AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene020891

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene020891.t1 MTR_5g097410 97.668 1115 26 0 2 1116 101 1215 0.0 2273
MS.gene020891.t1 MTR_3g085130 55.681 977 376 15 160 1113 89 1031 0.0 1045
MS.gene020891.t1 MTR_8g080770 53.387 989 403 11 144 1113 18 967 0.0 1033
MS.gene020891.t1 MTR_8g106150 52.199 1023 427 15 123 1113 2 994 0.0 976
MS.gene020891.t1 MTR_8g080770 53.803 894 357 10 239 1113 2 858 0.0 941
MS.gene020891.t1 MTR_3g085130 55.100 853 328 14 284 1113 1 821 0.0 890
MS.gene020891.t1 MTR_8g106150 51.921 755 321 12 389 1113 9 751 0.0 707
MS.gene020891.t1 MTR_2g067240 52.063 315 89 3 327 639 1 255 4.30e-94 301
MS.gene020891.t1 MTR_3g105590 34.035 285 165 7 521 793 373 646 1.55e-35 147
MS.gene020891.t1 MTR_3g105590 35.115 131 77 2 976 1099 805 934 4.68e-15 80.9
MS.gene020891.t1 MTR_1g013360 33.443 305 169 7 521 793 379 681 1.84e-34 143
MS.gene020891.t1 MTR_1g013360 34.109 129 78 2 977 1099 870 997 4.46e-13 74.3
MS.gene020891.t1 MTR_8g075340 27.341 534 311 16 473 967 426 921 1.14e-33 141
MS.gene020891.t1 MTR_8g075340 31.944 144 61 4 976 1101 1030 1154 7.90e-12 70.5
MS.gene020891.t1 MTR_5g022470 31.962 316 181 6 473 779 464 754 1.03e-32 138
MS.gene020891.t1 MTR_5g022470 32.164 171 66 5 957 1101 1038 1184 2.84e-13 75.1
MS.gene020891.t1 MTR_5g022470 31.288 326 190 6 473 789 464 764 1.03e-32 138
MS.gene020891.t1 MTR_5g044100 47.917 144 52 3 903 1046 103 223 6.62e-31 122
MS.gene020891.t1 MTR_4g031150 26.895 409 246 6 512 906 387 756 3.48e-28 122
MS.gene020891.t1 MTR_7g109150 30.389 283 158 5 512 793 338 582 8.69e-25 111
MS.gene020891.t1 MTR_1g087140 26.111 360 216 12 477 809 346 682 1.91e-23 108
MS.gene020891.t1 MTR_1g087140 31.757 148 67 6 975 1112 973 1096 8.94e-12 70.1
MS.gene020891.t1 MTR_1g090850 25.948 343 227 8 477 807 335 662 2.27e-20 98.2
MS.gene020891.t1 MTR_1g090850 33.333 177 88 5 940 1109 892 1045 7.48e-14 77.0
MS.gene020891.t1 MTR_1g073840 22.103 466 305 12 497 956 344 757 4.75e-13 73.9
MS.gene020891.t1 MTR_7g116330 20.680 353 232 7 505 853 362 670 8.42e-12 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene020891.t1 AT5G35750 64.971 1022 332 9 101 1113 169 1173 0.0 1310
MS.gene020891.t1 AT1G27320 55.895 950 380 11 177 1114 107 1029 0.0 1042
MS.gene020891.t1 AT2G01830 53.381 976 397 16 163 1113 118 1060 0.0 974
MS.gene020891.t1 AT2G01830 53.381 976 397 16 163 1113 106 1048 0.0 974
MS.gene020891.t1 AT2G01830 53.381 976 397 16 163 1113 106 1048 0.0 974
MS.gene020891.t1 AT2G01830 53.381 976 397 16 163 1113 106 1048 0.0 974
MS.gene020891.t1 AT2G01830 53.381 976 397 16 163 1113 106 1048 0.0 974
MS.gene020891.t1 AT2G01830 53.381 976 397 16 163 1113 129 1071 0.0 973
MS.gene020891.t1 AT5G10720 35.689 283 149 6 521 803 369 618 5.30e-40 161
MS.gene020891.t1 AT5G10720 34.615 130 78 3 976 1099 779 907 1.71e-13 75.9
MS.gene020891.t1 AT2G17820 31.098 328 188 6 473 789 453 753 2.33e-35 147
MS.gene020891.t1 AT1G66340 30.460 348 193 6 512 853 337 641 1.39e-33 139
MS.gene020891.t1 AT2G40940 32.155 283 153 6 512 793 337 581 1.67e-24 110
MS.gene020891.t1 AT2G47430 27.273 308 177 10 507 793 384 665 4.61e-22 103
MS.gene020891.t1 AT2G47430 34.483 174 72 7 951 1102 956 1109 3.30e-13 75.1
MS.gene020891.t1 AT3G23150 24.869 382 227 12 515 879 364 702 3.05e-12 71.6
MS.gene020891.t1 AT3G04580 35.200 125 60 4 976 1099 643 747 6.67e-11 67.0
MS.gene020891.t1 AT3G04580 35.200 125 60 4 976 1099 643 747 6.67e-11 67.0

Find 232 sgRNAs with CRISPR-Local

Find 371 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTTCCTTGGACAGCATTC+TGG 0.103589 5.4:+76592028 MS.gene020891:CDS
ATTAATTACCCGTCCATTTC+TGG 0.122771 5.4:-76594336 None:intergenic
ATTGATACACAAACGAATTT+TGG 0.159316 5.4:+76594161 MS.gene020891:CDS
GTTTGACTGCAGAAAATATT+TGG 0.207225 5.4:+76590812 MS.gene020891:intron
GGATGTTGTTTGGTCCTTAT+TGG 0.219358 5.4:+76590231 MS.gene020891:CDS
TTGGACTTTAGTAGTTTAAA+AGG 0.222874 5.4:-76591325 None:intergenic
AAAGTTTCAAAAGTTAAATT+TGG 0.231203 5.4:+76593265 MS.gene020891:CDS
GTTAATGTGTCCGAAGAATT+TGG 0.236764 5.4:+76589368 MS.gene020891:CDS
CTTTAGCTCCTTCTGCTCAT+TGG 0.237386 5.4:-76594007 None:intergenic
TCCTTTGGCCTCTGAGTTCC+AGG 0.238891 5.4:+76593580 MS.gene020891:CDS
AATTTATCTAGTTTAATTAA+AGG 0.239445 5.4:+76590210 MS.gene020891:CDS
TGTTTGGTAACATTTCTTAT+TGG 0.260483 5.4:+76594523 MS.gene020891:CDS
TTTAGCTCCTTCTGCTCATT+GGG 0.261024 5.4:-76594006 None:intergenic
CACGTAAGCGGTCTAGATTT+TGG 0.265877 5.4:+76591876 MS.gene020891:CDS
ACAGCATTCTGGGCATCCTT+GGG 0.276319 5.4:+76592039 MS.gene020891:CDS
GACCTCATGGGAGGAGAAAT+TGG 0.278166 5.4:+76593458 MS.gene020891:CDS
TCCATGTATTGGAAGGTATC+TGG 0.278596 5.4:+76591704 MS.gene020891:intron
TTTGTTATTACCTTTCTTCT+TGG 0.283122 5.4:+76592066 MS.gene020891:CDS
ACCCGTCCATTTCTGGCATT+TGG 0.297045 5.4:-76594329 None:intergenic
TTGGTTCTGCATGGTTATTT+AGG 0.298048 5.4:+76590436 MS.gene020891:CDS
ACCACTCGTGTGAGCAGTTT+GGG 0.298376 5.4:-76592615 None:intergenic
GTGGCACGTGTCTTCAGTTT+TGG 0.304174 5.4:+76594666 MS.gene020891:CDS
TTTCAGTTCATTCACAATAA+AGG 0.310106 5.4:+76593080 MS.gene020891:intron
GACAGCATTCTGGGCATCCT+TGG 0.312293 5.4:+76592038 MS.gene020891:CDS
CAAATAATTACCAATCTTGT+TGG 0.322920 5.4:+76592962 MS.gene020891:CDS
TGAACAAAGTCATCAAGAAT+TGG 0.326747 5.4:-76589438 None:intergenic
AAGTACAACACCGAGGTAAT+TGG 0.329193 5.4:-76591344 None:intergenic
GGGTGGTAAGGCTGCTCTTA+AGG 0.331631 5.4:+76594263 MS.gene020891:CDS
GAAGGTGTTCTGCGAAAATA+TGG 0.332772 5.4:+76594219 MS.gene020891:CDS
TCTGAAAAGTCCGATGAAAA+AGG 0.335369 5.4:+76592761 MS.gene020891:CDS
TTCTTATAGACAAGGATTCT+TGG 0.335599 5.4:+76593875 MS.gene020891:CDS
TGGTTGGACAATTAAGAAAA+TGG 0.343061 5.4:+76590937 MS.gene020891:CDS
GACTAGGCTAATCCGGTATA+TGG 0.343716 5.4:+76594452 MS.gene020891:CDS
ATTTCCTTGGACAGCATTCT+GGG 0.350113 5.4:+76592029 MS.gene020891:CDS
TGGACTTTAGTAGTTTAAAA+GGG 0.352298 5.4:-76591324 None:intergenic
ATTATTTGTCGGAAGCGTTT+AGG 0.353184 5.4:-76592947 None:intergenic
CGCTGTTCAGGCGTAGCATC+TGG 0.360966 5.4:-76591397 None:intergenic
TTTGTAAGTGAGCCTGAAAT+TGG 0.376302 5.4:+76593482 MS.gene020891:CDS
TACCACTCGTGTGAGCAGTT+TGG 0.378780 5.4:-76592616 None:intergenic
ATGTACTAATGAAGCCTCTT+TGG 0.380444 5.4:+76594049 MS.gene020891:CDS
CCTCCTTTCATCAATACAAT+TGG 0.381731 5.4:-76589304 None:intergenic
TTACCTAAAACACCATTCAT+TGG 0.382326 5.4:-76592449 None:intergenic
CAGAATGCTGTCCAAGGAAA+TGG 0.384642 5.4:-76592027 None:intergenic
TGAAAGTTCTCCATTCTGAT+AGG 0.384878 5.4:+76590894 MS.gene020891:CDS
CGATGACAACTTCAGGTACT+TGG 0.385643 5.4:-76592919 None:intergenic
TTTATGTCAGTTGGAATCCT+TGG 0.387171 5.4:+76590417 MS.gene020891:CDS
TGGGGCTAAGGTGGGTGGCC+AGG 0.387928 5.4:-76593987 None:intergenic
TCGGTACCATACATCGTAAT+AGG 0.388024 5.4:-76591831 None:intergenic
GGATCTCCAAATGCCAGAAA+TGG 0.388575 5.4:+76594323 MS.gene020891:CDS
TTTAATTAAAGGATGTTGTT+TGG 0.394773 5.4:+76590221 MS.gene020891:CDS
TCTTATAGACAAGGATTCTT+GGG 0.395654 5.4:+76593876 MS.gene020891:CDS
TCAAAAGCAGAAGGTAGTTA+AGG 0.396948 5.4:+76590302 MS.gene020891:CDS
TGAAGAAGAGCAACTCTATA+CGG 0.397116 5.4:+76594641 MS.gene020891:CDS
TCTTGTTGGAAATTCACTTA+AGG 0.397528 5.4:+76592976 MS.gene020891:CDS
TACAGAGAATCCCTTGGAAC+TGG 0.398252 5.4:+76594093 MS.gene020891:CDS
TCGCGAACATACGGTGGAAC+TGG 0.403424 5.4:+76593404 MS.gene020891:CDS
ACATACGGTGGAACTGGAAT+AGG 0.407969 5.4:+76593410 MS.gene020891:CDS
GGTACCGATGTTCTTGATAC+TGG 0.414059 5.4:+76591846 MS.gene020891:CDS
AGCATACGCCTCCATTTCCT+TGG 0.415014 5.4:+76592016 MS.gene020891:CDS
AAAGAATTGGCAGAGATGTT+TGG 0.417574 5.4:+76594507 MS.gene020891:CDS
CGAGCAAGGGCATCTGGAAA+GGG 0.420999 5.4:+76591289 MS.gene020891:CDS
AGAATGCTTAAACTTGAATC+AGG 0.423838 5.4:+76593175 MS.gene020891:CDS
AATTGCATGTGGGAAAGAAT+TGG 0.426178 5.4:+76594494 MS.gene020891:CDS
AAGTGAATTTCCAACAAGAT+TGG 0.429542 5.4:-76592972 None:intergenic
GGGACAGTATAATGCCAATA+AGG 0.430051 5.4:-76590245 None:intergenic
ATACTGTCCCACAAGTTGTC+TGG 0.431443 5.4:+76590258 MS.gene020891:CDS
GAACAAAGTCATCAAGAATT+GGG 0.433982 5.4:-76589437 None:intergenic
TAGAGTTGCTCTTCTTCAAA+TGG 0.434245 5.4:-76594636 None:intergenic
TAAATTGATCTTGCAACATA+CGG 0.441964 5.4:-76590524 None:intergenic
GACAGCAATGGTTTGCTGAC+AGG 0.443901 5.4:-76591778 None:intergenic
CACAAGTGATGGAACATCAT+AGG 0.445281 5.4:-76591733 None:intergenic
AGCTTGGATTATCATTCCCT+TGG 0.446435 5.4:+76589466 MS.gene020891:CDS
CTGCTCATTGGGGCTAAGGT+GGG 0.446711 5.4:-76593995 None:intergenic
GTATCCATCGACATGATGTC+AGG 0.447012 5.4:+76591073 MS.gene020891:CDS
CCTTCTGCTCATTGGGGCTA+AGG 0.447909 5.4:-76593999 None:intergenic
GGATCGCCGATGACAACTTC+AGG 0.448585 5.4:-76592926 None:intergenic
GACTTTGTTCACATGAAGCT+TGG 0.449258 5.4:+76589450 MS.gene020891:CDS
GTAGCTTCAATACGCTGTTC+AGG 0.450753 5.4:-76591409 None:intergenic
TGCAGATGTCGCAAAATCTC+AGG 0.453763 5.4:+76592176 MS.gene020891:CDS
GAAGAATTTGGAGTTACAAA+AGG 0.453998 5.4:+76589380 MS.gene020891:CDS
TAGGAAACAGATGGAAAAGC+TGG 0.456035 5.4:+76593240 MS.gene020891:CDS
TCTGATCCTATTACGATGTA+TGG 0.457715 5.4:+76591825 MS.gene020891:CDS
CAAGATTGGTAATTATTTGT+CGG 0.462240 5.4:-76592958 None:intergenic
TGGAGAATATACAGAGAGTT+CGG 0.464515 5.4:+76590832 MS.gene020891:CDS
TTGAGGTGACTAGGCTAATC+CGG 0.464950 5.4:+76594445 MS.gene020891:CDS
ACCAGTAGCCTTTGAATGAC+CGG 0.467332 5.4:-76590367 None:intergenic
TCTGCTCATTGGGGCTAAGG+TGG 0.472855 5.4:-76593996 None:intergenic
CTCATTGGGGCTAAGGTGGG+TGG 0.473446 5.4:-76593992 None:intergenic
AGAATGTATTCCAGAAAACT+TGG 0.474067 5.4:+76590985 MS.gene020891:CDS
AGGTATGCTGCAAATGTTGA+TGG 0.474230 5.4:+76592559 MS.gene020891:intron
CGACAGTTTCACATGAGATC+AGG 0.474661 5.4:+76592423 MS.gene020891:CDS
ATCAAAACACTTTGCCAAAG+AGG 0.475890 5.4:-76594063 None:intergenic
TGGTGCATATTCATCTTGAA+TGG 0.477295 5.4:-76591017 None:intergenic
CATATTTACACCTTTCATGC+AGG 0.477916 5.4:+76593367 MS.gene020891:CDS
ATCCTTGTCTATAAGAATCA+TGG 0.478300 5.4:-76593869 None:intergenic
CCATGTATTGGAAGGTATCT+GGG 0.482800 5.4:+76591705 MS.gene020891:intron
GCGAGCAAGGGCATCTGGAA+AGG 0.484052 5.4:+76591288 MS.gene020891:CDS
CAAGGACAGAATGGCGTCAA+AGG 0.488603 5.4:+76593934 MS.gene020891:CDS
TTACCTCGTTCTCCATATAC+CGG 0.488691 5.4:-76594464 None:intergenic
AATCCATCTGATTGTCATCA+AGG 0.489725 5.4:-76592589 None:intergenic
CCCGGTCATTCAAAGGCTAC+TGG 0.491515 5.4:+76590366 MS.gene020891:CDS
AATGTTACATATGCTTTCCA+AGG 0.494279 5.4:-76589483 None:intergenic
AATAAATCGAATAGCTAAAG+TGG 0.498068 5.4:+76592107 MS.gene020891:CDS
ACGATATCACCTGCAGAGGT+TGG 0.499162 5.4:+76593652 MS.gene020891:CDS
CGGATTCAACATTGTATGCC+CGG 0.499645 5.4:+76590348 MS.gene020891:CDS
CCTCGACTGTTACTAGTAGT+TGG 0.500006 5.4:-76593307 None:intergenic
ACAGTCGAGGACACTGGTAT+AGG 0.500734 5.4:+76593320 MS.gene020891:CDS
TGTCCAATTGTATTGATGAA+AGG 0.501841 5.4:+76589301 MS.gene020891:CDS
GTGGCAGAAGAATAATCCTT+TGG 0.501981 5.4:+76593565 MS.gene020891:CDS
CAGCATTCTGGGCATCCTTG+GGG 0.503392 5.4:+76592040 MS.gene020891:CDS
AACAAAAGCCAGACAACTTG+TGG 0.503467 5.4:-76590266 None:intergenic
CGATATCACCTGCAGAGGTT+GGG 0.504786 5.4:+76593653 MS.gene020891:CDS
ACATCCTTCCGCAGTTGACC+AGG 0.506511 5.4:+76590608 MS.gene020891:CDS
TTACTAATGCTCTCAAACCC+TGG 0.510047 5.4:-76593598 None:intergenic
TTGGAATCCTTGGTTCTGCA+TGG 0.513364 5.4:+76590427 MS.gene020891:CDS
AGTCGTATTTGCTCAAGAAA+CGG 0.515422 5.4:+76591039 MS.gene020891:CDS
CAAAATGCATCCTATCAGAA+TGG 0.515566 5.4:-76590904 None:intergenic
AGTTCCACATCGCGAACATA+CGG 0.515602 5.4:+76593395 MS.gene020891:CDS
TACCTGTGTGGAGGGTGGTA+AGG 0.516659 5.4:+76594251 MS.gene020891:CDS
GAAGAGTCCACTTCACATCA+TGG 0.518980 5.4:+76593139 MS.gene020891:CDS
GAGCAAAACGTTAACCAAAT+CGG 0.525792 5.4:-76589523 None:intergenic
CAGACATGCCCAACCTCTGC+AGG 0.530444 5.4:-76593661 None:intergenic
GGACTTTAGTAGTTTAAAAG+GGG 0.531138 5.4:-76591323 None:intergenic
GGTGCATATTCATCTTGAAT+GGG 0.531343 5.4:-76591016 None:intergenic
AAATTGATCTTGCAACATAC+GGG 0.535060 5.4:-76590523 None:intergenic
GGCTCTCTCATCACACATAG+TGG 0.539504 5.4:-76590502 None:intergenic
CGCTACTACAGAGAATCCCT+TGG 0.539625 5.4:+76594087 MS.gene020891:CDS
TATTCATCTTGAATGGGCGC+TGG 0.540279 5.4:-76591010 None:intergenic
TCCAAATGCCAGAAATGGAC+GGG 0.542668 5.4:+76594328 MS.gene020891:CDS
CCTTTGGCCTCTGAGTTCCA+GGG 0.543146 5.4:+76593581 MS.gene020891:CDS
ATCAAGAAACAAGGACAGAA+TGG 0.546253 5.4:+76593925 MS.gene020891:CDS
CTTCAAATGTTGTTAAGTAG+TGG 0.546319 5.4:+76589327 MS.gene020891:CDS
TAAATGTCTAGTTGACCTCA+TGG 0.554358 5.4:+76593445 MS.gene020891:CDS
AGAAGCTTGTCCACAAGTGA+TGG 0.554573 5.4:-76591744 None:intergenic
TCAGCTGTCATAGCTAGTAT+TGG 0.556557 5.4:-76594552 None:intergenic
GGCCATGATTCTTATAGACA+AGG 0.556608 5.4:+76593867 MS.gene020891:CDS
TTTCAGTATGTCGACGCAGT+TGG 0.556794 5.4:+76593846 MS.gene020891:intron
CCAATTGTATTGATGAAAGG+AGG 0.556888 5.4:+76589304 MS.gene020891:CDS
AAATATATATCCAAGAAGAA+AGG 0.557028 5.4:-76592076 None:intergenic
CTATGATGTTCCATCACTTG+TGG 0.557856 5.4:+76591734 MS.gene020891:CDS
AAACAAGCATCAAAATTATG+TGG 0.560851 5.4:-76594297 None:intergenic
TTGGAAAGCATATGTAACAT+TGG 0.562808 5.4:+76589485 MS.gene020891:CDS
CCAGTAGCCTTTGAATGACC+GGG 0.563893 5.4:-76590366 None:intergenic
GTCATACACATTGACAGCAA+TGG 0.567089 5.4:-76591790 None:intergenic
TAAGCAACACCACTAGTAAG+TGG 0.568808 5.4:-76590866 None:intergenic
AAAGCAAGCAGATTGAAGAC+TGG 0.571842 5.4:-76593696 None:intergenic
ACAAAAGCCAGACAACTTGT+GGG 0.571903 5.4:-76590265 None:intergenic
ACACAAGAATAGCGAGAGCA+TGG 0.573638 5.4:-76590566 None:intergenic
CAGAAGGAGCTAAAGTCAGT+TGG 0.574474 5.4:+76594015 MS.gene020891:CDS
GAGATCAGGACTCCAATGAA+TGG 0.574560 5.4:+76592437 MS.gene020891:CDS
AAATATGCGGCTTTGAGCAT+CGG 0.576359 5.4:-76593351 None:intergenic
TTGTATGCCCGGTCATTCAA+AGG 0.577652 5.4:+76590359 MS.gene020891:CDS
AAAAGGAGAAACAGAATCTG+TGG 0.578251 5.4:+76593535 MS.gene020891:CDS
TATCAAGCTAAGATCGAGGC+AGG 0.579435 5.4:+76592671 MS.gene020891:CDS
GAACTATCAGCCTGCATGAA+AGG 0.579814 5.4:-76593377 None:intergenic
GAAAACATGAGATGCACTGC+AGG 0.579994 5.4:+76591910 MS.gene020891:CDS
AGAACATGCAATACATTGAG+TGG 0.580850 5.4:+76593209 MS.gene020891:CDS
CCTTAGCCCCAATGAGCAGA+AGG 0.581226 5.4:+76593999 MS.gene020891:CDS
CTCCAAATGCCAGAAATGGA+CGG 0.581688 5.4:+76594327 MS.gene020891:CDS
TTTGCAATCACAGGTGATGG+GGG 0.581930 5.4:+76590164 MS.gene020891:intron
TGGTTTGCTGACAGGCAAGC+TGG 0.582491 5.4:-76591770 None:intergenic
TTAGCTCCTTCTGCTCATTG+GGG 0.582725 5.4:-76594005 None:intergenic
GTCATTCAAAGGCTACTGGT+TGG 0.583595 5.4:+76590370 MS.gene020891:CDS
CAGCGTATTGAAGCTACTGT+GGG 0.584573 5.4:+76591415 MS.gene020891:CDS
ATTCAAAGGCTACTGGTTGG+CGG 0.585519 5.4:+76590373 MS.gene020891:CDS
AAGGAAGATTCAAAAGCAGA+AGG 0.587306 5.4:+76590293 MS.gene020891:CDS
ACATTGAGTGGATTTCCTGT+AGG 0.587511 5.4:+76593221 MS.gene020891:CDS
TTTCTGATACTTGCAACTCA+AGG 0.587800 5.4:+76593723 MS.gene020891:CDS
GATTTCCTGTAGGAAACAGA+TGG 0.596201 5.4:+76593231 MS.gene020891:CDS
GATGCCCAGAATGCTGTCCA+AGG 0.597141 5.4:-76592033 None:intergenic
ATCCACCTGCTCCACAAAAG+CGG 0.599663 5.4:+76590328 MS.gene020891:CDS
TGACCTTGATGACAATCAGA+TGG 0.600124 5.4:+76592586 MS.gene020891:CDS
GTTTCTTGAGCAAATACGAC+TGG 0.600912 5.4:-76591037 None:intergenic
GCAGTAGTTACCTGTGTGGA+GGG 0.602358 5.4:+76594243 MS.gene020891:CDS
GAATAGCGAGAGCATGGACA+TGG 0.603489 5.4:-76590560 None:intergenic
CAGAATCTGTGGATGAGAAG+TGG 0.603636 5.4:+76593546 MS.gene020891:CDS
AGCAAGGGCATCTGGAAAGG+GGG 0.603947 5.4:+76591291 MS.gene020891:CDS
ATGTTACATATGCTTTCCAA+GGG 0.605409 5.4:-76589482 None:intergenic
AGACAAGGATTCTTGGGACA+AGG 0.605502 5.4:+76593882 MS.gene020891:CDS
GAGCAAGGGCATCTGGAAAG+GGG 0.605827 5.4:+76591290 MS.gene020891:CDS
CTTCCCTGACATCATGTCGA+TGG 0.606250 5.4:-76591077 None:intergenic
AAATGTCTAGTTGACCTCAT+GGG 0.606651 5.4:+76593446 MS.gene020891:CDS
AAACTTGAATCAGGACATGT+CGG 0.606659 5.4:+76593184 MS.gene020891:CDS
ACAGAGAATCCCTTGGAACT+GGG 0.608161 5.4:+76594094 MS.gene020891:CDS
AGCATTCTGGGCATCCTTGG+GGG 0.608710 5.4:+76592041 MS.gene020891:CDS
CAAGTACCTGAAGTTGTCAT+CGG 0.609914 5.4:+76592920 MS.gene020891:CDS
CCCTGGAACTCAGAGGCCAA+AGG 0.610752 5.4:-76593581 None:intergenic
GCCCAAACTGCTCACACGAG+TGG 0.611642 5.4:+76592614 MS.gene020891:CDS
TCCACCGTATGTTCGCGATG+TGG 0.613281 5.4:-76593399 None:intergenic
GTGAACAGAAAAGTTGCAGA+AGG 0.613404 5.4:+76594201 MS.gene020891:CDS
AGGAAACAGATGGAAAAGCT+GGG 0.614483 5.4:+76593241 MS.gene020891:CDS
CAAGCATCAAAATTATGTGG+TGG 0.622634 5.4:-76594294 None:intergenic
CTAGTAACAGTCGAGGACAC+TGG 0.623583 5.4:+76593314 MS.gene020891:CDS
TCCACATCGCGAACATACGG+TGG 0.623794 5.4:+76593398 MS.gene020891:CDS
TATCCATCGACATGATGTCA+GGG 0.623915 5.4:+76591074 MS.gene020891:CDS
GTTACCTGGTCAACTGCGGA+AGG 0.629231 5.4:-76590612 None:intergenic
ATGCGGCTTTGAGCATCGGT+AGG 0.631149 5.4:-76593347 None:intergenic
CTTGTGTCTACATTTCACCA+TGG 0.631262 5.4:+76590582 MS.gene020891:CDS
ACAGCGTATTGAAGCTACTG+TGG 0.633680 5.4:+76591414 MS.gene020891:CDS
TAAATAACCATGCAGAACCA+AGG 0.637583 5.4:-76590434 None:intergenic
GGCAGGCAAACTAGAACTTG+AGG 0.639131 5.4:+76592688 MS.gene020891:CDS
AGCCTTACCACCCTCCACAC+AGG 0.641150 5.4:-76594253 None:intergenic
AGAGCAACTCTATACGGCAG+TGG 0.641157 5.4:+76594647 MS.gene020891:CDS
CTACTAAAGTCCAATTACCT+CGG 0.645725 5.4:+76591334 MS.gene020891:CDS
TTCTTCGGACACATTAACTG+TGG 0.646243 5.4:-76589363 None:intergenic
AATGCTGTCCAAGGAAATGG+AGG 0.646257 5.4:-76592024 None:intergenic
TCTTATATCAGTTATAAGCG+AGG 0.649465 5.4:+76592643 MS.gene020891:CDS
GATATCGTGTAACCTCAGCC+CGG 0.651457 5.4:-76593637 None:intergenic
CATCGACATGATGTCAGGGA+AGG 0.652451 5.4:+76591078 MS.gene020891:CDS
TGTTCAGGCGTAGCATCTGG+AGG 0.656731 5.4:-76591394 None:intergenic
GCATGAAAGGTGTAAATATG+CGG 0.658298 5.4:-76593364 None:intergenic
TGTCTAGTTGACCTCATGGG+AGG 0.658386 5.4:+76593449 MS.gene020891:CDS
ACTGCATCCATGATGTGAAG+TGG 0.660365 5.4:-76593146 None:intergenic
AGCAGTAGTTACCTGTGTGG+AGG 0.662067 5.4:+76594242 MS.gene020891:CDS
TTTGAGAGACCACTTACTAG+TGG 0.664415 5.4:+76590857 MS.gene020891:CDS
GAAAATGGAAACTGAGAACG+AGG 0.669396 5.4:+76590952 MS.gene020891:CDS
ACTTCATCTAGAATTGCATG+TGG 0.670385 5.4:-76592725 None:intergenic
GTAGTTACCTGTGTGGAGGG+TGG 0.673674 5.4:+76594246 MS.gene020891:CDS
CTGCGGAAGGATGTTTACCA+TGG 0.679151 5.4:-76590599 None:intergenic
ACTGGCTTACTACACGTAAG+CGG 0.680944 5.4:+76591864 MS.gene020891:CDS
TAAGCCAGTATCAAGAACAT+CGG 0.681711 5.4:-76591850 None:intergenic
ATCCAATTTCTCCTCCCATG+AGG 0.687075 5.4:-76593460 None:intergenic
TTATACGCAATCAAGAAACA+AGG 0.692490 5.4:+76593916 MS.gene020891:CDS
TTACACGATATCACCTGCAG+AGG 0.694581 5.4:+76593648 MS.gene020891:CDS
TCTCAAACCCTGGAACTCAG+AGG 0.698392 5.4:-76593588 None:intergenic
TCTCTATCAAGCTAAGATCG+AGG 0.707670 5.4:+76592667 MS.gene020891:CDS
TGGAGCAGTAGTTACCTGTG+TGG 0.714398 5.4:+76594239 MS.gene020891:CDS
GTATGTTACCTGGTCAACTG+CGG 0.716416 5.4:-76590616 None:intergenic
CCAACTACTAGTAACAGTCG+AGG 0.735761 5.4:+76593307 MS.gene020891:CDS
AATCCGGTATATGGAGAACG+AGG 0.748717 5.4:+76594461 MS.gene020891:CDS
AGCGTATTGAAGCTACTGTG+GGG 0.753444 5.4:+76591416 MS.gene020891:CDS
CAAATGTAAGTACAACACCG+AGG 0.806793 5.4:-76591351 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTATCTAGTTTAATTAA+AGG + chr5.4:76590210-76590229 MS.gene020891:CDS 10.0%
!!! ATTAATTCACTTTTTTATTT+TGG + chr5.4:76590140-76590159 MS.gene020891:intron 10.0%
!!! TTTTAATATTACACATTTTA+AGG + chr5.4:76590740-76590759 MS.gene020891:intron 10.0%
!! AAAGTTTCAAAAGTTAAATT+TGG + chr5.4:76593265-76593284 MS.gene020891:CDS 15.0%
!! AGTAATTTCAATTACATAAA+AGG - chr5.4:76592354-76592373 None:intergenic 15.0%
!! ATGTGATATTTCAATTATTT+GGG - chr5.4:76591966-76591985 None:intergenic 15.0%
!! TATGTGATATTTCAATTATT+TGG - chr5.4:76591967-76591986 None:intergenic 15.0%
!!! ATTTTTTTGCATTGTTATAT+AGG + chr5.4:76591246-76591265 MS.gene020891:intron 15.0%
!!! TATCAATAAATTTTCAAGTT+GGG - chr5.4:76594148-76594167 None:intergenic 15.0%
!! AAATATATATCCAAGAAGAA+AGG - chr5.4:76592079-76592098 None:intergenic 20.0%
!! AATTGAAGTGATAAAGTATA+AGG + chr5.4:76590768-76590787 MS.gene020891:intron 20.0%
!! TAAATGAAAAAATTGCATGT+GGG + chr5.4:76594484-76594503 MS.gene020891:CDS 20.0%
!! TAATAGATAGAAGAAAAATC+CGG + chr5.4:76593618-76593637 MS.gene020891:CDS 20.0%
!! TAATCAAGTTATTAGACTAT+AGG - chr5.4:76590039-76590058 None:intergenic 20.0%
!! TAATCTCATTAAGTTATCAT+TGG - chr5.4:76591451-76591470 None:intergenic 20.0%
!! TATTATAATAACCTAATGTC+CGG - chr5.4:76593797-76593816 None:intergenic 20.0%
!! TTTAATTAAAGGATGTTGTT+TGG + chr5.4:76590221-76590240 MS.gene020891:CDS 20.0%
!!! AAAGTAAAGTATCTAAAGAT+AGG - chr5.4:76592801-76592820 None:intergenic 20.0%
!!! AAGTAAAGTATCTAAAGATA+GGG - chr5.4:76592800-76592819 None:intergenic 20.0%
!!! ATGTCATTATTTTCTCTTAT+TGG + chr5.4:76590642-76590661 MS.gene020891:intron 20.0%
!!! ATTTAAACTACAGAACTTTT+AGG - chr5.4:76589586-76589605 None:intergenic 20.0%
!!! GTATCAATAAATTTTCAAGT+TGG - chr5.4:76594149-76594168 None:intergenic 20.0%
!!! TGTCATTATTTTCTCTTATT+GGG + chr5.4:76590643-76590662 MS.gene020891:intron 20.0%
!!! TTCATATTTAGAGTTATTCA+TGG + chr5.4:76590694-76590713 MS.gene020891:intron 20.0%
!!! TTTACTGGAAATTTTAGAAA+AGG + chr5.4:76593518-76593537 MS.gene020891:CDS 20.0%
! AAACAAGCATCAAAATTATG+TGG - chr5.4:76594300-76594319 None:intergenic 25.0%
! AACTTGATTATGTAAAGTAG+TGG + chr5.4:76590049-76590068 MS.gene020891:intron 25.0%
! AATAAATCGAATAGCTAAAG+TGG + chr5.4:76592107-76592126 MS.gene020891:CDS 25.0%
! AATAGATAGAAGAAAAATCC+GGG + chr5.4:76593619-76593638 MS.gene020891:CDS 25.0%
! AATGAAGAATGCAAAAAATG+TGG + chr5.4:76594591-76594610 MS.gene020891:CDS 25.0%
! ATGAAGAATGCAAAAAATGT+GGG + chr5.4:76594592-76594611 MS.gene020891:CDS 25.0%
! ATGTAACTAATTAAGTGATG+TGG - chr5.4:76591530-76591549 None:intergenic 25.0%
! CAAATAATTACCAATCTTGT+TGG + chr5.4:76592962-76592981 MS.gene020891:CDS 25.0%
! CAACATTCTTAAAAGAAATG+AGG - chr5.4:76589689-76589708 None:intergenic 25.0%
! GTAAATGAAAAAATTGCATG+TGG + chr5.4:76594483-76594502 MS.gene020891:CDS 25.0%
! TAAATTGATCTTGCAACATA+CGG - chr5.4:76590527-76590546 None:intergenic 25.0%
! TGAAAAGAATGTTATGATTC+TGG - chr5.4:76589929-76589948 None:intergenic 25.0%
! TGGACTTTAGTAGTTTAAAA+GGG - chr5.4:76591327-76591346 None:intergenic 25.0%
! TGTAAATTAGGATGATTCAT+AGG - chr5.4:76589637-76589656 None:intergenic 25.0%
! TTATAATAGATAATCCCATC+TGG + chr5.4:76592492-76592511 MS.gene020891:intron 25.0%
! TTGGACTTTAGTAGTTTAAA+AGG - chr5.4:76591328-76591347 None:intergenic 25.0%
! TTTCAGTTCATTCACAATAA+AGG + chr5.4:76593080-76593099 MS.gene020891:intron 25.0%
!! ATCTCAGGTTAGATATATTT+TGG + chr5.4:76592191-76592210 MS.gene020891:intron 25.0%
!! ATTGATACACAAACGAATTT+TGG + chr5.4:76594161-76594180 MS.gene020891:CDS 25.0%
!! CAAGATTGGTAATTATTTGT+CGG - chr5.4:76592961-76592980 None:intergenic 25.0%
!! CTGTTTTCAAATAATTTTCC+AGG + chr5.4:76592539-76592558 MS.gene020891:intron 25.0%
!! GTCATTATTTTCTCTTATTG+GGG + chr5.4:76590644-76590663 MS.gene020891:intron 25.0%
!! TCTCAGGTTAGATATATTTT+GGG + chr5.4:76592192-76592211 MS.gene020891:intron 25.0%
!! TGTTTGGTAACATTTCTTAT+TGG + chr5.4:76594523-76594542 MS.gene020891:CDS 25.0%
!! TTATGTTCTCTATACCTTTT+TGG + chr5.4:76592866-76592885 MS.gene020891:intron 25.0%
!! TTTTGTAACTCCAAATTCTT+CGG - chr5.4:76589381-76589400 None:intergenic 25.0%
!! TTTTTGCATTGTTATATAGG+AGG + chr5.4:76591249-76591268 MS.gene020891:intron 25.0%
!!! AGGTAATGTGTTAGTTTTTT+TGG + chr5.4:76593743-76593762 MS.gene020891:intron 25.0%
!!! ATTCTAGAATAAAGTACGAT+TGG - chr5.4:76590007-76590026 None:intergenic 25.0%
!!! ATTCTGGTTTACAAATTCAA+AGG - chr5.4:76589913-76589932 None:intergenic 25.0%
!!! CTAGTTATTTTTATGTCAGT+TGG + chr5.4:76590408-76590427 MS.gene020891:CDS 25.0%
!!! TAATTTTGATGCTTGTTTCA+TGG + chr5.4:76594302-76594321 MS.gene020891:CDS 25.0%
!!! TATATTTCCATTTTTTTGCC+AGG + chr5.4:76591989-76592008 MS.gene020891:intron 25.0%
!!! TTTAAATTGTTGATTCTGCT+TGG + chr5.4:76589599-76589618 MS.gene020891:intron 25.0%
!!! TTTGTTATTACCTTTCTTCT+TGG + chr5.4:76592066-76592085 MS.gene020891:CDS 25.0%
AAAATTCAGATCAGTTGTAC+CGG + chr5.4:76593775-76593794 MS.gene020891:intron 30.0%
AAATTGATCTTGCAACATAC+GGG - chr5.4:76590526-76590545 None:intergenic 30.0%
AAGTGAATTTCCAACAAGAT+TGG - chr5.4:76592975-76592994 None:intergenic 30.0%
AATCTTCAAACTTCTAGCAA+GGG - chr5.4:76589890-76589909 None:intergenic 30.0%
AATGTTACATATGCTTTCCA+AGG - chr5.4:76589486-76589505 None:intergenic 30.0%
AGAATGCTTAAACTTGAATC+AGG + chr5.4:76593175-76593194 MS.gene020891:CDS 30.0%
AGAATGTATTCCAGAAAACT+TGG + chr5.4:76590985-76591004 MS.gene020891:CDS 30.0%
AGATTCAGATGAAATAAGCT+TGG + chr5.4:76591163-76591182 MS.gene020891:intron 30.0%
ATCCTTGTCTATAAGAATCA+TGG - chr5.4:76593872-76593891 None:intergenic 30.0%
ATGTTACATATGCTTTCCAA+GGG - chr5.4:76589485-76589504 None:intergenic 30.0%
CATTAAATTGCTCACATATC+AGG + chr5.4:76591208-76591227 MS.gene020891:intron 30.0%
CTTCAAATGTTGTTAAGTAG+TGG + chr5.4:76589327-76589346 MS.gene020891:CDS 30.0%
GAACAAAGTCATCAAGAATT+GGG - chr5.4:76589440-76589459 None:intergenic 30.0%
GACATTGTAAAAATACTCCA+CGG - chr5.4:76591561-76591580 None:intergenic 30.0%
GGACTTTAGTAGTTTAAAAG+GGG - chr5.4:76591326-76591345 None:intergenic 30.0%
GGTCAATCACTATGTAAATT+AGG - chr5.4:76589649-76589668 None:intergenic 30.0%
GTTTGACTGCAGAAAATATT+TGG + chr5.4:76590812-76590831 MS.gene020891:intron 30.0%
TCTTATAGACAAGGATTCTT+GGG + chr5.4:76593876-76593895 MS.gene020891:CDS 30.0%
TCTTATATCAGTTATAAGCG+AGG + chr5.4:76592643-76592662 MS.gene020891:CDS 30.0%
TCTTGTTGGAAATTCACTTA+AGG + chr5.4:76592976-76592995 MS.gene020891:CDS 30.0%
TGAACAAAGTCATCAAGAAT+TGG - chr5.4:76589441-76589460 None:intergenic 30.0%
TGGTTGGACAATTAAGAAAA+TGG + chr5.4:76590937-76590956 MS.gene020891:CDS 30.0%
TTACAAATGCATGTGATACA+CGG - chr5.4:76591615-76591634 None:intergenic 30.0%
TTACCTAAAACACCATTCAT+TGG - chr5.4:76592452-76592471 None:intergenic 30.0%
TTATACGCAATCAAGAAACA+AGG + chr5.4:76593916-76593935 MS.gene020891:CDS 30.0%
TTCTTATAGACAAGGATTCT+TGG + chr5.4:76593875-76593894 MS.gene020891:CDS 30.0%
! CTCAGGTTAGATATATTTTG+GGG + chr5.4:76592193-76592212 MS.gene020891:intron 30.0%
! GAAGAATTTGGAGTTACAAA+AGG + chr5.4:76589380-76589399 MS.gene020891:CDS 30.0%
! TGTCCAATTGTATTGATGAA+AGG + chr5.4:76589301-76589320 MS.gene020891:CDS 30.0%
! TTGGAAAGCATATGTAACAT+TGG + chr5.4:76589485-76589504 MS.gene020891:CDS 30.0%
! TTTTTACAATGTCGGTGTAT+TGG + chr5.4:76591568-76591587 MS.gene020891:intron 30.0%
!! GAAAAAGTACTTCCAATTTC+AGG - chr5.4:76593497-76593516 None:intergenic 30.0%
!! GTGGAGTATTTTTACAATGT+CGG + chr5.4:76591560-76591579 MS.gene020891:intron 30.0%
!!! GGAAGTACTTTTTCATTTAC+TGG + chr5.4:76593503-76593522 MS.gene020891:CDS 30.0%
!!! TATTTTGGTTTTGCAATCAC+AGG + chr5.4:76590155-76590174 MS.gene020891:intron 30.0%
AAAAGGAGAAACAGAATCTG+TGG + chr5.4:76593535-76593554 MS.gene020891:CDS 35.0%
AAACTTGAATCAGGACATGT+CGG + chr5.4:76593184-76593203 MS.gene020891:CDS 35.0%
AAAGAATTGGCAGAGATGTT+TGG + chr5.4:76594507-76594526 MS.gene020891:CDS 35.0%
AAAGAGAAACCAATCCTTTG+AGG - chr5.4:76592390-76592409 None:intergenic 35.0%
AAATGTCTAGTTGACCTCAT+GGG + chr5.4:76593446-76593465 MS.gene020891:CDS 35.0%
AAGGAAGATTCAAAAGCAGA+AGG + chr5.4:76590293-76590312 MS.gene020891:CDS 35.0%
AATCCATCTGATTGTCATCA+AGG - chr5.4:76592592-76592611 None:intergenic 35.0%
AATCCTAACATTCTTGCCAT+CGG - chr5.4:76592252-76592271 None:intergenic 35.0%
AATTGCATGTGGGAAAGAAT+TGG + chr5.4:76594494-76594513 MS.gene020891:CDS 35.0%
AGAACATGCAATACATTGAG+TGG + chr5.4:76593209-76593228 MS.gene020891:CDS 35.0%
AGAATGCAAAAAATGTGGGA+TGG + chr5.4:76594596-76594615 MS.gene020891:CDS 35.0%
AGTCGTATTTGCTCAAGAAA+CGG + chr5.4:76591039-76591058 MS.gene020891:CDS 35.0%
ATCAAAACACTTTGCCAAAG+AGG - chr5.4:76594066-76594085 None:intergenic 35.0%
ATCAAGAAACAAGGACAGAA+TGG + chr5.4:76593925-76593944 MS.gene020891:CDS 35.0%
ATGACATTGAGTATGTTACC+TGG - chr5.4:76590629-76590648 None:intergenic 35.0%
ATGTACTAATGAAGCCTCTT+TGG + chr5.4:76594049-76594068 MS.gene020891:CDS 35.0%
ATTAATTACCCGTCCATTTC+TGG - chr5.4:76594339-76594358 None:intergenic 35.0%
ATTGGATGTAATGTGTGTGT+TGG + chr5.4:76591586-76591605 MS.gene020891:intron 35.0%
CAAAATGCATCCTATCAGAA+TGG - chr5.4:76590907-76590926 None:intergenic 35.0%
CAAGCATCAAAATTATGTGG+TGG - chr5.4:76594297-76594316 None:intergenic 35.0%
CATATTTACACCTTTCATGC+AGG + chr5.4:76593367-76593386 MS.gene020891:CDS 35.0%
CCTCCTTTCATCAATACAAT+TGG - chr5.4:76589307-76589326 None:intergenic 35.0%
CTACTAAAGTCCAATTACCT+CGG + chr5.4:76591334-76591353 MS.gene020891:CDS 35.0%
GAATCTTCAAACTTCTAGCA+AGG - chr5.4:76589891-76589910 None:intergenic 35.0%
GAGCAAAACGTTAACCAAAT+CGG - chr5.4:76589526-76589545 None:intergenic 35.0%
GAGGCATATAAGATGTCTAA+AGG - chr5.4:76589670-76589689 None:intergenic 35.0%
GGTGCATATTCATCTTGAAT+GGG - chr5.4:76591019-76591038 None:intergenic 35.0%
GTAAAAACTCTACCTTTCCA+CGG - chr5.4:76589548-76589567 None:intergenic 35.0%
GTTAATGTGTCCGAAGAATT+TGG + chr5.4:76589368-76589387 MS.gene020891:CDS 35.0%
GTTGTTATCCATGTATTGGA+AGG + chr5.4:76591697-76591716 MS.gene020891:intron 35.0%
TAAATAACCATGCAGAACCA+AGG - chr5.4:76590437-76590456 None:intergenic 35.0%
TAAATGTCTAGTTGACCTCA+TGG + chr5.4:76593445-76593464 MS.gene020891:CDS 35.0%
TAAGCCAGTATCAAGAACAT+CGG - chr5.4:76591853-76591872 None:intergenic 35.0%
TAATTCTCTCTTGACCTCAA+AGG + chr5.4:76592373-76592392 MS.gene020891:intron 35.0%
TAGAGTTGCTCTTCTTCAAA+TGG - chr5.4:76594639-76594658 None:intergenic 35.0%
TATACACTGTCACTGTAAAG+AGG - chr5.4:76591640-76591659 None:intergenic 35.0%
TCAAAAGCAGAAGGTAGTTA+AGG + chr5.4:76590302-76590321 MS.gene020891:CDS 35.0%
TCTGAAAAGTCCGATGAAAA+AGG + chr5.4:76592761-76592780 MS.gene020891:CDS 35.0%
TCTGATCCTATTACGATGTA+TGG + chr5.4:76591825-76591844 MS.gene020891:CDS 35.0%
TGAAAGTTCTCCATTCTGAT+AGG + chr5.4:76590894-76590913 MS.gene020891:CDS 35.0%
TGAAGAAGAGCAACTCTATA+CGG + chr5.4:76594641-76594660 MS.gene020891:CDS 35.0%
TGACGACTGTCAATAACATA+AGG - chr5.4:76591130-76591149 None:intergenic 35.0%
TGATTCTGCTTGGAATTTGT+TGG + chr5.4:76589609-76589628 MS.gene020891:intron 35.0%
TGCAACAAAATTGTTTCCGA+TGG + chr5.4:76592233-76592252 MS.gene020891:intron 35.0%
TGGAGAATATACAGAGAGTT+CGG + chr5.4:76590832-76590851 MS.gene020891:CDS 35.0%
TGGTGCATATTCATCTTGAA+TGG - chr5.4:76591020-76591039 None:intergenic 35.0%
TTGTAAAAATACTCCACGGT+AGG - chr5.4:76591557-76591576 None:intergenic 35.0%
TTTATGTCAGTTGGAATCCT+TGG + chr5.4:76590417-76590436 MS.gene020891:CDS 35.0%
TTTCTGATACTTGCAACTCA+AGG + chr5.4:76593723-76593742 MS.gene020891:CDS 35.0%
TTTGTAAGTGAGCCTGAAAT+TGG + chr5.4:76593482-76593501 MS.gene020891:CDS 35.0%
TTTGTACCCTCCAATTATCT+CGG + chr5.4:76592823-76592842 MS.gene020891:intron 35.0%
! ACTCCAATGAATGGTGTTTT+AGG + chr5.4:76592446-76592465 MS.gene020891:CDS 35.0%
! ACTTCATCTAGAATTGCATG+TGG - chr5.4:76592728-76592747 None:intergenic 35.0%
! CCAATTGTATTGATGAAAGG+AGG + chr5.4:76589304-76589323 MS.gene020891:CDS 35.0%
! CTTTCCAAAGATTTTTCTCC+TGG + chr5.4:76593969-76593988 MS.gene020891:CDS 35.0%
! GATACACAAACGAATTTTGG+TGG + chr5.4:76594164-76594183 MS.gene020891:CDS 35.0%
! GCATGAAAGGTGTAAATATG+CGG - chr5.4:76593367-76593386 None:intergenic 35.0%
! GTGTGTTGTTATCCATGTAT+TGG + chr5.4:76591693-76591712 MS.gene020891:intron 35.0%
! TCTTACATGTTGCAGTTTTG+AGG + chr5.4:76594428-76594447 MS.gene020891:intron 35.0%
! TGAGAATATTTTGCGAGCAA+GGG + chr5.4:76591276-76591295 MS.gene020891:CDS 35.0%
! TGGTTGGTATACTGTAAAAC+AGG - chr5.4:76589785-76589804 None:intergenic 35.0%
! TTCTAGCAAGGGCATAAAAA+TGG - chr5.4:76589879-76589898 None:intergenic 35.0%
!! ATTATTTGTCGGAAGCGTTT+AGG - chr5.4:76592950-76592969 None:intergenic 35.0%
!! CACCTCAATTCCTTTTTCAT+CGG - chr5.4:76592774-76592793 None:intergenic 35.0%
!! TGTTTTTGTCTCGATTCATC+TGG + chr5.4:76593106-76593125 MS.gene020891:CDS 35.0%
!! TTGGTTCTGCATGGTTATTT+AGG + chr5.4:76590436-76590455 MS.gene020891:CDS 35.0%
!!! TGTCTGGCTTTTGTTTACTA+AGG + chr5.4:76590274-76590293 MS.gene020891:CDS 35.0%
AAAGCAAGCAGATTGAAGAC+TGG - chr5.4:76593699-76593718 None:intergenic 40.0%
AACAAAAGCCAGACAACTTG+TGG - chr5.4:76590269-76590288 None:intergenic 40.0%
AAGTACAACACCGAGGTAAT+TGG - chr5.4:76591347-76591366 None:intergenic 40.0%
ACAAAAGCCAGACAACTTGT+GGG - chr5.4:76590268-76590287 None:intergenic 40.0%
ACCAGTAGTAATGCATCGTA+TGG + chr5.4:76589840-76589859 MS.gene020891:intron 40.0%
AGACTGAATGCCGAGATAAT+TGG - chr5.4:76592836-76592855 None:intergenic 40.0%
AGCTTGGATTATCATTCCCT+TGG + chr5.4:76589466-76589485 MS.gene020891:CDS 40.0%
AGGAAACAGATGGAAAAGCT+GGG + chr5.4:76593241-76593260 MS.gene020891:CDS 40.0%
AGGTATGCTGCAAATGTTGA+TGG + chr5.4:76592559-76592578 MS.gene020891:intron 40.0%
ATCAACATTTGCAGCATACC+TGG - chr5.4:76592560-76592579 None:intergenic 40.0%
ATTTCCTTGGACAGCATTCT+GGG + chr5.4:76592029-76592048 MS.gene020891:CDS 40.0%
CAAATGTAAGTACAACACCG+AGG - chr5.4:76591354-76591373 None:intergenic 40.0%
CAAGTACCTGAAGTTGTCAT+CGG + chr5.4:76592920-76592939 MS.gene020891:CDS 40.0%
CCAACTGTACTCAACCAAAA+AGG - chr5.4:76592883-76592902 None:intergenic 40.0%
CTATGATGTTCCATCACTTG+TGG + chr5.4:76591734-76591753 MS.gene020891:CDS 40.0%
CTTGTGTCTACATTTCACCA+TGG + chr5.4:76590582-76590601 MS.gene020891:CDS 40.0%
GAAAATGGAAACTGAGAACG+AGG + chr5.4:76590952-76590971 MS.gene020891:CDS 40.0%
GACTTTGTTCACATGAAGCT+TGG + chr5.4:76589450-76589469 MS.gene020891:CDS 40.0%
GATTTCCTGTAGGAAACAGA+TGG + chr5.4:76593231-76593250 MS.gene020891:CDS 40.0%
GCTTGAACCTGGCAAAAAAA+TGG - chr5.4:76591999-76592018 None:intergenic 40.0%
GGCCATGATTCTTATAGACA+AGG + chr5.4:76593867-76593886 MS.gene020891:CDS 40.0%
GGGACAGTATAATGCCAATA+AGG - chr5.4:76590248-76590267 None:intergenic 40.0%
GGTAATAACAAATACCCCCA+AGG - chr5.4:76592058-76592077 None:intergenic 40.0%
GTCATACACATTGACAGCAA+TGG - chr5.4:76591793-76591812 None:intergenic 40.0%
GTCCGATGAAAAAGGAATTG+AGG + chr5.4:76592769-76592788 MS.gene020891:CDS 40.0%
GTGAACAGAAAAGTTGCAGA+AGG + chr5.4:76594201-76594220 MS.gene020891:CDS 40.0%
GTGGCAGAAGAATAATCCTT+TGG + chr5.4:76593565-76593584 MS.gene020891:CDS 40.0%
GTTTCTTGAGCAAATACGAC+TGG - chr5.4:76591040-76591059 None:intergenic 40.0%
TAAGCAACACCACTAGTAAG+TGG - chr5.4:76590869-76590888 None:intergenic 40.0%
TAGGAAACAGATGGAAAAGC+TGG + chr5.4:76593240-76593259 MS.gene020891:CDS 40.0%
TAGTTACATTCATCCTACCG+TGG + chr5.4:76591541-76591560 MS.gene020891:intron 40.0%
TATCCATCGACATGATGTCA+GGG + chr5.4:76591074-76591093 MS.gene020891:CDS 40.0%
TCAGCTGTCATAGCTAGTAT+TGG - chr5.4:76594555-76594574 None:intergenic 40.0%
TCCATACGATGCATTACTAC+TGG - chr5.4:76589844-76589863 None:intergenic 40.0%
TCGGTACCATACATCGTAAT+AGG - chr5.4:76591834-76591853 None:intergenic 40.0%
TCTCTATCAAGCTAAGATCG+AGG + chr5.4:76592667-76592686 MS.gene020891:CDS 40.0%
TGAATGCCGAGATAATTGGA+GGG - chr5.4:76592832-76592851 None:intergenic 40.0%
TTACCTCGTTCTCCATATAC+CGG - chr5.4:76594467-76594486 None:intergenic 40.0%
TTACTAATGCTCTCAAACCC+TGG - chr5.4:76593601-76593620 None:intergenic 40.0%
TTCTTCGGACACATTAACTG+TGG - chr5.4:76589366-76589385 None:intergenic 40.0%
TTTCCGATGGCAAGAATGTT+AGG + chr5.4:76592246-76592265 MS.gene020891:intron 40.0%
TTTGAGAGACCACTTACTAG+TGG + chr5.4:76590857-76590876 MS.gene020891:CDS 40.0%
! ACATTGAGTGGATTTCCTGT+AGG + chr5.4:76593221-76593240 MS.gene020891:CDS 40.0%
! ACGTAAGCGGTCTAGATTTT+GGG + chr5.4:76591877-76591896 MS.gene020891:CDS 40.0%
! ACTTTGAGTTTGTCGAAGCT+CGG + chr5.4:76589806-76589825 MS.gene020891:intron 40.0%
! CACAAGTGATGGAACATCAT+AGG - chr5.4:76591736-76591755 None:intergenic 40.0%
! CTTTTCCATCTGTTTCCTAC+AGG - chr5.4:76593239-76593258 None:intergenic 40.0%
! GGATGTTGTTTGGTCCTTAT+TGG + chr5.4:76590231-76590250 MS.gene020891:CDS 40.0%
! GTGAGAATATTTTGCGAGCA+AGG + chr5.4:76591275-76591294 MS.gene020891:CDS 40.0%
! GTTTTGCAATCACAGGTGAT+GGG + chr5.4:76590162-76590181 MS.gene020891:intron 40.0%
! TGACCTTGATGACAATCAGA+TGG + chr5.4:76592586-76592605 MS.gene020891:CDS 40.0%
! TGCATCTCATGTTTTCGTAG+TGG - chr5.4:76591906-76591925 None:intergenic 40.0%
! TTGTTTTCTCCCAGTTCCAA+GGG - chr5.4:76594106-76594125 None:intergenic 40.0%
! TTTAGCTCCTTCTGCTCATT+GGG - chr5.4:76594009-76594028 None:intergenic 40.0%
! TTTTGCAATCACAGGTGATG+GGG + chr5.4:76590163-76590182 MS.gene020891:intron 40.0%
!! AAATATGCGGCTTTGAGCAT+CGG - chr5.4:76593354-76593373 None:intergenic 40.0%
!! ATCATCTCTTTTAGCTGCTG+CGG + chr5.4:76593022-76593041 MS.gene020891:intron 40.0%
!! ATGCATTTTGAGAAGCAGCA+TGG + chr5.4:76590917-76590936 MS.gene020891:CDS 40.0%
!! ATTTTGAGAAGCAGCATGGT+TGG + chr5.4:76590921-76590940 MS.gene020891:CDS 40.0%
!! CAATGTTGAATCCGCTTTTG+TGG - chr5.4:76590342-76590361 None:intergenic 40.0%
!! CCATGTATTGGAAGGTATCT+GGG + chr5.4:76591705-76591724 MS.gene020891:intron 40.0%
!! GAAGGTGTTCTGCGAAAATA+TGG + chr5.4:76594219-76594238 MS.gene020891:CDS 40.0%
!! TCCATGTATTGGAAGGTATC+TGG + chr5.4:76591704-76591723 MS.gene020891:intron 40.0%
!! TTTGTTTTCTCCCAGTTCCA+AGG - chr5.4:76594107-76594126 None:intergenic 40.0%
!!! CCTTTTTGGTTGAGTACAGT+TGG + chr5.4:76592880-76592899 MS.gene020891:intron 40.0%
AATATGAACTAGCAGACCCG+AGG - chr5.4:76590675-76590694 None:intergenic 45.0%
AATCCGGTATATGGAGAACG+AGG + chr5.4:76594461-76594480 MS.gene020891:CDS 45.0%
AATGCTGTCCAAGGAAATGG+AGG - chr5.4:76592027-76592046 None:intergenic 45.0%
ACACAAGAATAGCGAGAGCA+TGG - chr5.4:76590569-76590588 None:intergenic 45.0%
ACAGAGAATCCCTTGGAACT+GGG + chr5.4:76594094-76594113 MS.gene020891:CDS 45.0%
ACAGCGTATTGAAGCTACTG+TGG + chr5.4:76591414-76591433 MS.gene020891:CDS 45.0%
ACATACGGTGGAACTGGAAT+AGG + chr5.4:76593410-76593429 MS.gene020891:CDS 45.0%
ACCAGTAGCCTTTGAATGAC+CGG - chr5.4:76590370-76590389 None:intergenic 45.0%
ACTGCATCCATGATGTGAAG+TGG - chr5.4:76593149-76593168 None:intergenic 45.0%
AGAAGCTTGTCCACAAGTGA+TGG - chr5.4:76591747-76591766 None:intergenic 45.0%
AGACAAGGATTCTTGGGACA+AGG + chr5.4:76593882-76593901 MS.gene020891:CDS 45.0%
AGCGTATTGAAGCTACTGTG+GGG + chr5.4:76591416-76591435 MS.gene020891:CDS 45.0%
AGTTCCACATCGCGAACATA+CGG + chr5.4:76593395-76593414 MS.gene020891:CDS 45.0%
ATACTGTCCCACAAGTTGTC+TGG + chr5.4:76590258-76590277 MS.gene020891:CDS 45.0%
ATCCAATTTCTCCTCCCATG+AGG - chr5.4:76593463-76593482 None:intergenic 45.0%
CAGAAGGAGCTAAAGTCAGT+TGG + chr5.4:76594015-76594034 MS.gene020891:CDS 45.0%
CAGAATCTGTGGATGAGAAG+TGG + chr5.4:76593546-76593565 MS.gene020891:CDS 45.0%
CAGAATGCTGTCCAAGGAAA+TGG - chr5.4:76592030-76592049 None:intergenic 45.0%
CAGCGTATTGAAGCTACTGT+GGG + chr5.4:76591415-76591434 MS.gene020891:CDS 45.0%
CATTCAACTCCACACCAATG+TGG - chr5.4:76589727-76589746 None:intergenic 45.0%
CATTTCCTTGGACAGCATTC+TGG + chr5.4:76592028-76592047 MS.gene020891:CDS 45.0%
CCAACTACTAGTAACAGTCG+AGG + chr5.4:76593307-76593326 MS.gene020891:CDS 45.0%
CCCAGATACCTTCCAATACA+TGG - chr5.4:76591708-76591727 None:intergenic 45.0%
CCTCGACTGTTACTAGTAGT+TGG - chr5.4:76593310-76593329 None:intergenic 45.0%
CGACAAACTCAAAGTGTGGT+TGG - chr5.4:76589801-76589820 None:intergenic 45.0%
CGACAGTTTCACATGAGATC+AGG + chr5.4:76592423-76592442 MS.gene020891:CDS 45.0%
CGATGACAACTTCAGGTACT+TGG - chr5.4:76592922-76592941 None:intergenic 45.0%
CGGATTCAACATTGTATGCC+CGG + chr5.4:76590348-76590367 MS.gene020891:CDS 45.0%
CTCCAAATGCCAGAAATGGA+CGG + chr5.4:76594327-76594346 MS.gene020891:CDS 45.0%
CTCTCTTGACCTCAAAGGAT+TGG + chr5.4:76592378-76592397 MS.gene020891:intron 45.0%
CTGAATGCCGAGATAATTGG+AGG - chr5.4:76592833-76592852 None:intergenic 45.0%
GAAAACATGAGATGCACTGC+AGG + chr5.4:76591910-76591929 MS.gene020891:CDS 45.0%
GAACTATCAGCCTGCATGAA+AGG - chr5.4:76593380-76593399 None:intergenic 45.0%
GAAGAGTCCACTTCACATCA+TGG + chr5.4:76593139-76593158 MS.gene020891:CDS 45.0%
GACTAGGCTAATCCGGTATA+TGG + chr5.4:76594452-76594471 MS.gene020891:CDS 45.0%
GAGATCAGGACTCCAATGAA+TGG + chr5.4:76592437-76592456 MS.gene020891:CDS 45.0%
GATCAGTTGTACCGGACATT+AGG + chr5.4:76593783-76593802 MS.gene020891:intron 45.0%
GCTTCGACAAACTCAAAGTG+TGG - chr5.4:76589805-76589824 None:intergenic 45.0%
GGATCTCCAAATGCCAGAAA+TGG + chr5.4:76594323-76594342 MS.gene020891:CDS 45.0%
GTAGCTTCAATACGCTGTTC+AGG - chr5.4:76591412-76591431 None:intergenic 45.0%
GTATCCATCGACATGATGTC+AGG + chr5.4:76591073-76591092 MS.gene020891:CDS 45.0%
GTATGTTACCTGGTCAACTG+CGG - chr5.4:76590619-76590638 None:intergenic 45.0%
GTCATTCAAAGGCTACTGGT+TGG + chr5.4:76590370-76590389 MS.gene020891:CDS 45.0%
GTGATGTGGCAACACATCAT+AGG - chr5.4:76591516-76591535 None:intergenic 45.0%
GTGCATGTTTGCTTCCACAT+TGG + chr5.4:76589710-76589729 MS.gene020891:intron 45.0%
GTGGCCAGGAGAAAAATCTT+TGG - chr5.4:76593976-76593995 None:intergenic 45.0%
GTGTGATAGCAAGCTAAGAG+AGG - chr5.4:76591108-76591127 None:intergenic 45.0%
TACAGAGAATCCCTTGGAAC+TGG + chr5.4:76594093-76594112 MS.gene020891:CDS 45.0%
TAGAAGAAAAATCCGGGCTG+AGG + chr5.4:76593625-76593644 MS.gene020891:CDS 45.0%
TATCAAGCTAAGATCGAGGC+AGG + chr5.4:76592671-76592690 MS.gene020891:CDS 45.0%
TATTCATCTTGAATGGGCGC+TGG - chr5.4:76591013-76591032 None:intergenic 45.0%
TCCAAATGCCAGAAATGGAC+GGG + chr5.4:76594328-76594347 MS.gene020891:CDS 45.0%
TGCAGATGTCGCAAAATCTC+AGG + chr5.4:76592176-76592195 MS.gene020891:CDS 45.0%
TGTTTGCTTCCACATTGGTG+TGG + chr5.4:76589715-76589734 MS.gene020891:intron 45.0%
TTACACGATATCACCTGCAG+AGG + chr5.4:76593648-76593667 MS.gene020891:CDS 45.0%
TTAGCTCCTTCTGCTCATTG+GGG - chr5.4:76594008-76594027 None:intergenic 45.0%
TTGAGGTGACTAGGCTAATC+CGG + chr5.4:76594445-76594464 MS.gene020891:CDS 45.0%
TTGGTGTGGAGTTGAATGTG+CGG + chr5.4:76589729-76589748 MS.gene020891:intron 45.0%
TTGTATGCCCGGTCATTCAA+AGG + chr5.4:76590359-76590378 MS.gene020891:CDS 45.0%
TTTCAGTATGTCGACGCAGT+TGG + chr5.4:76593846-76593865 MS.gene020891:intron 45.0%
! ACTGGCTTACTACACGTAAG+CGG + chr5.4:76591864-76591883 MS.gene020891:CDS 45.0%
! ATTCAAAGGCTACTGGTTGG+CGG + chr5.4:76590373-76590392 MS.gene020891:CDS 45.0%
! CACGTAAGCGGTCTAGATTT+TGG + chr5.4:76591876-76591895 MS.gene020891:CDS 45.0%
! CGTAAGCGGTCTAGATTTTG+GGG + chr5.4:76591878-76591897 MS.gene020891:CDS 45.0%
! CTCTGCACTTTTGTCCGATT+TGG + chr5.4:76589509-76589528 MS.gene020891:CDS 45.0%
! CTTTAGCTCCTTCTGCTCAT+TGG - chr5.4:76594010-76594029 None:intergenic 45.0%
! GCGTCGACATACTGAAAGAA+TGG - chr5.4:76593843-76593862 None:intergenic 45.0%
! GGTTTTGCAATCACAGGTGA+TGG + chr5.4:76590161-76590180 MS.gene020891:intron 45.0%
! TAACGTTTTGCTCCGTGGAA+AGG + chr5.4:76589533-76589552 MS.gene020891:CDS 45.0%
! TTGGTTAACGTTTTGCTCCG+TGG + chr5.4:76589528-76589547 MS.gene020891:CDS 45.0%
! TTTGCAATCACAGGTGATGG+GGG + chr5.4:76590164-76590183 MS.gene020891:intron 45.0%
!! CCAACAAGTGTTGACCAGAT+GGG - chr5.4:76592509-76592528 None:intergenic 45.0%
!! CTCTTATTGGGGTATTGCCT+CGG + chr5.4:76590655-76590674 MS.gene020891:intron 45.0%
!! GGTACCGATGTTCTTGATAC+TGG + chr5.4:76591846-76591865 MS.gene020891:CDS 45.0%
!! TCTTATTGGGGTATTGCCTC+GGG + chr5.4:76590656-76590675 MS.gene020891:intron 45.0%
!! TTGGAATCCTTGGTTCTGCA+TGG + chr5.4:76590427-76590446 MS.gene020891:CDS 45.0%
!!! GTTGCAGTTTTGAGGTGACT+AGG + chr5.4:76594436-76594455 MS.gene020891:intron 45.0%
ACAGCATTCTGGGCATCCTT+GGG + chr5.4:76592039-76592058 MS.gene020891:CDS 50.0%
ACAGTCGAGGACACTGGTAT+AGG + chr5.4:76593320-76593339 MS.gene020891:CDS 50.0%
ACCACTCGTGTGAGCAGTTT+GGG - chr5.4:76592618-76592637 None:intergenic 50.0%
ACGATATCACCTGCAGAGGT+TGG + chr5.4:76593652-76593671 MS.gene020891:CDS 50.0%
AGAGCAACTCTATACGGCAG+TGG + chr5.4:76594647-76594666 MS.gene020891:CDS 50.0%
AGCAGTAGTTACCTGTGTGG+AGG + chr5.4:76594242-76594261 MS.gene020891:CDS 50.0%
AGCATACGCCTCCATTTCCT+TGG + chr5.4:76592016-76592035 MS.gene020891:CDS 50.0%
ATCCACCTGCTCCACAAAAG+CGG + chr5.4:76590328-76590347 MS.gene020891:CDS 50.0%
CAAGGACAGAATGGCGTCAA+AGG + chr5.4:76593934-76593953 MS.gene020891:CDS 50.0%
CATCGACATGATGTCAGGGA+AGG + chr5.4:76591078-76591097 MS.gene020891:CDS 50.0%
CCAGTAGCCTTTGAATGACC+GGG - chr5.4:76590369-76590388 None:intergenic 50.0%
CCCATCTGGTCAACACTTGT+TGG + chr5.4:76592506-76592525 MS.gene020891:intron 50.0%
CGATATCACCTGCAGAGGTT+GGG + chr5.4:76593653-76593672 MS.gene020891:CDS 50.0%
CGCTACTACAGAGAATCCCT+TGG + chr5.4:76594087-76594106 MS.gene020891:CDS 50.0%
CTAGTAACAGTCGAGGACAC+TGG + chr5.4:76593314-76593333 MS.gene020891:CDS 50.0%
CTGCGGAAGGATGTTTACCA+TGG - chr5.4:76590602-76590621 None:intergenic 50.0%
CTTCCCTGACATCATGTCGA+TGG - chr5.4:76591080-76591099 None:intergenic 50.0%
GACCTCATGGGAGGAGAAAT+TGG + chr5.4:76593458-76593477 MS.gene020891:CDS 50.0%
GATATCGTGTAACCTCAGCC+CGG - chr5.4:76593640-76593659 None:intergenic 50.0%
GCAGTAGTTACCTGTGTGGA+GGG + chr5.4:76594243-76594262 MS.gene020891:CDS 50.0%
GGCAGGCAAACTAGAACTTG+AGG + chr5.4:76592688-76592707 MS.gene020891:CDS 50.0%
GGCTCTCTCATCACACATAG+TGG - chr5.4:76590505-76590524 None:intergenic 50.0%
TACCACTCGTGTGAGCAGTT+TGG - chr5.4:76592619-76592638 None:intergenic 50.0%
TGGAGCAGTAGTTACCTGTG+TGG + chr5.4:76594239-76594258 MS.gene020891:CDS 50.0%
TGTCTAGTTGACCTCATGGG+AGG + chr5.4:76593449-76593468 MS.gene020891:CDS 50.0%
! GAATAGCGAGAGCATGGACA+TGG - chr5.4:76590563-76590582 None:intergenic 50.0%
! GTGGCACGTGTCTTCAGTTT+TGG + chr5.4:76594666-76594685 MS.gene020891:CDS 50.0%
!! ACCCGTCCATTTCTGGCATT+TGG - chr5.4:76594332-76594351 None:intergenic 50.0%
!! GACAGCAATGGTTTGCTGAC+AGG - chr5.4:76591781-76591800 None:intergenic 50.0%
!! GCCAACAAGTGTTGACCAGA+TGG - chr5.4:76592510-76592529 None:intergenic 50.0%
!! TGAATCCGCTTTTGTGGAGC+AGG - chr5.4:76590336-76590355 None:intergenic 50.0%
!!! ATTTTGCGAGCAAGGGCATC+TGG + chr5.4:76591283-76591302 MS.gene020891:CDS 50.0%
ACATCCTTCCGCAGTTGACC+AGG + chr5.4:76590608-76590627 MS.gene020891:CDS 55.0%
AGCATTCTGGGCATCCTTGG+GGG + chr5.4:76592041-76592060 MS.gene020891:CDS 55.0%
CAGCATTCTGGGCATCCTTG+GGG + chr5.4:76592040-76592059 MS.gene020891:CDS 55.0%
CCCGGTCATTCAAAGGCTAC+TGG + chr5.4:76590366-76590385 MS.gene020891:CDS 55.0%
CCTTAGCCCCAATGAGCAGA+AGG + chr5.4:76593999-76594018 MS.gene020891:CDS 55.0%
CCTTCTGCTCATTGGGGCTA+AGG - chr5.4:76594002-76594021 None:intergenic 55.0%
CTGCTCATTGGGGCTAAGGT+GGG - chr5.4:76593998-76594017 None:intergenic 55.0%
GACAGCATTCTGGGCATCCT+TGG + chr5.4:76592038-76592057 MS.gene020891:CDS 55.0%
GATGCCCAGAATGCTGTCCA+AGG - chr5.4:76592036-76592055 None:intergenic 55.0%
GGATCGCCGATGACAACTTC+AGG - chr5.4:76592929-76592948 None:intergenic 55.0%
GGGTGGTAAGGCTGCTCTTA+AGG + chr5.4:76594263-76594282 MS.gene020891:CDS 55.0%
GTAGTTACCTGTGTGGAGGG+TGG + chr5.4:76594246-76594265 MS.gene020891:CDS 55.0%
GTTACCTGGTCAACTGCGGA+AGG - chr5.4:76590615-76590634 None:intergenic 55.0%
TACCTGTGTGGAGGGTGGTA+AGG + chr5.4:76594251-76594270 MS.gene020891:CDS 55.0%
TCCACATCGCGAACATACGG+TGG + chr5.4:76593398-76593417 MS.gene020891:CDS 55.0%
TCCACCGTATGTTCGCGATG+TGG - chr5.4:76593402-76593421 None:intergenic 55.0%
TCGCGAACATACGGTGGAAC+TGG + chr5.4:76593404-76593423 MS.gene020891:CDS 55.0%
TCTGCTCATTGGGGCTAAGG+TGG - chr5.4:76593999-76594018 None:intergenic 55.0%
TGTTCAGGCGTAGCATCTGG+AGG - chr5.4:76591397-76591416 None:intergenic 55.0%
! TGGAGGCGTATGCTTGAACC+TGG - chr5.4:76592010-76592029 None:intergenic 55.0%
!! AGCAAGGGCATCTGGAAAGG+GGG + chr5.4:76591291-76591310 MS.gene020891:CDS 55.0%
!! ATCCGCTTTTGTGGAGCAGG+TGG - chr5.4:76590333-76590352 None:intergenic 55.0%
!! ATGCGGCTTTGAGCATCGGT+AGG - chr5.4:76593350-76593369 None:intergenic 55.0%
!! CGAGCAAGGGCATCTGGAAA+GGG + chr5.4:76591289-76591308 MS.gene020891:CDS 55.0%
!! GAGCAAGGGCATCTGGAAAG+GGG + chr5.4:76591290-76591309 MS.gene020891:CDS 55.0%
!! GGCGCTGGATCCAAGTTTTC+TGG - chr5.4:76590998-76591017 None:intergenic 55.0%
!! TGGTTTGCTGACAGGCAAGC+TGG - chr5.4:76591773-76591792 None:intergenic 55.0%
AGCCTTACCACCCTCCACAC+AGG - chr5.4:76594256-76594275 None:intergenic 60.0%
CAGACATGCCCAACCTCTGC+AGG - chr5.4:76593664-76593683 None:intergenic 60.0%
CGCTGTTCAGGCGTAGCATC+TGG - chr5.4:76591400-76591419 None:intergenic 60.0%
CTCATTGGGGCTAAGGTGGG+TGG - chr5.4:76593995-76594014 None:intergenic 60.0%
GCCCAAACTGCTCACACGAG+TGG + chr5.4:76592614-76592633 MS.gene020891:CDS 60.0%
! GATGGGGGTGTGTGCGATTG+TGG + chr5.4:76590179-76590198 MS.gene020891:CDS 60.0%
!! GCGAGCAAGGGCATCTGGAA+AGG + chr5.4:76591288-76591307 MS.gene020891:CDS 60.0%
TGGGGCTAAGGTGGGTGGCC+AGG - chr5.4:76593990-76594009 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 76589291 76594695 76589291 ID=MS.gene020891
chr5.4 mRNA 76589291 76594695 76589291 ID=MS.gene020891.t1;Parent=MS.gene020891
chr5.4 exon 76589291 76589554 76589291 ID=MS.gene020891.t1.exon1;Parent=MS.gene020891.t1
chr5.4 CDS 76589291 76589554 76589291 ID=cds.MS.gene020891.t1;Parent=MS.gene020891.t1
chr5.4 exon 76590177 76590629 76590177 ID=MS.gene020891.t1.exon2;Parent=MS.gene020891.t1
chr5.4 CDS 76590177 76590629 76590177 ID=cds.MS.gene020891.t1;Parent=MS.gene020891.t1
chr5.4 exon 76590824 76591099 76590824 ID=MS.gene020891.t1.exon3;Parent=MS.gene020891.t1
chr5.4 CDS 76590824 76591099 76590824 ID=cds.MS.gene020891.t1;Parent=MS.gene020891.t1
chr5.4 exon 76591268 76591437 76591268 ID=MS.gene020891.t1.exon4;Parent=MS.gene020891.t1
chr5.4 CDS 76591268 76591437 76591268 ID=cds.MS.gene020891.t1;Parent=MS.gene020891.t1
chr5.4 exon 76591719 76591931 76591719 ID=MS.gene020891.t1.exon5;Parent=MS.gene020891.t1
chr5.4 CDS 76591719 76591931 76591719 ID=cds.MS.gene020891.t1;Parent=MS.gene020891.t1
chr5.4 exon 76592011 76592197 76592011 ID=MS.gene020891.t1.exon6;Parent=MS.gene020891.t1
chr5.4 CDS 76592011 76592197 76592011 ID=cds.MS.gene020891.t1;Parent=MS.gene020891.t1
chr5.4 exon 76592416 76592467 76592416 ID=MS.gene020891.t1.exon7;Parent=MS.gene020891.t1
chr5.4 CDS 76592416 76592467 76592416 ID=cds.MS.gene020891.t1;Parent=MS.gene020891.t1
chr5.4 exon 76592561 76592790 76592561 ID=MS.gene020891.t1.exon8;Parent=MS.gene020891.t1
chr5.4 CDS 76592561 76592790 76592561 ID=cds.MS.gene020891.t1;Parent=MS.gene020891.t1
chr5.4 exon 76592899 76592997 76592899 ID=MS.gene020891.t1.exon9;Parent=MS.gene020891.t1
chr5.4 CDS 76592899 76592997 76592899 ID=cds.MS.gene020891.t1;Parent=MS.gene020891.t1
chr5.4 exon 76593086 76593744 76593086 ID=MS.gene020891.t1.exon10;Parent=MS.gene020891.t1
chr5.4 CDS 76593086 76593744 76593086 ID=cds.MS.gene020891.t1;Parent=MS.gene020891.t1
chr5.4 exon 76593852 76594349 76593852 ID=MS.gene020891.t1.exon11;Parent=MS.gene020891.t1
chr5.4 CDS 76593852 76594349 76593852 ID=cds.MS.gene020891.t1;Parent=MS.gene020891.t1
chr5.4 exon 76594443 76594695 76594443 ID=MS.gene020891.t1.exon12;Parent=MS.gene020891.t1
chr5.4 CDS 76594443 76594695 76594443 ID=cds.MS.gene020891.t1;Parent=MS.gene020891.t1
Gene Sequence

>MS.gene020891

ATGCAGATTTTGTCCAATTGTATTGATGAAAGGAGGCTTCAAATGTTGTTAAGTAGTGGTACAGTGAACACTCCACAGTTAATGTGTCCGAAGAATTTGGAGTTACAAAAGGAGCATAGATATGTTGCAGAATCTGTAGAACAATGCCCAATTCTTGATGACTTTGTTCACATGAAGCTTGGATTATCATTCCCTTGGAAAGCATATGTAACATTGGACTCTGCACTTTTGTCCGATTTGGTTAACGTTTTGCTCCGTGGAAAGGTAGAGTTTTTACTATGTATCTGTTATGCCTAAAAGTTCTGTAGTTTAAATTGTTGATTCTGCTTGGAATTTGTTGGTACCTATGAATCATCCTAATTTACATAGTGATTGACCTTTAGACATCTTATATGCCTCATTTCTTTTAAGAATGTTGAGTGCATGTTTGCTTCCACATTGGTGTGGAGTTGAATGTGCGGTTGATAAACTCTACAAGACATAGCTTTTATCCTGTTTTACAGTATACCAACCACACTTTGAGTTTGTCGAAGCTCGGTGAGAAACAAAACCAGTAGTAATGCATCGTATGGATTTTCGATGATACCATTTTTATGCCCTTGCTAGAAGTTTGAAGATTCCTTTGAATTTGTAAACCAGAATCATAACATTCTTTTCAGCTTTGCTAGTGCTATAATTAATTCATATTTTGATGTTTAAAACACAGTGTAGTGCCAATCGTACTTTATTCTAGAATTTCATTTTACCTATAGTCTAATAACTTGATTATGTAAAGTAGTGGATTTTTGTTAGAGTTGCTGCAAACATTGTGCAGCAAGTGTGAAGATACATGCTTATTTGAAACATATAATTAATTCACTTTTTTATTTTGGTTTTGCAATCACAGGTGATGGGGGTGTGTGCGATTGTGGATAATGTGAATTTATCTAGTTTAATTAAAGGATGTTGTTTGGTCCTTATTGGCATTATACTGTCCCACAAGTTGTCTGGCTTTTGTTTACTAAGGAAGATTCAAAAGCAGAAGGTAGTTAAGGAGCATCCACCTGCTCCACAAAAGCGGATTCAACATTGTATGCCCGGTCATTCAAAGGCTACTGGTTGGCGGAGAAAAAAGTTGCTAGTTATTTTTATGTCAGTTGGAATCCTTGGTTCTGCATGGTTATTTAGGTACATGAGTTCAGACATTGCGCAAAGAAGAGAAGAAATGCTTGCCACTATGTGTGATGAGAGAGCCCGTATGTTGCAAGATCAATTTAACGTGAGCATGAACCATGTCCATGCTCTCGCTATTCTTGTGTCTACATTTCACCATGGTAAACATCCTTCCGCAGTTGACCAGGTAACATACTCAATGTCATTATTTTCTCTTATTGGGGTATTGCCTCGGGTCTGCTAGTTCATATTTCATATTTAGAGTTATTCATGGCTTATTTATTGTTATTGTTTTAATTTTAATATTACACATTTTAAGGAAAACAATTGAAGTGATAAAGTATAAGGAAAAATAACATTGAAGCTTTTGTTTGACTGCAGAAAATATTTGGAGAATATACAGAGAGTTCGGCATTTGAGAGACCACTTACTAGTGGTGTTGCTTATGCTTTGAAAGTTCTCCATTCTGATAGGATGCATTTTGAGAAGCAGCATGGTTGGACAATTAAGAAAATGGAAACTGAGAACGAGGCATTAGTTCAAGAATGTATTCCAGAAAACTTGGATCCAGCGCCCATTCAAGATGAATATGCACCAGTCGTATTTGCTCAAGAAACGGTTTCTCATATTGTATCCATCGACATGATGTCAGGGAAGGTGTGCCTCTCTTAGCTTGCTATCACACCTTATGTTATTGACAGTCGTCACAGTCATAGTGATAGATTCAGATGAAATAAGCTTGGATCTTTTGTCTATAGATTTTTGCATTAAATTGCTCACATATCAGGTTGTAACAAAATTTTATTTTTTTGCATTGTTATATAGGAGGATCGTGAGAATATTTTGCGAGCAAGGGCATCTGGAAAGGGGGTTCTGACATCCCCTTTTAAACTACTAAAGTCCAATTACCTCGGTGTTGTACTTACATTTGCTGTCTATGACTCTAAGCTTCCTCCAGATGCTACGCCTGAACAGCGTATTGAAGCTACTGTGGGGTAATTTTATCCAATGATAACTTAATGAGATTAATACACATACACTATCAATGTAAATAAGTTTTACACATTCATCCTATGATGTGTTGCCACATCACTTAATTAGTTACATTCATCCTACCGTGGAGTATTTTTACAATGTCGGTGTATTGGATGTAATGTGTGTGTTGGTATCCGTGTATCACATGCATTTGTAAAACCTCTTTACAGTGACAGTGTATATATTTTAACTCAATTACAAACTGAATGTAATGTGTGTGTTGTTATCCATGTATTGGAAGGTATCTGGGTGCATCCTATGATGTTCCATCACTTGTGGACAAGCTTCTTCACCAGCTTGCCTGTCAGCAAACCATTGCTGTCAATGTGTATGACACAACTAATGCATCTGATCCTATTACGATGTATGGTACCGATGTTCTTGATACTGGCTTACTACACGTAAGCGGTCTAGATTTTGGGGATCCACTACGAAAACATGAGATGCACTGCAGGTTTGTTTTCACTATAAAGTTCTATTTTATACCCAAATAATTGAAATATCACATAAGTATATTTCCATTTTTTTGCCAGGTTCAAGCATACGCCTCCATTTCCTTGGACAGCATTCTGGGCATCCTTGGGGGTATTTGTTATTACCTTTCTTCTTGGATATATATTTTATGCAGCAATAAATCGAATAGCTAAAGTGGAAGATGACTATTGTCAAATGAGAGAGCTGAAAGTTCGTGCTGAAGCTGCAGATGTCGCAAAATCTCAGGTTAGATATATTTTGGGGATCGTTGCTTTCTGTAATGCAACAAAATTGTTTCCGATGGCAAGAATGTTAGGATTTCTGTTGCAAATTCATATGTTCAATACATCATATGTTGATCATGTTAAACATGAGAATTATTACTCACAACTTATATAACCTTTTATGTAATTGAAATTACTAATTCTCTCTTGACCTCAAAGGATTGGTTTCTCTTTTTGTAGTTTCTTGCGACAGTTTCACATGAGATCAGGACTCCAATGAATGGTGTTTTAGGTAATTGAGAATAATTTGTTGTTGTTATAATAGATAATCCCATCTGGTCAACACTTGTTGGCTAATCTCAACTGTTTTCAAATAATTTTCCAGGTATGCTGCAAATGTTGATGGATACTGACCTTGATGACAATCAGATGGATTTTGCCCAAACTGCTCACACGAGTGGTAAAGATCTTATATCAGTTATAAGCGAGGTTCTCTATCAAGCTAAGATCGAGGCAGGCAAACTAGAACTTGAGGCTGTAGCTTTTCATCCACATGCAATTCTAGATGAAGTTCTATCACTTTTCTCTGAAAAGTCCGATGAAAAAGGAATTGAGGTGAAGCCCTATCTTTAGATACTTTACTTTGTTTTGTACCCTCCAATTATCTCGGCATTCAGTCTTTACATAAACTTATGTTCTCTATACCTTTTTGGTTGAGTACAGTTGGCTGTTTATGCATCTAACCAAGTACCTGAAGTTGTCATCGGCGATCCTAAACGCTTCCGACAAATAATTACCAATCTTGTTGGAAATTCACTTAAGGTTTGCAACATTTTACACTGAACTATCATCTCTTTTAGCTGCTGCGGATTTATAATCTCTGTTAATTAGTTTACTTGCTGCATTTCAGTTCATTCACAATAAAGGACATGTTTTTGTCTCGATTCATCTGGCAAATGAAGTGAAGAGTCCACTTCACATCATGGATGCAGTGCTGAGAGAATGCTTAAACTTGAATCAGGACATGTCGGAAAGAACATGCAATACATTGAGTGGATTTCCTGTAGGAAACAGATGGAAAAGCTGGGAAAAGTTTCAAAAGTTAAATTTGGCGCATGAGTCAGAAACTATCCAACTACTAGTAACAGTCGAGGACACTGGTATAGGAATTCCTACCGATGCTCAAAGCCGCATATTTACACCTTTCATGCAGGCTGATAGTTCCACATCGCGAACATACGGTGGAACTGGAATAGGATTAAGCATTAGTAAATGTCTAGTTGACCTCATGGGAGGAGAAATTGGATTTGTAAGTGAGCCTGAAATTGGAAGTACTTTTTCATTTACTGGAAATTTTAGAAAAGGAGAAACAGAATCTGTGGATGAGAAGTGGCAGAAGAATAATCCTTTGGCCTCTGAGTTCCAGGGTTTGAGAGCATTAGTAATAGATAGAAGAAAAATCCGGGCTGAGGTTACACGATATCACCTGCAGAGGTTGGGCATGTCTGTAGATGTAAATTCCAGTCTTCAATCTGCTTGCTTTTCTATTTCTGATACTTGCAACTCAAGGTAATGTGTTAGTTTTTTTGGTCTAAGATGAAAATTCAGATCAGTTGTACCGGACATTAGGTTATTATAATATTTACTAATTATTGCTTTTGTTTCCATTCTTTCAGTATGTCGACGCAGTTGGCCATGATTCTTATAGACAAGGATTCTTGGGACAAGGAAAGTAGCATCTTATACGCAATCAAGAAACAAGGACAGAATGGCGTCAAAGGTGACTCGCTAAACTTTCCAAAGATTTTTCTCCTGGCCACCCACCTTAGCCCCAATGAGCAGAAGGAGCTAAAGTCAGTTGGTATCATAGATGATGTACTAATGAAGCCTCTTTGGCAAAGTGTTTTGATTCGCTACTACAGAGAATCCCTTGGAACTGGGAGAAAACAAATAGACAGAAAAAAAGTATCCCAACTTGAAAATTTATTGATACACAAACGAATTTTGGTGGTCGATGATAACGCAGTGAACAGAAAAGTTGCAGAAGGTGTTCTGCGAAAATATGGAGCAGTAGTTACCTGTGTGGAGGGTGGTAAGGCTGCTCTTAAGGTGCTTAAGCCACCACATAATTTTGATGCTTGTTTCATGGATCTCCAAATGCCAGAAATGGACGGGTAATTAATCTGCATATTCTTCATCTGTTTAGTTTGTTTTTGACTTTTGTATGCAAGTATAATTCACAAGTATTTTCTTCTTACATGTTGCAGTTTTGAGGTGACTAGGCTAATCCGGTATATGGAGAACGAGGTAAATGAAAAAATTGCATGTGGGAAAGAATTGGCAGAGATGTTTGGTAACATTTCTTATTGGCACATACCAATACTAGCTATGACAGCTGATGTAACTCAAGCATCAAATGAAGAATGCAAAAAATGTGGGATGGATGACTTTGTGTCAAAGCCATTTGAAGAAGAGCAACTCTATACGGCAGTGGCACGTGTCTTCAGTTTTGGTTCATAG
Protein sequence

>MS.gene020891.t1

MQILSNCIDERRLQMLLSSGTVNTPQLMCPKNLELQKEHRYVAESVEQCPILDDFVHMKLGLSFPWKAYVTLDSALLSDLVNVLLRGKVMGVCAIVDNVNLSSLIKGCCLVLIGIILSHKLSGFCLLRKIQKQKVVKEHPPAPQKRIQHCMPGHSKATGWRRKKLLVIFMSVGILGSAWLFRYMSSDIAQRREEMLATMCDERARMLQDQFNVSMNHVHALAILVSTFHHGKHPSAVDQKIFGEYTESSAFERPLTSGVAYALKVLHSDRMHFEKQHGWTIKKMETENEALVQECIPENLDPAPIQDEYAPVVFAQETVSHIVSIDMMSGKEDRENILRARASGKGVLTSPFKLLKSNYLGVVLTFAVYDSKLPPDATPEQRIEATVGYLGASYDVPSLVDKLLHQLACQQTIAVNVYDTTNASDPITMYGTDVLDTGLLHVSGLDFGDPLRKHEMHCRFKHTPPFPWTAFWASLGVFVITFLLGYIFYAAINRIAKVEDDYCQMRELKVRAEAADVAKSQFLATVSHEIRTPMNGVLGMLQMLMDTDLDDNQMDFAQTAHTSGKDLISVISEVLYQAKIEAGKLELEAVAFHPHAILDEVLSLFSEKSDEKGIELAVYASNQVPEVVIGDPKRFRQIITNLVGNSLKFIHNKGHVFVSIHLANEVKSPLHIMDAVLRECLNLNQDMSERTCNTLSGFPVGNRWKSWEKFQKLNLAHESETIQLLVTVEDTGIGIPTDAQSRIFTPFMQADSSTSRTYGGTGIGLSISKCLVDLMGGEIGFVSEPEIGSTFSFTGNFRKGETESVDEKWQKNNPLASEFQGLRALVIDRRKIRAEVTRYHLQRLGMSVDVNSSLQSACFSISDTCNSSMSTQLAMILIDKDSWDKESSILYAIKKQGQNGVKGDSLNFPKIFLLATHLSPNEQKELKSVGIIDDVLMKPLWQSVLIRYYRESLGTGRKQIDRKKVSQLENLLIHKRILVVDDNAVNRKVAEGVLRKYGAVVTCVEGGKAALKVLKPPHNFDACFMDLQMPEMDGFEVTRLIRYMENEVNEKIACGKELAEMFGNISYWHIPILAMTADVTQASNEECKKCGMDDFVSKPFEEEQLYTAVARVFSFGS