AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene020352

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene020352.t1 MTR_7g096610 96.875 224 6 1 1 223 1 224 1.09e-165 456
MS.gene020352.t1 MTR_1g070205 71.204 191 45 5 8 194 12 196 1.47e-92 271
MS.gene020352.t1 MTR_7g096530 73.585 106 28 0 3 108 9 114 3.19e-55 176
MS.gene020352.t1 MTR_5g080470 55.782 147 61 2 2 145 1 146 2.72e-52 167
MS.gene020352.t1 MTR_8g036085 50.000 176 65 3 8 162 23 196 1.02e-51 167
MS.gene020352.t1 MTR_1g070220 70.192 104 31 0 5 108 12 115 2.94e-49 160
MS.gene020352.t1 MTR_7g074990 71.287 101 29 0 8 108 20 120 3.57e-49 161
MS.gene020352.t1 MTR_8g036105 66.667 105 35 0 6 110 16 120 1.29e-48 159
MS.gene020352.t1 MTR_6g027710 63.889 108 39 0 7 114 39 146 1.05e-46 154
MS.gene020352.t1 MTR_7g075230 64.706 119 37 4 6 122 10 125 1.67e-45 150
MS.gene020352.t1 MTR_3g071590 43.919 148 80 2 1 148 1 145 2.80e-36 125
MS.gene020352.t1 MTR_5g083230 45.625 160 72 5 4 162 2 147 6.18e-36 125
MS.gene020352.t1 MTR_6g027700 55.446 101 45 0 8 108 7 107 4.66e-35 124
MS.gene020352.t1 MTR_4g083680 52.830 106 49 1 4 109 11 115 9.01e-34 119
MS.gene020352.t1 MTR_3g031660 44.516 155 79 6 4 157 2 150 1.02e-33 119
MS.gene020352.t1 MTR_7g033800 56.122 98 42 1 5 102 8 104 3.34e-33 118
MS.gene020352.t1 MTR_2g068760 55.000 100 44 1 4 103 9 107 7.84e-33 116
MS.gene020352.t1 MTR_5g083010 41.250 160 76 4 5 164 8 149 8.06e-33 117
MS.gene020352.t1 MTR_3g452660 50.877 114 55 1 2 115 1 113 9.65e-33 120
MS.gene020352.t1 MTR_4g105170 57.292 96 40 1 7 102 10 104 1.45e-32 117
MS.gene020352.t1 MTR_5g083960 53.398 103 45 2 7 108 38 138 1.68e-32 117
MS.gene020352.t1 MTR_3g077240 56.250 96 41 1 7 102 9 103 7.02e-32 115
MS.gene020352.t1 MTR_3g094690 55.446 101 42 2 7 106 46 144 1.13e-31 115
MS.gene020352.t1 MTR_5g017950 51.818 110 52 1 1 110 1 109 3.27e-31 116
MS.gene020352.t1 MTR_3g071420 49.515 103 51 1 5 107 11 112 5.03e-31 112
MS.gene020352.t1 MTR_6g005070 53.061 98 45 1 5 102 6 102 5.89e-31 111
MS.gene020352.t1 MTR_3g073690 48.182 110 56 1 1 110 2 110 1.28e-30 112
MS.gene020352.t1 MTR_3g094690 55.446 101 41 3 7 106 46 143 7.05e-30 111
MS.gene020352.t1 MTR_2g093310 51.546 97 46 1 7 103 32 127 8.63e-30 110
MS.gene020352.t1 MTR_6g005080 50.485 103 49 2 1 102 2 103 3.87e-29 106
MS.gene020352.t1 MTR_4g060950 53.061 98 44 2 7 103 23 119 2.42e-27 103
MS.gene020352.t1 MTR_5g075020 55.340 103 43 2 7 108 42 142 1.60e-26 102
MS.gene020352.t1 MTR_1g095850 51.579 95 45 1 9 103 73 166 2.13e-26 102
MS.gene020352.t1 MTR_5g075020 55.340 103 43 2 7 108 46 146 3.09e-26 101
MS.gene020352.t1 MTR_8g040900 55.172 87 38 1 2 88 1 86 3.17e-25 99.0
MS.gene020352.t1 MTR_5g093010 40.000 140 77 3 9 148 6 138 5.80e-25 95.9
MS.gene020352.t1 MTR_7g028905 43.269 104 58 1 7 110 4 106 3.10e-24 93.2
MS.gene020352.t1 MTR_8g079660 37.500 104 64 1 8 111 8 110 8.04e-19 82.8
MS.gene020352.t1 MTR_8g079620 40.385 104 61 1 8 111 8 110 1.37e-18 81.6
MS.gene020352.t1 MTR_8g017090 37.255 102 63 1 9 110 13 113 4.82e-18 81.3
MS.gene020352.t1 MTR_4g107450 37.143 105 65 1 4 108 6 109 1.34e-17 79.7
MS.gene020352.t1 MTR_2g100020 34.579 107 69 1 4 110 15 120 2.43e-17 79.0
MS.gene020352.t1 MTR_6g011250 38.636 88 52 2 2 88 3 89 1.81e-15 72.0
MS.gene020352.t1 MTR_6g011200 42.353 85 45 3 9 90 10 93 3.90e-15 72.4
MS.gene020352.t1 MTR_8g079580 35.294 102 64 2 8 108 8 108 8.90e-15 71.2
MS.gene020352.t1 MTR_6g011230 34.906 106 65 2 9 111 12 116 1.55e-14 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene020352.t1 AT3G58190 81.356 118 20 1 8 123 11 128 1.05e-70 215
MS.gene020352.t1 AT2G42440 74.046 131 32 1 2 130 1 131 1.03e-68 211
MS.gene020352.t1 AT2G31310 61.972 142 53 1 2 143 1 141 5.62e-60 187
MS.gene020352.t1 AT2G42430 72.897 107 29 0 4 110 11 117 5.61e-54 173
MS.gene020352.t1 AT4G00210 58.333 132 54 1 3 133 6 137 2.18e-51 166
MS.gene020352.t1 AT3G03760 71.569 102 29 0 7 108 50 151 5.03e-50 164
MS.gene020352.t1 AT5G06080 68.224 107 34 0 2 108 1 107 1.05e-49 160
MS.gene020352.t1 AT2G45420 74.000 100 26 0 11 110 40 139 2.77e-49 162
MS.gene020352.t1 AT4G00220 70.000 100 30 0 11 110 20 119 1.78e-46 154
MS.gene020352.t1 AT2G45410 60.000 115 43 2 11 122 19 133 5.15e-42 141
MS.gene020352.t1 AT3G27650 57.292 96 40 1 7 102 38 132 5.82e-33 117
MS.gene020352.t1 AT2G30130 51.695 118 53 3 2 118 1 115 1.50e-32 117
MS.gene020352.t1 AT5G63090 40.642 187 88 6 7 193 10 173 2.49e-32 116
MS.gene020352.t1 AT5G63090 40.642 187 88 6 7 193 10 173 2.49e-32 116
MS.gene020352.t1 AT5G63090 40.642 187 88 6 7 193 10 173 2.49e-32 116
MS.gene020352.t1 AT5G63090 40.642 187 88 6 7 193 10 173 2.49e-32 116
MS.gene020352.t1 AT1G07900 53.608 97 44 1 7 103 32 127 1.01e-30 112
MS.gene020352.t1 AT3G11090 50.980 102 49 1 5 106 8 108 1.14e-30 111
MS.gene020352.t1 AT1G31320 53.261 92 42 1 4 95 9 99 1.21e-30 111
MS.gene020352.t1 AT1G16530 48.305 118 58 3 7 122 13 129 2.33e-30 110
MS.gene020352.t1 AT2G28500 53.608 97 44 1 7 103 54 149 6.11e-30 111
MS.gene020352.t1 AT5G66870 51.376 109 52 1 2 110 1 108 1.54e-29 112
MS.gene020352.t1 AT2G30340 51.456 103 47 2 7 108 51 151 5.28e-29 109
MS.gene020352.t1 AT2G30340 51.456 103 47 2 7 108 52 152 5.62e-29 109
MS.gene020352.t1 AT2G23660 49.020 102 51 1 7 108 4 104 7.40e-27 105
MS.gene020352.t1 AT2G23660 49.020 102 51 1 7 108 4 104 7.40e-27 105
MS.gene020352.t1 AT2G23660 49.020 102 51 1 7 108 4 104 7.40e-27 105
MS.gene020352.t1 AT3G26660 46.316 95 50 1 9 103 6 99 3.63e-26 98.6
MS.gene020352.t1 AT1G65620 56.977 86 36 1 3 88 4 88 6.14e-26 100
MS.gene020352.t1 AT1G65620 56.977 86 36 1 3 88 4 88 6.14e-26 100
MS.gene020352.t1 AT1G65620 56.977 86 36 1 3 88 4 88 6.14e-26 100
MS.gene020352.t1 AT1G65620 56.977 86 36 1 3 88 4 88 6.14e-26 100
MS.gene020352.t1 AT1G65620 56.977 86 36 1 3 88 4 88 6.14e-26 100
MS.gene020352.t1 AT3G26620 46.316 95 50 1 9 103 6 99 6.97e-26 97.8
MS.gene020352.t1 AT2G40470 54.369 103 44 2 7 108 19 119 9.38e-26 99.8
MS.gene020352.t1 AT2G40470 54.369 103 44 2 7 108 44 144 1.32e-25 99.8
MS.gene020352.t1 AT3G50510 42.478 113 64 1 2 114 6 117 4.09e-25 97.8
MS.gene020352.t1 AT3G50510 42.478 113 64 1 2 114 6 117 4.09e-25 97.8
MS.gene020352.t1 AT3G13850 38.136 118 63 3 9 118 37 152 1.28e-18 82.4
MS.gene020352.t1 AT1G72980 36.190 105 66 1 4 108 9 112 2.33e-16 75.1
MS.gene020352.t1 AT5G35900 38.235 102 62 1 9 110 6 106 6.68e-16 73.9
MS.gene020352.t1 AT3G47870 32.381 105 70 1 4 108 32 135 2.94e-14 70.9
MS.gene020352.t1 AT1G06280 38.667 75 45 1 9 83 25 98 4.22e-13 66.2

Find 47 sgRNAs with CRISPR-Local

Find 74 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGACTTCAAGATCCAATTTA+TGG 0.151814 7.2:+13694062 MS.gene020352:CDS
TTTCCAAAGTTCTTCTCATT+AGG 0.257962 7.2:-13694678 None:intergenic
CCTTATGAATAGCTGCAAAA+TGG 0.260543 7.2:-13693944 None:intergenic
ATTAGTGGAAGAAGAGAAAT+CGG 0.262535 7.2:-13694778 None:intergenic
GCAGCTATTCATAAGGTCTT+TGG 0.287235 7.2:+13693951 MS.gene020352:CDS
TGGGCAACACATCCATAAAT+TGG 0.288880 7.2:-13694074 None:intergenic
TCAACAACACAATATTATAA+TGG 0.305675 7.2:+13694807 MS.gene020352:CDS
TTCCAAAGTTCTTCTCATTA+GGG 0.315481 7.2:-13694677 None:intergenic
CTCATGGATCTAAACCCTAT+TGG 0.344271 7.2:+13694843 MS.gene020352:CDS
ATTGGAAACTATGAAAATTC+AGG 0.345302 7.2:+13694861 MS.gene020352:CDS
TTTCCTCCTCAAGAATTTGC+AGG 0.357584 7.2:-13693868 None:intergenic
ATGAGATGCTTTCTTCCAAT+AGG 0.363922 7.2:-13694887 None:intergenic
TGAAAATTCAGGAACCCTAT+TGG 0.376897 7.2:+13694872 MS.gene020352:CDS
ACGGCCATGATGACTGGTTC+TGG 0.395558 7.2:+13693831 None:intergenic
CAACAACACAATATTATAAT+GGG 0.395664 7.2:+13694808 MS.gene020352:CDS
TTGAGGAGGAAATGTGTTAG+AGG 0.402110 7.2:+13693879 MS.gene020352:CDS
TGAGATGCTTTCTTCCAATA+GGG 0.428947 7.2:-13694886 None:intergenic
TCTTGAGGGAGAATATTAGT+AGG 0.429657 7.2:-13694702 None:intergenic
GAGATGAACAAACCTGTTGC+TGG 0.430997 7.2:-13694109 None:intergenic
CTTATGAATAGCTGCAAAAT+GGG 0.434815 7.2:-13693943 None:intergenic
AACCCTAATGAGAAGAACTT+TGG 0.435631 7.2:+13694675 MS.gene020352:CDS
AATGGGTAGCACCTTGTTCA+TGG 0.448967 7.2:-13693926 None:intergenic
ATTCTTACGGCCATGATGAC+TGG 0.455260 7.2:+13693825 None:intergenic
TGTTGTTGATGAGAGATTAG+TGG 0.463491 7.2:-13694793 None:intergenic
TCCCTCAAGATCTTCAAAGT+TGG 0.463884 7.2:+13694715 MS.gene020352:CDS
CAAATTAGCCACTTACTGAT+AGG 0.482945 7.2:-13694976 None:intergenic
ACTGGTTCTGGTTCTCCTTG+TGG 0.494488 7.2:+13693843 MS.gene020352:CDS
TGGGACTACCACTACTCTCA+TGG 0.512301 7.2:+13694827 MS.gene020352:CDS
TCTTCAAAGTTGGTTCCAGA+TGG 0.523638 7.2:+13694725 MS.gene020352:CDS
CTGTCTTTGCATGTTGTCAA+AGG 0.524030 7.2:-13694949 None:intergenic
CCTTGTTCATGGCAAAAGTA+AGG 0.524451 7.2:-13693915 None:intergenic
AACCAACTTTGAAGATCTTG+AGG 0.528680 7.2:-13694717 None:intergenic
GCTTCACAACGATCAGTCAC+AGG 0.531664 7.2:-13694008 None:intergenic
TTAGTGGAAGAAGAGAAATC+GGG 0.531706 7.2:-13694777 None:intergenic
ACCAACTTTGAAGATCTTGA+GGG 0.534056 7.2:-13694716 None:intergenic
GTGGAGCCTGCAAATTCTTG+AGG 0.534107 7.2:+13693862 MS.gene020352:CDS
AAGAAATTGAGAACACATGT+TGG 0.541417 7.2:-13694754 None:intergenic
ATTATTACATCGCTCATCAA+AGG 0.565424 7.2:-13694919 None:intergenic
AGAACCAGAACCAGTCATCA+TGG 0.567393 7.2:-13693835 None:intergenic
TGAGAGAACAAGCAGCTCAA+AGG 0.584503 7.2:+13694628 MS.gene020352:CDS
AAGAATTTGCAGGCTCCACA+AGG 0.586151 7.2:-13693858 None:intergenic
CAGTCACAGGGAGGTGTGCG+AGG 0.596818 7.2:-13693995 None:intergenic
GTTTAGATCCATGAGAGTAG+TGG 0.619212 7.2:-13694835 None:intergenic
GAGCCTGCAAATTCTTGAGG+AGG 0.637179 7.2:+13693865 MS.gene020352:CDS
CTTCACAACGATCAGTCACA+GGG 0.652040 7.2:-13694007 None:intergenic
TTGACAACATGCAAAGACAG+TGG 0.686531 7.2:+13694952 MS.gene020352:CDS
CACAACGATCAGTCACAGGG+AGG 0.754403 7.2:-13694004 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACTCTTTTTTATATATAAAC+TGG - chr7.2:13694255-13694274 None:intergenic 15.0%
!!! TTGAGTTTGTAATAAAATTT+TGG + chr7.2:13694483-13694502 MS.gene020352:intron 15.0%
!! CAACAACACAATATTATAAT+GGG + chr7.2:13694808-13694827 MS.gene020352:CDS 20.0%
!! TATATTTGATAAAATCACGA+TGG + chr7.2:13694375-13694394 MS.gene020352:intron 20.0%
!! TCAACAACACAATATTATAA+TGG + chr7.2:13694807-13694826 MS.gene020352:CDS 20.0%
!!! AATTTTCATAGTTTCCAATA+GGG - chr7.2:13694860-13694879 None:intergenic 20.0%
!!! AGGTCTTAATATTGATTTTT+TGG - chr7.2:13694287-13694306 None:intergenic 20.0%
!!! ATTAATTAACAAGAGTATCA+AGG + chr7.2:13694224-13694243 MS.gene020352:intron 20.0%
!!! TTAATTAACAAGAGTATCAA+GGG + chr7.2:13694225-13694244 MS.gene020352:intron 20.0%
! ATTGGAAACTATGAAAATTC+AGG + chr7.2:13694861-13694880 MS.gene020352:CDS 25.0%
!! GAATTTTCATAGTTTCCAAT+AGG - chr7.2:13694861-13694880 None:intergenic 25.0%
!! TATGTCATGTTGATTGTATT+AGG - chr7.2:13694307-13694326 None:intergenic 25.0%
AAGAAATTGAGAACACATGT+TGG - chr7.2:13694757-13694776 None:intergenic 30.0%
AGACTTCAAGATCCAATTTA+TGG + chr7.2:13694062-13694081 MS.gene020352:CDS 30.0%
ATTAGTGGAAGAAGAGAAAT+CGG - chr7.2:13694781-13694800 None:intergenic 30.0%
ATTATTACATCGCTCATCAA+AGG - chr7.2:13694922-13694941 None:intergenic 30.0%
CTTATGAATAGCTGCAAAAT+GGG - chr7.2:13693946-13693965 None:intergenic 30.0%
TTCCAAAGTTCTTCTCATTA+GGG - chr7.2:13694680-13694699 None:intergenic 30.0%
TTTCCAAAGTTCTTCTCATT+AGG - chr7.2:13694681-13694700 None:intergenic 30.0%
! ATTAGGGTTTTCAGAATTTG+GGG - chr7.2:13694664-13694683 None:intergenic 30.0%
! CATTAGGGTTTTCAGAATTT+GGG - chr7.2:13694665-13694684 None:intergenic 30.0%
! TCATTAGGGTTTTCAGAATT+TGG - chr7.2:13694666-13694685 None:intergenic 30.0%
AACCCTAATGAGAAGAACTT+TGG + chr7.2:13694675-13694694 MS.gene020352:CDS 35.0%
AATGTAAGCGTATACCATCT+AGG - chr7.2:13694156-13694175 None:intergenic 35.0%
ATGAGATGCTTTCTTCCAAT+AGG - chr7.2:13694890-13694909 None:intergenic 35.0%
ATGTAAGCGTATACCATCTA+GGG - chr7.2:13694155-13694174 None:intergenic 35.0%
ATTCGCGCAGTTAATACAAT+TGG + chr7.2:13694440-13694459 MS.gene020352:intron 35.0%
ATTGACTACCTACAAAGATC+AGG - chr7.2:13694586-13694605 None:intergenic 35.0%
CCTTATGAATAGCTGCAAAA+TGG - chr7.2:13693947-13693966 None:intergenic 35.0%
CTTAAACTGAAAACCCTAGA+TGG + chr7.2:13694139-13694158 MS.gene020352:intron 35.0%
TCTTGAGGGAGAATATTAGT+AGG - chr7.2:13694705-13694724 None:intergenic 35.0%
TGAAAATTCAGGAACCCTAT+TGG + chr7.2:13694872-13694891 MS.gene020352:CDS 35.0%
TGAGATGCTTTCTTCCAATA+GGG - chr7.2:13694889-13694908 None:intergenic 35.0%
TGTAAGACTTGGCACATATT+TGG + chr7.2:13694342-13694361 MS.gene020352:intron 35.0%
TTAGTGGAAGAAGAGAAATC+GGG - chr7.2:13694780-13694799 None:intergenic 35.0%
TTCTTCTTCCTGATCTTTGT+AGG + chr7.2:13694575-13694594 MS.gene020352:intron 35.0%
TTGCTGGAGTGCAAAAATAT+GGG - chr7.2:13694096-13694115 None:intergenic 35.0%
TTGGTGTATTATTGATGCAC+TGG + chr7.2:13694459-13694478 MS.gene020352:intron 35.0%
TTGTATTAACTGCGCGAATT+TGG - chr7.2:13694439-13694458 None:intergenic 35.0%
! AACCAACTTTGAAGATCTTG+AGG - chr7.2:13694720-13694739 None:intergenic 35.0%
! ACATGTTGGAATTTTCCATC+TGG - chr7.2:13694743-13694762 None:intergenic 35.0%
! ACCAACTTTGAAGATCTTGA+GGG - chr7.2:13694719-13694738 None:intergenic 35.0%
! CCATTTTGCAGCTATTCATA+AGG + chr7.2:13693944-13693963 MS.gene020352:CDS 35.0%
! TGTTGTTGATGAGAGATTAG+TGG - chr7.2:13694796-13694815 None:intergenic 35.0%
ATAAAATCACGATGGCATCG+AGG + chr7.2:13694383-13694402 MS.gene020352:intron 40.0%
CCTTGTTCATGGCAAAAGTA+AGG - chr7.2:13693918-13693937 None:intergenic 40.0%
CTCATGGATCTAAACCCTAT+TGG + chr7.2:13694843-13694862 MS.gene020352:CDS 40.0%
CTGTCTTTGCATGTTGTCAA+AGG - chr7.2:13694952-13694971 None:intergenic 40.0%
GCAGCTATTCATAAGGTCTT+TGG + chr7.2:13693951-13693970 MS.gene020352:CDS 40.0%
GTTGCTGGAGTGCAAAAATA+TGG - chr7.2:13694097-13694116 None:intergenic 40.0%
GTTTAGATCCATGAGAGTAG+TGG - chr7.2:13694838-13694857 None:intergenic 40.0%
TCCCTCAAGATCTTCAAAGT+TGG + chr7.2:13694715-13694734 MS.gene020352:CDS 40.0%
TGGGCAACACATCCATAAAT+TGG - chr7.2:13694077-13694096 None:intergenic 40.0%
TTGACAACATGCAAAGACAG+TGG + chr7.2:13694952-13694971 MS.gene020352:CDS 40.0%
TTGAGGAGGAAATGTGTTAG+AGG + chr7.2:13693879-13693898 MS.gene020352:CDS 40.0%
TTTCCTCCTCAAGAATTTGC+AGG - chr7.2:13693871-13693890 None:intergenic 40.0%
! TCTTCAAAGTTGGTTCCAGA+TGG + chr7.2:13694725-13694744 MS.gene020352:CDS 40.0%
!! CCTTACTTTTGCCATGAACA+AGG + chr7.2:13693915-13693934 MS.gene020352:CDS 40.0%
!! TATTTTTGCACTCCAGCAAC+AGG + chr7.2:13694097-13694116 MS.gene020352:CDS 40.0%
AAGAATTTGCAGGCTCCACA+AGG - chr7.2:13693861-13693880 None:intergenic 45.0%
AATGGGTAGCACCTTGTTCA+TGG - chr7.2:13693929-13693948 None:intergenic 45.0%
CCAAGTCTTACAGATCGACA+TGG - chr7.2:13694334-13694353 None:intergenic 45.0%
CCATGTCGATCTGTAAGACT+TGG + chr7.2:13694331-13694350 MS.gene020352:intron 45.0%
CTTCACAACGATCAGTCACA+GGG - chr7.2:13694010-13694029 None:intergenic 45.0%
GAGATGAACAAACCTGTTGC+TGG - chr7.2:13694112-13694131 None:intergenic 45.0%
TGAGAGAACAAGCAGCTCAA+AGG + chr7.2:13694628-13694647 MS.gene020352:CDS 45.0%
! CACTGTGTTGATCTATGCAG+TGG + chr7.2:13694530-13694549 MS.gene020352:intron 45.0%
GAGCCTGCAAATTCTTGAGG+AGG + chr7.2:13693865-13693884 MS.gene020352:CDS 50.0%
GCTTCACAACGATCAGTCAC+AGG - chr7.2:13694011-13694030 None:intergenic 50.0%
GTGGAGCCTGCAAATTCTTG+AGG + chr7.2:13693862-13693881 MS.gene020352:CDS 50.0%
TGGGACTACCACTACTCTCA+TGG + chr7.2:13694827-13694846 MS.gene020352:CDS 50.0%
!! ACTGGTTCTGGTTCTCCTTG+TGG + chr7.2:13693843-13693862 MS.gene020352:CDS 50.0%
CACAACGATCAGTCACAGGG+AGG - chr7.2:13694007-13694026 None:intergenic 55.0%
! CAGTCACAGGGAGGTGTGCG+AGG - chr7.2:13693998-13694017 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 13693837 13694986 13693837 ID=MS.gene020352
chr7.2 mRNA 13693837 13694986 13693837 ID=MS.gene020352.t1;Parent=MS.gene020352
chr7.2 exon 13693837 13694118 13693837 ID=MS.gene020352.t1.exon1;Parent=MS.gene020352.t1
chr7.2 CDS 13693837 13694118 13693837 ID=cds.MS.gene020352.t1;Parent=MS.gene020352.t1
chr7.2 exon 13694597 13694986 13694597 ID=MS.gene020352.t1.exon2;Parent=MS.gene020352.t1
chr7.2 CDS 13694597 13694986 13694597 ID=cds.MS.gene020352.t1;Parent=MS.gene020352.t1
Gene Sequence

>MS.gene020352

ATGATGACTGGTTCTGGTTCTCCTTGTGGAGCCTGCAAATTCTTGAGGAGGAAATGTGTTAGAGGTTGTGTTTTTGCACCTTACTTTTGCCATGAACAAGGTGCTACCCATTTTGCAGCTATTCATAAGGTCTTTGGTGCAAGTAATGTTTCAAAGCTCCTCGCACACCTCCCTGTGACTGATCGTTGTGAAGCTGCAGTCACAATCTCTTATGAAGCTCAAGCTAGACTTCAAGATCCAATTTATGGATGTGTTGCCCATATTTTTGCACTCCAGCAACAGGTTTGTTCATCTCTCGTGATCTTAAACTGAAAACCCTAGATGGTATACGCTTACATTTTTTTTCTTCATAATTGCAAAGAAGAATTTAAGTTAATTAATTAATTAATTAATTAACAAGAGTATCAAGGGTACTCCAGTTTATATATAAAAAAGAGTCTACAACGACCAAAAAATCAATATTAAGACCTAATACAATCAACATGACATAAACACCATGTCGATCTGTAAGACTTGGCACATATTTGGACTGTATAAATATATTTGATAAAATCACGATGGCATCGAGGTTTTGTTTAAGATTCAAAGTGTAGTTTTTGCCAAATTCGCGCAGTTAATACAATTGGTGTATTATTGATGCACTGGTTTGAGTTTGTAATAAAATTTTGGCTATTAAAGAAAAAAATACATAAGCACTGTGTTGATCTATGCAGTGGTCAATTTACTAATAAATGCATTTTCTTCTTCCTGATCTTTGTAGGTAGTCAATTTACAAGCACAGCTAGCTTTTCTGAGAGAACAAGCAGCTCAAAGGTGTCTCAATGCCCCAAATTCTGAAAACCCTAATGAGAAGAACTTTGGAAAACCTACTAATATTCTCCCTCAAGATCTTCAAAGTTGGTTCCAGATGGAAAATTCCAACATGTGTTCTCAATTTCTTCCCGATTTCTCTTCTTCCACTAATCTCTCATCAACAACACAATATTATAATGGGACTACCACTACTCTCATGGATCTAAACCCTATTGGAAACTATGAAAATTCAGGAACCCTATTGGAAGAAAGCATCTCATCATTTTCTACCTTTGATGAGCGATGTAATAATTCAATGTCCTTTGACAACATGCAAAGACAGTGGACCTATCAGTAA
Protein sequence

>MS.gene020352.t1

MMTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLAHLPVTDRCEAAVTISYEAQARLQDPIYGCVAHIFALQQQVVNLQAQLAFLREQAAQRCLNAPNSENPNEKNFGKPTNILPQDLQSWFQMENSNMCSQFLPDFSSSTNLSSTTQYYNGTTTTLMDLNPIGNYENSGTLLEESISSFSTFDERCNNSMSFDNMQRQWTYQ