AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene02035

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene02035.t1 MTR_2g028950 97.623 589 12 1 1 587 1 589 0.0 1176
MS.gene02035.t1 MTR_2g028950 97.610 502 10 1 1 500 1 502 0.0 1004
MS.gene02035.t1 MTR_5g090770 59.025 554 215 4 21 567 23 571 0.0 666
MS.gene02035.t1 MTR_5g090770 59.857 421 160 3 21 434 23 441 2.27e-176 507
MS.gene02035.t1 MTR_2g039880 43.937 569 281 12 9 564 15 558 6.62e-141 421
MS.gene02035.t1 MTR_7g090020 34.286 385 224 10 42 401 6 386 2.84e-46 170
MS.gene02035.t1 MTR_1g051025 32.552 384 231 9 42 401 6 385 3.99e-44 164
MS.gene02035.t1 MTR_3g102610 50.847 118 22 3 187 302 40 123 9.07e-22 91.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene02035.t1 AT5G45110 61.863 569 196 7 1 559 1 558 0.0 675
MS.gene02035.t1 AT4G19660 60.441 589 198 11 2 578 3 568 0.0 644
MS.gene02035.t1 AT4G19660 57.792 616 198 12 2 578 3 595 0.0 630
MS.gene02035.t1 AT5G45110 60.571 525 187 7 1 519 1 511 0.0 604
MS.gene02035.t1 AT1G64280 40.414 532 299 7 39 562 42 563 1.85e-125 382
MS.gene02035.t1 AT4G26120 40.516 543 301 10 39 573 45 573 4.30e-123 376
MS.gene02035.t1 AT4G26120 40.516 543 301 10 39 573 44 572 6.35e-123 375
MS.gene02035.t1 AT3G57130 33.596 381 228 8 42 401 8 384 4.96e-50 180
MS.gene02035.t1 AT2G41370 33.503 394 228 10 37 401 3 391 1.00e-46 171
MS.gene02035.t1 AT3G57130 30.769 156 98 3 42 188 8 162 1.86e-16 78.2

Find 135 sgRNAs with CRISPR-Local

Find 306 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTGACTCTTTGCTCTTCT+TGG 0.133695 2.2:-58864067 None:intergenic
TGCAATGTCCATGGCTAATT+TGG 0.171363 2.2:-58863546 None:intergenic
GAACAAGCTGAGTTCTAATT+TGG 0.195265 2.2:+58860170 MS.gene02035:CDS
ATTGATTCTGATTATGATTA+TGG 0.207555 2.2:+58860204 MS.gene02035:CDS
AAAACAAGAGACTTATTTCT+AGG 0.255152 2.2:+58863666 MS.gene02035:CDS
TACCCCTCTTAAATATTTCA+TGG 0.278681 2.2:-58860302 None:intergenic
AAGGTTGTTTCTGAAGTTCT+TGG 0.286176 2.2:+58861748 MS.gene02035:CDS
ATCCGAGTTTGCTGGTCTTT+CGG 0.306284 2.2:+58863583 MS.gene02035:CDS
TGTAATATACAGGCTCTCTA+AGG 0.310203 2.2:-58864193 None:intergenic
CTTGACTCTTTGCTCTTCTT+GGG 0.320433 2.2:-58864066 None:intergenic
TCGAGCACTTCCGAGCAATT+AGG 0.321539 2.2:-58863993 None:intergenic
TCTCAAAATAATGGCTAATT+CGG 0.322919 2.2:+58860032 None:intergenic
TTTAAGAGGGGTAAAGATAA+AGG 0.330980 2.2:+58860312 MS.gene02035:CDS
TGAAGTTCTTGGATTGGGTT+TGG 0.339158 2.2:+58861759 MS.gene02035:CDS
TTTCTAGCCTTGTAATATAC+AGG 0.346826 2.2:-58864203 None:intergenic
AGACGTCTTCTTAACTTTGT+AGG 0.350294 2.2:+58861367 MS.gene02035:CDS
GTTTCTGAAGTTCTTGGATT+GGG 0.355904 2.2:+58861754 MS.gene02035:CDS
AAAATTCATCGGTGCATTCT+AGG 0.360553 2.2:+58860261 MS.gene02035:CDS
CGAGCATGATCGGAGCCATT+AGG 0.362185 2.2:-58860126 None:intergenic
AGGGCATATGTTGTGACTAA+TGG 0.365492 2.2:-58860106 None:intergenic
ATCGGTGCATTCTAGGTTCT+AGG 0.371950 2.2:+58860268 MS.gene02035:CDS
TATCATTGTGGAGGGAATTC+CGG 0.388694 2.2:+58860236 MS.gene02035:CDS
AAAGCTGAGTTTAGTCGCTC+TGG 0.402143 2.2:+58864143 MS.gene02035:CDS
TGTTTCTGAAGTTCTTGGAT+TGG 0.410365 2.2:+58861753 MS.gene02035:CDS
AATTCCCTCCACAATGATAT+CGG 0.420705 2.2:-58860232 None:intergenic
TCCACAGCAAAATTAATTGC+AGG 0.431240 2.2:-58860513 None:intergenic
TTCTCAAGGTAAAACAAATC+AGG 0.437786 2.2:-58864038 None:intergenic
TTGAGCGATTTGTTGCCTTA+TGG 0.438180 2.2:+58860369 MS.gene02035:CDS
AGTCACAACATATGCCCTAA+TGG 0.443721 2.2:+58860111 MS.gene02035:CDS
GCTCCGCCGCGACCTTCATC+AGG 0.443936 2.2:+58861552 MS.gene02035:CDS
ATGGAGGCCCTGATGAAAAC+AGG 0.445853 2.2:+58863689 MS.gene02035:CDS
GCTCTTTCTCAATTGAGATC+TGG 0.446362 2.2:-58861498 None:intergenic
GGAAGTGCTCGACAAGTTCA+TGG 0.446634 2.2:+58864004 MS.gene02035:CDS
TAGTATCGCTTCTTACGAAA+GGG 0.448428 2.2:+58861857 MS.gene02035:CDS
TCATCTTCGCACTTGTCAAA+TGG 0.450698 2.2:+58860081 MS.gene02035:CDS
GTGGTGGGTGTCAGTCGAGA+TGG 0.451143 2.2:+58863956 MS.gene02035:intron
AGAGTGCTGTTAGTATTTGT+AGG 0.451754 2.2:+58861911 MS.gene02035:CDS
GACGTCTTCTTAACTTTGTA+GGG 0.452305 2.2:+58861368 MS.gene02035:CDS
GAGACAACATCCGAGTTTGC+TGG 0.452844 2.2:+58863575 MS.gene02035:CDS
AGAACTTCAGAAACAACCTT+AGG 0.452990 2.2:-58861745 None:intergenic
TCATAACCAACTTTGCCATA+AGG 0.458550 2.2:-58860384 None:intergenic
GCTGGTCTTTCGGCATCAAA+AGG 0.459478 2.2:+58863593 MS.gene02035:CDS
AGAAGCGATACTATAATTGA+AGG 0.460936 2.2:-58861847 None:intergenic
CTCGAGGTTACGAGCATGAT+CGG 0.461902 2.2:-58860136 None:intergenic
GAGCATGATCGGAGCCATTA+GGG 0.467051 2.2:-58860125 None:intergenic
TGGTGGGTGTCAGTCGAGAT+GGG 0.469353 2.2:+58863957 MS.gene02035:intron
GTTTGGCTAATGTCAATCTT+CGG 0.472297 2.2:+58861776 MS.gene02035:CDS
AAAGGATTGTCGAAGAATGA+AGG 0.474320 2.2:+58860330 MS.gene02035:CDS
CTTTGTAGGGAAGGCTCTTG+TGG 0.482823 2.2:+58861381 MS.gene02035:CDS
TGCCACTCTGTCAACACATT+GGG 0.488312 2.2:-58861461 None:intergenic
CAAGAGACTTATTTCTAGGA+TGG 0.490241 2.2:+58863670 MS.gene02035:CDS
CTTCTTGGGTGCCCTTCTCA+AGG 0.494673 2.2:-58864052 None:intergenic
AGGTTCAAACGGAAACTTAA+GGG 0.497387 2.2:+58863613 MS.gene02035:CDS
TTTCCATGAAATATTTAAGA+GGG 0.500978 2.2:+58860299 MS.gene02035:CDS
TTGTTGCCTTATGGCAAAGT+TGG 0.501023 2.2:+58860378 MS.gene02035:CDS
AAGGTTCAAACGGAAACTTA+AGG 0.501661 2.2:+58863612 MS.gene02035:CDS
AGGGACAAAGTGTCCACTAC+AGG 0.502128 2.2:-58861592 None:intergenic
AGAAATGCGAAGGAATCCTT+TGG 0.503336 2.2:+58862023 MS.gene02035:CDS
TTCTTGAGCTATGCATATAG+TGG 0.505104 2.2:+58860420 MS.gene02035:CDS
TACGAAAGGGGCTTGTGCAT+CGG 0.506556 2.2:+58861870 MS.gene02035:CDS
CAAGAACATCAATGCATATC+CGG 0.508900 2.2:-58861996 None:intergenic
TCGGCATCAAAAGGTTCAAA+CGG 0.510189 2.2:+58863602 MS.gene02035:CDS
GCATCGGATTTGACTTTCGA+TGG 0.514017 2.2:+58861886 MS.gene02035:CDS
ATAGTATCGCTTCTTACGAA+AGG 0.524638 2.2:+58861856 MS.gene02035:CDS
AAGCTGAGTTTAGTCGCTCT+GGG 0.526051 2.2:+58864144 MS.gene02035:CDS
TGCCGAAAGACCAGCAAACT+CGG 0.526961 2.2:-58863585 None:intergenic
CACTAGAATTCACAAGGCAT+TGG 0.529760 2.2:+58861624 MS.gene02035:CDS
ATGGCTAATTTGGCTTCCAA+AGG 0.534107 2.2:-58863536 None:intergenic
GCGCTACTTTCCTAATTGCT+CGG 0.534492 2.2:+58863983 MS.gene02035:CDS
CTCTGCACGTGCAATGTCCA+TGG 0.539317 2.2:-58863555 None:intergenic
TGGCTAATTTGGCTTCCAAA+GGG 0.539806 2.2:-58863535 None:intergenic
TCACATTGCTGCCATGCGTA+AGG 0.540227 2.2:+58861822 MS.gene02035:CDS
CACAGTGGGCTACTGCATAG+TGG 0.545838 2.2:-58861720 None:intergenic
TCTTCTTAACTTTGTAGGGA+AGG 0.546009 2.2:+58861372 MS.gene02035:CDS
CATCATCCTGATGAAGGTCG+CGG 0.548121 2.2:-58861558 None:intergenic
ACACATGTAGACACCTCCAT+TGG 0.548193 2.2:-58860459 None:intergenic
AGTAGCCCACTGTGACCCTA+AGG 0.552063 2.2:+58861729 MS.gene02035:CDS
AGATGTCATTTCAATCCTCA+TGG 0.554111 2.2:+58861405 MS.gene02035:CDS
GGAAAGAAACAAATAAAGAC+CGG 0.554242 2.2:+58861977 MS.gene02035:CDS
GAACTTCAGAAACAACCTTA+GGG 0.555444 2.2:-58861744 None:intergenic
GTCAATCTTCGGAATTCTCG+AGG 0.563292 2.2:+58861787 MS.gene02035:CDS
GATGTATTATTGCTCAAAGA+GGG 0.566332 2.2:-58860060 None:intergenic
GTGCCACTCTGTCAACACAT+TGG 0.567094 2.2:-58861462 None:intergenic
GGGTGTCAGTCGAGATGGGG+CGG 0.570433 2.2:+58863961 MS.gene02035:intron
TCACCATACCTCTGTTCTCA+AGG 0.571825 2.2:-58862107 None:intergenic
TAGAGAGCCTGTATATTACA+AGG 0.574111 2.2:+58864196 MS.gene02035:CDS
AAGGATTGTCGAAGAATGAA+GGG 0.575680 2.2:+58860331 MS.gene02035:CDS
TGTTGACAGAGTGGCACGAT+CGG 0.578105 2.2:+58861468 MS.gene02035:CDS
GTGCTGTTAGTATTTGTAGG+AGG 0.578982 2.2:+58861914 MS.gene02035:CDS
TTTGGAAGCCAAATTAGCCA+TGG 0.582434 2.2:+58863538 MS.gene02035:CDS
CGAGTTGATTCAGTTGACAA+TGG 0.584484 2.2:-58861435 None:intergenic
TAGGAGGTTGACGAGGCCAA+AGG 0.585498 2.2:+58861930 MS.gene02035:CDS
TTCCATGAAATATTTAAGAG+GGG 0.588302 2.2:+58860300 MS.gene02035:CDS
AAGAAGAGCAAAGAGTCAAG+AGG 0.588632 2.2:+58864069 MS.gene02035:CDS
GTAATATACAGGCTCTCTAA+GGG 0.591902 2.2:-58864192 None:intergenic
TAAACTTAAACCCTCTCCAA+TGG 0.595072 2.2:+58860443 MS.gene02035:CDS
TGATGTATTATTGCTCAAAG+AGG 0.595361 2.2:-58860061 None:intergenic
GGTGGGTGTCAGTCGAGATG+GGG 0.597335 2.2:+58863958 MS.gene02035:intron
AGGCTCTCTAAGGGATGAAG+AGG 0.600248 2.2:-58864183 None:intergenic
GAGACTTATTTCTAGGATGG+AGG 0.602102 2.2:+58863673 MS.gene02035:CDS
AGTATCGCTTCTTACGAAAG+GGG 0.605200 2.2:+58861858 MS.gene02035:CDS
TGGAAAAGTGATACCAACTC+TGG 0.609116 2.2:-58860567 None:intergenic
GTTTGTGCTCATGATGCTTG+CGG 0.612341 2.2:+58860489 MS.gene02035:CDS
TTCTTGAAAGAGAAATGCGA+AGG 0.612843 2.2:+58862013 MS.gene02035:CDS
GAATTCCGGTGAAAATTCAT+CGG 0.614156 2.2:+58860250 MS.gene02035:CDS
TCTCAATTGAGATCTGGTCA+AGG 0.616130 2.2:-58861492 None:intergenic
CAAGGTACAAAAGCTTCATG+TGG 0.618221 2.2:-58862089 None:intergenic
CTCTGTGTCTTCCCACACAG+TGG 0.626716 2.2:+58862056 MS.gene02035:CDS
CAAGGTAAAACAAATCAGGT+AGG 0.633426 2.2:-58864034 None:intergenic
AATTGAAGGCTCCTTACGCA+TGG 0.634465 2.2:-58861833 None:intergenic
GTAGACACCTCCATTGGAGA+GGG 0.634552 2.2:-58860453 None:intergenic
TGAAAACGATGCTCCTGTAG+TGG 0.635923 2.2:+58861579 MS.gene02035:CDS
ACTTAAACCCTCTCCAATGG+AGG 0.636356 2.2:+58860446 MS.gene02035:CDS
TGTTCAAACTTATAACCTCG+AGG 0.641337 2.2:-58860152 None:intergenic
ACAGAGGGATCTGTAGCCAA+AGG 0.651194 2.2:-58862039 None:intergenic
AACAACCTTAGGGTCACAGT+GGG 0.652928 2.2:-58861734 None:intergenic
TCAATCTTCGGAATTCTCGA+GGG 0.655049 2.2:+58861788 MS.gene02035:CDS
GCTTAAAGATGATGTCAACA+AGG 0.657265 2.2:+58864106 MS.gene02035:CDS
ACGAATCACTAGAATTCACA+AGG 0.672729 2.2:+58861618 MS.gene02035:CDS
CACTGTGTGGGAAGACACAG+AGG 0.675475 2.2:-58862055 None:intergenic
TGTAGACACCTCCATTGGAG+AGG 0.677893 2.2:-58860454 None:intergenic
TGCCCAATGTGTTGACAGAG+TGG 0.682710 2.2:+58861459 MS.gene02035:CDS
TTCAAACGGAAACTTAAGGG+AGG 0.682937 2.2:+58863616 MS.gene02035:CDS
GTATTTGTAGGAGGTTGACG+AGG 0.688711 2.2:+58861923 MS.gene02035:CDS
TGATGCCGATATCATTGTGG+AGG 0.689812 2.2:+58860227 MS.gene02035:CDS
GAGATCATCAGCCACTGTGT+GGG 0.692384 2.2:-58862067 None:intergenic
CGATCATGCTCGTAACCTCG+AGG 0.695662 2.2:+58860137 MS.gene02035:CDS
GACAATGGAAAGCAACCATG+AGG 0.699033 2.2:-58861420 None:intergenic
GGAGATCATCAGCCACTGTG+TGG 0.705139 2.2:-58862068 None:intergenic
TGGTGATGCCGATATCATTG+TGG 0.710168 2.2:+58860224 MS.gene02035:CDS
GATGCCGATATCATTGTGGA+GGG 0.714650 2.2:+58860228 MS.gene02035:CDS
AAACAACCTTAGGGTCACAG+TGG 0.718165 2.2:-58861735 None:intergenic
ACTGTGTGGGAAGACACAGA+GGG 0.734076 2.2:-58862054 None:intergenic
CATCCTGATGAAGGTCGCGG+CGG 0.747920 2.2:-58861555 None:intergenic
AGTGCTCGACAAGTTCATGG+AGG 0.770013 2.2:+58864007 MS.gene02035:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAAAAAAAAAAAAAAAAA+AGG - chr2.2:58863330-58863349 None:intergenic 0.0%
!!! CTTTTATTTTTGAAGTATTT+GGG + chr2.2:58860867-58860886 MS.gene02035:intron 15.0%
!!! TATTATTATCAGATACTTTT+TGG + chr2.2:58860787-58860806 MS.gene02035:intron 15.0%
!!! TCTTTTATTTTTGAAGTATT+TGG + chr2.2:58860866-58860885 MS.gene02035:intron 15.0%
!!! TTTTAAACAATATTTTCCTA+AGG - chr2.2:58862858-58862877 None:intergenic 15.0%
!!! TTTTTTAAATTTTCTGTTTC+AGG + chr2.2:58863342-58863361 MS.gene02035:intron 15.0%
!! AAACAAAAAAACTCCAAAAT+GGG - chr2.2:58862317-58862336 None:intergenic 20.0%
!! AAGAACCACTTAAAATTTAT+GGG + chr2.2:58862355-58862374 MS.gene02035:intron 20.0%
!! AGTTCAAAATTACATAAAGT+TGG - chr2.2:58862479-58862498 None:intergenic 20.0%
!! ATAATATAGAGAAAACAGAA+AGG - chr2.2:58860939-58860958 None:intergenic 20.0%
!! ATATAGAAAAATGTTCAAGT+GGG - chr2.2:58860914-58860933 None:intergenic 20.0%
!! GGAATAATTAATTATCTGTT+AGG + chr2.2:58860978-58860997 MS.gene02035:intron 20.0%
!! TATTTAATAGTATCCTCTTA+TGG + chr2.2:58863729-58863748 MS.gene02035:intron 20.0%
!! TTTCCATGAAATATTTAAGA+GGG + chr2.2:58860299-58860318 MS.gene02035:CDS 20.0%
!!! ATGAAATTTAGTTCAAGTTT+AGG + chr2.2:58860957-58860976 MS.gene02035:intron 20.0%
!!! ATTGATTCTGATTATGATTA+TGG + chr2.2:58860204-58860223 MS.gene02035:CDS 20.0%
!!! GTATAGTAAGAAATTTGTTT+TGG - chr2.2:58861116-58861135 None:intergenic 20.0%
!!! TAAGAAATTTGTTTTGGAAA+AGG - chr2.2:58861110-58861129 None:intergenic 20.0%
!!! TTACTTTTGTTGATTTTGAA+GGG + chr2.2:58861164-58861183 MS.gene02035:intron 20.0%
!!! TTTACTTTTGTTGATTTTGA+AGG + chr2.2:58861163-58861182 MS.gene02035:intron 20.0%
!!! TTTTCCATGAAATATTTAAG+AGG + chr2.2:58860298-58860317 MS.gene02035:CDS 20.0%
! AATCATCATACAAAACATCT+TGG - chr2.2:58861022-58861041 None:intergenic 25.0%
! ATTTAGCTACAAATGAAACA+AGG - chr2.2:58863166-58863185 None:intergenic 25.0%
! CAAACAAAAAAACTCCAAAA+TGG - chr2.2:58862318-58862337 None:intergenic 25.0%
! CATATAGAAAAATGTTCAAG+TGG - chr2.2:58860915-58860934 None:intergenic 25.0%
! GAAGAACCACTTAAAATTTA+TGG + chr2.2:58862354-58862373 MS.gene02035:intron 25.0%
! TAGAATTGTACATAGAAACA+TGG - chr2.2:58863910-58863929 None:intergenic 25.0%
! TATAGAAAAATGTTCAAGTG+GGG - chr2.2:58860913-58860932 None:intergenic 25.0%
! TCATAGATATAATGTTTACC+TGG - chr2.2:58860590-58860609 None:intergenic 25.0%
! TTCCATGAAATATTTAAGAG+GGG + chr2.2:58860300-58860319 MS.gene02035:CDS 25.0%
!! AAAACAAAATGACTCAGTTT+TGG - chr2.2:58862233-58862252 None:intergenic 25.0%
!! AAAACAAGAGACTTATTTCT+AGG + chr2.2:58863666-58863685 MS.gene02035:CDS 25.0%
!! AAACAAAATGACTCAGTTTT+GGG - chr2.2:58862232-58862251 None:intergenic 25.0%
!! AAGATGTATTTGAGAAGTAT+TGG + chr2.2:58860735-58860754 MS.gene02035:intron 25.0%
!! AATTCTAGTGATTCGTTTTA+GGG - chr2.2:58861614-58861633 None:intergenic 25.0%
!! TTTTGAATGTTATGTTCAAC+TGG + chr2.2:58863421-58863440 MS.gene02035:intron 25.0%
AAATCAATCAGAGAATCAGA+TGG - chr2.2:58863848-58863867 None:intergenic 30.0%
AATATAGCTTAGAGCATGAA+AGG + chr2.2:58862919-58862938 MS.gene02035:intron 30.0%
AGAAGCGATACTATAATTGA+AGG - chr2.2:58861850-58861869 None:intergenic 30.0%
AGTCATATTGTATCTGATCA+AGG + chr2.2:58861304-58861323 MS.gene02035:intron 30.0%
ATAGAAAAATGTTCAAGTGG+GGG - chr2.2:58860912-58860931 None:intergenic 30.0%
ATATAGCTTAGAGCATGAAA+GGG + chr2.2:58862920-58862939 MS.gene02035:intron 30.0%
ATTCACAAGTTACTGCATTA+GGG + chr2.2:58862552-58862571 MS.gene02035:intron 30.0%
ATTGTATCTGATCAAGGTTA+AGG + chr2.2:58861310-58861329 MS.gene02035:intron 30.0%
CAACTCTGGTATTTGAAAAA+TGG - chr2.2:58860556-58860575 None:intergenic 30.0%
CAATCTTACCTTGCAATTAA+AGG - chr2.2:58862727-58862746 None:intergenic 30.0%
CAGCAATGCTTATTATTTGA+TGG - chr2.2:58863483-58863502 None:intergenic 30.0%
CATAATTGGCATCTTATGTT+GGG + chr2.2:58861239-58861258 MS.gene02035:intron 30.0%
CCATATATCTTGCTTTCTTT+AGG + chr2.2:58861216-58861235 MS.gene02035:intron 30.0%
CCTAAAGAAAGCAAGATATA+TGG - chr2.2:58861219-58861238 None:intergenic 30.0%
CTAAAGTTTCATCTAGCAAA+AGG + chr2.2:58862584-58862603 MS.gene02035:intron 30.0%
GATGTATTATTGCTCAAAGA+GGG - chr2.2:58860063-58860082 None:intergenic 30.0%
GGAAAGAAACAAATAAAGAC+CGG + chr2.2:58861977-58861996 MS.gene02035:CDS 30.0%
TAAAACCTTCAGCAGAAAAT+TGG - chr2.2:58862631-58862650 None:intergenic 30.0%
TACCCCTCTTAAATATTTCA+TGG - chr2.2:58860305-58860324 None:intergenic 30.0%
TATCACACAAAAACAGAACA+GGG + chr2.2:58861955-58861974 MS.gene02035:CDS 30.0%
TCAGAGAATTTAGATAGTTC+TGG + chr2.2:58862498-58862517 MS.gene02035:intron 30.0%
TCTATTGTTAGTTAGACGTA+CGG + chr2.2:58860651-58860670 MS.gene02035:intron 30.0%
TGATGTATTATTGCTCAAAG+AGG - chr2.2:58860064-58860083 None:intergenic 30.0%
TGGTATTTGAAAAATGGAAG+AGG - chr2.2:58860550-58860569 None:intergenic 30.0%
TGTATGATGATTCAGAACAT+GGG + chr2.2:58861030-58861049 MS.gene02035:intron 30.0%
TTATCACACAAAAACAGAAC+AGG + chr2.2:58861954-58861973 MS.gene02035:CDS 30.0%
TTCATATGGCTGAAAAATTC+AGG + chr2.2:58863287-58863306 MS.gene02035:intron 30.0%
TTGCTTTCTTTAGGCATAAT+TGG + chr2.2:58861225-58861244 MS.gene02035:intron 30.0%
TTGTATGATGATTCAGAACA+TGG + chr2.2:58861029-58861048 MS.gene02035:intron 30.0%
TTTAAGAGGGGTAAAGATAA+AGG + chr2.2:58860312-58860331 MS.gene02035:CDS 30.0%
TTTGGGAAATTTCCATTCAA+AGG - chr2.2:58862215-58862234 None:intergenic 30.0%
! CGAAACCCATAAATTTTAAG+TGG - chr2.2:58862363-58862382 None:intergenic 30.0%
! GAATTCTAGTGATTCGTTTT+AGG - chr2.2:58861615-58861634 None:intergenic 30.0%
! GTTTTTGTGTGATAATCCTT+TGG - chr2.2:58861949-58861968 None:intergenic 30.0%
!! CATTTTTCAAATACCAGAGT+TGG + chr2.2:58860554-58860573 MS.gene02035:CDS 30.0%
!! TAGATAGTTCTGGAAATGTA+AGG + chr2.2:58862508-58862527 MS.gene02035:intron 30.0%
!! TGAATTTTTCAGCCATATGA+AGG - chr2.2:58863288-58863307 None:intergenic 30.0%
!! TTTCTAGCCTTGTAATATAC+AGG - chr2.2:58864206-58864225 None:intergenic 30.0%
!!! AAGTCTCTTGTTTTGCATTA+TGG - chr2.2:58863660-58863679 None:intergenic 30.0%
!!! AGTCTCTTGTTTTGCATTAT+GGG - chr2.2:58863659-58863678 None:intergenic 30.0%
AAAATTCATCGGTGCATTCT+AGG + chr2.2:58860261-58860280 MS.gene02035:CDS 35.0%
AAAGGATTGTCGAAGAATGA+AGG + chr2.2:58860330-58860349 MS.gene02035:CDS 35.0%
AAGGATTGTCGAAGAATGAA+GGG + chr2.2:58860331-58860350 MS.gene02035:CDS 35.0%
AAGGTTCAAACGGAAACTTA+AGG + chr2.2:58863612-58863631 MS.gene02035:CDS 35.0%
AATAAAGCTGGCAAATCCAA+TGG - chr2.2:58862431-58862450 None:intergenic 35.0%
AATACCAGCATAAACAAGAC+AGG - chr2.2:58863368-58863387 None:intergenic 35.0%
AATTCCCTCCACAATGATAT+CGG - chr2.2:58860235-58860254 None:intergenic 35.0%
ACCGTGAAAATCAATAAAGC+TGG - chr2.2:58862443-58862462 None:intergenic 35.0%
ACGAATCACTAGAATTCACA+AGG + chr2.2:58861618-58861637 MS.gene02035:CDS 35.0%
AGAACTTCAGAAACAACCTT+AGG - chr2.2:58861748-58861767 None:intergenic 35.0%
AGACGTCTTCTTAACTTTGT+AGG + chr2.2:58861367-58861386 MS.gene02035:CDS 35.0%
AGGTTCAAACGGAAACTTAA+GGG + chr2.2:58863613-58863632 MS.gene02035:CDS 35.0%
AGTCAACATGAAAATCTCTC+TGG - chr2.2:58863190-58863209 None:intergenic 35.0%
ATAGTATCCTCTTATGGTCA+CGG + chr2.2:58863735-58863754 MS.gene02035:intron 35.0%
ATAGTATCGCTTCTTACGAA+AGG + chr2.2:58861856-58861875 MS.gene02035:CDS 35.0%
ATCACACAAAAACAGAACAG+GGG + chr2.2:58861956-58861975 MS.gene02035:CDS 35.0%
ATTAGCGTCCTTTAATTGCA+AGG + chr2.2:58862716-58862735 MS.gene02035:intron 35.0%
CAAGAACATCAATGCATATC+CGG - chr2.2:58861999-58862018 None:intergenic 35.0%
CATCTTATGTTGGGCATATT+TGG + chr2.2:58861248-58861267 MS.gene02035:intron 35.0%
CTGGTTTACTATGTTTGTGT+TGG + chr2.2:58863440-58863459 MS.gene02035:intron 35.0%
CTGTCTTCAATGTTCTTATG+TGG + chr2.2:58863937-58863956 MS.gene02035:intron 35.0%
CTTCAATGTTCTTATGTGGT+GGG + chr2.2:58863941-58863960 MS.gene02035:intron 35.0%
GAAATTTCCATTCAAAGGCA+TGG - chr2.2:58862210-58862229 None:intergenic 35.0%
GAACATAAGCAAGAAGTTGA+AGG - chr2.2:58862137-58862156 None:intergenic 35.0%
GAACTTCAGAAACAACCTTA+GGG - chr2.2:58861747-58861766 None:intergenic 35.0%
GAAGAAGTCTTAACTGAGTA+AGG + chr2.2:58862948-58862967 MS.gene02035:intron 35.0%
GAATTCCGGTGAAAATTCAT+CGG + chr2.2:58860250-58860269 MS.gene02035:CDS 35.0%
GACGTCTTCTTAACTTTGTA+GGG + chr2.2:58861368-58861387 MS.gene02035:CDS 35.0%
GATTCACAAGTTACTGCATT+AGG + chr2.2:58862551-58862570 MS.gene02035:intron 35.0%
GCATAATTGGCATCTTATGT+TGG + chr2.2:58861238-58861257 MS.gene02035:intron 35.0%
GCTTAAAGATGATGTCAACA+AGG + chr2.2:58864106-58864125 MS.gene02035:CDS 35.0%
GTAATATACAGGCTCTCTAA+GGG - chr2.2:58864195-58864214 None:intergenic 35.0%
GTTTGGCTAATGTCAATCTT+CGG + chr2.2:58861776-58861795 MS.gene02035:CDS 35.0%
TAAACTTAAACCCTCTCCAA+TGG + chr2.2:58860443-58860462 MS.gene02035:CDS 35.0%
TAGAGAGCCTGTATATTACA+AGG + chr2.2:58864196-58864215 MS.gene02035:CDS 35.0%
TAGTATCGCTTCTTACGAAA+GGG + chr2.2:58861857-58861876 MS.gene02035:CDS 35.0%
TATCAGTATCCGATATGTGT+CGG + chr2.2:58860836-58860855 MS.gene02035:intron 35.0%
TCATAACCAACTTTGCCATA+AGG - chr2.2:58860387-58860406 None:intergenic 35.0%
TCATCTAGCAAAAGGAATTC+AGG + chr2.2:58862592-58862611 MS.gene02035:intron 35.0%
TCCACAGCAAAATTAATTGC+AGG - chr2.2:58860516-58860535 None:intergenic 35.0%
TCTCTATAACGATGTGGATT+CGG + chr2.2:58863793-58863812 MS.gene02035:intron 35.0%
TCTTCAATGTTCTTATGTGG+TGG + chr2.2:58863940-58863959 MS.gene02035:intron 35.0%
TCTTCTTAACTTTGTAGGGA+AGG + chr2.2:58861372-58861391 MS.gene02035:CDS 35.0%
TGATCCACGACAACAATATA+TGG - chr2.2:58862159-58862178 None:intergenic 35.0%
TGTAATATACAGGCTCTCTA+AGG - chr2.2:58864196-58864215 None:intergenic 35.0%
TGTTCAAACTTATAACCTCG+AGG - chr2.2:58860155-58860174 None:intergenic 35.0%
TGTTCCATATATTGTTGTCG+TGG + chr2.2:58862152-58862171 MS.gene02035:intron 35.0%
TGTTTGTGAAAAATGCCACT+CGG + chr2.2:58862332-58862351 MS.gene02035:intron 35.0%
TTACTATAAAGCTCCTTCCA+TGG - chr2.2:58862790-58862809 None:intergenic 35.0%
TTCCAAAGGGAAAAATAGTC+TGG - chr2.2:58863525-58863544 None:intergenic 35.0%
TTCTTGAAAGAGAAATGCGA+AGG + chr2.2:58862013-58862032 MS.gene02035:CDS 35.0%
TTCTTGAGCTATGCATATAG+TGG + chr2.2:58860420-58860439 MS.gene02035:CDS 35.0%
! ACCTGCAATTAATTTTGCTG+TGG + chr2.2:58860512-58860531 MS.gene02035:CDS 35.0%
! AGATGTCATTTCAATCCTCA+TGG + chr2.2:58861405-58861424 MS.gene02035:CDS 35.0%
! GAACAAGCTGAGTTCTAATT+TGG + chr2.2:58860170-58860189 MS.gene02035:CDS 35.0%
! GAAGAAGTTCTTGATGCTTT+TGG + chr2.2:58863106-58863125 MS.gene02035:intron 35.0%
! GCAATTACCTGTTTTCATCA+GGG - chr2.2:58863699-58863718 None:intergenic 35.0%
! TGCAATTACCTGTTTTCATC+AGG - chr2.2:58863700-58863719 None:intergenic 35.0%
!! AACTTTTTCTGAGAGCTCAT+GGG - chr2.2:58861527-58861546 None:intergenic 35.0%
!! AAGGTTGTTTCTGAAGTTCT+TGG + chr2.2:58861748-58861767 MS.gene02035:CDS 35.0%
!! AGAGTGCTGTTAGTATTTGT+AGG + chr2.2:58861911-58861930 MS.gene02035:CDS 35.0%
!! ATACTTTTTGGACACGTATC+GGG + chr2.2:58860799-58860818 MS.gene02035:intron 35.0%
!! ATTTTTCAGCCATATGAAGG+TGG - chr2.2:58863285-58863304 None:intergenic 35.0%
!! CAAGAGACTTATTTCTAGGA+TGG + chr2.2:58863670-58863689 MS.gene02035:CDS 35.0%
!! GATACTTTTTGGACACGTAT+CGG + chr2.2:58860798-58860817 MS.gene02035:intron 35.0%
!! GTTTCTGAAGTTCTTGGATT+GGG + chr2.2:58861754-58861773 MS.gene02035:CDS 35.0%
!! TAACTTTTTCTGAGAGCTCA+TGG - chr2.2:58861528-58861547 None:intergenic 35.0%
!! TGTTTCTGAAGTTCTTGGAT+TGG + chr2.2:58861753-58861772 MS.gene02035:CDS 35.0%
!!! AGTAACAGGTTGCTGTTTTT+AGG + chr2.2:58862805-58862824 MS.gene02035:intron 35.0%
!!! GCCAGCTTTATTGATTTTCA+CGG + chr2.2:58862439-58862458 MS.gene02035:intron 35.0%
!!! GTAACAGGTTGCTGTTTTTA+GGG + chr2.2:58862806-58862825 MS.gene02035:intron 35.0%
AAACAAGGCAAAATCGATGC+TGG - chr2.2:58863151-58863170 None:intergenic 40.0%
AAACTCCAAAATGGGAAGCA+AGG - chr2.2:58862309-58862328 None:intergenic 40.0%
AAGAAGAGCAAAGAGTCAAG+AGG + chr2.2:58864069-58864088 MS.gene02035:CDS 40.0%
AGAAATGCGAAGGAATCCTT+TGG + chr2.2:58862023-58862042 MS.gene02035:CDS 40.0%
AGCACTCAGTGAAAAGGATT+AGG + chr2.2:58863021-58863040 MS.gene02035:intron 40.0%
AGGAGCAACTGATCTTATAG+AGG + chr2.2:58863084-58863103 MS.gene02035:intron 40.0%
AGGGCATATGTTGTGACTAA+TGG - chr2.2:58860109-58860128 None:intergenic 40.0%
AGTATCGCTTCTTACGAAAG+GGG + chr2.2:58861858-58861877 MS.gene02035:CDS 40.0%
AGTCACAACATATGCCCTAA+TGG + chr2.2:58860111-58860130 MS.gene02035:CDS 40.0%
ATGACAGTTGCGTCTTTAGT+TGG + chr2.2:58860700-58860719 MS.gene02035:intron 40.0%
ATGATTCAGAACATGGGAAG+AGG + chr2.2:58861036-58861055 MS.gene02035:intron 40.0%
CAAATCCTAATCACTCGCAA+GGG - chr2.2:58862657-58862676 None:intergenic 40.0%
CAAGGTACAAAAGCTTCATG+TGG - chr2.2:58862092-58862111 None:intergenic 40.0%
CACTAGAATTCACAAGGCAT+TGG + chr2.2:58861624-58861643 MS.gene02035:CDS 40.0%
CCTTAATCAGTGAAGACAGA+TGG - chr2.2:58862991-58863010 None:intergenic 40.0%
CGGTTAACTCTGGGTTTATA+CGG + chr2.2:58863813-58863832 MS.gene02035:intron 40.0%
CTTGACTCTTTGCTCTTCTT+GGG - chr2.2:58864069-58864088 None:intergenic 40.0%
GCTCTTTCTCAATTGAGATC+TGG - chr2.2:58861501-58861520 None:intergenic 40.0%
GGAAATGTAAGGCTGGAATT+TGG + chr2.2:58862519-58862538 MS.gene02035:intron 40.0%
GTGACTTCTCTATAACGATG+TGG + chr2.2:58863787-58863806 MS.gene02035:intron 40.0%
TAAGGTGAATCCAATGACCA+AGG - chr2.2:58862840-58862859 None:intergenic 40.0%
TAATTCCCTTGCGAGTGATT+AGG + chr2.2:58862649-58862668 MS.gene02035:intron 40.0%
TACGGAACACGTATTGTATC+CGG + chr2.2:58860669-58860688 MS.gene02035:intron 40.0%
TATCATTGTGGAGGGAATTC+CGG + chr2.2:58860236-58860255 MS.gene02035:CDS 40.0%
TCAATCTTCGGAATTCTCGA+GGG + chr2.2:58861788-58861807 MS.gene02035:CDS 40.0%
TCATCTTCGCACTTGTCAAA+TGG + chr2.2:58860081-58860100 MS.gene02035:CDS 40.0%
TCGGCATCAAAAGGTTCAAA+CGG + chr2.2:58863602-58863621 MS.gene02035:CDS 40.0%
TCTCAATTGAGATCTGGTCA+AGG - chr2.2:58861495-58861514 None:intergenic 40.0%
TCTTGACTCTTTGCTCTTCT+TGG - chr2.2:58864070-58864089 None:intergenic 40.0%
TCTTTAACTCCTTGTGCAAC+TGG + chr2.2:58862390-58862409 MS.gene02035:intron 40.0%
TGCAATGTCCATGGCTAATT+TGG - chr2.2:58863549-58863568 None:intergenic 40.0%
TGGAAAAGTGATACCAACTC+TGG - chr2.2:58860570-58860589 None:intergenic 40.0%
TTCAAACGGAAACTTAAGGG+AGG + chr2.2:58863616-58863635 MS.gene02035:CDS 40.0%
TTCGTTTCCATGCCTTTGAA+TGG + chr2.2:58862200-58862219 MS.gene02035:intron 40.0%
TTGGTCATTGGATTCACCTT+AGG + chr2.2:58862839-58862858 MS.gene02035:intron 40.0%
TTGTTGCCTTATGGCAAAGT+TGG + chr2.2:58860378-58860397 MS.gene02035:CDS 40.0%
TTTGGAAGCCAAATTAGCCA+TGG + chr2.2:58863538-58863557 MS.gene02035:CDS 40.0%
! ATGGCTAATTTGGCTTCCAA+AGG - chr2.2:58863539-58863558 None:intergenic 40.0%
! ATGTGGATTCGGTTAACTCT+GGG + chr2.2:58863804-58863823 MS.gene02035:intron 40.0%
! CCATCTGTCTTCACTGATTA+AGG + chr2.2:58862988-58863007 MS.gene02035:intron 40.0%
! CGTTTTCATCATCCTGATGA+AGG - chr2.2:58861567-58861586 None:intergenic 40.0%
! CTTTTGTACCTTGAGAACAG+AGG + chr2.2:58862099-58862118 MS.gene02035:CDS 40.0%
! GGAAGGAGCTTTATAGTAAC+AGG + chr2.2:58862791-58862810 MS.gene02035:intron 40.0%
! GTGCTGTTAGTATTTGTAGG+AGG + chr2.2:58861914-58861933 MS.gene02035:CDS 40.0%
! TGAAGTTCTTGGATTGGGTT+TGG + chr2.2:58861759-58861778 MS.gene02035:CDS 40.0%
! TGGCTAATTTGGCTTCCAAA+GGG - chr2.2:58863538-58863557 None:intergenic 40.0%
!! ACTTTTTCTGAGAGCTCATG+GGG - chr2.2:58861526-58861545 None:intergenic 40.0%
!! ATGCACCGATGAATTTTCAC+CGG - chr2.2:58860258-58860277 None:intergenic 40.0%
!! CGAGTTGATTCAGTTGACAA+TGG - chr2.2:58861438-58861457 None:intergenic 40.0%
!! GAGACTTATTTCTAGGATGG+AGG + chr2.2:58863673-58863692 MS.gene02035:CDS 40.0%
!! TAGTTCTGGAAATGTAAGGC+TGG + chr2.2:58862512-58862531 MS.gene02035:intron 40.0%
!! TGCCAGACTATTTTTCCCTT+TGG + chr2.2:58863520-58863539 MS.gene02035:CDS 40.0%
!! TTGAGCGATTTGTTGCCTTA+TGG + chr2.2:58860369-58860388 MS.gene02035:CDS 40.0%
!! TTTGCTGTTGCATTACGAAG+AGG + chr2.2:58862673-58862692 MS.gene02035:intron 40.0%
!! TTTTAAGTGGTTCTTCCGAG+TGG - chr2.2:58862350-58862369 None:intergenic 40.0%
!!! AGAGTTGGTATCACTTTTCC+AGG + chr2.2:58860569-58860588 MS.gene02035:CDS 40.0%
!!! TTTTTAGGGTTCTTGCTCCT+TGG + chr2.2:58862820-58862839 MS.gene02035:intron 40.0%
AAACAACCTTAGGGTCACAG+TGG - chr2.2:58861738-58861757 None:intergenic 45.0%
AAAGCTGAGTTTAGTCGCTC+TGG + chr2.2:58864143-58864162 MS.gene02035:CDS 45.0%
AACAACCTTAGGGTCACAGT+GGG - chr2.2:58861737-58861756 None:intergenic 45.0%
AAGCTGAGTTTAGTCGCTCT+GGG + chr2.2:58864144-58864163 MS.gene02035:CDS 45.0%
AATTGAAGGCTCCTTACGCA+TGG - chr2.2:58861836-58861855 None:intergenic 45.0%
ACACATGTAGACACCTCCAT+TGG - chr2.2:58860462-58860481 None:intergenic 45.0%
ACGGAACACGTATTGTATCC+GGG + chr2.2:58860670-58860689 MS.gene02035:intron 45.0%
ACTTAAACCCTCTCCAATGG+AGG + chr2.2:58860446-58860465 MS.gene02035:CDS 45.0%
AGCTGGAGCAAGAACAAGTA+TGG - chr2.2:58863056-58863075 None:intergenic 45.0%
AGGAATTCAGGCGCAAACAA+AGG + chr2.2:58862604-58862623 MS.gene02035:intron 45.0%
ATCCAATGGTCAGCTTTCTG+AGG - chr2.2:58862417-58862436 None:intergenic 45.0%
ATCGGTGCATTCTAGGTTCT+AGG + chr2.2:58860268-58860287 MS.gene02035:CDS 45.0%
CTAAAGACGCAACTGTCATC+CGG - chr2.2:58860699-58860718 None:intergenic 45.0%
CTTAGAGCATGAAAGGGAGA+AGG + chr2.2:58862926-58862945 MS.gene02035:intron 45.0%
GACAATGGAAAGCAACCATG+AGG - chr2.2:58861423-58861442 None:intergenic 45.0%
GATGCCGATATCATTGTGGA+GGG + chr2.2:58860228-58860247 MS.gene02035:CDS 45.0%
GCAAATCCTAATCACTCGCA+AGG - chr2.2:58862658-58862677 None:intergenic 45.0%
GGAATTCAGGCGCAAACAAA+GGG + chr2.2:58862605-58862624 MS.gene02035:intron 45.0%
GTAAGGCTGGAATTTGGAAG+TGG + chr2.2:58862525-58862544 MS.gene02035:intron 45.0%
GTACCTTGAGAACAGAGGTA+TGG + chr2.2:58862104-58862123 MS.gene02035:intron 45.0%
GTATTTGTAGGAGGTTGACG+AGG + chr2.2:58861923-58861942 MS.gene02035:CDS 45.0%
GTCAATCTTCGGAATTCTCG+AGG + chr2.2:58861787-58861806 MS.gene02035:CDS 45.0%
GTTTGTGCTCATGATGCTTG+CGG + chr2.2:58860489-58860508 MS.gene02035:CDS 45.0%
TAAAGACGCAACTGTCATCC+GGG - chr2.2:58860698-58860717 None:intergenic 45.0%
TCACCATACCTCTGTTCTCA+AGG - chr2.2:58862110-58862129 None:intergenic 45.0%
TCTTCGTCATGTACCATGGA+AGG + chr2.2:58862774-58862793 MS.gene02035:intron 45.0%
TGAAAACGATGCTCCTGTAG+TGG + chr2.2:58861579-58861598 MS.gene02035:CDS 45.0%
TGAGTGAGCACTCAGTGAAA+AGG + chr2.2:58863015-58863034 MS.gene02035:intron 45.0%
TGATGCCGATATCATTGTGG+AGG + chr2.2:58860227-58860246 MS.gene02035:CDS 45.0%
TGCCACTCTGTCAACACATT+GGG - chr2.2:58861464-58861483 None:intergenic 45.0%
TTCCATGGTACATGACGAAG+AGG - chr2.2:58862775-58862794 None:intergenic 45.0%
! AAGGGCCAATTTTCTGCTGA+AGG + chr2.2:58862623-58862642 MS.gene02035:intron 45.0%
! AGTATCCGATATGTGTCGGT+CGG + chr2.2:58860840-58860859 MS.gene02035:intron 45.0%
! GAGGTCACACGTTTGAGTTA+TGG + chr2.2:58862692-58862711 MS.gene02035:intron 45.0%
! GATGTGGATTCGGTTAACTC+TGG + chr2.2:58863803-58863822 MS.gene02035:intron 45.0%
! GCATCGGATTTGACTTTCGA+TGG + chr2.2:58861886-58861905 MS.gene02035:CDS 45.0%
! GCGCTACTTTCCTAATTGCT+CGG + chr2.2:58863983-58864002 MS.gene02035:CDS 45.0%
! GTGATCCTTGCTTCCCATTT+TGG + chr2.2:58862301-58862320 MS.gene02035:intron 45.0%
! TGGTGATGCCGATATCATTG+TGG + chr2.2:58860224-58860243 MS.gene02035:CDS 45.0%
!! ATCCGAGTTTGCTGGTCTTT+CGG + chr2.2:58863583-58863602 MS.gene02035:CDS 45.0%
!!! TATTTTTTTTTAATTAAAAC+TGG - chr2.2:58863230-58863249 None:intergenic 5.0%
ACAGAGGGATCTGTAGCCAA+AGG - chr2.2:58862042-58862061 None:intergenic 50.0%
ACGTATTGTATCCGGGATCC+CGG + chr2.2:58860677-58860696 MS.gene02035:intron 50.0%
ACTGTGTGGGAAGACACAGA+GGG - chr2.2:58862057-58862076 None:intergenic 50.0%
AGTGCTCGACAAGTTCATGG+AGG + chr2.2:58864007-58864026 MS.gene02035:CDS 50.0%
ATGGAGGCCCTGATGAAAAC+AGG + chr2.2:58863689-58863708 MS.gene02035:CDS 50.0%
CATCATCCTGATGAAGGTCG+CGG - chr2.2:58861561-58861580 None:intergenic 50.0%
CTCGAGGTTACGAGCATGAT+CGG - chr2.2:58860139-58860158 None:intergenic 50.0%
CTTGCTCCAGCTCTCAGATT+AGG + chr2.2:58863064-58863083 MS.gene02035:intron 50.0%
CTTTGTAGGGAAGGCTCTTG+TGG + chr2.2:58861381-58861400 MS.gene02035:CDS 50.0%
GACCTCAGAAAGCTGACCAT+TGG + chr2.2:58862412-58862431 MS.gene02035:intron 50.0%
GACCTCTTCGTCATGTACCA+TGG + chr2.2:58862770-58862789 MS.gene02035:intron 50.0%
GAGACAACATCCGAGTTTGC+TGG + chr2.2:58863575-58863594 MS.gene02035:CDS 50.0%
GAGATCATCAGCCACTGTGT+GGG - chr2.2:58862070-58862089 None:intergenic 50.0%
GAGCATGATCGGAGCCATTA+GGG - chr2.2:58860128-58860147 None:intergenic 50.0%
GGCTGGAATTTGGAAGTGGT+TGG + chr2.2:58862529-58862548 MS.gene02035:intron 50.0%
GGTTCTTGCTCCTTGGTCAT+TGG + chr2.2:58862827-58862846 MS.gene02035:intron 50.0%
GTACATGACGAAGAGGTCAC+AGG - chr2.2:58862768-58862787 None:intergenic 50.0%
GTAGACACCTCCATTGGAGA+GGG - chr2.2:58860456-58860475 None:intergenic 50.0%
GTTGCTCCTAATCTGAGAGC+TGG - chr2.2:58863073-58863092 None:intergenic 50.0%
TACGAAAGGGGCTTGTGCAT+CGG + chr2.2:58861870-58861889 MS.gene02035:CDS 50.0%
TCACATTGCTGCCATGCGTA+AGG + chr2.2:58861822-58861841 MS.gene02035:CDS 50.0%
TCGAGCACTTCCGAGCAATT+AGG - chr2.2:58863996-58864015 None:intergenic 50.0%
TGCCGAAAGACCAGCAAACT+CGG - chr2.2:58863588-58863607 None:intergenic 50.0%
TGTAGACACCTCCATTGGAG+AGG - chr2.2:58860457-58860476 None:intergenic 50.0%
TGTTGACAGAGTGGCACGAT+CGG + chr2.2:58861468-58861487 MS.gene02035:CDS 50.0%
TTGTCGTGGATCAAGCTTCG+AGG + chr2.2:58862166-58862185 MS.gene02035:intron 50.0%
! AGGCTCTCTAAGGGATGAAG+AGG - chr2.2:58864186-58864205 None:intergenic 50.0%
! AGGGACAAAGTGTCCACTAC+AGG - chr2.2:58861595-58861614 None:intergenic 50.0%
! GTGCCACTCTGTCAACACAT+TGG - chr2.2:58861465-58861484 None:intergenic 50.0%
! TGCCCAATGTGTTGACAGAG+TGG + chr2.2:58861459-58861478 MS.gene02035:CDS 50.0%
!! CAGGCCTGTCTTGTTTATGC+TGG + chr2.2:58863361-58863380 MS.gene02035:intron 50.0%
!! GCTGGTCTTTCGGCATCAAA+AGG + chr2.2:58863593-58863612 MS.gene02035:CDS 50.0%
!! GGAAGTGCTCGACAAGTTCA+TGG + chr2.2:58864004-58864023 MS.gene02035:CDS 50.0%
!! TTCTGAGGTCCAGTTGCACA+AGG - chr2.2:58862402-58862421 None:intergenic 50.0%
AGCATTGCTGTCTGCTGCAG+TGG + chr2.2:58863493-58863512 MS.gene02035:intron 55.0%
AGTAGCCCACTGTGACCCTA+AGG + chr2.2:58861729-58861748 MS.gene02035:CDS 55.0%
ATGGTCACGGCGACTTCCAA+TGG + chr2.2:58863748-58863767 MS.gene02035:intron 55.0%
CACTGTGTGGGAAGACACAG+AGG - chr2.2:58862058-58862077 None:intergenic 55.0%
CGACTTCCAATGGAATCGCG+GGG + chr2.2:58863758-58863777 MS.gene02035:intron 55.0%
CGAGCATGATCGGAGCCATT+AGG - chr2.2:58860129-58860148 None:intergenic 55.0%
CGATCATGCTCGTAACCTCG+AGG + chr2.2:58860137-58860156 MS.gene02035:CDS 55.0%
CTCTGCACGTGCAATGTCCA+TGG - chr2.2:58863558-58863577 None:intergenic 55.0%
CTCTGTGTCTTCCCACACAG+TGG + chr2.2:58862056-58862075 MS.gene02035:CDS 55.0%
CTTCTTGGGTGCCCTTCTCA+AGG - chr2.2:58864055-58864074 None:intergenic 55.0%
GAAGTCGCCGTGACCATAAG+AGG - chr2.2:58863745-58863764 None:intergenic 55.0%
GCGACTTCCAATGGAATCGC+GGG + chr2.2:58863757-58863776 MS.gene02035:intron 55.0%
GCGCTGAGACCACCTTCATA+TGG + chr2.2:58863273-58863292 MS.gene02035:intron 55.0%
GGAGATCATCAGCCACTGTG+TGG - chr2.2:58862071-58862090 None:intergenic 55.0%
GGCGACTTCCAATGGAATCG+CGG + chr2.2:58863756-58863775 MS.gene02035:intron 55.0%
TAGGAGGTTGACGAGGCCAA+AGG + chr2.2:58861930-58861949 MS.gene02035:CDS 55.0%
! TGGTGGGTGTCAGTCGAGAT+GGG + chr2.2:58863957-58863976 MS.gene02035:intron 55.0%
!! CACAGTGGGCTACTGCATAG+TGG - chr2.2:58861723-58861742 None:intergenic 55.0%
!! GAGCACCGACCGACACATAT+CGG - chr2.2:58860848-58860867 None:intergenic 55.0%
CATCCTGATGAAGGTCGCGG+CGG - chr2.2:58861558-58861577 None:intergenic 60.0%
GCAACTGTCATCCGGGATCC+CGG - chr2.2:58860691-58860710 None:intergenic 60.0%
GGTGGGTGTCAGTCGAGATG+GGG + chr2.2:58863958-58863977 MS.gene02035:intron 60.0%
!! GTGGTGGGTGTCAGTCGAGA+TGG + chr2.2:58863956-58863975 MS.gene02035:intron 60.0%
CAATGGAATCGCGGGGCAGC+AGG + chr2.2:58863765-58863784 MS.gene02035:intron 65.0%
CTGCTGCCCCGCGATTCCAT+TGG - chr2.2:58863767-58863786 None:intergenic 65.0%
GGGTGTCAGTCGAGATGGGG+CGG + chr2.2:58863961-58863980 MS.gene02035:intron 65.0%
GCTCCGCCGCGACCTTCATC+AGG + chr2.2:58861552-58861571 MS.gene02035:CDS 70.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 58860042 58864232 58860042 ID=MS.gene02035
chr2.2 mRNA 58860042 58864232 58860042 ID=MS.gene02035.t1;Parent=MS.gene02035
chr2.2 exon 58860042 58860590 58860042 ID=MS.gene02035.t1.exon1;Parent=MS.gene02035.t1
chr2.2 CDS 58860042 58860590 58860042 ID=cds.MS.gene02035.t1;Parent=MS.gene02035.t1
chr2.2 exon 58861367 58862120 58861367 ID=MS.gene02035.t1.exon2;Parent=MS.gene02035.t1
chr2.2 CDS 58861367 58862120 58861367 ID=cds.MS.gene02035.t1;Parent=MS.gene02035.t1
chr2.2 exon 58863513 58863710 58863513 ID=MS.gene02035.t1.exon3;Parent=MS.gene02035.t1
chr2.2 CDS 58863513 58863710 58863513 ID=cds.MS.gene02035.t1;Parent=MS.gene02035.t1
chr2.2 exon 58863970 58864232 58863970 ID=MS.gene02035.t1.exon4;Parent=MS.gene02035.t1
chr2.2 CDS 58863970 58864232 58863970 ID=cds.MS.gene02035.t1;Parent=MS.gene02035.t1
Gene Sequence

>MS.gene02035

ATGGCTAATTCGGCTGAACCCTCTTTGAGCAATAATACATCATCTTCGCACTTGTCAAATGGATCCATTAGTCACAACATATGCCCTAATGGCTCCGATCATGCTCGTAACCTCGAGGTTATAAGTTTGAACAAGCTGAGTTCTAATTTGGAGCAGCTTTTGATTGATTCTGATTATGATTATGGTGATGCCGATATCATTGTGGAGGGAATTCCGGTGAAAATTCATCGGTGCATTCTAGGTTCTAGGAGTAAGTTTTTCCATGAAATATTTAAGAGGGGTAAAGATAAAGGATTGTCGAAGAATGAAGGGAAATTGAAGTATTGTTTGAGCGATTTGTTGCCTTATGGCAAAGTTGGTTATGAAGCTTTTCTTATATTCTTGAGCTATGCATATAGTGGTAAACTTAAACCCTCTCCAATGGAGGTGTCTACATGTGTTGATAATGTTTGTGCTCATGATGCTTGCGGACCTGCAATTAATTTTGCTGTGGAGTTAATGTATGCCTCTTCCATTTTTCAAATACCAGAGTTGGTATCACTTTTCCAGGTAAACATTATATCTATGATGATAGTTATGAATCTGTCACAAGAAACATACAATTCAATGTCTATTGTTAGTTAGACGTACGGAACACGTATTGTATCCGGGATCCCGGATGACAGTTGCGTCTTTAGTTGGTAAAAAGCATTGAAGATGTATTTGAGAAGTATTGGTGAAAATACATATTTTTTAAAATAATATATATTATTATCAGATACTTTTTGGACACGTATCGGGAAGTATGAGATGCTTATCAGTATCCGATATGTGTCGGTCGGTGCTCTTTTATTTTTGAAGTATTTGGGCTTCATAGCTGCTACTTGACCCCCACTTGAACATTTTTCTATATGTCCTTTCTGTTTTCTCTATATTATGAAATTTAGTTCAAGTTTAGGAATAATTAATTATCTGTTAGGCTATTGTCATGTTCTATGCCAAGATGTTTTGTATGATGATTCAGAACATGGGAAGAGGTTTCATATATCTAGCAAGTAGTAGTGCGTGCTTCAATATAAATGATTTCCTTTTCCAAAACAAATTTCTTACTATACATGTATTATTGTTGATTGAATACAACTTTTACTTTTGTTGATTTTGAAGGGATTTGAAATTAAACTCTATGATCAATACGCCATATATCTTGCTTTCTTTAGGCATAATTGGCATCTTATGTTGGGCATATTTGGAAAATTGCAAACTAATTTCACATCTGAATTACTAGTCATATTGTATCTGATCAAGGTTAAGGATTGAGAAACTAAGTATTACTTCAAATTTTGCAGAGACGTCTTCTTAACTTTGTAGGGAAGGCTCTTGTGGAAGATGTCATTTCAATCCTCATGGTTGCTTTCCATTGTCAACTGAATCAACTCGTTGCCCAATGTGTTGACAGAGTGGCACGATCGGACCTTGACCAGATCTCAATTGAGAAAGAGCTTCCCCATGAGCTCTCAGAAAAAGTTAAATTGCTCCGCCGCGACCTTCATCAGGATGATGAAAACGATGCTCCTGTAGTGGACACTTTGTCCCTAAAACGAATCACTAGAATTCACAAGGCATTGGACTCAGACGACGTCGAGCTTGTTAAACTTCTTTTAAACGAGTCAGACATTACTTTTGATGAAGCTAGTGCTCTCCACTATGCAGTAGCCCACTGTGACCCTAAGGTTGTTTCTGAAGTTCTTGGATTGGGTTTGGCTAATGTCAATCTTCGGAATTCTCGAGGGTATACAGTGCTTCACATTGCTGCCATGCGTAAGGAGCCTTCAATTATAGTATCGCTTCTTACGAAAGGGGCTTGTGCATCGGATTTGACTTTCGATGGTCAGAGTGCTGTTAGTATTTGTAGGAGGTTGACGAGGCCAAAGGATTATCACACAAAAACAGAACAGGGGAAAGAAACAAATAAAGACCGGATATGCATTGATGTTCTTGAAAGAGAAATGCGAAGGAATCCTTTGGCTACAGATCCCTCTGTGTCTTCCCACACAGTGGCTGATGATCTCCACATGAAGCTTTTGTACCTTGAGAACAGAGGTATGGTGATATTCCTTCAACTTCTTGCTTATGTTCCATATATTGTTGTCGTGGATCAAGCTTCGAGGATTTTAAATGCTTCGTTTCCATGCCTTTGAATGGAAATTTCCCAAAACTGAGTCATTTTGTTTTCATACTTCTTTTTGTGTATATTTCTATTTTACTTTGTATTTGATCAGTGTGATCCTTGCTTCCCATTTTGGAGTTTTTTTGTTTGTGAAAAATGCCACTCGGAAGAACCACTTAAAATTTATGGGTTTCGATTGTGTTCTTTAACTCCTTGTGCAACTGGACCTCAGAAAGCTGACCATTGGATTTGCCAGCTTTATTGATTTTCACGGTAACAGTTTTGACACCAACTTTATGTAATTTTGAACTCAGAGAATTTAGATAGTTCTGGAAATGTAAGGCTGGAATTTGGAAGTGGTTGGATTCACAAGTTACTGCATTAGGGTGTAGAGTTCTAAAGTTTCATCTAGCAAAAGGAATTCAGGCGCAAACAAAGGGCCAATTTTCTGCTGAAGGTTTTAATTCCCTTGCGAGTGATTAGGATTTGCTGTTGCATTACGAAGAGGTCACACGTTTGAGTTATGGTATTAGCGTCCTTTAATTGCAAGGTAAGATTGTTTACACAATAGATCAAACCTGTGACCTCTTCGTCATGTACCATGGAAGGAGCTTTATAGTAACAGGTTGCTGTTTTTAGGGTTCTTGCTCCTTGGTCATTGGATTCACCTTAGGAAAATATTGTTTAAAATAAAAAGTTGAGATGTAGAAAAGTGCAAGCATTTTACTCTGAATATAGCTTAGAGCATGAAAGGGAGAAGGAAGAAGTCTTAACTGAGTAAGGAAGAAGTCAAACTCATACCATCTGTCTTCACTGATTAAGGAGTTTGAGTGAGCACTCAGTGAAAAGGATTAGGAAAGCTCGTCCATACTTGTTCTTGCTCCAGCTCTCAGATTAGGAGCAACTGATCTTATAGAGGAAGAAGTTCTTGATGCTTTTGGACGTCTTTCACAAACGCTACCAGCATCGATTTTGCCTTGTTTCATTTGTAGCTAAATGCCAGAGAGATTTTCATGTTGACTTGAATAATTTCTTAATTCCAGTTTTAATTAAAAAAAAATAAGAAATGATATTTTTTAAAAGAAGCGCTGAGACCACCTTCATATGGCTGAAAAATTCAGGAGCTAGTTTCTATAAAACCTTTTTTTTTTTTTTTTTTTAAATTTTCTGTTTCAGGCCTGTCTTGTTTATGCTGGTATTTCATTCTCTTAATAAATATGATGTTTGACTTCTTTTTGAATGTTATGTTCAACTGGTTTACTATGTTTGTGTTGGTTTTTTATTCTCAAAAACCATCAAATAATAAGCATTGCTGTCTGCTGCAGTGGCATTTGCCAGACTATTTTTCCCTTTGGAAGCCAAATTAGCCATGGACATTGCACGTGCAGAGACAACATCCGAGTTTGCTGGTCTTTCGGCATCAAAAGGTTCAAACGGAAACTTAAGGGAGGTTGATCTCAATGAAACTCCCATAATGCAAAACAAGAGACTTATTTCTAGGATGGAGGCCCTGATGAAAACAGGTAATTGCAATCTTTTGCTATTTAATAGTATCCTCTTATGGTCACGGCGACTTCCAATGGAATCGCGGGGCAGCAGGTGACTTCTCTATAACGATGTGGATTCGGTTAACTCTGGGTTTATACGGTTAGAGAAGCCATCTGATTCTCTGATTGATTTCAACTGTCTTTAGTTTTGATTAGATTTCGCTTTATTTATCCATGTTTCTATGTACAATTCTAAGTCTTACTGTCTTCAATGTTCTTATGTGGTGGGTGTCAGTCGAGATGGGGCGGCGCTACTTTCCTAATTGCTCGGAAGTGCTCGACAAGTTCATGGAGGATGACCTACCTGATTTGTTTTACCTTGAGAAGGGCACCCAAGAAGAGCAAAGAGTCAAGAGGACGAGATTCGTTGAGCTTAAAGATGATGTCAACAAGGCTTTCAGCAAAGACAAAGCTGAGTTTAGTCGCTCTGGGATTTCATCTTCATCATCCTCTTCATCCCTTAGAGAGCCTGTATATTACAAGGCTAGAAAAATGTGA
Protein sequence

>MS.gene02035.t1

MANSAEPSLSNNTSSSHLSNGSISHNICPNGSDHARNLEVISLNKLSSNLEQLLIDSDYDYGDADIIVEGIPVKIHRCILGSRSKFFHEIFKRGKDKGLSKNEGKLKYCLSDLLPYGKVGYEAFLIFLSYAYSGKLKPSPMEVSTCVDNVCAHDACGPAINFAVELMYASSIFQIPELVSLFQRRLLNFVGKALVEDVISILMVAFHCQLNQLVAQCVDRVARSDLDQISIEKELPHELSEKVKLLRRDLHQDDENDAPVVDTLSLKRITRIHKALDSDDVELVKLLLNESDITFDEASALHYAVAHCDPKVVSEVLGLGLANVNLRNSRGYTVLHIAAMRKEPSIIVSLLTKGACASDLTFDGQSAVSICRRLTRPKDYHTKTEQGKETNKDRICIDVLEREMRRNPLATDPSVSSHTVADDLHMKLLYLENRVAFARLFFPLEAKLAMDIARAETTSEFAGLSASKGSNGNLREVDLNETPIMQNKRLISRMEALMKTVEMGRRYFPNCSEVLDKFMEDDLPDLFYLEKGTQEEQRVKRTRFVELKDDVNKAFSKDKAEFSRSGISSSSSSSSLREPVYYKARKM