AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene020899

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene020899.t1 MTR_5g097490 93.350 391 21 1 1 386 1 391 0.0 735
MS.gene020899.t1 MTR_5g097500 54.259 317 128 4 1 317 1 300 3.21e-109 323
MS.gene020899.t1 MTR_3g056100 43.777 233 121 3 84 309 91 320 1.50e-55 189
MS.gene020899.t1 MTR_7g071120 45.652 230 121 4 85 310 158 387 6.38e-55 188
MS.gene020899.t1 MTR_3g056100 42.915 247 116 5 84 309 91 333 6.57e-55 187
MS.gene020899.t1 MTR_3g056100 43.777 233 121 3 84 309 235 464 1.43e-54 189
MS.gene020899.t1 MTR_3g056100 42.915 247 116 5 84 309 235 477 4.99e-54 188
MS.gene020899.t1 MTR_3g031220 41.288 264 128 5 80 323 185 441 1.65e-53 185
MS.gene020899.t1 MTR_5g094430 42.105 247 128 4 91 325 65 308 1.24e-52 180
MS.gene020899.t1 MTR_5g094430 42.105 247 128 4 91 325 87 330 1.98e-52 180
MS.gene020899.t1 MTR_5g094430 42.105 247 128 4 91 325 199 442 1.06e-51 181
MS.gene020899.t1 MTR_5g074400 44.167 240 112 5 93 310 244 483 5.27e-51 180
MS.gene020899.t1 MTR_7g080000 38.194 288 125 7 89 328 231 513 1.25e-49 178
MS.gene020899.t1 MTR_7g080020 37.179 312 134 7 89 338 277 588 2.94e-49 177
MS.gene020899.t1 MTR_4g013260 40.927 259 131 6 86 329 176 427 5.37e-49 172
MS.gene020899.t1 MTR_5g042920 38.889 288 137 7 52 309 104 382 9.27e-49 171
MS.gene020899.t1 MTR_5g042920 48.485 66 33 1 90 154 318 383 1.74e-11 65.9
MS.gene020899.t1 MTR_7g100510 38.956 249 128 5 75 306 179 420 3.36e-45 161
MS.gene020899.t1 MTR_7g100510 35.714 126 69 3 248 370 190 306 1.79e-15 77.8
MS.gene020899.t1 MTR_7g100510 40.659 91 48 2 70 154 334 424 5.99e-12 67.0
MS.gene020899.t1 MTR_4g082580 39.910 223 110 4 88 309 141 340 2.24e-44 158
MS.gene020899.t1 MTR_7g011820 36.678 289 127 7 84 327 220 497 5.72e-44 159
MS.gene020899.t1 MTR_4g130900 34.646 254 116 6 93 312 187 424 2.93e-35 135
MS.gene020899.t1 MTR_3g031220 39.234 209 98 7 80 267 185 385 3.54e-31 122
MS.gene020899.t1 MTR_3g031220 41.489 94 52 2 215 308 168 258 4.27e-15 76.6
MS.gene020899.t1 MTR_3g009470 57.000 100 42 1 210 309 459 557 5.18e-29 119
MS.gene020899.t1 MTR_3g009470 50.000 88 37 1 91 171 279 366 6.34e-20 92.0
MS.gene020899.t1 MTR_3g009470 46.465 99 40 4 215 306 246 338 3.05e-14 74.7
MS.gene020899.t1 MTR_3g009470 50.000 64 31 1 90 152 493 556 8.36e-12 67.4
MS.gene020899.t1 MTR_4g021780 52.000 100 47 1 81 180 12 110 4.42e-27 104
MS.gene020899.t1 MTR_1g015140 62.857 70 26 0 234 303 89 158 3.63e-25 100
MS.gene020899.t1 MTR_3g104750 60.000 70 28 0 234 303 91 160 2.33e-23 95.9
MS.gene020899.t1 MTR_4g132430 43.636 110 58 3 203 308 81 190 3.59e-23 99.8
MS.gene020899.t1 MTR_3g053330 41.379 116 65 3 202 315 207 321 4.01e-23 100
MS.gene020899.t1 MTR_3g053330 47.619 63 31 2 90 150 249 311 7.40e-11 63.9
MS.gene020899.t1 MTR_7g110720 48.837 86 42 2 232 315 174 259 9.15e-23 99.4
MS.gene020899.t1 MTR_7g110720 38.532 109 56 5 55 155 149 254 3.50e-12 67.8
MS.gene020899.t1 MTR_7g110720 48.837 86 42 2 232 315 201 286 1.48e-22 99.0
MS.gene020899.t1 MTR_7g110720 38.532 109 56 5 55 155 176 281 3.91e-12 67.8
MS.gene020899.t1 MTR_2g088000 52.439 82 38 1 226 306 328 409 1.54e-22 99.8
MS.gene020899.t1 MTR_4g132430 49.474 95 41 3 221 308 230 324 2.22e-22 99.0
MS.gene020899.t1 MTR_4g094412 52.500 80 37 1 230 308 217 296 9.14e-22 97.1
MS.gene020899.t1 MTR_4g094412 52.500 80 37 1 230 308 226 305 9.64e-22 97.1
MS.gene020899.t1 MTR_7g109800 57.333 75 32 0 232 306 130 204 9.71e-22 94.7
MS.gene020899.t1 MTR_7g109800 50.000 60 29 1 92 150 145 204 7.21e-11 63.2
MS.gene020899.t1 MTR_4g094588 55.056 89 36 2 234 321 165 250 1.04e-21 95.5
MS.gene020899.t1 MTR_4g094588 51.515 66 23 2 92 152 178 239 3.44e-12 67.4
MS.gene020899.t1 MTR_2g023930 43.000 100 55 2 209 306 267 366 1.06e-21 97.1
MS.gene020899.t1 MTR_8g092010 48.387 93 46 1 216 306 75 167 1.29e-21 91.7
MS.gene020899.t1 MTR_5g091390 57.692 78 32 1 234 310 144 221 2.68e-21 93.6
MS.gene020899.t1 MTR_8g007270 52.703 74 35 0 232 305 139 212 6.25e-21 90.9
MS.gene020899.t1 MTR_8g007270 49.254 67 32 2 90 154 152 218 3.27e-11 63.2
MS.gene020899.t1 MTR_4g049790 48.315 89 40 2 226 308 286 374 6.68e-21 94.7
MS.gene020899.t1 MTR_2g033820 55.263 76 34 0 232 307 188 263 1.09e-20 92.8
MS.gene020899.t1 MTR_2g033820 52.542 59 27 1 93 150 204 262 7.23e-12 66.6
MS.gene020899.t1 MTR_5g043880 53.409 88 37 1 234 317 111 198 1.52e-20 90.9
MS.gene020899.t1 MTR_5g043880 54.386 57 25 1 92 147 124 180 2.00e-11 64.3
MS.gene020899.t1 MTR_1g077780 48.684 76 39 0 232 307 47 122 1.76e-20 87.4
MS.gene020899.t1 MTR_3g095080 51.351 74 36 0 232 305 129 202 1.88e-20 89.4
MS.gene020899.t1 MTR_3g095080 51.351 74 36 0 232 305 153 226 2.15e-20 89.7
MS.gene020899.t1 MTR_1g013790 43.564 101 43 4 234 320 86 186 4.11e-20 89.4
MS.gene020899.t1 MTR_8g096730 39.175 97 57 1 207 303 32 126 4.40e-20 86.3
MS.gene020899.t1 MTR_8g096730 45.946 74 37 2 90 162 68 139 2.40e-13 67.4
MS.gene020899.t1 MTR_1g086790 55.263 76 34 0 232 307 143 218 6.09e-20 90.1
MS.gene020899.t1 MTR_1g086790 40.659 91 49 2 92 177 158 248 2.03e-12 67.8
MS.gene020899.t1 MTR_3g009470 50.000 88 37 1 91 171 279 366 6.20e-20 91.7
MS.gene020899.t1 MTR_3g009470 46.465 99 40 4 215 306 246 338 3.20e-14 74.3
MS.gene020899.t1 MTR_3g009470 60.345 58 22 1 210 267 459 515 2.05e-11 65.9
MS.gene020899.t1 MTR_7g028415 55.224 67 30 0 237 303 83 149 7.84e-20 86.3
MS.gene020899.t1 MTR_7g028415 48.333 60 30 1 90 148 91 150 2.99e-12 65.1
MS.gene020899.t1 MTR_7g028710 55.224 67 30 0 237 303 83 149 7.84e-20 86.3
MS.gene020899.t1 MTR_7g028710 48.333 60 30 1 90 148 91 150 2.99e-12 65.1
MS.gene020899.t1 MTR_3g106060 52.703 74 32 3 233 303 122 195 7.93e-20 89.4
MS.gene020899.t1 MTR_7g079010 54.286 70 32 0 234 303 128 197 1.51e-19 86.7
MS.gene020899.t1 MTR_7g079010 51.667 60 28 1 90 148 139 198 2.53e-13 68.9
MS.gene020899.t1 MTR_4g049760 42.000 100 56 2 218 315 261 360 1.65e-19 90.5
MS.gene020899.t1 MTR_4g107970 50.000 76 37 1 232 306 163 238 2.92e-19 89.7
MS.gene020899.t1 MTR_4g122530 49.333 75 38 0 233 307 194 268 2.96e-19 89.4
MS.gene020899.t1 MTR_4g107970 50.000 76 37 1 232 306 240 315 3.26e-19 89.7
MS.gene020899.t1 MTR_1g013760 53.425 73 31 2 234 303 125 197 3.32e-19 87.4
MS.gene020899.t1 MTR_3g095040 52.055 73 35 0 234 306 105 177 3.63e-19 85.5
MS.gene020899.t1 MTR_3g095040 42.667 75 42 1 89 162 115 189 2.48e-11 63.2
MS.gene020899.t1 MTR_2g045360 40.708 113 61 3 218 328 182 290 6.24e-19 88.2
MS.gene020899.t1 MTR_6g086555 37.008 127 79 1 182 307 141 267 7.35e-19 87.8
MS.gene020899.t1 MTR_7g009730 52.113 71 33 1 234 303 206 276 1.11e-18 88.2
MS.gene020899.t1 MTR_7g062220 57.377 61 26 0 244 304 121 181 1.47e-18 85.9
MS.gene020899.t1 MTR_8g092140 50.667 75 36 1 232 305 144 218 1.63e-18 84.3
MS.gene020899.t1 MTR_4g007060 46.875 96 39 5 233 316 112 207 3.16e-18 84.3
MS.gene020899.t1 MTR_4g007060 44.444 63 33 2 90 150 126 188 3.58e-11 63.9
MS.gene020899.t1 MTR_4g007060 46.875 96 39 5 233 316 146 241 4.84e-18 84.3
MS.gene020899.t1 MTR_4g007060 44.444 63 33 2 90 150 160 222 4.92e-11 63.5
MS.gene020899.t1 MTR_1g078260 40.000 95 56 1 212 305 212 306 5.85e-18 85.9
MS.gene020899.t1 MTR_2g105060 50.000 78 36 2 233 307 78 155 2.03e-17 81.3
MS.gene020899.t1 MTR_2g105060 50.000 78 36 2 233 307 153 230 3.23e-17 82.0
MS.gene020899.t1 MTR_4g094908 54.386 57 25 1 248 303 267 323 3.14e-16 79.3
MS.gene020899.t1 MTR_1g009613 49.296 71 35 1 234 303 249 319 5.11e-16 79.0
MS.gene020899.t1 MTR_5g016610 47.887 71 36 1 234 303 186 256 8.16e-16 77.4
MS.gene020899.t1 MTR_7g109600 39.130 115 57 4 195 308 13 115 2.95e-15 75.5
MS.gene020899.t1 MTR_1g070455 55.172 58 25 1 248 304 294 351 3.62e-15 76.6
MS.gene020899.t1 MTR_4g127040 46.479 71 37 1 234 303 232 302 6.59e-15 75.5
MS.gene020899.t1 MTR_2g083870 42.857 91 45 2 226 315 65 149 1.44e-14 73.6
MS.gene020899.t1 MTR_8g087000 50.000 64 31 1 247 309 77 140 1.96e-14 72.8
MS.gene020899.t1 MTR_8g087000 50.000 64 31 1 247 309 76 139 2.01e-14 72.8
MS.gene020899.t1 MTR_8g098945 47.222 72 37 1 239 309 121 192 2.23e-14 73.2
MS.gene020899.t1 MTR_1g099600 43.038 79 43 2 232 309 171 248 5.83e-14 72.4
MS.gene020899.t1 MTR_2g024350 50.820 61 29 1 248 307 9 69 6.44e-14 70.9
MS.gene020899.t1 MTR_2g024350 51.471 68 31 2 88 153 4 71 1.30e-13 70.1
MS.gene020899.t1 MTR_4g047580 44.595 74 40 1 226 298 260 333 8.44e-14 73.2
MS.gene020899.t1 MTR_5g044695 53.448 58 22 1 221 273 46 103 1.03e-13 67.4
MS.gene020899.t1 MTR_5g074200 31.169 154 85 2 1 154 150 282 1.47e-13 71.2
MS.gene020899.t1 MTR_5g074200 39.785 93 48 4 217 307 193 279 2.57e-12 67.8
MS.gene020899.t1 MTR_8g028565 48.485 66 33 1 245 309 153 218 2.01e-13 71.2
MS.gene020899.t1 MTR_2g024380 50.820 61 29 1 248 307 252 312 2.14e-13 71.6
MS.gene020899.t1 MTR_2g024380 49.275 69 31 3 88 153 247 314 2.68e-12 68.6
MS.gene020899.t1 MTR_8g067650 46.377 69 33 3 88 153 335 402 3.01e-13 71.2
MS.gene020899.t1 MTR_8g067650 42.308 78 44 1 230 306 322 399 1.13e-11 66.6
MS.gene020899.t1 MTR_8g067635 48.529 68 31 3 89 153 346 412 3.35e-13 71.2
MS.gene020899.t1 MTR_8g067635 42.308 78 44 1 230 306 332 409 1.70e-11 65.9
MS.gene020899.t1 MTR_2g016770 50.820 61 28 2 248 306 36 96 3.88e-13 68.6
MS.gene020899.t1 MTR_2g016770 50.820 61 28 2 248 306 28 88 4.72e-13 68.2
MS.gene020899.t1 MTR_7g079040 33.094 139 70 4 245 360 152 290 5.51e-13 69.7
MS.gene020899.t1 MTR_4g007060 47.436 78 38 3 233 307 146 223 5.60e-13 68.6
MS.gene020899.t1 MTR_0117s0040 34.615 130 57 5 178 303 26 131 1.22e-12 67.8
MS.gene020899.t1 MTR_2g032030 49.206 63 31 1 248 309 268 330 1.86e-12 68.6
MS.gene020899.t1 MTR_2g032030 49.231 65 31 2 88 150 263 327 8.06e-11 63.5
MS.gene020899.t1 MTR_2g032030 49.206 63 31 1 248 309 268 330 2.14e-12 68.6
MS.gene020899.t1 MTR_6g038890 50.820 61 29 1 213 273 155 214 3.21e-12 65.9
MS.gene020899.t1 MTR_3g108960 43.836 73 40 1 232 303 299 371 5.30e-12 67.4
MS.gene020899.t1 MTR_8g069935 44.928 69 34 2 248 315 332 397 1.40e-11 66.2
MS.gene020899.t1 MTR_3g090860 45.902 61 30 1 244 301 130 190 5.85e-11 63.5
MS.gene020899.t1 MTR_8g027860 44.615 65 33 1 240 301 129 193 5.93e-11 63.5
MS.gene020899.t1 MTR_6g053200 44.444 63 34 1 248 309 331 393 6.54e-11 64.3
MS.gene020899.t1 MTR_5g067680 47.368 57 27 1 248 301 203 259 7.22e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene020899.t1 AT2G04880 45.113 266 110 7 76 314 94 350 6.15e-66 216
MS.gene020899.t1 AT2G04880 44.128 281 115 7 76 314 94 374 8.32e-65 214
MS.gene020899.t1 AT4G26640 41.017 295 128 8 83 344 30 311 1.70e-53 182
MS.gene020899.t1 AT4G26640 50.725 69 33 1 238 306 26 93 4.68e-14 73.6
MS.gene020899.t1 AT4G26640 41.017 295 128 8 83 344 30 311 1.70e-53 182
MS.gene020899.t1 AT4G26640 50.725 69 33 1 238 306 26 93 4.68e-14 73.6
MS.gene020899.t1 AT4G26640 41.017 295 128 8 83 344 30 311 1.70e-53 182
MS.gene020899.t1 AT4G26640 50.725 69 33 1 238 306 26 93 4.68e-14 73.6
MS.gene020899.t1 AT4G26640 41.017 295 128 8 83 344 30 311 1.70e-53 182
MS.gene020899.t1 AT4G26640 50.725 69 33 1 238 306 26 93 4.68e-14 73.6
MS.gene020899.t1 AT4G26640 41.017 295 128 8 83 344 134 415 1.12e-52 182
MS.gene020899.t1 AT4G26640 41.017 295 128 8 83 344 166 447 2.64e-52 182
MS.gene020899.t1 AT4G26640 41.017 295 128 8 83 344 206 487 3.48e-52 182
MS.gene020899.t1 AT2G30250 42.979 235 123 6 83 308 157 389 8.34e-50 172
MS.gene020899.t1 AT2G38470 43.621 243 112 5 92 310 184 425 1.36e-49 175
MS.gene020899.t1 AT2G38470 51.562 64 30 1 90 152 360 423 4.47e-12 67.8
MS.gene020899.t1 AT5G07100 41.441 222 90 3 89 309 21 203 1.16e-47 162
MS.gene020899.t1 AT5G07100 41.441 222 90 3 89 309 21 203 1.16e-47 162
MS.gene020899.t1 AT5G07100 41.441 222 90 3 89 309 21 203 1.16e-47 162
MS.gene020899.t1 AT5G07100 41.441 222 90 3 89 309 21 203 1.16e-47 162
MS.gene020899.t1 AT5G07100 41.441 222 90 3 89 309 114 296 3.16e-47 163
MS.gene020899.t1 AT1G13960 39.754 244 122 5 88 306 72 315 7.84e-47 164
MS.gene020899.t1 AT3G01080 40.639 219 114 3 88 306 163 365 4.36e-45 160
MS.gene020899.t1 AT3G01080 56.250 64 27 1 246 309 166 228 1.04e-14 75.5
MS.gene020899.t1 AT4G30935 36.513 304 167 10 33 312 95 396 5.08e-45 161
MS.gene020899.t1 AT3G01080 40.741 216 112 3 88 303 201 400 6.73e-45 161
MS.gene020899.t1 AT3G01080 56.250 64 27 1 246 309 204 266 1.33e-14 75.5
MS.gene020899.t1 AT3G01080 50.000 62 30 1 90 150 342 403 8.51e-11 63.9
MS.gene020899.t1 AT4G26440 34.783 322 156 6 35 309 120 434 8.34e-45 163
MS.gene020899.t1 AT2G37260 36.940 268 114 8 93 316 84 340 5.52e-40 145
MS.gene020899.t1 AT2G37260 36.940 268 114 8 93 316 86 342 5.71e-40 145
MS.gene020899.t1 AT2G37260 36.940 268 114 8 93 316 166 422 1.43e-39 146
MS.gene020899.t1 AT5G56270 55.000 100 45 0 210 309 450 549 8.17e-30 121
MS.gene020899.t1 AT5G56270 55.932 59 25 1 248 306 274 331 5.17e-15 77.0
MS.gene020899.t1 AT5G56270 53.968 63 29 0 91 153 272 334 8.56e-15 76.6
MS.gene020899.t1 AT5G56270 50.000 64 31 1 90 152 485 548 2.68e-11 65.9
MS.gene020899.t1 AT1G13960 61.111 72 28 0 232 303 394 465 1.94e-26 110
MS.gene020899.t1 AT2G03340 57.692 78 33 0 232 309 400 477 6.31e-26 109
MS.gene020899.t1 AT2G03340 56.250 64 28 0 88 151 246 309 2.75e-17 84.0
MS.gene020899.t1 AT2G03340 56.923 65 27 1 246 310 249 312 7.77e-17 82.4
MS.gene020899.t1 AT2G03340 48.485 66 33 1 90 154 413 478 5.74e-12 67.4
MS.gene020899.t1 AT4G12020 35.354 198 110 3 88 267 464 661 1.47e-23 103
MS.gene020899.t1 AT4G12020 34.483 116 70 3 246 356 467 581 1.16e-12 70.5
MS.gene020899.t1 AT4G12020 35.354 198 110 3 88 267 464 661 1.52e-23 103
MS.gene020899.t1 AT4G12020 34.483 116 70 3 246 356 467 581 1.22e-12 70.1
MS.gene020899.t1 AT4G12020 35.354 198 110 3 88 267 464 661 1.52e-23 103
MS.gene020899.t1 AT4G12020 34.483 116 70 3 246 356 467 581 1.22e-12 70.1
MS.gene020899.t1 AT4G12020 35.354 198 110 3 88 267 464 661 1.55e-23 103
MS.gene020899.t1 AT4G12020 34.483 116 70 3 246 356 467 581 1.32e-12 70.1
MS.gene020899.t1 AT4G12020 35.354 198 110 3 88 267 464 661 1.61e-23 103
MS.gene020899.t1 AT4G12020 50.820 61 29 1 246 306 467 526 1.38e-12 70.1
MS.gene020899.t1 AT4G12020 35.354 198 110 3 88 267 464 661 1.67e-23 103
MS.gene020899.t1 AT4G12020 34.483 116 70 3 246 356 467 581 1.25e-12 70.1
MS.gene020899.t1 AT4G12020 35.354 198 110 3 88 267 464 661 1.67e-23 103
MS.gene020899.t1 AT4G12020 34.483 116 70 3 246 356 467 581 1.25e-12 70.1
MS.gene020899.t1 AT4G12020 35.354 198 110 3 88 267 464 661 1.75e-23 103
MS.gene020899.t1 AT4G12020 34.483 116 70 3 246 356 467 581 1.13e-12 70.1
MS.gene020899.t1 AT4G12020 35.354 198 110 3 88 267 464 661 1.77e-23 103
MS.gene020899.t1 AT4G12020 34.483 116 70 3 246 356 467 581 1.37e-12 70.1
MS.gene020899.t1 AT4G12020 35.354 198 110 3 88 267 397 594 1.89e-23 103
MS.gene020899.t1 AT4G12020 34.483 116 70 3 246 356 400 514 1.43e-12 70.1
MS.gene020899.t1 AT4G12020 35.354 198 110 3 88 267 464 661 1.92e-23 103
MS.gene020899.t1 AT4G12020 34.483 116 70 3 246 356 467 581 1.46e-12 70.1
MS.gene020899.t1 AT5G26170 57.143 70 30 0 234 303 100 169 2.41e-23 96.3
MS.gene020899.t1 AT4G04450 42.735 117 63 4 225 337 176 292 6.81e-23 100
MS.gene020899.t1 AT4G04450 47.619 63 31 2 90 150 196 258 2.02e-11 65.5
MS.gene020899.t1 AT4G22070 49.425 87 42 2 222 306 272 358 9.75e-23 100
MS.gene020899.t1 AT4G22070 47.619 63 31 2 90 150 295 357 4.17e-11 65.1
MS.gene020899.t1 AT4G22070 49.425 87 42 2 222 306 272 358 9.75e-23 100
MS.gene020899.t1 AT4G22070 47.619 63 31 2 90 150 295 357 4.17e-11 65.1
MS.gene020899.t1 AT4G22070 49.425 87 42 2 222 306 272 358 9.75e-23 100
MS.gene020899.t1 AT4G22070 47.619 63 31 2 90 150 295 357 4.17e-11 65.1
MS.gene020899.t1 AT4G22070 49.425 87 42 2 222 306 272 358 9.75e-23 100
MS.gene020899.t1 AT4G22070 47.619 63 31 2 90 150 295 357 4.17e-11 65.1
MS.gene020899.t1 AT4G04450 42.735 117 63 4 225 337 270 386 1.43e-22 99.8
MS.gene020899.t1 AT4G04450 47.619 63 31 2 90 150 290 352 3.38e-11 65.1
MS.gene020899.t1 AT5G64810 57.143 70 30 0 234 303 97 166 1.55e-22 94.4
MS.gene020899.t1 AT2G47260 57.333 75 32 0 232 306 159 233 1.85e-22 97.4
MS.gene020899.t1 AT1G68150 52.500 80 37 1 230 308 218 297 2.97e-22 97.4
MS.gene020899.t1 AT1G62300 47.059 102 49 3 210 306 272 373 6.57e-22 97.8
MS.gene020899.t1 AT1G62300 47.619 63 31 2 90 150 310 372 4.81e-11 64.7
MS.gene020899.t1 AT1G55600 49.412 85 43 0 222 306 282 366 7.07e-22 97.4
MS.gene020899.t1 AT1G55600 43.421 76 34 2 76 150 299 366 7.44e-11 63.9
MS.gene020899.t1 AT1G29860 57.500 80 33 1 232 310 121 200 7.08e-22 94.7
MS.gene020899.t1 AT1G29860 50.000 60 29 1 92 150 136 195 9.11e-11 62.8
MS.gene020899.t1 AT2G44745 52.703 74 35 0 232 305 130 203 1.26e-21 92.8
MS.gene020899.t1 AT2G44745 46.479 71 37 1 90 159 143 213 9.21e-12 64.7
MS.gene020899.t1 AT4G18170 60.526 76 30 0 232 307 157 232 1.43e-21 94.7
MS.gene020899.t1 AT4G18170 51.667 60 28 1 92 150 172 231 3.76e-11 64.3
MS.gene020899.t1 AT4G01720 55.844 77 32 2 232 306 224 300 2.10e-21 96.3
MS.gene020899.t1 AT5G49520 56.250 80 34 1 232 310 206 285 2.71e-21 95.1
MS.gene020899.t1 AT5G49520 50.847 59 28 1 93 150 222 280 5.56e-11 64.3
MS.gene020899.t1 AT2G46130 55.714 70 31 0 234 303 17 86 5.65e-21 87.4
MS.gene020899.t1 AT2G46130 43.750 80 43 2 90 167 28 107 7.49e-14 67.8
MS.gene020899.t1 AT5G46350 57.895 76 32 0 234 309 170 245 6.55e-21 92.8
MS.gene020899.t1 AT5G13080 42.105 95 55 0 209 303 29 123 1.26e-20 87.8
MS.gene020899.t1 AT5G13080 48.438 64 32 1 90 152 65 128 1.21e-12 65.5
MS.gene020899.t1 AT4G39410 54.054 74 34 0 232 305 208 281 2.32e-20 90.9
MS.gene020899.t1 AT5G41570 37.671 146 75 3 158 303 25 154 3.51e-20 87.4
MS.gene020899.t1 AT5G41570 43.333 90 43 3 90 177 96 179 9.19e-14 69.7
MS.gene020899.t1 AT1G64000 51.429 70 34 0 234 303 101 170 4.91e-20 87.8
MS.gene020899.t1 AT1G64000 43.902 82 44 2 88 167 110 191 2.96e-14 71.2
MS.gene020899.t1 AT5G15130 52.000 75 35 1 233 306 213 287 7.35e-20 91.7
MS.gene020899.t1 AT5G15130 52.000 75 35 1 233 306 171 245 8.03e-20 91.3
MS.gene020899.t1 AT1G69310 57.143 70 30 0 234 303 134 203 3.69e-19 87.4
MS.gene020899.t1 AT1G69310 52.632 57 26 1 92 147 147 203 7.21e-11 63.2
MS.gene020899.t1 AT1G69310 57.143 70 30 0 234 303 134 203 3.69e-19 87.4
MS.gene020899.t1 AT1G69310 52.632 57 26 1 92 147 147 203 7.21e-11 63.2
MS.gene020899.t1 AT1G69310 57.143 70 30 0 234 303 134 203 3.69e-19 87.4
MS.gene020899.t1 AT1G69310 52.632 57 26 1 92 147 147 203 7.21e-11 63.2
MS.gene020899.t1 AT3G01970 50.704 71 35 0 233 303 51 121 5.44e-19 83.2
MS.gene020899.t1 AT3G62340 57.143 70 30 0 234 303 105 174 1.58e-18 85.1
MS.gene020899.t1 AT3G62340 52.542 59 27 1 93 150 119 177 1.67e-11 64.7
MS.gene020899.t1 AT4G31800 49.275 69 34 1 239 306 103 171 2.10e-18 84.3
MS.gene020899.t1 AT1G18860 50.000 76 37 1 232 306 224 299 2.30e-18 87.0
MS.gene020899.t1 AT4G31800 47.887 71 36 1 239 308 168 238 2.64e-18 85.1
MS.gene020899.t1 AT5G43290 32.836 134 80 1 243 376 110 233 1.08e-17 82.8
MS.gene020899.t1 AT2G25000 53.226 62 28 1 246 306 102 163 1.91e-17 81.3
MS.gene020899.t1 AT2G25000 53.226 62 28 1 246 306 102 163 1.91e-17 81.3
MS.gene020899.t1 AT2G25000 36.567 134 74 4 243 372 121 247 3.00e-17 81.3
MS.gene020899.t1 AT2G25000 36.567 134 74 4 243 372 142 268 3.59e-17 81.3
MS.gene020899.t1 AT2G21900 48.485 66 34 0 242 307 104 169 5.05e-17 79.3
MS.gene020899.t1 AT2G21900 40.000 80 47 1 72 150 89 168 8.04e-12 64.3
MS.gene020899.t1 AT2G23320 41.121 107 45 3 215 303 191 297 5.66e-17 81.3
MS.gene020899.t1 AT1G69810 50.649 77 36 2 232 306 130 206 5.79e-17 81.6
MS.gene020899.t1 AT1G69810 50.649 77 36 2 232 306 188 264 7.98e-17 81.6
MS.gene020899.t1 AT5G28650 57.895 57 23 1 248 303 263 319 2.14e-16 80.1
MS.gene020899.t1 AT3G01080 51.562 64 31 0 88 151 201 264 2.50e-16 79.7
MS.gene020899.t1 AT3G01080 56.250 64 27 1 246 309 204 266 5.36e-15 75.9
MS.gene020899.t1 AT1G80840 43.590 78 41 2 233 307 130 207 2.64e-16 79.3
MS.gene020899.t1 AT2G46130 51.429 70 30 1 234 303 17 82 2.93e-16 74.3
MS.gene020899.t1 AT5G52830 41.593 113 63 3 230 340 149 260 3.83e-16 79.3
MS.gene020899.t1 AT5G52830 45.588 68 35 2 85 150 158 225 1.02e-11 66.2
MS.gene020899.t1 AT2G24570 56.140 57 24 1 248 303 244 300 6.23e-16 78.6
MS.gene020899.t1 AT3G04670 57.895 57 23 1 248 303 263 319 6.43e-16 78.6
MS.gene020899.t1 AT4G24240 47.222 72 37 1 234 304 268 339 7.82e-16 78.6
MS.gene020899.t1 AT4G31550 54.386 57 25 1 248 303 246 302 4.61e-15 75.9
MS.gene020899.t1 AT4G31550 54.386 57 25 1 248 303 247 303 4.70e-15 75.9
MS.gene020899.t1 AT4G23550 45.333 75 40 1 236 309 129 203 9.48e-15 74.7
MS.gene020899.t1 AT2G30590 54.386 57 25 1 248 303 314 370 1.35e-14 75.1
MS.gene020899.t1 AT1G69310 52.857 70 29 1 234 303 134 199 1.77e-14 73.6
MS.gene020899.t1 AT1G29280 50.820 61 29 1 247 306 74 134 4.63e-14 72.0
MS.gene020899.t1 AT3G58710 40.566 106 56 2 203 307 32 131 3.06e-13 69.7
MS.gene020899.t1 AT3G58710 44.578 83 39 2 226 307 56 132 1.11e-12 68.2
MS.gene020899.t1 AT4G01250 48.438 64 32 1 247 309 128 191 1.47e-12 68.2
MS.gene020899.t1 AT2G34830 49.206 63 31 1 248 309 225 287 1.66e-12 68.9
MS.gene020899.t1 AT2G34830 49.206 63 31 1 248 309 216 278 1.74e-12 68.9
MS.gene020899.t1 AT5G01900 43.243 74 38 2 90 159 108 181 3.36e-12 66.6
MS.gene020899.t1 AT5G45260 34.211 114 58 3 41 150 1170 1270 9.52e-12 67.4
MS.gene020899.t1 AT1G30650 47.619 63 32 1 248 309 218 280 1.06e-11 66.6
MS.gene020899.t1 AT1G30650 50.769 65 30 2 88 150 213 277 4.13e-11 64.7
MS.gene020899.t1 AT2G46400 42.254 71 38 1 234 301 91 161 4.31e-11 63.9

Find 77 sgRNAs with CRISPR-Local

Find 110 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTGGTACGGTGTTCGATTC+AGG 0.214848 5.4:+76694422 None:intergenic
TTAAGGGGAGTGAATTTAAA+AGG 0.256917 5.4:-76694556 MS.gene020899:CDS
TACGGTCAGAAAATGGTTAA+AGG 0.320262 5.4:-76693934 MS.gene020899:CDS
AACATTTGCAATTCAGCTTT+GGG 0.332294 5.4:+76693430 None:intergenic
AAACATTTGCAATTCAGCTT+TGG 0.349332 5.4:+76693429 None:intergenic
GGCTATAAATGGCGAAAGTA+TGG 0.352648 5.4:-76694590 MS.gene020899:CDS
TACGGTGTTCGATTCAGGTT+TGG 0.354133 5.4:+76694427 None:intergenic
CACATCAGCAAAAGAGGATT+GGG 0.369608 5.4:+76694361 None:intergenic
TCACAAAAGATGGCTATAAA+TGG 0.370905 5.4:-76694601 MS.gene020899:CDS
ACGGTGTTCGATTCAGGTTT+GGG 0.376118 5.4:+76694428 None:intergenic
ATCGCTGATAGTATCTTCTT+TGG 0.377961 5.4:+76693538 None:intergenic
GCGCAAATACGGTCAGAAAA+TGG 0.379435 5.4:-76693941 MS.gene020899:CDS
CAATTCATGCGAAGGAGTCT+TGG 0.392943 5.4:+76694673 None:intergenic
TGATGCTATGGCTTGTGAAT+TGG 0.396331 5.4:-76694738 MS.gene020899:CDS
AATTCATGCGAAGGAGTCTT+GGG 0.399844 5.4:+76694674 None:intergenic
TGTTCTTCCTGTTGTTGAAA+AGG 0.414481 5.4:-76694390 MS.gene020899:CDS
GTTCTTCCTGTTGTTGAAAA+GGG 0.420197 5.4:-76694389 MS.gene020899:CDS
GGAAGGATGGTCGCTCGAAT+TGG 0.420254 5.4:+76693620 None:intergenic
AACTGTCATAACTACCTATG+AGG 0.422219 5.4:-76693708 MS.gene020899:CDS
ACCTTCCACATCAGCAAAAG+AGG 0.424951 5.4:+76694355 None:intergenic
GGGGCTCTGTGAATGTTGCT+CGG 0.428148 5.4:+76694694 None:intergenic
CAAACTTGAATCACGTATCA+TGG 0.436403 5.4:+76693514 None:intergenic
TACTATCGATGCTCGAGTCC+CGG 0.444280 5.4:-76693776 MS.gene020899:CDS
CGTGAAAAGGTCACAAAAGA+TGG 0.457293 5.4:-76694611 MS.gene020899:CDS
CCACATCAGCAAAAGAGGAT+TGG 0.467103 5.4:+76694360 None:intergenic
GTTCGAACTACAAGTGAGTC+TGG 0.468907 5.4:-76693988 MS.gene020899:CDS
TCTGCAACAGATGTTGTACT+AGG 0.469915 5.4:+76693458 None:intergenic
GAATTGCCTCCGATGCAATC+TGG 0.477882 5.4:-76694656 MS.gene020899:CDS
GGGTATCGCTGGCGCAAATA+CGG 0.478104 5.4:-76693952 MS.gene020899:CDS
GGGCTCTGTGAATGTTGCTC+GGG 0.482480 5.4:+76694695 None:intergenic
AACACGATCAACCGGTGGTA+CGG 0.488236 5.4:+76694409 None:intergenic
ACCCTCCATAATACGTGAAA+AGG 0.489089 5.4:-76694624 MS.gene020899:CDS
ACAGGAAGAACACGATCAAC+CGG 0.492427 5.4:+76694401 None:intergenic
CTCTGTGAATGTTGCTCGGG+CGG 0.495254 5.4:+76694698 None:intergenic
ATGATCATGTTGACCCTCAT+AGG 0.497230 5.4:+76693694 None:intergenic
AAGACCCTGGTTAGGAAGGA+TGG 0.500400 5.4:+76693607 None:intergenic
AATAGTAACAACGATGCGAC+TGG 0.513117 5.4:-76694045 MS.gene020899:CDS
CATGTACCTCCCACTGGAAG+AGG 0.517977 5.4:-76693674 MS.gene020899:CDS
GTATGAATCTGTGCCTCGAC+AGG 0.524519 5.4:-76694228 MS.gene020899:CDS
TTTGCTGATGTGGAAGGTCA+AGG 0.525864 5.4:-76694350 MS.gene020899:intron
AGCGACCATCCTTCCTAACC+AGG 0.527054 5.4:-76693612 MS.gene020899:CDS
CTGCAACAGATGTTGTACTA+GGG 0.534339 5.4:+76693459 None:intergenic
TGAATCGAACACCGTACCAC+CGG 0.534719 5.4:-76694420 MS.gene020899:CDS
TTGTAAATGATGGGTATCGC+TGG 0.545679 5.4:-76693963 MS.gene020899:CDS
TTTGCAATTCAGCTTTGGGC+GGG 0.553028 5.4:+76693434 None:intergenic
TACGAAGATTGCAGTTACAT+TGG 0.556013 5.4:-76694464 MS.gene020899:CDS
CGCAAAGGTGTGACCTGTCG+AGG 0.560873 5.4:+76694215 None:intergenic
GAGTCTGGAATTGTAAATGA+TGG 0.567590 5.4:-76693973 MS.gene020899:CDS
TCATGTTCACTTAATCTGCA+TGG 0.576789 5.4:+76693485 None:intergenic
AGGGAGATTGCATTGTCACA+AGG 0.576933 5.4:-76694797 MS.gene020899:CDS
TTCATGGACACCTCTTCCAG+TGG 0.585110 5.4:+76693664 None:intergenic
TCATGGACACCTCTTCCAGT+GGG 0.592212 5.4:+76693665 None:intergenic
CTGTCTTGACCAGATTGCAT+CGG 0.594317 5.4:+76694647 None:intergenic
GCAGCGAGTGAGTCCTCAGA+GGG 0.598264 5.4:-76694816 MS.gene020899:CDS
TCTTAAAAGTGAAACAAATG+AGG 0.601629 5.4:-76693588 MS.gene020899:CDS
ATCGGAGGCAATTCATGCGA+AGG 0.602766 5.4:+76694665 None:intergenic
ACTGGAGCTGATGTGTCAAA+TGG 0.603473 5.4:-76694027 MS.gene020899:CDS
TCTTGACCAGATTGCATCGG+AGG 0.603924 5.4:+76694650 None:intergenic
CATGATCATGTACCTCCCAC+TGG 0.604796 5.4:-76693680 MS.gene020899:CDS
ACTGTCATAACTACCTATGA+GGG 0.609013 5.4:-76693707 MS.gene020899:CDS
AGTGTCGGATTCTGATGCTA+TGG 0.614930 5.4:-76694750 MS.gene020899:CDS
GGGAGATTGCATTGTCACAA+GGG 0.616469 5.4:-76694796 MS.gene020899:CDS
TGCAACAGATGTTGTACTAG+GGG 0.619132 5.4:+76693460 None:intergenic
GAAGGTGGATGGAAACGCAA+AGG 0.633047 5.4:+76694200 None:intergenic
AGTCTGGAATTGTAAATGAT+GGG 0.636147 5.4:-76693972 MS.gene020899:CDS
ATTTGCAATTCAGCTTTGGG+CGG 0.641316 5.4:+76693433 None:intergenic
CGCGAACTGACGAGTCAAAG+CGG 0.647499 5.4:-76694169 MS.gene020899:CDS
AGCAGCGAGTGAGTCCTCAG+AGG 0.650168 5.4:-76694817 MS.gene020899:CDS
TTAAAGGCAACACAAATCCA+AGG 0.658587 5.4:-76693918 MS.gene020899:intron
GACAATGCAATCTCCCTCTG+AGG 0.667746 5.4:+76694803 None:intergenic
ACATCAGCAAAAGAGGATTG+GGG 0.677148 5.4:+76694362 None:intergenic
ATTCATGCGAAGGAGTCTTG+GGG 0.682503 5.4:+76694675 None:intergenic
TGGACACCTCTTCCAGTGGG+AGG 0.683929 5.4:+76693668 None:intergenic
GCGACCATCCTTCCTAACCA+GGG 0.690672 5.4:-76693611 MS.gene020899:CDS
TCAGCAAAAGAGGATTGGGG+CGG 0.712005 5.4:+76694365 None:intergenic
GGAAGAACACGATCAACCGG+TGG 0.725841 5.4:+76694404 None:intergenic
CAATTTCAGATATCACACGA+TGG 0.729225 5.4:-76694491 MS.gene020899:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TCTTAATATATTTTACTGTA+TGG - chr5.4:76694035-76694054 MS.gene020899:CDS 15.0%
!! ATAAAATAATGCATCTTGAA+AGG + chr5.4:76694435-76694454 None:intergenic 20.0%
!! TTTACAATATGATATCAAAC+AGG - chr5.4:76694234-76694253 MS.gene020899:CDS 20.0%
!!! ATTAAGAGTTTTTTCATGTA+AGG + chr5.4:76694022-76694041 None:intergenic 20.0%
! TCTTAAAAGTGAAACAAATG+AGG - chr5.4:76694723-76694742 MS.gene020899:CDS 25.0%
!! ATTTTGTAGGTGTATTTTCA+TGG + chr5.4:76694666-76694685 None:intergenic 25.0%
TCACAAAAGATGGCTATAAA+TGG - chr5.4:76693710-76693729 MS.gene020899:CDS 30.0%
TGTAGCTAAAAATGAAGTGT+CGG - chr5.4:76693546-76693565 MS.gene020899:CDS 30.0%
TTAAGGGGAGTGAATTTAAA+AGG - chr5.4:76693755-76693774 MS.gene020899:CDS 30.0%
! ACTCCAACAATTCTAGAAAA+TGG + chr5.4:76694183-76694202 None:intergenic 30.0%
! AGTCTGGAATTGTAAATGAT+GGG - chr5.4:76694339-76694358 MS.gene020899:intron 30.0%
! GATAGTAATTTCTGGAAGAT+TGG + chr5.4:76694522-76694541 None:intergenic 30.0%
!! ATCTGAAATTGTTTTCTTGC+AGG + chr5.4:76693811-76693830 None:intergenic 30.0%
!! TCTGAAATTGTTTTCTTGCA+GGG + chr5.4:76693810-76693829 None:intergenic 30.0%
!!! TGACCATTTTCTAGAATTGT+TGG - chr5.4:76694177-76694196 MS.gene020899:CDS 30.0%
AACTGTCATAACTACCTATG+AGG - chr5.4:76694603-76694622 MS.gene020899:CDS 35.0%
ACTGTCATAACTACCTATGA+GGG - chr5.4:76694604-76694623 MS.gene020899:CDS 35.0%
ATCGCTGATAGTATCTTCTT+TGG + chr5.4:76694776-76694795 None:intergenic 35.0%
CAAACTTGAATCACGTATCA+TGG + chr5.4:76694800-76694819 None:intergenic 35.0%
CAATTTCAGATATCACACGA+TGG - chr5.4:76693820-76693839 MS.gene020899:intron 35.0%
GTTCTTCCTGTTGTTGAAAA+GGG - chr5.4:76693922-76693941 MS.gene020899:CDS 35.0%
TACGAAGATTGCAGTTACAT+TGG - chr5.4:76693847-76693866 MS.gene020899:intron 35.0%
TACGGTCAGAAAATGGTTAA+AGG - chr5.4:76694377-76694396 MS.gene020899:CDS 35.0%
TATGGCCAGAAAAACGTTAA+GGG - chr5.4:76693739-76693758 MS.gene020899:CDS 35.0%
TCATGTTCACTTAATCTGCA+TGG + chr5.4:76694829-76694848 None:intergenic 35.0%
TGTTCTTCCTGTTGTTGAAA+AGG - chr5.4:76693921-76693940 MS.gene020899:CDS 35.0%
TTAAAGGCAACACAAATCCA+AGG - chr5.4:76694393-76694412 MS.gene020899:CDS 35.0%
! ACCTTTTCACGTATTATGGA+GGG + chr5.4:76693691-76693710 None:intergenic 35.0%
! CGAATTGGAGTCAATTTTGT+AGG + chr5.4:76694679-76694698 None:intergenic 35.0%
! GAGTCTGGAATTGTAAATGA+TGG - chr5.4:76694338-76694357 MS.gene020899:intron 35.0%
! TCAGTTCGCGAAATTTTTGA+AGG + chr5.4:76694132-76694151 None:intergenic 35.0%
! TGTGACCTTTTCACGTATTA+TGG + chr5.4:76693695-76693714 None:intergenic 35.0%
!! TCTCAACATGCTTTTTGACA+GGG + chr5.4:76694564-76694583 None:intergenic 35.0%
!! TTCTCAACATGCTTTTTGAC+AGG + chr5.4:76694565-76694584 None:intergenic 35.0%
!!! TTGTTTCACTTTTAAGACCC+TGG + chr5.4:76694720-76694739 None:intergenic 35.0%
AATAGTAACAACGATGCGAC+TGG - chr5.4:76694266-76694285 MS.gene020899:intron 40.0%
AATTCATGCGAAGGAGTCTT+GGG + chr5.4:76693640-76693659 None:intergenic 40.0%
ACATCAGCAAAAGAGGATTG+GGG + chr5.4:76693952-76693971 None:intergenic 40.0%
ACCCTCCATAATACGTGAAA+AGG - chr5.4:76693687-76693706 MS.gene020899:CDS 40.0%
ATGATCATGTTGACCCTCAT+AGG + chr5.4:76694620-76694639 None:intergenic 40.0%
ATGGCCAGAAAAACGTTAAG+GGG - chr5.4:76693740-76693759 MS.gene020899:CDS 40.0%
CACATCAGCAAAAGAGGATT+GGG + chr5.4:76693953-76693972 None:intergenic 40.0%
CGTGAAAAGGTCACAAAAGA+TGG - chr5.4:76693700-76693719 MS.gene020899:CDS 40.0%
CTGCAACAGATGTTGTACTA+GGG + chr5.4:76694855-76694874 None:intergenic 40.0%
GGCTATAAATGGCGAAAGTA+TGG - chr5.4:76693721-76693740 MS.gene020899:CDS 40.0%
GTATGGCCAGAAAAACGTTA+AGG - chr5.4:76693738-76693757 MS.gene020899:CDS 40.0%
TCTGCAACAGATGTTGTACT+AGG + chr5.4:76694856-76694875 None:intergenic 40.0%
TGCAACAGATGTTGTACTAG+GGG + chr5.4:76694854-76694873 None:intergenic 40.0%
! GACCTTTTCACGTATTATGG+AGG + chr5.4:76693692-76693711 None:intergenic 40.0%
! TGATGCTATGGCTTGTGAAT+TGG - chr5.4:76693573-76693592 MS.gene020899:CDS 40.0%
!! CGAGCATCGATAGTAATTTC+TGG + chr5.4:76694530-76694549 None:intergenic 40.0%
!! GACAGTTGTTGTGTTTTGAG+AGG + chr5.4:76694590-76694609 None:intergenic 40.0%
!! GCGAAATTTTTGAAGGTGGA+TGG + chr5.4:76694125-76694144 None:intergenic 40.0%
!! GGTTTTGTCACAAGAAAGTG+CGG - chr5.4:76693444-76693463 MS.gene020899:CDS 40.0%
!! GTTCGCGAAATTTTTGAAGG+TGG + chr5.4:76694129-76694148 None:intergenic 40.0%
!! TTGTAAATGATGGGTATCGC+TGG - chr5.4:76694348-76694367 MS.gene020899:intron 40.0%
!!! TCACTTTTAAGACCCTGGTT+AGG + chr5.4:76694715-76694734 None:intergenic 40.0%
!!! TTTTAAGACCCTGGTTAGGA+AGG + chr5.4:76694711-76694730 None:intergenic 40.0%
AATCCAAGGTACACACATCG+TGG - chr5.4:76694407-76694426 MS.gene020899:CDS 45.0%
ACAGGAAGAACACGATCAAC+CGG + chr5.4:76693913-76693932 None:intergenic 45.0%
ACCTTCCACATCAGCAAAAG+AGG + chr5.4:76693959-76693978 None:intergenic 45.0%
ACTGGAGCTGATGTGTCAAA+TGG - chr5.4:76694284-76694303 MS.gene020899:intron 45.0%
AGGGAGATTGCATTGTCACA+AGG - chr5.4:76693514-76693533 MS.gene020899:CDS 45.0%
ATTCATGCGAAGGAGTCTTG+GGG + chr5.4:76693639-76693658 None:intergenic 45.0%
CAATTCATGCGAAGGAGTCT+TGG + chr5.4:76693641-76693660 None:intergenic 45.0%
CCACATCAGCAAAAGAGGAT+TGG + chr5.4:76693954-76693973 None:intergenic 45.0%
CTGTCTTGACCAGATTGCAT+CGG + chr5.4:76693667-76693686 None:intergenic 45.0%
GCGCAAATACGGTCAGAAAA+TGG - chr5.4:76694370-76694389 MS.gene020899:CDS 45.0%
GGGAGATTGCATTGTCACAA+GGG - chr5.4:76693515-76693534 MS.gene020899:CDS 45.0%
GTTCGAACTACAAGTGAGTC+TGG - chr5.4:76694323-76694342 MS.gene020899:intron 45.0%
TTTGCTGATGTGGAAGGTCA+AGG - chr5.4:76693961-76693980 MS.gene020899:CDS 45.0%
! ACGGTGTTCGATTCAGGTTT+GGG + chr5.4:76693886-76693905 None:intergenic 45.0%
! AGTGTCGGATTCTGATGCTA+TGG - chr5.4:76693561-76693580 MS.gene020899:CDS 45.0%
! CACTCCCCTTAACGTTTTTC+TGG + chr5.4:76693747-76693766 None:intergenic 45.0%
! CCAATCCTCTTTTGCTGATG+TGG - chr5.4:76693951-76693970 MS.gene020899:CDS 45.0%
! TACGGTGTTCGATTCAGGTT+TGG + chr5.4:76693887-76693906 None:intergenic 45.0%
! TCCTCTTTTGCTGATGTGGA+AGG - chr5.4:76693955-76693974 MS.gene020899:CDS 45.0%
!! ATGCTTTTTGACAGGGCATC+CGG + chr5.4:76694557-76694576 None:intergenic 45.0%
AACACGATCAACCGGTGGTA+CGG + chr5.4:76693905-76693924 None:intergenic 50.0%
AAGACCCTGGTTAGGAAGGA+TGG + chr5.4:76694707-76694726 None:intergenic 50.0%
ATCGGAGGCAATTCATGCGA+AGG + chr5.4:76693649-76693668 None:intergenic 50.0%
CATGATCATGTACCTCCCAC+TGG - chr5.4:76694631-76694650 MS.gene020899:CDS 50.0%
GAAGGTGGATGGAAACGCAA+AGG + chr5.4:76694114-76694133 None:intergenic 50.0%
GAATTGCCTCCGATGCAATC+TGG - chr5.4:76693655-76693674 MS.gene020899:CDS 50.0%
GACAATGCAATCTCCCTCTG+AGG + chr5.4:76693511-76693530 None:intergenic 50.0%
GATCCACGATGTGTGTACCT+TGG + chr5.4:76694413-76694432 None:intergenic 50.0%
GTATGAATCTGTGCCTCGAC+AGG - chr5.4:76694083-76694102 MS.gene020899:intron 50.0%
TACTATCGATGCTCGAGTCC+CGG - chr5.4:76694535-76694554 MS.gene020899:CDS 50.0%
TCAGCAAAAGAGGATTGGGG+CGG + chr5.4:76693949-76693968 None:intergenic 50.0%
TCATGGACACCTCTTCCAGT+GGG + chr5.4:76694649-76694668 None:intergenic 50.0%
TCTTGACCAGATTGCATCGG+AGG + chr5.4:76693664-76693683 None:intergenic 50.0%
TGAATCGAACACCGTACCAC+CGG - chr5.4:76693891-76693910 MS.gene020899:intron 50.0%
TTCATGGACACCTCTTCCAG+TGG + chr5.4:76694650-76694669 None:intergenic 50.0%
!! TGCTTTTTGACAGGGCATCC+GGG + chr5.4:76694556-76694575 None:intergenic 50.0%
AGCGACCATCCTTCCTAACC+AGG - chr5.4:76694699-76694718 MS.gene020899:CDS 55.0%
CATGTACCTCCCACTGGAAG+AGG - chr5.4:76694637-76694656 MS.gene020899:CDS 55.0%
CGCGAACTGACGAGTCAAAG+CGG - chr5.4:76694142-76694161 MS.gene020899:intron 55.0%
CTCTGTGAATGTTGCTCGGG+CGG + chr5.4:76693616-76693635 None:intergenic 55.0%
GCGACCATCCTTCCTAACCA+GGG - chr5.4:76694700-76694719 MS.gene020899:CDS 55.0%
GGAAGAACACGATCAACCGG+TGG + chr5.4:76693910-76693929 None:intergenic 55.0%
GGAAGGATGGTCGCTCGAAT+TGG + chr5.4:76694694-76694713 None:intergenic 55.0%
GGGCTCTGTGAATGTTGCTC+GGG + chr5.4:76693619-76693638 None:intergenic 55.0%
GGGGCTCTGTGAATGTTGCT+CGG + chr5.4:76693620-76693639 None:intergenic 55.0%
GGTGGTACGGTGTTCGATTC+AGG + chr5.4:76693892-76693911 None:intergenic 55.0%
! GGCGGTCCCTTTTCAACAAC+AGG + chr5.4:76693931-76693950 None:intergenic 55.0%
! GGGTATCGCTGGCGCAAATA+CGG - chr5.4:76694359-76694378 MS.gene020899:CDS 55.0%
AGCAGCGAGTGAGTCCTCAG+AGG - chr5.4:76693494-76693513 MS.gene020899:CDS 60.0%
GCAGCGAGTGAGTCCTCAGA+GGG - chr5.4:76693495-76693514 MS.gene020899:CDS 60.0%
TGGACACCTCTTCCAGTGGG+AGG + chr5.4:76694646-76694665 None:intergenic 60.0%
! CGCAAAGGTGTGACCTGTCG+AGG + chr5.4:76694099-76694118 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 76693442 76694891 76693442 ID=MS.gene020899
chr5.4 mRNA 76693442 76694891 76693442 ID=MS.gene020899.t1;Parent=MS.gene020899
chr5.4 exon 76694351 76694891 76694351 ID=MS.gene020899.t1.exon1;Parent=MS.gene020899.t1
chr5.4 CDS 76694351 76694891 76694351 ID=cds.MS.gene020899.t1;Parent=MS.gene020899.t1
chr5.4 exon 76694167 76694266 76694167 ID=MS.gene020899.t1.exon2;Parent=MS.gene020899.t1
chr5.4 CDS 76694167 76694266 76694167 ID=cds.MS.gene020899.t1;Parent=MS.gene020899.t1
chr5.4 exon 76693919 76694077 76693919 ID=MS.gene020899.t1.exon3;Parent=MS.gene020899.t1
chr5.4 CDS 76693919 76694077 76693919 ID=cds.MS.gene020899.t1;Parent=MS.gene020899.t1
chr5.4 exon 76693442 76693802 76693442 ID=MS.gene020899.t1.exon4;Parent=MS.gene020899.t1
chr5.4 CDS 76693442 76693802 76693442 ID=cds.MS.gene020899.t1;Parent=MS.gene020899.t1
Gene Sequence

>MS.gene020899

ATGGTTTTGTCACAAGAAAGTGCGGATCACAACGTTTCTTCTGATAAAGTACAGCAGCGAGTGAGTCCTCAGAGGGAGATTGCATTGTCACAAGGGATTGATGATGTAGCTAAAAATGAAGTGTCGGATTCTGATGCTATGGCTTGTGAATTGGTGTCGTCACACTCTTCACCGCCCGAGCAACATTCACAGAGCCCCAAGACTCCTTCGCATGAATTGCCTCCGATGCAATCTGGTCAAGACAGACCCTCCATAATACGTGAAAAGGTCACAAAAGATGGCTATAAATGGCGAAAGTATGGCCAGAAAAACGTTAAGGGGAGTGAATTTAAAAGGAGTTATTACAAATGTACTTATTCAGACTGCCCTGCAAGAAAACAATTTCAGATATCACACGATGGAAACTACGAAGATTGCAGTTACATTGGTCAGCATAATCATCCCAAACCTGAATCGAACACCGTACCACCGGTTGATCGTGTTCTTCCTGTTGTTGAAAAGGGACCGCCCCAATCCTCTTTTGCTGATGTGGAAGGTCAAGGTGAGAAGTAAACTTTGTTAGTATTTTAGTTTTCGTCCTTACATGAAAAAACTCTTAATATATTTTACTGTATGGTGCATGCAGAAAATTCATCTGTTGAGTATGAATCTGTGCCTCGACAGGTCACACCTTTGCGTTTCCATCCACCTTCAAAAATTTCGCGAACTGACGAGTCAAAGCGGCTGTACGTTATTTGACCATTTTCTAGAATTGTTGGAGTTGATACATGCGATATCTAACATTTAATTTACTTTACAATATGATATCAAACAGGAAGAAAGACAATAGTAACAACGATGCGACTGGAGCTGATGTGTCAAATGGTGAATCTCGCGTTATTGTTCGAACTACAAGTGAGTCTGGAATTGTAAATGATGGGTATCGCTGGCGCAAATACGGTCAGAAAATGGTTAAAGGCAACACAAATCCAAGGTACACACATCGTGGATCCTTTCAAGATGCATTATTTTATCTCTCTTTCTCTATGTGCTCACAAATTCATGAAACGATTTAAACTAATTGATTGCATTTTCTTTCCAATCTTCCAGAAATTACTATCGATGCTCGAGTCCCGGATGCCCTGTCAAAAAGCATGTTGAGAAGTCCTCTCAAAACACAACAACTGTCATAACTACCTATGAGGGTCAACATGATCATGTACCTCCCACTGGAAGAGGTGTCCATGAAAATACACCTACAAAATTGACTCCAATTCGAGCGACCATCCTTCCTAACCAGGGTCTTAAAAGTGAAACAAATGAGGAAGAGCAACAAAATGAAGATGCTAGTACCAAAGAAGATACTATCAGCGATGCCATGATACGTGATTCAAGTTTGAAAGTTCCATGCAGATTAAGTGAACATGATACCCCTAGTACAACATCTGTTGCAGAACCCGCCCAAAGCTGA
Protein sequence

>MS.gene020899.t1

MVLSQESADHNVSSDKVQQRVSPQREIALSQGIDDVAKNEVSDSDAMACELVSSHSSPPEQHSQSPKTPSHELPPMQSGQDRPSIIREKVTKDGYKWRKYGQKNVKGSEFKRSYYKCTYSDCPARKQFQISHDGNYEDCSYIGQHNHPKPESNTVPPVDRVLPVVEKGPPQSSFADVEGQENSSVEYESVPRQVTPLRFHPPSKISRTDESKRLKKDNSNNDATGADVSNGESRVIVRTTSESGIVNDGYRWRKYGQKMVKGNTNPRNYYRCSSPGCPVKKHVEKSSQNTTTVITTYEGQHDHVPPTGRGVHENTPTKLTPIRATILPNQGLKSETNEEEQQNEDASTKEDTISDAMIRDSSLKVPCRLSEHDTPSTTSVAEPAQS