAAC+TGG | + | chr6.1:12951875-12951894 | MS.gene019944:CDS | 45.0% | |
| GCAGCAGAATTAGAGCAGTA+TGG | - | chr6.1:12952065-12952084 | None:intergenic | 45.0% | |
| GGAAAAGATAAGCCGAGTGA+AGG | + | chr6.1:12951993-12952012 | MS.gene019944:CDS | 45.0% | |
| GGCACTTGAATTAGGCTTCT+GGG | - | chr6.1:12952522-12952541 | None:intergenic | 45.0% | |
| GTGAAATGGAGCTTACCGAT+TGG | + | chr6.1:12951424-12951443 | MS.gene019944:CDS | 45.0% | |
| TAACTATAGCACTCTGGTGC+TGG | - | chr6.1:12951953-12951972 | None:intergenic | 45.0% | |
| TGATGGTTCTTCTGAGCTTC+GGG | + | chr6.1:12952103-12952122 | MS.gene019944:CDS | 45.0% | |
| TGCAAAAAAACGCTCTGCAC+TGG | - | chr6.1:12951545-12951564 | None:intergenic | 45.0% | |
| TGCAAGACTCACAAACGCAT+TGG | + | chr6.1:12951561-12951580 | MS.gene019944:CDS | 45.0% | |
| TGCTCTAATTCTGCTGCTGA+GGG | + | chr6.1:12952068-12952087 | MS.gene019944:CDS | 45.0% | |
| TGGCACTTGAATTAGGCTTC+TGG | - | chr6.1:12952523-12952542 | None:intergenic | 45.0% | |
| TTCCTCGGATTGATCTGACT+CGG | - | chr6.1:12951802-12951821 | None:intergenic | 45.0% | |
| TTTGAGAGCAGCTTCAGTGA+CGG | + | chr6.1:12951053-12951072 | MS.gene019944:CDS | 45.0% | |
| ! | CCATCATGAGTTCTAGCCAT+GGG | + | chr6.1:12952642-12952661 | MS.gene019944:CDS | 45.0% |
| ! | GTTTGGATTCTGAGAGCAGT+TGG | - | chr6.1:12950645-12950664 | None:intergenic | 45.0% |
| !! | CGAGTTGATAGAGATGAAGC+TGG | + | chr6.1:12952155-12952174 | MS.gene019944:CDS | 45.0% |
| !! | GAATCTAAACTGGGCACTGA+TGG | + | chr6.1:12951885-12951904 | MS.gene019944:CDS | 45.0% |
| !! | GCATTGATTGCACAGTGTGT+CGG | + | chr6.1:12951504-12951523 | MS.gene019944:CDS | 45.0% |
| !! | GCTGTCTTGTGCAGTTTTGA+TGG | + | chr6.1:12951915-12951934 | MS.gene019944:CDS | 45.0% |
| !!! | CCGCTGTTGTTTTGTGATCA+AGG | - | chr6.1:12950885-12950904 | None:intergenic | 45.0% |
| !!! | GTTGCCGCTTTTGTCACAAA+AGG | + | chr6.1:12952394-12952413 | MS.gene019944:CDS | 45.0% |
| AATGCTCCCTATACGGGTGA+TGG | + | chr6.1:12952704-12952723 | MS.gene019944:CDS | 50.0% | |
| AGGCAAAAGGGTCAGGAAGT+CGG | + | chr6.1:12951314-12951333 | MS.gene019944:CDS | 50.0% | |
| ATGCTCCCTATACGGGTGAT+GGG | + | chr6.1:12952705-12952724 | MS.gene019944:CDS | 50.0% | |
| CATTTCACCACAGCTCTCGT+CGG | - | chr6.1:12951412-12951431 | None:intergenic | 50.0% | |
| CCCATGGCTAGAACTCATGA+TGG | - | chr6.1:12952645-12952664 | None:intergenic | 50.0% | |
| CGATTGGACAGATGTGGAGA+AGG | + | chr6.1:12951440-12951459 | MS.gene019944:CDS | 50.0% | |
| CTCTCGTCGGAACAACTTTC+AGG | - | chr6.1:12951399-12951418 | None:intergenic | 50.0% | |
| CTGCTCTAATTCTGCTGCTG+AGG | + | chr6.1:12952067-12952086 | MS.gene019944:CDS | 50.0% | |
| CTGTGAAAGGCAAAAGGGTC+AGG | + | chr6.1:12951307-12951326 | MS.gene019944:CDS | 50.0% | |
| CTTCTGGGTGGATGAAGGAA+TGG | - | chr6.1:12952507-12952526 | None:intergenic | 50.0% | |
| GACAGGTTCCTAGCTTCCAA+AGG | - | chr6.1:12951777-12951796 | None:intergenic | 50.0% | |
| GATCTCATGGGTGAAAGAGC+TGG | + | chr6.1:12951588-12951607 | MS.gene019944:CDS | 50.0% | |
| GATGGTTCTTCTGAGCTTCG+GGG | + | chr6.1:12952104-12952123 | MS.gene019944:CDS | 50.0% | |
| GCAGGAAGTGATGAGAAACG+AGG | - | chr6.1:12952743-12952762 | None:intergenic | 50.0% | |
| GCATTCAGACCAAATGCAGC+AGG | - | chr6.1:12952791-12952810 | None:intergenic | 50.0% | |
| GCGAGCAATATGGAAGAAGC+AGG | - | chr6.1:12952761-12952780 | None:intergenic | 50.0% | |
| GCTTCTTATCAGATGCAGGC+TGG | - | chr6.1:12951734-12951753 | None:intergenic | 50.0% | |
| GGTGAAAGAGCTGGAGTTGT+CGG | + | chr6.1:12951597-12951616 | MS.gene019944:CDS | 50.0% | |
| GTGTTCCCATCACCCGTATA+GGG | - | chr6.1:12952713-12952732 | None:intergenic | 50.0% | |
| TGAGCTTCGGGGACATGAAT+TGG | + | chr6.1:12952115-12952134 | MS.gene019944:CDS | 50.0% | |
| TGAGTCATGACTGGCATCTG+AGG | - | chr6.1:12951366-12951385 | None:intergenic | 50.0% | |
| TGTGTTCCCATCACCCGTAT+AGG | - | chr6.1:12952714-12952733 | None:intergenic | 50.0% | |
| TTAGGCTTCTGGGTGGATGA+AGG | - | chr6.1:12952512-12952531 | None:intergenic | 50.0% | |
| TTCAGGACGTTCCCTATGGA+GGG | + | chr6.1:12951107-12951126 | MS.gene019944:CDS | 50.0% | |
| ! | CCCATCATGAGTTCTAGCCA+TGG | + | chr6.1:12952641-12952660 | MS.gene019944:CDS | 50.0% |
| ! | CTGACCCTTTTGCCTTTCAC+AGG | - | chr6.1:12951309-12951328 | None:intergenic | 50.0% |
| ! | GCGAAGTATCCTGCTGCATT+TGG | + | chr6.1:12952779-12952798 | MS.gene019944:CDS | 50.0% |
| ! | GCTTACCGATTGGACAGATG+TGG | + | chr6.1:12951434-12951453 | MS.gene019944:CDS | 50.0% |
| !! | ATTGATCTGACTCGGCTGAC+AGG | - | chr6.1:12951794-12951813 | None:intergenic | 50.0% |
| !! | GAGGGTAGACTGGTTTCTGA+TGG | + | chr6.1:12952086-12952105 | MS.gene019944:CDS | 50.0% |
| !! | GGAGCATTGAAATCCGGAAG+TGG | - | chr6.1:12952692-12952711 | None:intergenic | 50.0% |
| !! | GGGAGGTGCTGTTACAGAAT+TGG | + | chr6.1:12952016-12952035 | MS.gene019944:CDS | 50.0% |
| !! | GGGCATTGAAATCAATGCCC+TGG | - | chr6.1:12952622-12952641 | None:intergenic | 50.0% |
| !! | TTGTGCAGTTTTGATGGGCC+TGG | + | chr6.1:12951921-12951940 | MS.gene019944:CDS | 50.0% |
| AGCCGAGTCAGATCAATCCG+AGG | + | chr6.1:12951797-12951816 | MS.gene019944:CDS | 55.0% | |
| AGCTGGAGTTGTCGGATCAC+CGG | + | chr6.1:12951605-12951624 | MS.gene019944:CDS | 55.0% | |
| AGTTGTTCCGACGAGAGCTG+TGG | + | chr6.1:12951402-12951421 | MS.gene019944:CDS | 55.0% | |
| CAGGAAGTCGGTGAAAGCGA+GGG | + | chr6.1:12951326-12951345 | MS.gene019944:CDS | 55.0% | |
| CCAGAGACAGGTTCAGCCAA+TGG | + | chr6.1:12951675-12951694 | MS.gene019944:CDS | 55.0% | |
| CGACGAGAGCTGTGGTGAAA+TGG | + | chr6.1:12951410-12951429 | MS.gene019944:CDS | 55.0% | |
| GACGACATGCGGAGAGCAAA+TGG | + | chr6.1:12952827-12952846 | MS.gene019944:CDS | 55.0% | |
| GCAGCTTCAGTGACGGCAAA+TGG | + | chr6.1:12951060-12951079 | MS.gene019944:CDS | 55.0% | |
| GCCTGACGTATCAGAGCCAT+TGG | - | chr6.1:12951694-12951713 | None:intergenic | 55.0% | |
| GCCTGCATTCTCACCACTTC+CGG | + | chr6.1:12952676-12952695 | MS.gene019944:CDS | 55.0% | |
| GCTTCGGGGACATGAATTGG+AGG | + | chr6.1:12952118-12952137 | MS.gene019944:CDS | 55.0% | |
| GTTCAGGACGTTCCCTATGG+AGG | + | chr6.1:12951106-12951125 | MS.gene019944:CDS | 55.0% | |
| TCAGGAAGTCGGTGAAAGCG+AGG | + | chr6.1:12951325-12951344 | MS.gene019944:CDS | 55.0% | |
| TCAGGACGTTCCCTATGGAG+GGG | + | chr6.1:12951108-12951127 | MS.gene019944:CDS | 55.0% | |
| TCCGGAAGTGGTGAGAATGC+AGG | - | chr6.1:12952680-12952699 | None:intergenic | 55.0% | |
| TGCGTTCAGGACGTTCCCTA+TGG | + | chr6.1:12951103-12951122 | MS.gene019944:CDS | 55.0% | |
| TTCTGCTGCTGAGGGTAGAC+TGG | + | chr6.1:12952076-12952095 | MS.gene019944:CDS | 55.0% | |
| ! | CCATTGGCTGAACCTGTCTC+TGG | - | chr6.1:12951678-12951697 | None:intergenic | 55.0% |
| !! | GCCAATGGCTCTGATACGTC+AGG | + | chr6.1:12951690-12951709 | MS.gene019944:CDS | 55.0% |
| !! | TGGGCTGGTTGATGATCCTC+TGG | + | chr6.1:12950750-12950769 | MS.gene019944:CDS | 55.0% |
| ACAGCACCTCCCCCTTCACT+CGG | - | chr6.1:12952008-12952027 | None:intergenic | 60.0% | |
| ATGGAGGAACTCGCTGCCTC+AGG | - | chr6.1:12951270-12951289 | None:intergenic | 60.0% | |
| CAGGCTGTACTGTGCTCCCA+TGG | - | chr6.1:12952661-12952680 | None:intergenic | 60.0% | |
| CCACCATCCACATCATCCCC+CGG | - | chr6.1:12951627-12951646 | None:intergenic | 60.0% | |
| CTGGAGTTGTCGGATCACCG+GGG | + | chr6.1:12951607-12951626 | MS.gene019944:CDS | 60.0% | |
| GATAAGCCGAGTGAAGGGGG+AGG | + | chr6.1:12951999-12952018 | MS.gene019944:CDS | 60.0% | |
| GCTGGAGTTGTCGGATCACC+GGG | + | chr6.1:12951606-12951625 | MS.gene019944:CDS | 60.0% | |
| TCACCGGGGGATGATGTGGA+TGG | + | chr6.1:12951621-12951640 | MS.gene019944:CDS | 60.0% | |
| TGGAGTTGTCGGATCACCGG+GGG | + | chr6.1:12951608-12951627 | MS.gene019944:CDS | 60.0% | |
| ! | CTCTGGTGCTGGACAGTACC+AGG | - | chr6.1:12951942-12951961 | None:intergenic | 60.0% |
| ! | GGGATGATGTGGATGGTGGC+AGG | + | chr6.1:12951628-12951647 | MS.gene019944:CDS | 60.0% |
| CCGGGGGATGATGTGGATGG+TGG | + | chr6.1:12951624-12951643 | MS.gene019944:CDS | 65.0% | |
| CGGATCACCGGGGGATGATG+TGG | + | chr6.1:12951617-12951636 | MS.gene019944:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 12950625 | 12952880 | 12950625 | ID=MS.gene019944 |
| chr6.1 | mRNA | 12950625 | 12952880 | 12950625 | ID=MS.gene019944.t1;Parent=MS.gene019944 |
| chr6.1 | exon | 12950625 | 12952880 | 12950625 | ID=MS.gene019944.t1.exon1;Parent=MS.gene019944.t1 |
| chr6.1 | CDS | 12950625 | 12952880 | 12950625 | ID=cds.MS.gene019944.t1;Parent=MS.gene019944.t1 |
| Gene Sequence |
| Protein sequence |
