Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene020574.t1 | XP_013450070.1 | 97.8 | 414 | 7 | 2 | 1 | 412 | 42 | 455 | 1.50E-152 | 549.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene020574.t1 | A0A072U4N3 | 97.8 | 414 | 7 | 2 | 1 | 412 | 42 | 455 | 1.1e-152 | 549.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene020574.t1 | TF | Trihelix |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene020574.t1 | MTR_7g103390 | 97.826 | 414 | 7 | 2 | 1 | 412 | 42 | 455 | 0.0 | 823 |
MS.gene020574.t1 | MTR_1g061640 | 62.181 | 431 | 133 | 8 | 8 | 412 | 70 | 496 | 7.64e-151 | 437 |
MS.gene020574.t1 | MTR_2g098080 | 40.318 | 377 | 175 | 8 | 32 | 399 | 80 | 415 | 9.66e-79 | 250 |
MS.gene020574.t1 | MTR_1g098920 | 39.524 | 420 | 198 | 11 | 8 | 398 | 55 | 447 | 1.73e-77 | 247 |
MS.gene020574.t1 | MTR_6g035315 | 38.200 | 411 | 211 | 9 | 8 | 396 | 53 | 442 | 1.32e-73 | 239 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene020574.t1 | AT3G10040 | 46.005 | 413 | 168 | 10 | 6 | 402 | 45 | 418 | 8.09e-101 | 306 |
MS.gene020574.t1 | AT1G76870 | 50.273 | 183 | 81 | 4 | 7 | 188 | 34 | 207 | 2.60e-55 | 187 |
MS.gene020574.t1 | AT1G76870 | 50.273 | 183 | 81 | 4 | 7 | 188 | 34 | 207 | 2.60e-55 | 187 |
MS.gene020574.t1 | AT1G76870 | 50.273 | 183 | 81 | 4 | 7 | 188 | 34 | 207 | 2.60e-55 | 187 |
MS.gene020574.t1 | AT1G21200 | 57.407 | 162 | 61 | 3 | 32 | 188 | 84 | 242 | 3.52e-55 | 189 |
MS.gene020574.t1 | AT1G21200 | 57.407 | 162 | 61 | 3 | 32 | 188 | 84 | 242 | 3.52e-55 | 189 |
Find 75 sgRNAs with CRISPR-Local
Find 90 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCAAACTTTGTTGGATACTA+TGG | 0.197558 | 7.2:-9400586 | MS.gene020574:CDS |
TCCAAAGGGATGATGGAAAA+AGG | 0.229973 | 7.2:-9400720 | MS.gene020574:CDS |
TGGTTTGTTGTTGTTGGTTT+TGG | 0.247414 | 7.2:+9400986 | None:intergenic |
TGAAAATGAAAGGAAGAGTT+TGG | 0.281655 | 7.2:-9399917 | MS.gene020574:CDS |
AAAAGAGTTAATGATATTCT+TGG | 0.286176 | 7.2:-9400639 | MS.gene020574:CDS |
TCAAATGGGGTAGGGAGTTT+AGG | 0.306322 | 7.2:-9400354 | MS.gene020574:CDS |
GATGAAGACGAACCATGTTT+TGG | 0.321361 | 7.2:-9400939 | MS.gene020574:CDS |
AAGAAGAGGGTGGTGCAATT+AGG | 0.323802 | 7.2:-9400048 | MS.gene020574:CDS |
CAATGTTTGCATTCATCAAA+TGG | 0.340659 | 7.2:-9400369 | MS.gene020574:CDS |
TCAGGAGAAGGTGGTGGTTA+TGG | 0.365147 | 7.2:-9400231 | MS.gene020574:CDS |
AGCTTCTTCTTTCAACTTTG+CGG | 0.379123 | 7.2:+9400557 | None:intergenic |
AATGTTTGCATTCATCAAAT+GGG | 0.387098 | 7.2:-9400368 | MS.gene020574:CDS |
AATGGTAAGACTCTTAATAA+TGG | 0.395318 | 7.2:-9400844 | MS.gene020574:CDS |
TGTTGAAAATCAAACTTTGT+TGG | 0.398526 | 7.2:-9400595 | MS.gene020574:CDS |
GAGTTTGGAGATTGATAGAA+TGG | 0.398897 | 7.2:-9399902 | MS.gene020574:CDS |
ATGAAAATATTGATCACTTA+AGG | 0.402159 | 7.2:-9400188 | MS.gene020574:CDS |
TTGTTGTGGTTTGTTGTTGT+TGG | 0.407241 | 7.2:+9400980 | None:intergenic |
TTGAAACTGAAAGGTAGAAA+TGG | 0.413834 | 7.2:-9400327 | MS.gene020574:CDS |
AATGGTTTGTTACAAAAGAA+AGG | 0.427323 | 7.2:-9400759 | MS.gene020574:CDS |
TAGTAACAAAGAAAGGGAAA+TGG | 0.428604 | 7.2:-9399953 | MS.gene020574:CDS |
ATGAAGACGAAGACGATGAA+TGG | 0.431143 | 7.2:-9400284 | MS.gene020574:CDS |
GTTAATGATATTCTTGGTAA+AGG | 0.448596 | 7.2:-9400633 | MS.gene020574:CDS |
AGAACAGGTAAACTATCATA+TGG | 0.455868 | 7.2:-9400022 | MS.gene020574:CDS |
ATCAGTTTCCAAAGGGATGA+TGG | 0.456043 | 7.2:-9400727 | MS.gene020574:CDS |
GAAGAGGAAGAAGAAGAATC+AGG | 0.456394 | 7.2:-9400249 | MS.gene020574:CDS |
TGTTACAAAAGAAAGGGAAA+TGG | 0.458567 | 7.2:-9400752 | MS.gene020574:CDS |
CACCATGGCATAGAATGAAA+TGG | 0.467516 | 7.2:-9400875 | MS.gene020574:CDS |
GTTGCAAATTGTTGTTTCCA+TGG | 0.468486 | 7.2:+9400469 | None:intergenic |
TGCTGTTGTTGCTGTTGTTG+TGG | 0.468978 | 7.2:+9400405 | None:intergenic |
ATAATGGCTGTTTATTACAT+TGG | 0.475736 | 7.2:-9400828 | MS.gene020574:CDS |
AAGATGGAGTGAAGAGTTGT+TGG | 0.482165 | 7.2:-9400089 | MS.gene020574:CDS |
TATCATAACAGTTGTGGCCA+TGG | 0.484474 | 7.2:-9400486 | MS.gene020574:CDS |
TGGAGGAGGAGAAGATGAAG+AGG | 0.485154 | 7.2:-9400307 | MS.gene020574:CDS |
AATTTAGTAGTAACAAAGAA+AGG | 0.489528 | 7.2:-9399960 | MS.gene020574:CDS |
ATGGTTTGTTACAAAAGAAA+GGG | 0.489534 | 7.2:-9400758 | MS.gene020574:CDS |
TGATTGATGAGGTTGATCAT+AGG | 0.498163 | 7.2:+9401034 | None:intergenic |
GTCCATTTCATTCTATGCCA+TGG | 0.498446 | 7.2:+9400873 | None:intergenic |
GGTGCAATTAGGAGAAGAAC+AGG | 0.499399 | 7.2:-9400037 | MS.gene020574:CDS |
AGTTCAATGATTTGAACAAA+AGG | 0.501403 | 7.2:-9400665 | MS.gene020574:CDS |
TGAAGACGAAGACGATGAAT+GGG | 0.509736 | 7.2:-9400283 | MS.gene020574:CDS |
AAAAGCAATGGATGAAGAAG+AGG | 0.518548 | 7.2:-9400062 | MS.gene020574:CDS |
GAAGAATCAGGAGAAGGTGG+TGG | 0.520051 | 7.2:-9400237 | MS.gene020574:CDS |
AGGTTGATGTTGATTTGTTG+TGG | 0.522948 | 7.2:+9400966 | None:intergenic |
TGCATTCATCAAATGGGGTA+GGG | 0.525561 | 7.2:-9400362 | MS.gene020574:CDS |
GAAGAAGAATCAGGAGAAGG+TGG | 0.525982 | 7.2:-9400240 | MS.gene020574:CDS |
AGGTGGTGGTTATGGTTCAA+AGG | 0.527876 | 7.2:-9400223 | MS.gene020574:CDS |
TTAGGAATGTTGAAACTGAA+AGG | 0.528480 | 7.2:-9400336 | MS.gene020574:CDS |
ATTTAGTAGTAACAAAGAAA+GGG | 0.534556 | 7.2:-9399959 | MS.gene020574:CDS |
GGTGGTGGTTATGGTTCAAA+GGG | 0.537283 | 7.2:-9400222 | MS.gene020574:CDS |
TTGCATTCATCAAATGGGGT+AGG | 0.539537 | 7.2:-9400363 | MS.gene020574:CDS |
GTTTCATCTGCTCCAAAACA+TGG | 0.550664 | 7.2:+9400927 | None:intergenic |
ATGGGAGGATGATTCTGAAG+AGG | 0.551198 | 7.2:-9400265 | MS.gene020574:CDS |
CTGAAAGGTAGAAATGGAGG+AGG | 0.556127 | 7.2:-9400321 | MS.gene020574:CDS |
TATTACATTGGTGATGAAGC+TGG | 0.558817 | 7.2:-9400816 | MS.gene020574:CDS |
AATGGAAATCAGTTTCCAAA+GGG | 0.568552 | 7.2:-9400734 | MS.gene020574:CDS |
TGTGGATGATGATGTTGCAG+TGG | 0.570238 | 7.2:+9400423 | None:intergenic |
AACTGTTGCATCACTTGTGA+TGG | 0.574352 | 7.2:+9400138 | None:intergenic |
AGATGGAGTGAAGAGTTGTT+GGG | 0.577842 | 7.2:-9400088 | MS.gene020574:CDS |
GAAGAAGAAGAATCAGGAGA+AGG | 0.578759 | 7.2:-9400243 | MS.gene020574:CDS |
CCTTGTTTGATTGATTGATG+AGG | 0.589884 | 7.2:+9401023 | None:intergenic |
GTGATGAGTGTGTTGCAAGA+TGG | 0.590136 | 7.2:-9400105 | MS.gene020574:CDS |
AAAGCAATGGATGAAGAAGA+GGG | 0.598249 | 7.2:-9400061 | MS.gene020574:CDS |
CAGTGGTTGAGTCTCAGTTG+AGG | 0.599148 | 7.2:+9400440 | None:intergenic |
AAACTGAAAGGTAGAAATGG+AGG | 0.600866 | 7.2:-9400324 | MS.gene020574:CDS |
CCTCATCAATCAATCAAACA+AGG | 0.605701 | 7.2:-9401023 | MS.gene020574:CDS |
AATGAAATGGACAGATACAA+TGG | 0.606746 | 7.2:-9400862 | MS.gene020574:CDS |
TTTGGAGCAGATGAAACCTC+TGG | 0.607202 | 7.2:-9400921 | MS.gene020574:CDS |
AAATGGAAATCAGTTTCCAA+AGG | 0.612879 | 7.2:-9400735 | MS.gene020574:CDS |
AACTTGTCTTCACATTGTTG+AGG | 0.613435 | 7.2:+9400684 | None:intergenic |
ATGTTTGCATTCATCAAATG+GGG | 0.639039 | 7.2:-9400367 | MS.gene020574:CDS |
TGTGCTTATCATAACAGTTG+TGG | 0.669194 | 7.2:-9400492 | MS.gene020574:CDS |
AGACGAAGACGATGAATGGG+AGG | 0.672078 | 7.2:-9400280 | MS.gene020574:CDS |
GGAGCAGATGAAACCTCTGG+TGG | 0.717638 | 7.2:-9400918 | MS.gene020574:CDS |
ATGGTTCGTCTTCATCACTG+AGG | 0.747243 | 7.2:+9400946 | None:intergenic |
GCAATGGATGAAGAAGAGGG+TGG | 0.776790 | 7.2:-9400058 | MS.gene020574:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAGAGTTAATGATATTCT+TGG | - | chr7.2:9400227-9400246 | MS.gene020574:CDS | 20.0% |
!! | AATTTAGTAGTAACAAAGAA+AGG | - | chr7.2:9400906-9400925 | MS.gene020574:CDS | 20.0% |
!! | ATGAAAATATTGATCACTTA+AGG | - | chr7.2:9400678-9400697 | MS.gene020574:CDS | 20.0% |
!! | ATTTAGTAGTAACAAAGAAA+GGG | - | chr7.2:9400907-9400926 | MS.gene020574:CDS | 20.0% |
! | AATGGTAAGACTCTTAATAA+TGG | - | chr7.2:9400022-9400041 | MS.gene020574:CDS | 25.0% |
! | AATGTTTGCATTCATCAAAT+GGG | - | chr7.2:9400498-9400517 | MS.gene020574:CDS | 25.0% |
! | AGTTCAATGATTTGAACAAA+AGG | - | chr7.2:9400201-9400220 | MS.gene020574:CDS | 25.0% |
! | ATAATGGCTGTTTATTACAT+TGG | - | chr7.2:9400038-9400057 | MS.gene020574:CDS | 25.0% |
! | GACAAAAACTTGAAAATGAA+AGG | - | chr7.2:9400939-9400958 | MS.gene020574:CDS | 25.0% |
! | GTTAATGATATTCTTGGTAA+AGG | - | chr7.2:9400233-9400252 | MS.gene020574:CDS | 25.0% |
! | TGAAAAACAAAGGTTGAAAT+GGG | - | chr7.2:9400880-9400899 | MS.gene020574:CDS | 25.0% |
! | TGTTGAAAATCAAACTTTGT+TGG | - | chr7.2:9400271-9400290 | MS.gene020574:CDS | 25.0% |
! | TTGAAAAACAAAGGTTGAAA+TGG | - | chr7.2:9400879-9400898 | MS.gene020574:CDS | 25.0% |
!! | CATTTGAGATTGAAAAACAA+AGG | - | chr7.2:9400870-9400889 | MS.gene020574:CDS | 25.0% |
!!! | AATGGTTTGTTACAAAAGAA+AGG | - | chr7.2:9400107-9400126 | MS.gene020574:CDS | 25.0% |
!!! | ATGGTTTGTTACAAAAGAAA+GGG | - | chr7.2:9400108-9400127 | MS.gene020574:CDS | 25.0% |
AAATGGAAATCAGTTTCCAA+AGG | - | chr7.2:9400131-9400150 | MS.gene020574:CDS | 30.0% | |
AATGAAATGGACAGATACAA+TGG | - | chr7.2:9400004-9400023 | MS.gene020574:CDS | 30.0% | |
AATGGAAATCAGTTTCCAAA+GGG | - | chr7.2:9400132-9400151 | MS.gene020574:CDS | 30.0% | |
AGAACAGGTAAACTATCATA+TGG | - | chr7.2:9400844-9400863 | MS.gene020574:CDS | 30.0% | |
ATGTTTGCATTCATCAAATG+GGG | - | chr7.2:9400499-9400518 | MS.gene020574:CDS | 30.0% | |
CAATGTTTGCATTCATCAAA+TGG | - | chr7.2:9400497-9400516 | MS.gene020574:CDS | 30.0% | |
GCTGATAAAAAGAAAGCTAA+TGG | - | chr7.2:9400089-9400108 | MS.gene020574:CDS | 30.0% | |
TAGTAACAAAGAAAGGGAAA+TGG | - | chr7.2:9400913-9400932 | MS.gene020574:CDS | 30.0% | |
TCAAACTTTGTTGGATACTA+TGG | - | chr7.2:9400280-9400299 | MS.gene020574:CDS | 30.0% | |
TGAAAATGAAAGGAAGAGTT+TGG | - | chr7.2:9400949-9400968 | MS.gene020574:CDS | 30.0% | |
TGTTACAAAAGAAAGGGAAA+TGG | - | chr7.2:9400114-9400133 | MS.gene020574:CDS | 30.0% | |
TTAGGAATGTTGAAACTGAA+AGG | - | chr7.2:9400530-9400549 | MS.gene020574:CDS | 30.0% | |
TTGAAACTGAAAGGTAGAAA+TGG | - | chr7.2:9400539-9400558 | MS.gene020574:CDS | 30.0% | |
! | ATGGTGATCCTTTTCTTTTT+GGG | + | chr7.2:9399977-9399996 | None:intergenic | 30.0% |
!!! | TGTTGGTTTTGGATGAATAA+GGG | + | chr7.2:9399872-9399891 | None:intergenic | 30.0% |
!!! | TTGTTGGTTTTGGATGAATA+AGG | + | chr7.2:9399873-9399892 | None:intergenic | 30.0% |
AAAAGCAATGGATGAAGAAG+AGG | - | chr7.2:9400804-9400823 | MS.gene020574:CDS | 35.0% | |
AAACTGAAAGGTAGAAATGG+AGG | - | chr7.2:9400542-9400561 | MS.gene020574:CDS | 35.0% | |
AAAGCAATGGATGAAGAAGA+GGG | - | chr7.2:9400805-9400824 | MS.gene020574:CDS | 35.0% | |
AACTTGTCTTCACATTGTTG+AGG | + | chr7.2:9400185-9400204 | None:intergenic | 35.0% | |
AGCTTCTTCTTTCAACTTTG+CGG | + | chr7.2:9400312-9400331 | None:intergenic | 35.0% | |
CAAAAAGAAAAGGATCACCA+TGG | - | chr7.2:9399976-9399995 | MS.gene020574:CDS | 35.0% | |
CCTCATCAATCAATCAAACA+AGG | - | chr7.2:9399843-9399862 | MS.gene020574:CDS | 35.0% | |
GAGTTTGGAGATTGATAGAA+TGG | - | chr7.2:9400964-9400983 | MS.gene020574:CDS | 35.0% | |
TGTGCTTATCATAACAGTTG+TGG | - | chr7.2:9400374-9400393 | MS.gene020574:CDS | 35.0% | |
! | CATGGTGATCCTTTTCTTTT+TGG | + | chr7.2:9399978-9399997 | None:intergenic | 35.0% |
! | CCTTGTTTGATTGATTGATG+AGG | + | chr7.2:9399846-9399865 | None:intergenic | 35.0% |
! | TGATTGATGAGGTTGATCAT+AGG | + | chr7.2:9399835-9399854 | None:intergenic | 35.0% |
!! | AGGTTGATGTTGATTTGTTG+TGG | + | chr7.2:9399903-9399922 | None:intergenic | 35.0% |
!! | GTTGCAAATTGTTGTTTCCA+TGG | + | chr7.2:9400400-9400419 | None:intergenic | 35.0% |
!! | TATTACATTGGTGATGAAGC+TGG | - | chr7.2:9400050-9400069 | MS.gene020574:CDS | 35.0% |
!! | TTGTTGTGGTTTGTTGTTGT+TGG | + | chr7.2:9399889-9399908 | None:intergenic | 35.0% |
!!! | TGGTTTGTTGTTGTTGGTTT+TGG | + | chr7.2:9399883-9399902 | None:intergenic | 35.0% |
AACTGTTGCATCACTTGTGA+TGG | + | chr7.2:9400731-9400750 | None:intergenic | 40.0% | |
AAGATGGAGTGAAGAGTTGT+TGG | - | chr7.2:9400777-9400796 | MS.gene020574:CDS | 40.0% | |
AGATGGAGTGAAGAGTTGTT+GGG | - | chr7.2:9400778-9400797 | MS.gene020574:CDS | 40.0% | |
ATCAGTTTCCAAAGGGATGA+TGG | - | chr7.2:9400139-9400158 | MS.gene020574:CDS | 40.0% | |
ATGAAGACGAAGACGATGAA+TGG | - | chr7.2:9400582-9400601 | MS.gene020574:CDS | 40.0% | |
CACCATGGCATAGAATGAAA+TGG | - | chr7.2:9399991-9400010 | MS.gene020574:CDS | 40.0% | |
GAAGAAGAAGAATCAGGAGA+AGG | - | chr7.2:9400623-9400642 | MS.gene020574:CDS | 40.0% | |
GAAGAGGAAGAAGAAGAATC+AGG | - | chr7.2:9400617-9400636 | MS.gene020574:CDS | 40.0% | |
GTCCATTTCATTCTATGCCA+TGG | + | chr7.2:9399996-9400015 | None:intergenic | 40.0% | |
GTTGTTGGGAGAAAAAGCAA+TGG | - | chr7.2:9400792-9400811 | MS.gene020574:CDS | 40.0% | |
GTTTCATCTGCTCCAAAACA+TGG | + | chr7.2:9399942-9399961 | None:intergenic | 40.0% | |
TATCATAACAGTTGTGGCCA+TGG | - | chr7.2:9400380-9400399 | MS.gene020574:CDS | 40.0% | |
TGAAGACGAAGACGATGAAT+GGG | - | chr7.2:9400583-9400602 | MS.gene020574:CDS | 40.0% | |
TGCATTCATCAAATGGGGTA+GGG | - | chr7.2:9400504-9400523 | MS.gene020574:CDS | 40.0% | |
TTGCATTCATCAAATGGGGT+AGG | - | chr7.2:9400503-9400522 | MS.gene020574:CDS | 40.0% | |
! | GATGAAGACGAACCATGTTT+TGG | - | chr7.2:9399927-9399946 | MS.gene020574:CDS | 40.0% |
!! | CCAAAGGGATGATGGAAAAA+GGG | - | chr7.2:9400147-9400166 | MS.gene020574:CDS | 40.0% |
!! | TCCAAAGGGATGATGGAAAA+AGG | - | chr7.2:9400146-9400165 | MS.gene020574:CDS | 40.0% |
AAGAAGAGGGTGGTGCAATT+AGG | - | chr7.2:9400818-9400837 | MS.gene020574:CDS | 45.0% | |
ATGGTTCGTCTTCATCACTG+AGG | + | chr7.2:9399923-9399942 | None:intergenic | 45.0% | |
CTGAAAGGTAGAAATGGAGG+AGG | - | chr7.2:9400545-9400564 | MS.gene020574:CDS | 45.0% | |
GAAGAAGAATCAGGAGAAGG+TGG | - | chr7.2:9400626-9400645 | MS.gene020574:CDS | 45.0% | |
GGTGCAATTAGGAGAAGAAC+AGG | - | chr7.2:9400829-9400848 | MS.gene020574:CDS | 45.0% | |
GGTGGTGACCCAAAAAGAAA+AGG | - | chr7.2:9399966-9399985 | MS.gene020574:CDS | 45.0% | |
GTGATGAGTGTGTTGCAAGA+TGG | - | chr7.2:9400761-9400780 | MS.gene020574:CDS | 45.0% | |
TCAAATGGGGTAGGGAGTTT+AGG | - | chr7.2:9400512-9400531 | MS.gene020574:CDS | 45.0% | |
! | AGGTGGTGGTTATGGTTCAA+AGG | - | chr7.2:9400643-9400662 | MS.gene020574:CDS | 45.0% |
! | ATGGGAGGATGATTCTGAAG+AGG | - | chr7.2:9400601-9400620 | MS.gene020574:CDS | 45.0% |
! | CCCTTTTTCCATCATCCCTT+TGG | + | chr7.2:9400150-9400169 | None:intergenic | 45.0% |
! | GGTGGTGGTTATGGTTCAAA+GGG | - | chr7.2:9400644-9400663 | MS.gene020574:CDS | 45.0% |
! | TGCTGTTGTTGCTGTTGTTG+TGG | + | chr7.2:9400464-9400483 | None:intergenic | 45.0% |
! | TGTGGATGATGATGTTGCAG+TGG | + | chr7.2:9400446-9400465 | None:intergenic | 45.0% |
! | TTTGGAGCAGATGAAACCTC+TGG | - | chr7.2:9399945-9399964 | MS.gene020574:CDS | 45.0% |
AGACGAAGACGATGAATGGG+AGG | - | chr7.2:9400586-9400605 | MS.gene020574:CDS | 50.0% | |
CAGTGGTTGAGTCTCAGTTG+AGG | + | chr7.2:9400429-9400448 | None:intergenic | 50.0% | |
GAAGAATCAGGAGAAGGTGG+TGG | - | chr7.2:9400629-9400648 | MS.gene020574:CDS | 50.0% | |
GCAATGGATGAAGAAGAGGG+TGG | - | chr7.2:9400808-9400827 | MS.gene020574:CDS | 50.0% | |
TGGAGGAGGAGAAGATGAAG+AGG | - | chr7.2:9400559-9400578 | MS.gene020574:CDS | 50.0% | |
! | TCAGGAGAAGGTGGTGGTTA+TGG | - | chr7.2:9400635-9400654 | MS.gene020574:CDS | 50.0% |
!!! | TCTTTTTGGGTCACCACCAG+AGG | + | chr7.2:9399964-9399983 | None:intergenic | 50.0% |
GGAGCAGATGAAACCTCTGG+TGG | - | chr7.2:9399948-9399967 | MS.gene020574:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 9399825 | 9401063 | 9399825 | ID=MS.gene020574 |
chr7.2 | mRNA | 9399825 | 9401063 | 9399825 | ID=MS.gene020574.t1;Parent=MS.gene020574 |
chr7.2 | exon | 9399825 | 9401063 | 9399825 | ID=MS.gene020574.t1.exon1;Parent=MS.gene020574.t1 |
chr7.2 | CDS | 9399825 | 9401063 | 9399825 | ID=cds.MS.gene020574.t1;Parent=MS.gene020574.t1 |
Gene Sequence |
Protein sequence |