AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene020647

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene020647.t1 MTR_7g102110 86.777 242 18 2 13 254 43 270 3.36e-130 369
MS.gene020647.t1 MTR_4g057635 80.263 76 15 0 15 90 45 120 5.89e-42 146
MS.gene020647.t1 MTR_5g014990 62.000 100 32 1 15 114 45 138 3.99e-39 138
MS.gene020647.t1 MTR_2g095520 40.072 277 118 9 15 256 45 308 6.59e-39 138
MS.gene020647.t1 MTR_1g017000 59.292 113 37 2 13 125 43 146 1.09e-38 135
MS.gene020647.t1 MTR_1g017140 72.840 81 20 1 9 89 41 119 1.63e-38 137
MS.gene020647.t1 MTR_3g103570 73.333 75 20 0 15 89 45 119 1.08e-37 135
MS.gene020647.t1 MTR_6g090405 74.074 81 21 0 15 95 45 125 2.26e-37 132
MS.gene020647.t1 MTR_4g097570 76.812 69 16 0 12 80 43 111 1.54e-35 128
MS.gene020647.t1 MTR_4g128670 77.612 67 15 0 15 81 45 111 2.98e-34 126
MS.gene020647.t1 MTR_4g097570 75.000 68 17 0 13 80 43 110 4.96e-34 124
MS.gene020647.t1 MTR_3g461490 65.385 78 27 0 13 90 42 119 5.45e-32 120
MS.gene020647.t1 MTR_6g009430 65.385 78 27 0 13 90 42 119 8.33e-32 119
MS.gene020647.t1 MTR_4g478180 48.718 117 56 3 13 127 43 157 2.10e-31 119
MS.gene020647.t1 MTR_5g007370 54.000 100 43 2 13 110 42 140 1.33e-30 115
MS.gene020647.t1 MTR_0251s0050 48.624 109 51 1 13 116 43 151 5.50e-30 113
MS.gene020647.t1 MTR_1g112760 60.526 76 30 0 13 88 43 118 6.25e-30 112
MS.gene020647.t1 MTR_5g029840 57.692 78 33 0 13 90 42 119 1.33e-29 114
MS.gene020647.t1 MTR_8g031360 60.256 78 31 0 13 90 44 121 1.91e-29 112
MS.gene020647.t1 MTR_3g074520 59.494 79 32 0 12 90 41 119 2.10e-29 113
MS.gene020647.t1 MTR_7g076740 57.692 78 33 0 13 90 43 120 2.55e-29 112
MS.gene020647.t1 MTR_7g011170 52.830 106 47 2 15 120 44 146 3.14e-29 112
MS.gene020647.t1 MTR_5g079670 57.692 78 33 0 13 90 41 118 6.23e-29 109
MS.gene020647.t1 MTR_3g077110 59.211 76 31 0 13 88 42 117 6.33e-29 112
MS.gene020647.t1 MTR_4g100720 59.302 86 29 2 16 101 46 125 1.00e-28 107
MS.gene020647.t1 MTR_8g095390 60.000 75 30 0 13 87 42 116 1.25e-28 110
MS.gene020647.t1 MTR_4g073420 55.263 76 34 0 13 88 42 117 1.39e-28 110
MS.gene020647.t1 MTR_4g102380 57.692 78 33 0 13 90 42 119 1.55e-28 109
MS.gene020647.t1 MTR_0008s0390 59.211 76 31 0 13 88 43 118 1.77e-28 109
MS.gene020647.t1 MTR_6g012690 52.336 107 49 2 15 120 44 149 1.85e-28 111
MS.gene020647.t1 MTR_5g078140 39.610 154 87 3 13 165 42 190 2.51e-28 110
MS.gene020647.t1 MTR_4g125520 46.667 105 56 0 13 117 42 146 2.84e-28 109
MS.gene020647.t1 MTR_1g100653 60.000 75 30 0 13 87 42 116 3.48e-28 109
MS.gene020647.t1 MTR_3g097450 57.333 75 32 0 13 87 42 116 3.57e-28 109
MS.gene020647.t1 MTR_7g117730 60.000 75 30 0 13 87 42 116 4.01e-28 108
MS.gene020647.t1 MTR_1g076150 59.494 79 32 0 13 91 42 120 4.19e-28 108
MS.gene020647.t1 MTR_0197s0010 61.039 77 30 0 14 90 32 108 4.69e-28 107
MS.gene020647.t1 MTR_4g485530 47.170 106 48 2 15 115 44 146 5.13e-28 106
MS.gene020647.t1 MTR_8g098860 60.274 73 29 0 15 87 44 116 5.94e-28 109
MS.gene020647.t1 MTR_0063s0090 52.381 84 40 0 13 96 42 125 6.57e-28 107
MS.gene020647.t1 MTR_3g065440 60.256 78 31 0 13 90 42 119 6.71e-28 108
MS.gene020647.t1 MTR_2g011660 57.692 78 33 0 13 90 43 120 8.49e-28 109
MS.gene020647.t1 MTR_8g042410 45.098 102 51 1 12 113 66 162 1.10e-27 111
MS.gene020647.t1 MTR_7g115650 60.000 75 30 0 13 87 42 116 1.14e-27 105
MS.gene020647.t1 MTR_4g091490 57.692 78 33 0 13 90 43 120 1.19e-27 108
MS.gene020647.t1 MTR_3g039990 61.039 77 30 0 17 93 47 123 1.24e-27 108
MS.gene020647.t1 MTR_1g085040 60.000 75 30 0 13 87 42 116 1.35e-27 109
MS.gene020647.t1 MTR_8g017540 41.333 150 64 4 13 151 88 224 1.74e-27 109
MS.gene020647.t1 MTR_4g082230 55.682 88 38 1 15 102 44 130 1.78e-27 109
MS.gene020647.t1 MTR_8g017500 57.143 84 32 1 13 96 42 121 2.00e-27 108
MS.gene020647.t1 MTR_8g027345 60.000 75 30 0 13 87 42 116 2.12e-27 107
MS.gene020647.t1 MTR_4g082290 55.682 88 38 1 15 102 44 130 2.21e-27 108
MS.gene020647.t1 MTR_0008s0470 56.579 76 33 0 13 88 43 118 2.53e-27 107
MS.gene020647.t1 MTR_4g065017 31.405 242 122 6 15 248 49 254 2.72e-27 107
MS.gene020647.t1 MTR_1g043080 46.154 104 56 0 13 116 42 145 3.34e-27 105
MS.gene020647.t1 MTR_0140s0030 63.014 73 27 0 15 87 45 117 3.35e-27 107
MS.gene020647.t1 MTR_0489s0020 63.014 73 27 0 15 87 45 117 3.35e-27 107
MS.gene020647.t1 MTR_3g083540 55.263 76 34 0 13 88 71 146 3.43e-27 107
MS.gene020647.t1 MTR_1g062940 50.575 87 43 0 13 99 36 122 3.61e-27 104
MS.gene020647.t1 MTR_7g096930 53.659 82 38 0 13 94 42 123 3.93e-27 106
MS.gene020647.t1 MTR_8g017440 59.211 76 31 0 12 87 41 116 4.45e-27 107
MS.gene020647.t1 MTR_3g052450 57.333 75 32 0 12 86 69 143 4.47e-27 109
MS.gene020647.t1 MTR_2g034790 48.148 108 55 1 13 119 42 149 5.00e-27 107
MS.gene020647.t1 MTR_2g099740 56.410 78 34 0 12 89 41 118 6.66e-27 107
MS.gene020647.t1 MTR_2g089450 56.579 76 33 0 13 88 42 117 7.87e-27 104
MS.gene020647.t1 MTR_4g105130 56.579 76 33 0 13 88 42 117 8.19e-27 107
MS.gene020647.t1 MTR_3g011610 46.392 97 47 1 12 108 66 157 1.08e-26 108
MS.gene020647.t1 MTR_1g043050 55.294 85 36 1 13 95 42 126 1.26e-26 104
MS.gene020647.t1 MTR_2g089420 52.632 76 36 0 13 88 41 116 1.37e-26 107
MS.gene020647.t1 MTR_1g085640 58.667 75 31 0 13 87 42 116 1.81e-26 106
MS.gene020647.t1 MTR_8g017340 57.692 78 33 0 12 89 42 119 1.92e-26 107
MS.gene020647.t1 MTR_2g089620 56.579 76 33 0 13 88 42 117 2.41e-26 105
MS.gene020647.t1 MTR_7g087130 49.180 122 49 3 17 138 46 154 2.87e-26 105
MS.gene020647.t1 MTR_4g121460 44.231 104 58 0 13 116 42 145 2.97e-26 105
MS.gene020647.t1 MTR_7g110830 58.667 75 31 0 13 87 42 116 3.21e-26 105
MS.gene020647.t1 MTR_3g052430 56.000 75 33 0 12 86 70 144 3.43e-26 107
MS.gene020647.t1 MTR_2g064160 49.474 95 42 1 13 107 41 129 3.55e-26 104
MS.gene020647.t1 MTR_8g017390 56.410 78 34 0 12 89 42 119 3.90e-26 106
MS.gene020647.t1 MTR_7g010210 63.380 71 26 0 17 87 46 116 5.18e-26 103
MS.gene020647.t1 MTR_8g017350 56.410 78 34 0 12 89 42 119 5.56e-26 106
MS.gene020647.t1 MTR_7g010210 61.644 73 28 0 15 87 44 116 6.21e-26 102
MS.gene020647.t1 MTR_3g028740 56.164 73 32 0 15 87 54 126 6.87e-26 103
MS.gene020647.t1 MTR_2g097910 51.852 81 39 0 15 95 52 132 7.80e-26 103
MS.gene020647.t1 MTR_6g006030 51.220 82 40 0 13 94 44 125 9.67e-26 100
MS.gene020647.t1 MTR_8g020490 58.904 73 30 0 15 87 40 112 1.04e-25 101
MS.gene020647.t1 MTR_5g010020 61.538 65 25 0 17 81 46 110 1.79e-25 102
MS.gene020647.t1 MTR_0008s0280 52.055 73 35 0 13 85 42 114 6.27e-25 99.4
MS.gene020647.t1 MTR_7g035075 51.765 85 41 0 13 97 44 128 6.47e-25 98.6
MS.gene020647.t1 MTR_1g045610 58.108 74 31 0 13 86 51 124 6.77e-25 99.8
MS.gene020647.t1 MTR_1g100667 56.164 73 32 0 15 87 45 117 8.07e-25 99.8
MS.gene020647.t1 MTR_1g073170 58.108 74 31 0 13 86 50 123 8.35e-25 99.4
MS.gene020647.t1 MTR_4g063100 53.425 73 34 0 14 86 9 81 1.16e-24 98.2
MS.gene020647.t1 MTR_0193s0090 41.593 113 62 1 17 129 41 149 1.33e-24 97.8
MS.gene020647.t1 MTR_7g017260 46.018 113 57 1 8 116 52 164 1.52e-24 99.4
MS.gene020647.t1 MTR_5g079220 39.053 169 79 5 15 167 53 213 1.85e-24 99.0
MS.gene020647.t1 MTR_7g111290 60.870 69 27 0 12 80 41 109 1.95e-24 100
MS.gene020647.t1 MTR_6g012180 64.615 65 23 0 17 81 46 110 2.49e-24 99.4
MS.gene020647.t1 MTR_1g110460 38.125 160 92 3 13 168 56 212 3.48e-24 99.0
MS.gene020647.t1 MTR_4g063100 52.703 74 35 0 13 86 37 110 3.67e-24 97.8
MS.gene020647.t1 MTR_0001s0360 44.643 112 58 1 17 124 41 152 3.75e-24 97.8
MS.gene020647.t1 MTR_5g079290 56.000 75 33 0 15 89 49 123 4.05e-24 97.8
MS.gene020647.t1 MTR_2g096380 53.425 73 34 0 14 86 18 90 4.12e-24 96.7
MS.gene020647.t1 MTR_7g111290 59.701 67 27 0 14 80 1 67 1.14e-23 98.2
MS.gene020647.t1 MTR_5g042030 55.405 74 33 0 17 90 41 114 1.27e-23 97.1
MS.gene020647.t1 MTR_6g055910 58.571 70 29 0 17 86 19 88 1.43e-23 96.3
MS.gene020647.t1 MTR_2g096380 52.703 74 35 0 13 86 36 109 1.58e-23 95.5
MS.gene020647.t1 MTR_5g078930 49.451 91 46 0 13 103 39 129 2.29e-23 94.7
MS.gene020647.t1 MTR_5g078910 56.164 73 32 0 17 89 41 113 2.49e-23 96.3
MS.gene020647.t1 MTR_8g060940 62.687 67 25 0 17 83 41 107 2.62e-23 95.1
MS.gene020647.t1 MTR_6g055910 58.571 70 29 0 17 86 48 117 4.77e-23 95.5
MS.gene020647.t1 MTR_2g088170 46.000 100 49 1 12 111 58 152 5.38e-23 97.4
MS.gene020647.t1 MTR_5g079120 45.614 114 48 2 13 116 91 200 7.93e-23 95.1
MS.gene020647.t1 MTR_2g067420 56.522 69 30 0 13 81 44 112 1.28e-22 95.1
MS.gene020647.t1 MTR_5g078950 60.294 68 27 0 17 84 41 108 1.60e-22 93.6
MS.gene020647.t1 MTR_5g078800 54.545 77 35 0 13 89 37 113 1.97e-22 93.2
MS.gene020647.t1 MTR_5g078860 53.247 77 36 0 13 89 37 113 1.99e-22 94.0
MS.gene020647.t1 MTR_1g021230 47.436 78 41 0 12 89 86 163 4.47e-22 94.7
MS.gene020647.t1 MTR_4g128190 46.988 83 43 1 4 85 19 101 5.21e-22 91.7
MS.gene020647.t1 MTR_1g083630 50.667 75 37 0 12 86 41 115 5.92e-22 95.1
MS.gene020647.t1 MTR_3g045430 56.410 78 34 0 13 90 43 120 8.83e-22 92.0
MS.gene020647.t1 MTR_1g086530 52.703 74 35 0 17 90 67 140 8.87e-22 91.7
MS.gene020647.t1 MTR_7g109320 56.410 78 34 0 13 90 42 119 1.82e-21 92.0
MS.gene020647.t1 MTR_0247s0040 58.824 68 28 0 17 84 41 108 2.84e-21 88.2
MS.gene020647.t1 MTR_4g029540 48.750 80 38 2 17 95 44 121 4.79e-21 90.1
MS.gene020647.t1 MTR_1g086510 52.778 72 34 0 15 86 53 124 7.79e-21 89.0
MS.gene020647.t1 MTR_4g094982 47.059 85 45 0 19 103 38 122 9.14e-21 89.0
MS.gene020647.t1 MTR_8g006470 54.286 70 31 1 17 85 44 113 4.57e-20 87.4
MS.gene020647.t1 MTR_5g062790 47.297 74 38 1 13 85 39 112 5.60e-20 87.4
MS.gene020647.t1 MTR_3g101290 54.412 68 31 0 19 86 70 137 1.62e-19 84.7
MS.gene020647.t1 MTR_5g088080 47.297 74 38 1 13 85 42 115 1.69e-19 85.5
MS.gene020647.t1 MTR_5g088150 47.297 74 38 1 13 85 42 115 1.69e-19 85.5
MS.gene020647.t1 MTR_5g488210 47.297 74 38 1 13 85 42 115 1.69e-19 85.5
MS.gene020647.t1 MTR_5g088640 47.297 74 38 1 13 85 42 115 1.74e-19 85.5
MS.gene020647.t1 MTR_5g488170 47.297 74 38 1 13 85 42 115 1.92e-19 84.7
MS.gene020647.t1 MTR_5g016510 51.471 68 33 0 19 86 38 105 4.00e-19 85.1
MS.gene020647.t1 MTR_4g019370 49.333 75 37 1 19 92 71 145 4.70e-19 85.5
MS.gene020647.t1 MTR_2g033170 53.521 71 33 0 15 85 56 126 1.45e-18 84.0
MS.gene020647.t1 MTR_5g070020 48.529 68 35 0 19 86 155 222 5.64e-18 82.4
MS.gene020647.t1 MTR_4g105660 47.059 68 36 0 19 86 213 280 4.61e-17 80.5
MS.gene020647.t1 MTR_5g088610 35.772 123 73 2 13 134 39 156 5.00e-17 79.7
MS.gene020647.t1 MTR_4g123040 52.113 71 34 0 15 85 56 126 8.40e-17 78.6
MS.gene020647.t1 MTR_4g088015 43.902 82 45 1 19 99 254 335 8.82e-17 79.7
MS.gene020647.t1 MTR_3g463400 40.404 99 53 3 19 115 166 260 1.24e-16 79.3
MS.gene020647.t1 MTR_5g049190 32.090 134 88 1 19 149 52 185 2.11e-16 76.6
MS.gene020647.t1 MTR_5g082910 50.769 65 32 0 19 83 52 116 2.20e-16 77.0
MS.gene020647.t1 MTR_6g015455 50.000 68 34 0 19 86 38 105 1.08e-15 77.0
MS.gene020647.t1 MTR_7g451170 42.647 68 39 0 19 86 224 291 1.86e-15 75.5
MS.gene020647.t1 MTR_7g037260 44.872 78 42 1 19 95 178 255 2.54e-15 75.1
MS.gene020647.t1 MTR_3g077650 44.118 68 38 0 19 86 214 281 3.71e-15 74.7
MS.gene020647.t1 MTR_7g035350 46.032 63 34 0 19 81 258 320 4.07e-15 74.7
MS.gene020647.t1 MTR_6g074860 44.776 67 37 0 19 85 37 103 8.28e-15 72.0
MS.gene020647.t1 MTR_4g082040 45.588 68 37 0 19 86 138 205 9.21e-15 73.6
MS.gene020647.t1 MTR_1g057980 47.619 63 33 0 19 81 113 175 1.31e-14 72.4
MS.gene020647.t1 MTR_7g061550 27.014 211 130 4 5 191 29 239 2.40e-14 72.0
MS.gene020647.t1 MTR_5g041570 42.647 68 39 0 19 86 167 234 6.96e-14 71.2
MS.gene020647.t1 MTR_7g450950 41.270 63 37 0 19 81 190 252 1.43e-13 69.7
MS.gene020647.t1 MTR_7g061330 44.928 69 38 0 19 87 146 214 3.96e-13 68.9
MS.gene020647.t1 MTR_7g461410 44.928 69 38 0 19 87 146 214 3.96e-13 68.9
MS.gene020647.t1 MTR_7g061330 44.928 69 38 0 19 87 110 178 5.23e-13 68.6
MS.gene020647.t1 MTR_5g010650 48.387 62 32 0 19 80 143 204 5.75e-13 68.6
MS.gene020647.t1 MTR_7g086960 45.946 74 35 1 19 92 122 190 7.16e-13 67.8
MS.gene020647.t1 MTR_1g085880 45.946 74 39 1 13 85 42 115 7.56e-13 65.9
MS.gene020647.t1 MTR_6g027340 42.857 63 36 0 19 81 49 111 1.09e-12 65.5
MS.gene020647.t1 MTR_1g085770 45.946 74 39 1 13 85 42 115 1.30e-12 66.6
MS.gene020647.t1 MTR_6g027360 42.857 63 36 0 19 81 111 173 2.47e-12 65.9
MS.gene020647.t1 MTR_7g037130 43.836 73 36 1 19 86 178 250 2.82e-12 66.2
MS.gene020647.t1 MTR_3g110028 40.580 69 41 0 19 87 118 186 4.92e-12 65.9
MS.gene020647.t1 MTR_5g007300 53.191 47 22 0 13 59 94 140 7.70e-12 61.6
MS.gene020647.t1 MTR_3g089045 42.647 68 39 0 19 86 49 116 1.35e-11 63.5
MS.gene020647.t1 MTR_1g026870 39.130 69 42 0 19 87 118 186 3.09e-11 63.5
MS.gene020647.t1 MTR_5g038910 43.077 65 37 0 22 86 62 126 7.90e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene020647.t1 AT2G36890 77.333 75 17 0 15 89 45 119 5.51e-39 137
MS.gene020647.t1 AT2G36890 77.333 75 17 0 15 89 86 160 9.78e-39 138
MS.gene020647.t1 AT5G65790 63.043 92 34 0 15 106 45 136 2.39e-38 137
MS.gene020647.t1 AT5G57620 69.767 86 22 1 15 96 45 130 2.99e-38 136
MS.gene020647.t1 AT4G37780 73.333 75 20 0 15 89 45 119 3.05e-38 135
MS.gene020647.t1 AT5G23000 77.027 74 17 0 15 88 45 118 5.35e-38 135
MS.gene020647.t1 AT3G49690 74.324 74 19 0 15 88 45 118 2.16e-37 134
MS.gene020647.t1 AT5G56110 65.385 78 27 0 13 90 42 119 2.02e-32 121
MS.gene020647.t1 AT5G65230 62.821 78 29 0 13 90 42 119 6.03e-31 117
MS.gene020647.t1 AT4G17785 60.256 78 31 0 13 90 43 120 2.72e-30 116
MS.gene020647.t1 AT4G17785 59.494 79 32 0 12 90 42 120 3.02e-30 116
MS.gene020647.t1 AT4G09460 55.056 89 34 2 13 101 42 124 3.91e-30 113
MS.gene020647.t1 AT1G34670 60.759 79 31 0 12 90 41 119 5.96e-30 115
MS.gene020647.t1 AT1G35515 48.214 112 48 2 13 114 42 153 6.18e-30 112
MS.gene020647.t1 AT5G10280 59.494 79 32 0 12 90 41 119 7.01e-30 114
MS.gene020647.t1 AT3G61250 58.228 79 33 0 13 91 42 120 7.38e-30 114
MS.gene020647.t1 AT4G12350 45.455 121 65 1 13 132 42 162 1.30e-29 112
MS.gene020647.t1 AT5G40330 35.366 164 79 2 13 176 42 178 2.91e-29 110
MS.gene020647.t1 AT1G63910 58.025 81 34 0 15 95 44 124 3.44e-29 113
MS.gene020647.t1 AT1G22640 45.045 111 60 1 13 122 42 152 4.58e-29 110
MS.gene020647.t1 AT5G26660 61.333 75 29 0 13 87 42 116 8.03e-29 112
MS.gene020647.t1 AT5G62320 41.497 147 68 3 13 156 50 181 1.18e-28 109
MS.gene020647.t1 AT5G61420 63.514 74 27 0 15 88 44 117 1.31e-28 112
MS.gene020647.t1 AT5G14340 38.365 159 93 3 7 162 45 201 1.43e-28 110
MS.gene020647.t1 AT5G14750 56.098 82 32 1 6 87 9 86 1.47e-28 107
MS.gene020647.t1 AT5G26660 60.274 73 29 0 15 87 13 85 1.86e-28 110
MS.gene020647.t1 AT1G57560 60.526 76 30 0 13 88 42 117 2.08e-28 109
MS.gene020647.t1 AT1G57560 60.526 76 30 0 13 88 42 117 2.52e-28 110
MS.gene020647.t1 AT5G15310 54.737 95 42 1 15 109 44 137 2.57e-28 108
MS.gene020647.t1 AT4G38620 43.478 115 60 1 13 122 42 156 2.60e-28 109
MS.gene020647.t1 AT5G16770 57.692 78 33 0 13 90 42 119 2.61e-28 110
MS.gene020647.t1 AT5G16770 57.692 78 33 0 13 90 42 119 2.61e-28 110
MS.gene020647.t1 AT5G15310 54.737 95 42 1 15 109 44 137 2.69e-28 110
MS.gene020647.t1 AT5G15310 54.737 95 42 1 15 109 44 137 2.73e-28 110
MS.gene020647.t1 AT5G16770 57.692 78 33 0 13 90 42 119 3.67e-28 110
MS.gene020647.t1 AT5G16770 57.692 78 33 0 13 90 42 119 3.67e-28 110
MS.gene020647.t1 AT4G22680 57.692 78 33 0 13 90 42 119 3.87e-28 108
MS.gene020647.t1 AT1G09540 61.333 75 29 0 13 87 42 116 4.10e-28 110
MS.gene020647.t1 AT5G07700 63.514 74 27 0 15 88 44 117 4.20e-28 110
MS.gene020647.t1 AT5G07700 63.514 74 27 0 15 88 44 117 4.20e-28 110
MS.gene020647.t1 AT5G06100 37.714 175 88 4 12 170 61 230 4.30e-28 111
MS.gene020647.t1 AT3G47600 62.025 79 30 0 15 93 38 116 4.35e-28 109
MS.gene020647.t1 AT5G60890 57.831 83 35 0 5 87 34 116 5.25e-28 108
MS.gene020647.t1 AT2G16720 54.545 77 35 0 13 89 42 118 5.41e-28 108
MS.gene020647.t1 AT3G47600 62.025 79 30 0 15 93 44 122 5.56e-28 109
MS.gene020647.t1 AT5G06100 37.714 175 88 4 12 170 61 230 8.72e-28 111
MS.gene020647.t1 AT5G06100 37.714 175 88 4 12 170 61 230 8.72e-28 111
MS.gene020647.t1 AT5G06100 37.714 175 88 4 12 170 61 230 8.72e-28 111
MS.gene020647.t1 AT5G06100 37.714 175 88 4 12 170 61 230 8.72e-28 111
MS.gene020647.t1 AT5G54230 60.256 78 31 0 13 90 42 119 9.16e-28 108
MS.gene020647.t1 AT1G66230 60.256 78 31 0 13 90 42 119 1.03e-27 107
MS.gene020647.t1 AT3G27810 37.762 143 79 2 15 147 3 145 1.29e-27 104
MS.gene020647.t1 AT5G14750 58.667 75 31 0 13 87 46 120 1.37e-27 105
MS.gene020647.t1 AT4G05100 56.410 78 34 0 13 90 43 120 1.37e-27 108
MS.gene020647.t1 AT4G21440 56.410 78 34 0 13 90 42 119 1.83e-27 108
MS.gene020647.t1 AT3G01140 54.545 88 35 1 15 97 44 131 2.15e-27 108
MS.gene020647.t1 AT1G74650 58.750 80 33 0 17 96 46 125 2.18e-27 107
MS.gene020647.t1 AT5G62470 62.338 77 29 0 17 93 46 122 2.37e-27 108
MS.gene020647.t1 AT1G16490 49.107 112 53 2 13 122 44 153 2.61e-27 106
MS.gene020647.t1 AT1G06180 60.000 75 30 0 13 87 42 116 2.68e-27 105
MS.gene020647.t1 AT3G02940 56.410 78 34 0 13 90 42 119 3.63e-27 107
MS.gene020647.t1 AT2G31180 60.000 75 30 0 13 87 42 116 3.68e-27 105
MS.gene020647.t1 AT5G07690 62.162 74 28 0 15 88 44 117 4.18e-27 107
MS.gene020647.t1 AT5G16600 58.974 78 32 0 13 90 42 119 4.69e-27 107
MS.gene020647.t1 AT3G27810 37.931 145 80 2 13 147 50 194 4.85e-27 104
MS.gene020647.t1 AT2G32460 56.410 78 34 0 12 89 47 124 4.93e-27 108
MS.gene020647.t1 AT3G28910 58.537 82 34 0 17 98 46 127 4.97e-27 107
MS.gene020647.t1 AT3G02940 56.410 78 34 0 13 90 42 119 5.38e-27 106
MS.gene020647.t1 AT3G02940 56.410 78 34 0 13 90 42 119 5.38e-27 106
MS.gene020647.t1 AT2G32460 58.904 73 30 0 17 89 40 112 5.75e-27 108
MS.gene020647.t1 AT3G13540 55.263 76 34 0 13 88 53 128 5.77e-27 105
MS.gene020647.t1 AT3G01140 54.545 88 35 1 15 97 87 174 5.98e-27 107
MS.gene020647.t1 AT4G01680 60.000 75 30 0 13 87 42 116 7.23e-27 104
MS.gene020647.t1 AT5G62470 62.667 75 28 0 19 93 47 121 7.83e-27 107
MS.gene020647.t1 AT4G01680 60.811 74 29 0 14 87 55 128 8.05e-27 106
MS.gene020647.t1 AT4G34990 56.757 74 32 0 15 88 44 117 9.14e-27 105
MS.gene020647.t1 AT3G13890 56.410 78 34 0 12 89 41 118 9.20e-27 106
MS.gene020647.t1 AT1G18570 54.762 84 38 0 5 88 35 118 9.26e-27 106
MS.gene020647.t1 AT4G01680 60.000 75 30 0 13 87 42 116 9.82e-27 106
MS.gene020647.t1 AT4G26930 43.333 120 54 4 12 122 48 162 1.06e-26 107
MS.gene020647.t1 AT3G27920 57.534 73 31 0 17 89 48 120 1.41e-26 103
MS.gene020647.t1 AT3G11440 53.846 78 36 0 12 89 70 147 1.41e-26 107
MS.gene020647.t1 AT5G12870 53.846 78 36 0 13 90 48 125 1.54e-26 104
MS.gene020647.t1 AT4G28110 54.545 77 35 0 12 88 41 117 1.69e-26 104
MS.gene020647.t1 AT3G23250 57.333 75 32 0 13 87 42 116 2.41e-26 104
MS.gene020647.t1 AT3G13890 58.904 73 30 0 17 89 55 127 2.66e-26 105
MS.gene020647.t1 AT3G11440 53.846 78 36 0 12 89 70 147 2.76e-26 107
MS.gene020647.t1 AT3G11440 53.846 78 36 0 12 89 70 147 2.76e-26 107
MS.gene020647.t1 AT3G11440 53.846 78 36 0 12 89 70 147 2.76e-26 107
MS.gene020647.t1 AT5G55020 55.405 74 33 0 12 85 55 128 2.83e-26 107
MS.gene020647.t1 AT3G12720 53.247 77 36 0 13 89 52 128 3.76e-26 104
MS.gene020647.t1 AT1G18710 56.000 75 33 0 13 87 42 116 4.09e-26 103
MS.gene020647.t1 AT3G28470 65.217 69 24 0 13 81 42 110 5.13e-26 103
MS.gene020647.t1 AT1G56160 58.667 75 31 0 13 87 44 118 5.84e-26 103
MS.gene020647.t1 AT3G08500 57.534 73 31 0 15 87 62 134 1.05e-25 103
MS.gene020647.t1 AT3G01530 49.425 87 39 1 13 94 55 141 1.78e-25 100
MS.gene020647.t1 AT3G12820 56.579 76 33 0 13 88 44 119 2.18e-25 100
MS.gene020647.t1 AT5G52600 61.972 71 27 0 16 86 45 115 3.13e-25 99.4
MS.gene020647.t1 AT1G74430 56.000 75 33 0 13 87 42 116 5.48e-25 100
MS.gene020647.t1 AT5G49330 55.128 78 35 0 13 90 42 119 6.06e-25 101
MS.gene020647.t1 AT5G35550 57.746 71 30 0 17 87 51 121 6.24e-25 100
MS.gene020647.t1 AT4G13480 59.459 74 30 0 13 86 36 109 6.64e-25 99.8
MS.gene020647.t1 AT5G35550 56.164 73 32 0 15 87 46 118 8.12e-25 99.8
MS.gene020647.t1 AT3G53200 50.588 85 42 0 15 99 8 92 9.43e-25 98.2
MS.gene020647.t1 AT1G08810 60.274 73 29 0 15 87 44 116 1.23e-24 99.8
MS.gene020647.t1 AT2G47460 43.519 108 51 3 13 117 42 142 1.32e-24 101
MS.gene020647.t1 AT1G66380 50.000 94 42 1 14 107 6 94 1.42e-24 94.7
MS.gene020647.t1 AT1G79180 56.000 75 33 0 13 87 44 118 1.55e-24 99.8
MS.gene020647.t1 AT3G62610 56.000 75 33 0 13 87 42 116 1.62e-24 100
MS.gene020647.t1 AT3G24310 58.108 74 31 0 13 86 48 121 1.65e-24 99.0
MS.gene020647.t1 AT2G26960 55.072 69 31 0 17 85 54 122 2.01e-24 101
MS.gene020647.t1 AT1G79180 57.746 71 30 0 17 87 81 151 3.01e-24 99.4
MS.gene020647.t1 AT1G74080 36.047 172 90 3 15 186 44 195 3.56e-24 99.4
MS.gene020647.t1 AT5G40350 54.054 74 34 0 15 88 4 77 3.83e-24 95.5
MS.gene020647.t1 AT3G12820 57.143 70 30 0 19 88 2 71 3.97e-24 96.3
MS.gene020647.t1 AT5G59780 54.167 72 33 0 15 86 19 90 3.99e-24 96.7
MS.gene020647.t1 AT5G59780 54.054 74 34 0 13 86 38 111 4.01e-24 97.1
MS.gene020647.t1 AT3G53200 51.807 83 40 0 17 99 43 125 4.84e-24 97.1
MS.gene020647.t1 AT3G46130 52.632 76 36 0 11 86 15 90 6.28e-24 96.7
MS.gene020647.t1 AT3G46130 54.054 74 34 0 13 86 39 112 9.23e-24 96.7
MS.gene020647.t1 AT5G52260 57.333 75 32 0 14 88 43 117 1.01e-23 97.1
MS.gene020647.t1 AT5G40350 53.947 76 35 0 13 88 47 122 1.16e-23 95.5
MS.gene020647.t1 AT3G46130 55.714 70 31 0 17 86 11 80 1.44e-23 95.5
MS.gene020647.t1 AT1G66380 49.462 93 42 1 15 107 40 127 3.60e-23 92.0
MS.gene020647.t1 AT1G66370 59.155 71 29 0 16 86 41 111 4.10e-23 94.7
MS.gene020647.t1 AT1G56650 44.262 122 61 3 15 132 40 158 7.23e-23 94.4
MS.gene020647.t1 AT1G68320 50.633 79 39 0 13 91 49 127 1.07e-22 94.4
MS.gene020647.t1 AT1G48000 41.525 118 67 1 15 130 64 181 1.70e-22 93.2
MS.gene020647.t1 AT1G25340 53.333 75 35 0 17 91 52 126 1.80e-22 94.0
MS.gene020647.t1 AT3G30210 47.423 97 47 1 13 105 57 153 2.68e-22 93.2
MS.gene020647.t1 AT1G66390 59.722 72 29 0 15 86 40 111 6.67e-22 91.7
MS.gene020647.t1 AT4G25560 54.054 74 34 0 15 88 42 115 8.38e-22 92.0
MS.gene020647.t1 AT3G48920 48.718 78 40 0 15 92 50 127 1.93e-21 90.5
MS.gene020647.t1 AT1G25340 53.521 71 33 0 21 91 51 121 3.70e-21 90.1
MS.gene020647.t1 AT2G47190 54.286 70 32 0 17 86 54 123 4.78e-21 89.7
MS.gene020647.t1 AT1G25340 53.521 71 33 0 21 91 51 121 5.70e-21 90.1
MS.gene020647.t1 AT5G67300 51.351 74 36 0 19 92 39 112 2.65e-20 88.2
MS.gene020647.t1 AT3G50060 55.882 68 30 0 19 86 39 106 2.70e-20 88.2
MS.gene020647.t1 AT1G71030 52.174 69 33 0 22 90 5 73 4.63e-20 85.1
MS.gene020647.t1 AT1G71030 52.174 69 33 0 22 90 19 87 5.46e-20 85.1
MS.gene020647.t1 AT1G22640 41.053 95 55 1 29 122 1 95 7.32e-20 85.1
MS.gene020647.t1 AT3G60460 52.857 70 32 1 17 85 45 114 8.94e-20 86.7
MS.gene020647.t1 AT3G55730 52.941 68 32 0 19 86 89 156 4.85e-19 85.9
MS.gene020647.t1 AT3G06490 52.055 73 35 0 13 85 49 121 8.25e-19 84.3
MS.gene020647.t1 AT5G49620 52.055 73 35 0 13 85 56 128 1.40e-18 83.6
MS.gene020647.t1 AT2G39880 52.941 68 32 0 19 86 83 150 1.87e-18 84.0
MS.gene020647.t1 AT2G26950 44.286 70 39 0 13 82 46 115 2.75e-18 83.6
MS.gene020647.t1 AT4G37260 51.471 68 33 0 19 86 46 113 2.97e-18 82.8
MS.gene020647.t1 AT5G14750 54.237 59 27 0 29 87 1 59 6.10e-18 78.6
MS.gene020647.t1 AT5G14750 54.237 59 27 0 29 87 1 59 6.10e-18 78.6
MS.gene020647.t1 AT1G18960 43.182 88 47 2 13 100 37 121 6.58e-18 81.6
MS.gene020647.t1 AT2G23290 51.471 68 33 0 19 86 46 113 1.30e-17 80.9
MS.gene020647.t1 AT3G09230 42.308 78 45 0 19 96 88 165 1.72e-17 81.3
MS.gene020647.t1 AT3G27785 31.081 148 88 3 19 162 222 359 2.35e-17 81.3
MS.gene020647.t1 AT5G40360 37.895 95 58 1 19 113 191 284 8.77e-17 79.3
MS.gene020647.t1 AT2G25230 46.269 67 36 0 19 85 59 125 1.06e-16 77.4
MS.gene020647.t1 AT3G23250 52.542 59 28 0 29 87 1 59 1.77e-16 76.6
MS.gene020647.t1 AT4G18770 39.175 97 52 2 19 115 250 339 1.86e-16 78.6
MS.gene020647.t1 AT5G11050 40.260 77 46 0 19 95 138 214 2.06e-16 78.6
MS.gene020647.t1 AT1G17950 27.179 195 116 5 19 195 38 224 4.53e-16 75.9
MS.gene020647.t1 AT3G29020 43.478 69 39 0 19 87 100 168 2.96e-15 74.3
MS.gene020647.t1 AT3G29020 43.478 69 39 0 19 87 98 166 4.11e-15 72.8
MS.gene020647.t1 AT5G49620 43.678 87 35 1 13 85 56 142 4.13e-15 73.9
MS.gene020647.t1 AT5G58850 39.189 74 45 0 19 92 138 211 6.79e-15 73.9
MS.gene020647.t1 AT5G17800 34.247 146 88 2 17 162 124 261 1.51e-14 72.4
MS.gene020647.t1 AT5G40430 37.778 90 51 1 1 85 63 152 1.74e-14 71.6
MS.gene020647.t1 AT1G69560 37.931 87 49 1 19 100 140 226 5.31e-14 70.9
MS.gene020647.t1 AT1G69560 37.931 87 49 1 19 100 156 242 6.80e-14 70.9
MS.gene020647.t1 AT1G26780 42.647 68 39 0 19 86 131 198 7.98e-14 70.5
MS.gene020647.t1 AT1G26780 42.647 68 39 0 19 86 131 198 1.01e-13 69.7
MS.gene020647.t1 AT3G09370 45.588 68 37 0 19 86 168 235 1.41e-13 70.5
MS.gene020647.t1 AT3G09370 45.588 68 37 0 19 86 163 230 1.49e-13 70.1
MS.gene020647.t1 AT3G09370 45.588 68 37 0 19 86 176 243 1.96e-13 70.1
MS.gene020647.t1 AT1G73410 45.588 68 37 0 19 86 39 106 4.37e-13 67.4
MS.gene020647.t1 AT5G02320 43.478 69 39 0 19 87 160 228 6.46e-13 68.6
MS.gene020647.t1 AT5G02320 43.478 69 39 0 19 87 160 228 6.46e-13 68.6
MS.gene020647.t1 AT5G02320 43.478 69 39 0 19 87 100 168 7.71e-13 68.2
MS.gene020647.t1 AT1G73410 45.588 68 37 0 19 86 39 106 9.35e-13 65.9
MS.gene020647.t1 AT4G33450 42.647 68 39 0 19 86 52 119 5.30e-12 64.3
MS.gene020647.t1 AT4G32730 34.513 113 66 2 19 131 120 224 1.26e-11 64.7
MS.gene020647.t1 AT4G32730 34.513 113 66 2 19 131 120 224 1.32e-11 64.7
MS.gene020647.t1 AT4G32730 34.513 113 66 2 19 131 120 224 1.32e-11 64.7
MS.gene020647.t1 AT4G32730 34.513 113 66 2 19 131 120 224 1.32e-11 64.7
MS.gene020647.t1 AT4G32730 34.513 113 66 2 19 131 120 224 1.32e-11 64.7
MS.gene020647.t1 AT4G00540 40.580 69 41 0 19 87 139 207 1.69e-11 63.9
MS.gene020647.t1 AT4G00540 40.580 69 41 0 19 87 137 205 1.99e-11 63.9
MS.gene020647.t1 AT5G11510 37.681 69 43 0 19 87 114 182 2.56e-11 63.9
MS.gene020647.t1 AT5G11510 37.681 69 43 0 19 87 114 182 2.56e-11 63.9
MS.gene020647.t1 AT5G11510 37.681 69 43 0 19 87 114 182 2.56e-11 63.9
MS.gene020647.t1 AT5G11510 37.681 69 43 0 19 87 114 182 3.52e-11 63.5
MS.gene020647.t1 AT5G11510 37.681 69 43 0 19 87 114 182 3.72e-11 63.5
MS.gene020647.t1 AT2G02820 43.077 65 37 0 22 86 66 130 5.23e-11 62.8
MS.gene020647.t1 AT1G14350 43.077 65 37 0 22 86 61 125 5.44e-11 62.4
MS.gene020647.t1 AT1G14350 43.077 65 37 0 22 86 61 125 5.44e-11 62.4
MS.gene020647.t1 AT2G02820 43.077 65 37 0 22 86 66 130 5.66e-11 62.4

Find 33 sgRNAs with CRISPR-Local

Find 75 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTAATGCTGGTAGTGTTAA+TGG 0.223530 7.2:+10575656 MS.gene020647:CDS
GATCTATGACATGGCTGATT+TGG 0.318805 7.2:-10575526 None:intergenic
CTGGTAGTGTTAATGGATTA+TGG 0.348044 7.2:+10575663 MS.gene020647:CDS
AACTCTCCATGCTTAATGTT+TGG 0.375083 7.2:-10574522 None:intergenic
TGCACCCTCTTTGCTAGCAT+TGG 0.383188 7.2:+10574570 MS.gene020647:CDS
AACTCATACGATCACTCTAA+TGG 0.401023 7.2:+10575383 MS.gene020647:CDS
CACTGAATGAGAATGATTCA+TGG 0.423445 7.2:-10575279 None:intergenic
TGGTAGTGTTAATGGATTAT+GGG 0.425610 7.2:+10575664 MS.gene020647:CDS
AACATGGAACTGGAGGAAAC+TGG 0.440894 7.2:+10574284 None:intergenic
ACAATGATGTAAAGAACTAC+TGG 0.442145 7.2:+10575228 MS.gene020647:CDS
CACTCAGGTTTGACAAGGTG+TGG 0.467373 7.2:+10574462 MS.gene020647:intron
CATGAGCTTGTTGAAGGAAA+TGG 0.473527 7.2:+10575548 MS.gene020647:CDS
ATAGATCATGAGCTTGTTGA+AGG 0.487266 7.2:+10575542 MS.gene020647:CDS
GATAAAAGGGTAACTTGTTG+AGG 0.488023 7.2:-10575311 None:intergenic
TACATAGAGAAACATGGAAC+TGG 0.488674 7.2:+10574274 None:intergenic
ACTTGATGATGTAGATGAGT+AGG 0.504140 7.2:-10575429 None:intergenic
TCTAATGGATCTTTCAGTAC+AGG 0.506455 7.2:+10575398 MS.gene020647:CDS
AAGTTAATGTTCTCTAATGC+TGG 0.520204 7.2:+10575644 MS.gene020647:CDS
TCTTTGCTAGCATTGGAAGC+AGG 0.522442 7.2:+10574577 MS.gene020647:CDS
GCTTCCAATGCTAGCAAAGA+GGG 0.543801 7.2:-10574574 None:intergenic
GCAAGAGTTGCAGACTTCGA+TGG 0.557930 7.2:+10574484 MS.gene020647:CDS
CTCAGACCAAACATTAAGCA+TGG 0.563901 7.2:+10574516 MS.gene020647:CDS
CATGAATCATTCTCATTCAG+TGG 0.595190 7.2:+10575280 MS.gene020647:CDS
ATAATAGCATCTAAGTTACA+AGG 0.599464 7.2:+10575197 MS.gene020647:CDS
TTGTCTGTGAATGATAATGA+TGG 0.604791 7.2:-10575362 None:intergenic
TCATCTATATCATAATCCAA+TGG 0.614704 7.2:-10575695 None:intergenic
TGCTTCCAATGCTAGCAAAG+AGG 0.618336 7.2:-10574575 None:intergenic
ATTATGGGGAGAAAATCCAT+TGG 0.620139 7.2:+10575679 MS.gene020647:CDS
ATAGAGAAACATGGAACTGG+AGG 0.632919 7.2:+10574277 None:intergenic
CAAGCTCATGATCTATGACA+TGG 0.635000 7.2:-10575535 None:intergenic
TGATTACATCTACAGTGAGG+TGG 0.656607 7.2:+10575610 MS.gene020647:CDS
GGTAGTGTTAATGGATTATG+GGG 0.672882 7.2:+10575665 MS.gene020647:CDS
TGTTGATTACATCTACAGTG+AGG 0.727616 7.2:+10575607 MS.gene020647:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TACTATATATATTATATGAT+TGG - chr7.2:10574349-10574368 None:intergenic 10.0%
!! AATGTTAAAACTTACATTAT+TGG + chr7.2:10575138-10575157 MS.gene020647:intron 15.0%
!! AGTAAAAAGATATATGTATT+TGG - chr7.2:10574890-10574909 None:intergenic 15.0%
!! TATGATATGATATATATGAA+TGG + chr7.2:10574388-10574407 MS.gene020647:intron 15.0%
!!! AAACTAGTTTATAATAAAAG+TGG - chr7.2:10574749-10574768 None:intergenic 15.0%
!!! ATCTTATTTTTCTCTTCAAT+TGG - chr7.2:10574693-10574712 None:intergenic 20.0%
! ATAATAGCATCTAAGTTACA+AGG + chr7.2:10575197-10575216 MS.gene020647:CDS 25.0%
! CAAGCTTAAGAAAAAGATTA+TGG + chr7.2:10575256-10575275 MS.gene020647:CDS 25.0%
! TCAAGATCAAGATCTTAATT+TGG - chr7.2:10575113-10575132 None:intergenic 25.0%
! TCATCTATATCATAATCCAA+TGG - chr7.2:10575698-10575717 None:intergenic 25.0%
!! CATAATCTTTTTCTTAAGCT+TGG - chr7.2:10575258-10575277 None:intergenic 25.0%
!! TACTTATATTTAAGACACGA+GGG + chr7.2:10574906-10574925 MS.gene020647:intron 25.0%
!! TATATTGTTTTCATCCTTCA+TGG - chr7.2:10574662-10574681 None:intergenic 25.0%
!! TGGTAAATTTAGAATACTAG+CGG - chr7.2:10574849-10574868 None:intergenic 25.0%
!! TTACTTATATTTAAGACACG+AGG + chr7.2:10574905-10574924 MS.gene020647:intron 25.0%
!!! ATGATTTTGTTGAGTTTTGA+AGG - chr7.2:10575340-10575359 None:intergenic 25.0%
!!! TTTTTGCTATTACTCTTAGT+GGG - chr7.2:10575506-10575525 None:intergenic 25.0%
AAGTTAATGTTCTCTAATGC+TGG + chr7.2:10575644-10575663 MS.gene020647:CDS 30.0%
ACAATGATGTAAAGAACTAC+TGG + chr7.2:10575228-10575247 MS.gene020647:CDS 30.0%
ATTAAGATCTTGATCTTGAG+TGG + chr7.2:10575114-10575133 MS.gene020647:intron 30.0%
ATTACTCTGCCAAAAAAAGT+TGG + chr7.2:10574307-10574326 MS.gene020647:CDS 30.0%
CAATCAGAAAAACATGACAA+AGG - chr7.2:10574430-10574449 None:intergenic 30.0%
CATTTACACAGTTGTGAATA+TGG - chr7.2:10575019-10575038 None:intergenic 30.0%
GATCCATATTCAAAAGAATG+CGG + chr7.2:10574966-10574985 MS.gene020647:intron 30.0%
! ATCTTAATTTGGAATGCATG+AGG - chr7.2:10575102-10575121 None:intergenic 30.0%
! CTTCATGGAAGCATAAAAAA+TGG - chr7.2:10574647-10574666 None:intergenic 30.0%
! TCAAAATTTTCACATAGTGC+AGG + chr7.2:10575168-10575187 MS.gene020647:intron 30.0%
! TTGTCTGTGAATGATAATGA+TGG - chr7.2:10575365-10575384 None:intergenic 30.0%
!! TGGTAGTGTTAATGGATTAT+GGG + chr7.2:10575664-10575683 MS.gene020647:CDS 30.0%
!! TTGTGATTATTTTTCCACTC+AGG + chr7.2:10574447-10574466 MS.gene020647:intron 30.0%
!!! ACGTACTAACCAACTTTTTT+TGG - chr7.2:10574319-10574338 None:intergenic 30.0%
!!! AGTTTTGAAGGATGGATAAA+AGG - chr7.2:10575328-10575347 None:intergenic 30.0%
!!! CATTTTTTATGCTTCCATGA+AGG + chr7.2:10574645-10574664 MS.gene020647:intron 30.0%
!!! GTTTTGAAGGATGGATAAAA+GGG - chr7.2:10575327-10575346 None:intergenic 30.0%
!!! GTTTTTGCTATTACTCTTAG+TGG - chr7.2:10575507-10575526 None:intergenic 30.0%
!!! TTTTGTTGAGTTTTGAAGGA+TGG - chr7.2:10575336-10575355 None:intergenic 30.0%
AACTCATACGATCACTCTAA+TGG + chr7.2:10575383-10575402 MS.gene020647:CDS 35.0%
AACTCTCCATGCTTAATGTT+TGG - chr7.2:10574525-10574544 None:intergenic 35.0%
ATTATGGGGAGAAAATCCAT+TGG + chr7.2:10575679-10575698 MS.gene020647:CDS 35.0%
CACTGAATGAGAATGATTCA+TGG - chr7.2:10575282-10575301 None:intergenic 35.0%
CATGAATCATTCTCATTCAG+TGG + chr7.2:10575280-10575299 MS.gene020647:CDS 35.0%
GATCTCTGATCAAGATCAAA+CGG + chr7.2:10574992-10575011 MS.gene020647:intron 35.0%
TGAGAGGAGATTTCACATTT+CGG - chr7.2:10574938-10574957 None:intergenic 35.0%
! AAATTTTCACATAGTGCAGG+TGG + chr7.2:10575171-10575190 MS.gene020647:intron 35.0%
! ACATCATCAAGTCTTTTGAG+TGG + chr7.2:10575440-10575459 MS.gene020647:CDS 35.0%
! AGACCGCATTCTTTTGAATA+TGG - chr7.2:10574972-10574991 None:intergenic 35.0%
! GATCATGCACAAAGAAGTAT+TGG + chr7.2:10574710-10574729 MS.gene020647:intron 35.0%
! GCAGAGAATCTCTTTTATCT+CGG - chr7.2:10574809-10574828 None:intergenic 35.0%
! GGTCTAATTGTAGACTAGTT+TGG - chr7.2:10574869-10574888 None:intergenic 35.0%
! TCTAATGCTGGTAGTGTTAA+TGG + chr7.2:10575656-10575675 MS.gene020647:CDS 35.0%
! TCTAATGGATCTTTCAGTAC+AGG + chr7.2:10575398-10575417 MS.gene020647:CDS 35.0%
! TGTTGATTACATCTACAGTG+AGG + chr7.2:10575607-10575626 MS.gene020647:CDS 35.0%
!! ACTTGATGATGTAGATGAGT+AGG - chr7.2:10575432-10575451 None:intergenic 35.0%
!! ATAGATCATGAGCTTGTTGA+AGG + chr7.2:10575542-10575561 MS.gene020647:CDS 35.0%
!! CTGGTAGTGTTAATGGATTA+TGG + chr7.2:10575663-10575682 MS.gene020647:CDS 35.0%
!! GATAAAAGGGTAACTTGTTG+AGG - chr7.2:10575314-10575333 None:intergenic 35.0%
!! GGTAGTGTTAATGGATTATG+GGG + chr7.2:10575665-10575684 MS.gene020647:CDS 35.0%
CAAGCTCATGATCTATGACA+TGG - chr7.2:10575538-10575557 None:intergenic 40.0%
CAGAGAATCTGAATCCAAAC+TGG - chr7.2:10574782-10574801 None:intergenic 40.0%
CAGTTTGGATTCAGATTCTC+TGG + chr7.2:10574780-10574799 MS.gene020647:intron 40.0%
CTCAGACCAAACATTAAGCA+TGG + chr7.2:10574516-10574535 MS.gene020647:CDS 40.0%
GATCTATGACATGGCTGATT+TGG - chr7.2:10575529-10575548 None:intergenic 40.0%
TGATTACATCTACAGTGAGG+TGG + chr7.2:10575610-10575629 MS.gene020647:CDS 40.0%
TGTGAAATCTCCTCTCAGAT+TGG + chr7.2:10574941-10574960 MS.gene020647:intron 40.0%
! GTTTAAGTGAAGTGCCAGTT+TGG + chr7.2:10574765-10574784 MS.gene020647:intron 40.0%
! TTTTCCACTCAGGTTTGACA+AGG + chr7.2:10574457-10574476 MS.gene020647:intron 40.0%
!! CATGAGCTTGTTGAAGGAAA+TGG + chr7.2:10575548-10575567 MS.gene020647:CDS 40.0%
GCTTCCAATGCTAGCAAAGA+GGG - chr7.2:10574577-10574596 None:intergenic 45.0%
TATGGATCGTCCAATCTGAG+AGG - chr7.2:10574954-10574973 None:intergenic 45.0%
TGCTTCCAATGCTAGCAAAG+AGG - chr7.2:10574578-10574597 None:intergenic 45.0%
! TCTTTGCTAGCATTGGAAGC+AGG + chr7.2:10574577-10574596 MS.gene020647:CDS 45.0%
CACACCTTGTCAAACCTGAG+TGG - chr7.2:10574464-10574483 None:intergenic 50.0%
CACTCAGGTTTGACAAGGTG+TGG + chr7.2:10574462-10574481 MS.gene020647:intron 50.0%
GCAAGAGTTGCAGACTTCGA+TGG + chr7.2:10574484-10574503 MS.gene020647:CDS 50.0%
TGCACCCTCTTTGCTAGCAT+TGG + chr7.2:10574570-10574589 MS.gene020647:CDS 50.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 10574287 10575784 10574287 ID=MS.gene020647
chr7.2 mRNA 10574287 10575784 10574287 ID=MS.gene020647.t1;Parent=MS.gene020647
chr7.2 exon 10574287 10574332 10574287 ID=MS.gene020647.t1.exon1;Parent=MS.gene020647.t1
chr7.2 CDS 10574287 10574332 10574287 ID=cds.MS.gene020647.t1;Parent=MS.gene020647.t1
chr7.2 exon 10574469 10574598 10574469 ID=MS.gene020647.t1.exon2;Parent=MS.gene020647.t1
chr7.2 CDS 10574469 10574598 10574469 ID=cds.MS.gene020647.t1;Parent=MS.gene020647.t1
chr7.2 exon 10575190 10575784 10575190 ID=MS.gene020647.t1.exon3;Parent=MS.gene020647.t1
chr7.2 CDS 10575190 10575784 10575190 ID=cds.MS.gene020647.t1;Parent=MS.gene020647.t1
Gene Sequence

>MS.gene020647

ATGGAACTGGAGGAAACTGGATTACTCTGCCAAAAAAAGTTGGTTAGTACGTGCAATCACCAATCATATAATATATATAGTACTATACTCTTCAAGATGCTTATGATATGATATATATGAATGGATATTTACTTTTTGTTCCTTTGTCATGTTTTTCTGATTGTGATTATTTTTCCACTCAGGTTTGACAAGGTGTGGCAAGAGTTGCAGACTTCGATGGCTTAACTATCTCAGACCAAACATTAAGCATGGAGAGTTCTCTGACTCTGAAGATAAAATAATATGCACCCTCTTTGCTAGCATTGGAAGCAGGTAGTCTTCTTTTTCACTTAATTCTCATCTCAACTTTCATTTCTACCATTTTTTATGCTTCCATGAAGGATGAAAACAATATAGTTAATTTCCAATTGAAGAGAAAAATAAGATCATGCACAAAGAAGTATTGGAAAGTTTTATTTTCCACTTTTATTATAAACTAGTTTAAGTGAAGTGCCAGTTTGGATTCAGATTCTCTGGAGTCCGAGATAAAAGAGATTCTCTGCAATCACGCGATCTCAAACCGCTAGTATTCTAAATTTACCAAACTAGTCTACAATTAGACCAAATACATATATCTTTTTACTTATATTTAAGACACGAGGGAGTAAACCGAAATGTGAAATCTCCTCTCAGATTGGACGATCCATATTCAAAAGAATGCGGTCTGATCTCTGATCAAGATCAAACGGTCCATATTCACAACTGTGTAAATGCAAACAATCTATTTTTCGTTCAATATACTATGTATTTTGTTCTTTTAGATTTTCTCATCACCTCATGCATTCCAAATTAAGATCTTGATCTTGAGTGGTAATGTTAAAACTTACATTATTGGTAATGTTTCAAAATTTTCACATAGTGCAGGTGGTCAATAATAGCATCTAAGTTACAAGGCAGAACTGACAATGATGTAAAGAACTACTGGAACACCAAGCTTAAGAAAAAGATTATGGCCATGAATCATTCTCATTCAGTGGAGATGAAACCTCAACAAGTTACCCTTTTATCCATCCTTCAAAACTCAACAAAATCATCTCCATCATTATCATTCACAGACAACTCATACGATCACTCTAATGGATCTTTCAGTACAGGTTCAATCTCCTACTCATCTACATCATCAAGTCTTTTGAGTGGAAATTCTTCTACTTCTGCAGCACAAGAAAGTTTCATTAGTCCCACTAAGAGTAATAGCAAAAACCAAATCAGCCATGTCATAGATCATGAGCTTGTTGAAGGAAATGGTGATGCAACTTTTGTAGAGCAGAATAATATTGATTCTGTTGATTACATCTACAGTGAGGTGGAAGATAGTGAGAAGTTAATGTTCTCTAATGCTGGTAGTGTTAATGGATTATGGGGAGAAAATCCATTGGATTATGATATAGATGAAATTAAACAGCTAATAAACACTACTGCATCTACTAGTAGTTGCAACAACTTTTTGTTTGTTGACTAA
Protein sequence

>MS.gene020647.t1

MELEETGLLCQKKLVSLTRCGKSCRLRWLNYLRPNIKHGEFSDSEDKIICTLFASIGSRWSIIASKLQGRTDNDVKNYWNTKLKKKIMAMNHSHSVEMKPQQVTLLSILQNSTKSSPSLSFTDNSYDHSNGSFSTGSISYSSTSSSLLSGNSSTSAAQESFISPTKSNSKNQISHVIDHELVEGNGDATFVEQNNIDSVDYIYSEVEDSEKLMFSNAGSVNGLWGENPLDYDIDEIKQLINTTASTSSCNNFLFVD