AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene020982

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene020982.t1 MTR_1g114070 77.477 959 144 11 1 914 1 932 0.0 1414
MS.gene020982.t1 MTR_1g114130 56.885 1053 306 17 1 913 1 1045 0.0 1089
MS.gene020982.t1 MTR_1g114150 67.821 780 215 7 164 913 284 1057 0.0 1075
MS.gene020982.t1 MTR_1g069565 59.456 883 287 9 98 913 10 888 0.0 1013
MS.gene020982.t1 MTR_5g065200 66.760 716 209 5 216 909 129 837 0.0 975
MS.gene020982.t1 MTR_1g069565 54.255 940 302 12 98 913 10 945 0.0 944
MS.gene020982.t1 MTR_1g114150 65.861 662 190 7 164 795 284 939 0.0 878
MS.gene020982.t1 MTR_5g047620 60.843 664 209 10 291 907 139 798 0.0 790
MS.gene020982.t1 MTR_0020s0100 57.711 629 218 10 291 889 81 691 0.0 705
MS.gene020982.t1 MTR_2g024270 44.755 715 334 12 214 904 140 817 0.0 578
MS.gene020982.t1 MTR_4g132540 42.760 739 320 14 227 904 168 864 0.0 572
MS.gene020982.t1 MTR_2g024140 43.954 703 320 14 226 904 33 685 0.0 540
MS.gene020982.t1 MTR_7g117445 42.365 609 293 14 174 735 77 674 7.20e-145 451
MS.gene020982.t1 MTR_7g117445 64.045 89 32 0 757 845 777 865 1.94e-31 132
MS.gene020982.t1 MTR_7g117445 42.200 609 294 13 174 735 77 674 1.57e-144 452
MS.gene020982.t1 MTR_7g117445 61.486 148 57 0 757 904 777 924 1.82e-54 205
MS.gene020982.t1 MTR_7g117445 42.200 609 294 13 174 735 77 674 1.90e-144 452
MS.gene020982.t1 MTR_7g117445 61.486 148 57 0 757 904 777 924 1.88e-54 205
MS.gene020982.t1 MTR_7g117445 42.200 609 294 13 174 735 77 674 6.34e-144 452
MS.gene020982.t1 MTR_7g117445 61.486 148 57 0 757 904 777 924 2.28e-54 205
MS.gene020982.t1 MTR_1g083120 35.607 733 402 14 217 905 186 892 3.93e-143 449
MS.gene020982.t1 MTR_1g083120 35.607 733 402 14 217 905 203 909 6.84e-143 449
MS.gene020982.t1 MTR_1g008060 46.589 513 256 10 224 731 858 1357 3.57e-128 424
MS.gene020982.t1 MTR_1g008060 66.176 136 46 0 760 895 1542 1677 2.48e-52 200
MS.gene020982.t1 MTR_1g008060 46.589 513 256 10 224 731 867 1366 4.50e-128 424
MS.gene020982.t1 MTR_1g008060 66.176 136 46 0 760 895 1551 1686 2.56e-52 200
MS.gene020982.t1 MTR_1g083120 34.548 686 378 15 217 857 186 845 6.62e-124 395
MS.gene020982.t1 MTR_1g083120 34.815 675 370 14 217 847 186 834 1.44e-123 395
MS.gene020982.t1 MTR_2g011630 32.715 755 422 13 227 903 207 953 1.58e-119 387
MS.gene020982.t1 MTR_8g062940 52.137 351 141 3 227 569 33 364 1.67e-112 350
MS.gene020982.t1 MTR_2g011630 33.233 665 360 11 309 896 45 702 7.32e-108 350
MS.gene020982.t1 MTR_2g011630 33.233 665 360 11 309 896 77 734 1.65e-107 350
MS.gene020982.t1 MTR_4g091520 35.559 599 280 15 393 905 699 1277 2.55e-100 341
MS.gene020982.t1 MTR_4g091520 35.227 176 102 4 227 392 260 433 6.89e-25 112
MS.gene020982.t1 MTR_2g024240 54.704 287 118 3 583 869 114 388 3.52e-99 316
MS.gene020982.t1 MTR_5g098590 84.106 151 24 0 60 210 1 151 2.71e-77 248
MS.gene020982.t1 MTR_4g091520 39.169 337 178 10 393 721 629 946 5.53e-60 223
MS.gene020982.t1 MTR_4g091520 35.227 176 102 4 227 392 260 433 6.53e-25 112
MS.gene020982.t1 MTR_4g091520 39.169 337 178 10 393 721 664 981 5.69e-60 223
MS.gene020982.t1 MTR_4g091520 35.227 176 102 4 227 392 260 433 5.87e-25 112
MS.gene020982.t1 MTR_4g091520 39.169 337 178 10 393 721 699 1016 6.77e-60 223
MS.gene020982.t1 MTR_4g091520 35.227 176 102 4 227 392 260 433 6.52e-25 112
MS.gene020982.t1 MTR_0295s0020 56.897 174 68 1 574 747 12 178 2.99e-57 195
MS.gene020982.t1 MTR_8g465700 51.685 178 82 1 518 695 4 177 1.09e-51 182
MS.gene020982.t1 MTR_8g465720 69.318 88 26 1 760 847 53 139 1.10e-36 136
MS.gene020982.t1 MTR_8g013920 67.857 84 23 2 608 691 40 119 1.97e-30 119
MS.gene020982.t1 MTR_6g051900 41.500 200 58 7 1 200 1 141 3.66e-21 90.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene020982.t1 AT1G11950 47.361 701 321 11 227 904 193 868 0.0 621
MS.gene020982.t1 AT1G11950 47.361 701 321 11 227 904 193 868 0.0 621
MS.gene020982.t1 AT1G62310 47.315 689 327 9 227 893 209 883 0.0 612
MS.gene020982.t1 AT1G11950 45.426 634 298 11 227 837 193 801 1.38e-174 527
MS.gene020982.t1 AT3G07610 54.125 497 205 4 419 908 415 895 4.59e-173 530
MS.gene020982.t1 AT3G07610 33.224 304 184 5 120 406 32 333 1.57e-44 175
MS.gene020982.t1 AT3G07610 52.132 516 208 5 419 908 415 917 8.63e-166 511
MS.gene020982.t1 AT3G07610 33.224 304 184 5 120 406 32 333 1.44e-44 175
MS.gene020982.t1 AT4G00990 44.747 514 257 11 226 723 79 581 5.65e-129 407
MS.gene020982.t1 AT4G00990 59.804 102 37 1 744 845 673 770 7.55e-31 130
MS.gene020982.t1 AT4G00990 44.747 514 257 11 226 723 79 581 6.94e-129 407
MS.gene020982.t1 AT4G00990 56.364 110 44 1 744 853 673 778 4.17e-31 131
MS.gene020982.t1 AT4G00990 44.747 514 257 11 226 723 79 581 2.10e-128 407
MS.gene020982.t1 AT4G00990 59.006 161 62 1 744 904 673 829 1.46e-53 201
MS.gene020982.t1 AT1G09060 32.617 745 426 19 203 905 181 891 1.13e-117 381
MS.gene020982.t1 AT1G09060 32.617 745 426 19 203 905 181 891 1.13e-117 381
MS.gene020982.t1 AT1G09060 32.617 745 426 19 203 905 195 905 1.94e-117 381
MS.gene020982.t1 AT1G09060 32.617 745 426 19 203 905 195 905 1.94e-117 381
MS.gene020982.t1 AT4G21430 29.184 723 438 13 222 903 222 911 1.97e-94 318
MS.gene020982.t1 AT3G07610 54.480 279 122 1 419 697 415 688 1.94e-89 301
MS.gene020982.t1 AT3G07610 33.224 304 184 5 120 406 32 333 7.41e-45 174

Find 210 sgRNAs with CRISPR-Local

Find 349 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGATTCCTCTGAACTTAATT+TGG 0.160479 5.4:-78093554 None:intergenic
GCCTCCTTCTGATTTATTTC+AGG 0.172247 5.4:+78095639 MS.gene020982:CDS
GGACTTGTGGAACCTCATTT+TGG 0.208763 5.4:-78093516 None:intergenic
ACATCACTCTCATTCAATTT+AGG 0.211861 5.4:-78093824 None:intergenic
TCGTCAGGAATGGGTTCTTC+TGG 0.213802 5.4:-78092977 None:intergenic
CTTTATATATTCCTTCAATT+TGG 0.229259 5.4:-78096511 None:intergenic
GATACATACTCGATCTTAAT+TGG 0.230110 5.4:-78094488 None:intergenic
ACCCCTTAGAAGGTGCTATC+TGG 0.241380 5.4:+78096463 MS.gene020982:CDS
TGACATTCATTATCGGCTTT+TGG 0.263135 5.4:-78094590 None:intergenic
AGCACCTTGAGCAAGATAAA+AGG 0.269490 5.4:+78096358 MS.gene020982:CDS
GGATTTGTATATTCTTTATA+AGG 0.271748 5.4:-78095703 None:intergenic
AGTACATTGCTGACAATTAC+AGG 0.278275 5.4:-78094902 None:intergenic
TTCTAAATACGATGAAGTTT+TGG 0.278404 5.4:+78094991 MS.gene020982:CDS
ATCCCAGATAGCACCTTCTA+AGG 0.283008 5.4:-78096466 None:intergenic
CTCCGTGGTGGGAAGCTTCT+AGG 0.287089 5.4:+78094455 MS.gene020982:CDS
CCCTTACCATTTGTTCAAAC+AGG 0.304071 5.4:-78093659 None:intergenic
AATGCACGCCACATGACTTT+TGG 0.316385 5.4:-78094953 None:intergenic
GGAATGGGTTCTTCTGGGTC+TGG 0.322740 5.4:-78092971 None:intergenic
CTCGACTTCCTCATCATTGT+TGG 0.339463 5.4:-78094027 None:intergenic
CAACCTTGCTGTGAAGTTGC+CGG 0.339593 5.4:+78095741 MS.gene020982:CDS
AAAAGGGAGCTAGTTGGTTA+TGG 0.357001 5.4:+78096375 MS.gene020982:CDS
AACTTCATCGTATTTAGAAT+TGG 0.357620 5.4:-78094987 None:intergenic
ATGCTCCATAGTCAGATAAA+TGG 0.360391 5.4:-78096829 None:intergenic
TATGGATTTGCTCATGATCT+TGG 0.362682 5.4:+78095808 MS.gene020982:CDS
GTTGAATAACGGTGAAAATT+CGG 0.370609 5.4:+78093162 MS.gene020982:CDS
GCATACCCTGTTTGAACAAA+TGG 0.372456 5.4:+78093653 MS.gene020982:CDS
ATAACATCGGCGTTACTAAC+AGG 0.373933 5.4:-78094752 None:intergenic
TCATACCATTTATCTGACTA+TGG 0.374732 5.4:+78096824 MS.gene020982:CDS
GTCGCAAGGATTGGCGCAAT+TGG 0.374765 5.4:+78095590 MS.gene020982:CDS
AAAGGGAGCTAGTTGGTTAT+GGG 0.379755 5.4:+78096376 MS.gene020982:CDS
TTTGTCTCTCCTGAAAATAT+TGG 0.381247 5.4:+78097470 MS.gene020982:CDS
AATCGTGAGTGGTCAAGATC+TGG 0.383517 5.4:+78094533 MS.gene020982:CDS
TAGAGGAGACTTGTGATAAT+AGG 0.385192 5.4:+78094714 MS.gene020982:CDS
TTGGCGGATCTGTGATTTAT+CGG 0.388855 5.4:-78097530 None:intergenic
GTTGGAGGGGACCCCTTAGA+AGG 0.401130 5.4:+78096453 MS.gene020982:CDS
CGTCAGGAATGGGTTCTTCT+GGG 0.401897 5.4:-78092976 None:intergenic
ATGAAACTTAAGGAGGAGTA+TGG 0.411899 5.4:+78096855 MS.gene020982:CDS
TTCAATGGCACTGGAGCAAA+GGG 0.413215 5.4:+78094876 MS.gene020982:CDS
GAAGTATCCTTCTCATTTCA+AGG 0.417000 5.4:-78094622 None:intergenic
GGAGCATAAGATGAAACTTA+AGG 0.419575 5.4:+78096845 MS.gene020982:CDS
AATGTACTTGAATGTACATC+TGG 0.421952 5.4:+78094917 MS.gene020982:CDS
GAATGGGTTCTTCTGGGTCT+GGG 0.422717 5.4:-78092970 None:intergenic
CTCCCGCGTTTCTTTCTCTC+CGG 0.425830 5.4:-78093466 None:intergenic
ACAGATTTCTATACTGTCCT+AGG 0.426836 5.4:+78094819 MS.gene020982:CDS
AGGTTGAGAGAACCACTAAA+AGG 0.429360 5.4:-78095724 None:intergenic
ATTGAATAACGGTGAAGGTT+CGG 0.432919 5.4:+78093045 MS.gene020982:CDS
GAATGTTGGCGCCGCTGAAA+CGG 0.433221 5.4:+78093018 MS.gene020982:CDS
ACCATGATGACATTCATTAT+CGG 0.447505 5.4:-78094597 None:intergenic
AATGTACATCTGGTTTAAGC+TGG 0.447849 5.4:+78094927 MS.gene020982:CDS
AGGCTCTTCATCATTTCAAC+CGG 0.452508 5.4:+78093447 MS.gene020982:CDS
TTCAACGACGCAGTTTCAGC+AGG 0.452822 5.4:-78093145 None:intergenic
TAAATGGTATGATCATGAAT+GGG 0.458309 5.4:-78096813 None:intergenic
TTCCTCAGTTAAAGCTGCTA+TGG 0.461163 5.4:+78093315 MS.gene020982:CDS
TCTTCCACATTTAAGACGGT+TGG 0.461419 5.4:+78094076 MS.gene020982:CDS
AATATCCACCAATTCTTCAC+TGG 0.461911 5.4:+78095556 MS.gene020982:CDS
ATAAGGAATACCTTGTCTCT+TGG 0.463609 5.4:-78094132 None:intergenic
GTTGTTAGTGAGCAGAATAA+AGG 0.465943 5.4:+78093402 MS.gene020982:CDS
TTACCTTCAGATTTCTGACT+TGG 0.467821 5.4:-78097046 None:intergenic
GTAGGGAGTGTTTCATCGTC+AGG 0.467985 5.4:-78092992 None:intergenic
CTAAAGATGAGCGTGTGATC+TGG 0.471996 5.4:+78094265 MS.gene020982:CDS
GCACCTTGAGCAAGATAAAA+GGG 0.472017 5.4:+78096359 MS.gene020982:CDS
ACACAAGGGGTCGCAAGGAT+TGG 0.472118 5.4:+78095581 MS.gene020982:CDS
TCTTTCAATTTCAACACCTC+AGG 0.472947 5.4:-78095613 None:intergenic
CCCCTTAGAAGGTGCTATCT+GGG 0.478828 5.4:+78096464 MS.gene020982:CDS
TTAATGACAGTAATTTCCTC+AGG 0.479065 5.4:-78096321 None:intergenic
CGGAAGATGAAATGGTAGCT+AGG 0.480642 5.4:+78093287 MS.gene020982:CDS
TTAAGTTTCTTGTGGACTTG+TGG 0.481350 5.4:-78093529 None:intergenic
AGTGTTTCATCGTCAGGAAT+GGG 0.481567 5.4:-78092986 None:intergenic
ATTTGGTATTAAGTTTCTTG+TGG 0.482774 5.4:-78093537 None:intergenic
CAACAGCGACTCCACCGTAT+TGG 0.485762 5.4:-78093263 None:intergenic
ATAAATGGTATGATCATGAA+TGG 0.486755 5.4:-78096814 None:intergenic
GAGTGTTTCATCGTCAGGAA+TGG 0.486924 5.4:-78092987 None:intergenic
GACCTCAAACTTGTCCTTGG+CGG 0.487327 5.4:-78097546 None:intergenic
TACGGTGGAGTCGCTGTTGA+CGG 0.488256 5.4:+78093267 MS.gene020982:CDS
GTATATTTACGCGCATACCT+TGG 0.495273 5.4:-78098190 None:intergenic
GCTGTTGACGGAAGATGAAA+TGG 0.495716 5.4:+78093279 MS.gene020982:CDS
TTGTGTAACCAGTGAAGAAT+TGG 0.496636 5.4:-78095564 None:intergenic
TCAATGTAAAAGAAGTGATA+CGG 0.498201 5.4:+78093588 MS.gene020982:CDS
TTGCTCATGATCTTGGACGT+GGG 0.502037 5.4:+78095815 MS.gene020982:CDS
ATTTGGTTACATCCTCTCTC+CGG 0.503256 5.4:-78096494 None:intergenic
TCCCAGATAGCACCTTCTAA+GGG 0.503286 5.4:-78096465 None:intergenic
ACTATAGGAAATGAAGCATA+AGG 0.507232 5.4:+78093998 MS.gene020982:intron
AGGTGTTGAAATTGAAAGAT+TGG 0.508050 5.4:+78095617 MS.gene020982:CDS
TCAGGCTTTAAACAATAATC+CGG 0.508635 5.4:-78095760 None:intergenic
TGGCTATAAGGTAAATGTGT+TGG 0.509638 5.4:+78096272 MS.gene020982:intron
AGATCTGGGTGGCATGCAAA+TGG 0.510153 5.4:+78094548 MS.gene020982:CDS
GAGAAAGAGAAAAGCGGAGA+AGG 0.511730 5.4:+78093486 MS.gene020982:CDS
GATAGTGACTTGGTGGTTGG+AGG 0.512169 5.4:+78096438 MS.gene020982:CDS
AGAGGATGTAACCAAATTGA+AGG 0.514954 5.4:+78096500 MS.gene020982:CDS
TTTCAATGGCACTGGAGCAA+AGG 0.515097 5.4:+78094875 MS.gene020982:CDS
ACTAACTCGGAGATGCAATT+CGG 0.516957 5.4:-78094647 None:intergenic
GACTTGCAGGAATTGAACCT+TGG 0.517043 5.4:+78096970 MS.gene020982:intron
GTAAAAGAAGTGATACGGGC+AGG 0.518828 5.4:+78093593 MS.gene020982:CDS
AGGCTGTTAATTGCATAGAT+TGG 0.519223 5.4:+78095020 MS.gene020982:CDS
GCGGCGCCAACATTCAAAGT+AGG 0.520480 5.4:-78093010 None:intergenic
TGTATATTCTTTATAAGGCA+AGG 0.521531 5.4:-78095698 None:intergenic
TATGAATCTTGGTGCCAATA+CGG 0.529389 5.4:+78093249 MS.gene020982:CDS
TGAAGAACAAATGATTGAGA+AGG 0.530667 5.4:+78094100 MS.gene020982:CDS
ATCTGTGATTTATCGGAAGC+CGG 0.530939 5.4:-78097523 None:intergenic
GGTGAAAATTCGGTTGAAGC+TGG 0.533484 5.4:+78093172 MS.gene020982:CDS
ACAGCACACAGGACATGCTT+CGG 0.536929 5.4:-78093849 None:intergenic
CCTTACCATTTGTTCAAACA+GGG 0.538038 5.4:-78093658 None:intergenic
ATCCGCCAAGGACAAGTTTG+AGG 0.538260 5.4:+78097544 MS.gene020982:CDS
ACAGACCTCAAACTTGTCCT+TGG 0.538417 5.4:-78097549 None:intergenic
TTGAAATGATGAAGAGCCTC+CGG 0.538715 5.4:-78093443 None:intergenic
GCTAGTTGGTTATGGGGAGG+CGG 0.540172 5.4:+78096383 MS.gene020982:CDS
ATCGTGAGTGGTCAAGATCT+GGG 0.541397 5.4:+78094534 MS.gene020982:CDS
GCCGATAATGAATGTCATCA+TGG 0.542022 5.4:+78094596 MS.gene020982:CDS
CGGCGCCAACATTCAAAGTA+GGG 0.545175 5.4:-78093009 None:intergenic
AACAGATTCTTCTGCTACTG+CGG 0.546201 5.4:-78093206 None:intergenic
GGTGAAGGTTCGGTTGAAGC+TGG 0.546251 5.4:+78093055 MS.gene020982:CDS
ATGGTTTCCTTGAAATGAGA+AGG 0.547108 5.4:+78094615 MS.gene020982:CDS
ACTTGGTGAGGCAAGCCAGC+GGG 0.547254 5.4:-78097029 None:intergenic
GAAGAAAGAGACGTGGTAGC+CGG 0.548621 5.4:+78093424 MS.gene020982:CDS
ACACTCCCTACTTTGAATGT+TGG 0.548991 5.4:+78093004 MS.gene020982:CDS
TCATCCAACCGTCTTAAATG+TGG 0.550657 5.4:-78094080 None:intergenic
CAATGTAAAAGAAGTGATAC+GGG 0.550923 5.4:+78093589 MS.gene020982:CDS
GGAAGATGAAATGGTAGCTA+GGG 0.553295 5.4:+78093288 MS.gene020982:CDS
TTTGCTCATGATCTTGGACG+TGG 0.556810 5.4:+78095814 MS.gene020982:CDS
GAAAATGTCTTAAATCTCCA+TGG 0.559521 5.4:-78094856 None:intergenic
GAAACTGCGTCGTTGAATAA+CGG 0.560168 5.4:+78093151 MS.gene020982:CDS
TGTTGTTGCGAGCTCCGTGG+TGG 0.562600 5.4:+78094443 MS.gene020982:CDS
TTCAGATTTCTGACTTGGTG+AGG 0.565040 5.4:-78097041 None:intergenic
GTTGTTGCGAGCTCCGTGGT+GGG 0.565282 5.4:+78094444 MS.gene020982:CDS
GACTTCTTCCACATTTAAGA+CGG 0.566290 5.4:+78094072 MS.gene020982:CDS
ATGTACATCTGGTTTAAGCT+GGG 0.567172 5.4:+78094928 MS.gene020982:CDS
TATTGTTTAAAGCCTGACAT+GGG 0.567740 5.4:+78095766 MS.gene020982:CDS
TGGTGTAGATCTACAGCCCT+AGG 0.571725 5.4:-78094836 None:intergenic
TTCTTCACTGGTTACACAAG+GGG 0.572201 5.4:+78095568 MS.gene020982:CDS
TTCTCTAAGTATATGCTGAA+AGG 0.574255 5.4:+78094050 MS.gene020982:CDS
CACTAATGATAGTGACTTGG+TGG 0.574412 5.4:+78096431 MS.gene020982:CDS
CAAGATAAAAGGGAGCTAGT+TGG 0.574795 5.4:+78096369 MS.gene020982:CDS
TTTACATTGATGGCACGCTA+AGG 0.575795 5.4:-78093575 None:intergenic
TTATTGTTTAAAGCCTGACA+TGG 0.576650 5.4:+78095765 MS.gene020982:CDS
AAATTGCAGTCCTTTAAAGC+AGG 0.577294 5.4:+78096560 MS.gene020982:CDS
TGCTCATGATCTTGGACGTG+GGG 0.579297 5.4:+78095816 MS.gene020982:CDS
CGTTCCTGAAATAAATCAGA+AGG 0.580684 5.4:-78095643 None:intergenic
TGTAACCAGTGAAGAATTGG+TGG 0.581894 5.4:-78095561 None:intergenic
TGTGTTATTGTGTATAACAT+CGG 0.582130 5.4:-78094765 None:intergenic
TGGTTACACAAGGGGTCGCA+AGG 0.582867 5.4:+78095576 MS.gene020982:CDS
GTTGGCGCATATCGCTAAAG+TGG 0.586598 5.4:+78096290 MS.gene020982:CDS
CTCCATAGCAGCTTTAACTG+AGG 0.586676 5.4:-78093317 None:intergenic
GAAGGAATCCACCCAAAATG+AGG 0.587016 5.4:+78093504 MS.gene020982:CDS
AGAAATTCAGAAGAGGAAGA+TGG 0.587534 5.4:+78093369 MS.gene020982:CDS
CAACCACATTTCAATGGCGG+AGG 0.588641 5.4:+78092892 None:intergenic
GTTTGCTTTACATACTAACT+CGG 0.595572 5.4:-78094660 None:intergenic
AATTAAGCTTCAAGATGTAG+AGG 0.596112 5.4:+78094697 MS.gene020982:CDS
TCATCTTTAGAATGATCCAC+CGG 0.597336 5.4:-78094252 None:intergenic
TAATACCAAATTAAGTTCAG+AGG 0.597446 5.4:+78093549 MS.gene020982:CDS
AATGATAGTGACTTGGTGGT+TGG 0.597880 5.4:+78096435 MS.gene020982:CDS
ATAGTGACTTGGTGGTTGGA+GGG 0.599154 5.4:+78096439 MS.gene020982:CDS
ATTCAATGACGCCGTTTCAG+CGG 0.599511 5.4:-78093029 None:intergenic
GAAAGAGAAGCCAAGAGACA+AGG 0.600316 5.4:+78094122 MS.gene020982:CDS
CACCTAGAAGCTTCCCACCA+CGG 0.601702 5.4:-78094457 None:intergenic
TAAAAGAAGTGATACGGGCA+GGG 0.602379 5.4:+78093594 MS.gene020982:CDS
GAAACGGCGTCATTGAATAA+CGG 0.603965 5.4:+78093034 MS.gene020982:CDS
AGCTTCTGAATAAAAGTCCA+AGG 0.609535 5.4:-78096987 None:intergenic
TCAACGACGCAGTTTCAGCA+GGG 0.610163 5.4:-78093144 None:intergenic
CAGATTTCTATACTGTCCTA+GGG 0.617894 5.4:+78094820 MS.gene020982:CDS
CGCAACAACAGAGGAGACAA+AGG 0.621015 5.4:-78094430 None:intergenic
AACCGGAGAGAAAGAAACGC+GGG 0.621363 5.4:+78093464 MS.gene020982:CDS
AATTCTTCACTGGTTACACA+AGG 0.621883 5.4:+78095566 MS.gene020982:CDS
AGCAGACTCTTCTGTTGCTG+CGG 0.625900 5.4:-78093089 None:intergenic
TAGTGACTTGGTGGTTGGAG+GGG 0.631450 5.4:+78096440 MS.gene020982:CDS
CACGGAGCTCGCAACAACAG+AGG 0.634726 5.4:-78094439 None:intergenic
CATCATCAAACACATTACAA+TGG 0.637797 5.4:-78095855 None:intergenic
TTCGGTTGAAGCTGGTGATG+TGG 0.638000 5.4:+78093063 MS.gene020982:CDS
ACGAGTCTACGAATCGTGAG+TGG 0.638120 5.4:+78094522 MS.gene020982:CDS
TCACCAAGTCAGAAATCTGA+AGG 0.640211 5.4:+78097043 MS.gene020982:CDS
TGACACTAATGATAGTGACT+TGG 0.641602 5.4:+78096428 MS.gene020982:CDS
GGTCGAAACCAACAATGATG+AGG 0.644580 5.4:+78094019 MS.gene020982:CDS
TTCGGTTGAAGCTGGTGATG+TGG 0.646757 5.4:+78093180 MS.gene020982:CDS
CTCTGTTGTTGCGAGCTCCG+TGG 0.650643 5.4:+78094440 MS.gene020982:CDS
TCCTGAAATAAATCAGAAGG+AGG 0.651303 5.4:-78095640 None:intergenic
GGGTGGCATGCAAATGGCGA+TGG 0.651622 5.4:+78094554 MS.gene020982:CDS
GACTTGGTGAGGCAAGCCAG+CGG 0.651967 5.4:-78097030 None:intergenic
GCGTCATTGAATAACGGTGA+AGG 0.653749 5.4:+78093040 MS.gene020982:CDS
ATTGTTTAAAGCCTGACATG+GGG 0.653779 5.4:+78095767 MS.gene020982:CDS
CGTGGTGGGAAGCTTCTAGG+TGG 0.655278 5.4:+78094458 MS.gene020982:CDS
AAGGGAGCTAGTTGGTTATG+GGG 0.655659 5.4:+78096377 MS.gene020982:CDS
CCCAGATAGCACCTTCTAAG+GGG 0.660498 5.4:-78096464 None:intergenic
GAATCTTGGTGCCAATACGG+TGG 0.660922 5.4:+78093252 MS.gene020982:CDS
GAAAGAGACGTGGTAGCCGG+AGG 0.662313 5.4:+78093427 MS.gene020982:CDS
AATCCGGCAACTTCACAGCA+AGG 0.666731 5.4:-78095744 None:intergenic
ATTCTTCACTGGTTACACAA+GGG 0.667170 5.4:+78095567 MS.gene020982:CDS
ACGCGGGAGAAAGAGAAAAG+CGG 0.667642 5.4:+78093480 MS.gene020982:CDS
GATAAATCACAGATCCGCCA+AGG 0.668186 5.4:+78097532 MS.gene020982:CDS
GTTTGACAGAGGAATTCCGC+CGG 0.671961 5.4:+78097504 MS.gene020982:CDS
GCATAAGATGAAACTTAAGG+AGG 0.673984 5.4:+78096848 MS.gene020982:CDS
AACTCGGAGATGCAATTCGG+AGG 0.675073 5.4:-78094644 None:intergenic
GGATTGGCGCAATTGGCCTG+AGG 0.678244 5.4:+78095597 MS.gene020982:CDS
GCTGGGAACCAAAAGTCATG+TGG 0.680165 5.4:+78094945 MS.gene020982:CDS
GGAGCTAGTTGGTTATGGGG+AGG 0.683456 5.4:+78096380 MS.gene020982:CDS
AAATGGTATGATCATGAATG+GGG 0.688068 5.4:-78096812 None:intergenic
CGAGTATGTATCACAGACTG+AGG 0.691844 5.4:+78094499 MS.gene020982:CDS
TAAAGTGGAACTGAAACCTG+AGG 0.692071 5.4:+78096305 MS.gene020982:CDS
TGAGTGCTTGCGTTTGACAG+AGG 0.693789 5.4:+78097493 MS.gene020982:CDS
AGAGGAGACAAAGGTCAAAG+CGG 0.698562 5.4:-78094421 None:intergenic
ATGAACTCAGCATGATGACG+AGG 0.699370 5.4:-78095670 None:intergenic
TATACACAATAACACAACGA+AGG 0.705122 5.4:+78094772 MS.gene020982:CDS
CAACCGGAGAGAAAGAAACG+CGG 0.707826 5.4:+78093463 MS.gene020982:CDS
TTGCAATTATCACAGCACAC+AGG 0.707899 5.4:-78093860 None:intergenic
TGTGATTTATCGGAAGCCGG+CGG 0.708974 5.4:-78097520 None:intergenic
TAATTGCATAGATTGGTGTG+AGG 0.719281 5.4:+78095027 MS.gene020982:CDS
TTACAGGTCTGAGAAAACCA+AGG 0.720333 5.4:+78098173 MS.gene020982:intron
AGGGCTGTAGATCTACACCA+TGG 0.725512 5.4:+78094839 MS.gene020982:CDS
AATAAAGGAAGAAAGAGACG+TGG 0.731452 5.4:+78093417 MS.gene020982:CDS
GCTATGGAGATAATGAAACG+CGG 0.761604 5.4:+78093331 MS.gene020982:CDS
TCAATGGCACTGGAGCAAAG+GGG 0.769506 5.4:+78094877 MS.gene020982:CDS
GTGAGTGGTCAAGATCTGGG+TGG 0.775298 5.4:+78094537 MS.gene020982:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TCATTTTAAAATTTGATATT+CGG + chr5.4:78094187-78094206 MS.gene020982:intron 10.0%
!! ATGAAAATAACTAAGTAATA+TGG + chr5.4:78097641-78097660 MS.gene020982:intron 15.0%
!! ATTTCTAAATTTATGATGAA+GGG + chr5.4:78095058-78095077 MS.gene020982:intron 15.0%
!!! AATATTTTAGTTTATCTCAT+AGG - chr5.4:78097705-78097724 None:intergenic 15.0%
!!! ATAATAACAGTAAAATCTTT+TGG - chr5.4:78095957-78095976 None:intergenic 15.0%
!!! TAATTTCATAATTTGATTTG+TGG + chr5.4:78096132-78096151 MS.gene020982:intron 15.0%
!!! TGATATTAACTATGTTTTTT+TGG + chr5.4:78093782-78093801 MS.gene020982:intron 15.0%
!!! TGTAATCTTATCTTTTAAAT+TGG + chr5.4:78095325-78095344 MS.gene020982:intron 15.0%
!! AAATGATTTGATCATTCAAA+TGG + chr5.4:78096919-78096938 MS.gene020982:intron 20.0%
!! ATAAACTGCAAAGTATATTT+AGG + chr5.4:78096205-78096224 MS.gene020982:intron 20.0%
!! ATGATTGTGATTAAATTTAC+AGG + chr5.4:78098157-78098176 MS.gene020982:intron 20.0%
!! CCAATTACACTAAAAAAAAT+TGG - chr5.4:78095208-78095227 None:intergenic 20.0%
!! CTTTATATATTCCTTCAATT+TGG - chr5.4:78096514-78096533 None:intergenic 20.0%
!! GAAAAACTCAAATAATTAAG+AGG - chr5.4:78095916-78095935 None:intergenic 20.0%
!! GATTTCTAAATTTATGATGA+AGG + chr5.4:78095057-78095076 MS.gene020982:intron 20.0%
!! GGATTTGTATATTCTTTATA+AGG - chr5.4:78095706-78095725 None:intergenic 20.0%
!! TTGAAAAATTAGAGAAAGAA+AGG + chr5.4:78097982-78098001 MS.gene020982:CDS 20.0%
!! TTTCTAAATTTATGATGAAG+GGG + chr5.4:78095059-78095078 MS.gene020982:intron 20.0%
!!! ATTTAGAATTGGTTTTTTGA+CGG - chr5.4:78094979-78094998 None:intergenic 20.0%
!!! CCAATTTTTTTTAGTGTAAT+TGG + chr5.4:78095205-78095224 MS.gene020982:intron 20.0%
!!! CTAAATTTTAGTAGATTGTT+TGG + chr5.4:78097218-78097237 MS.gene020982:intron 20.0%
!!! TAATAATTTGCAACTTTTCA+AGG + chr5.4:78097245-78097264 MS.gene020982:intron 20.0%
!!! TTAAAAAGTGCATAATTTGT+AGG + chr5.4:78095992-78096011 MS.gene020982:intron 20.0%
!!! TTCTGCTTTTTCTATTTATT+AGG + chr5.4:78097594-78097613 MS.gene020982:intron 20.0%
!!! TTTTCTATTATCTAGCTTTA+TGG + chr5.4:78096601-78096620 MS.gene020982:intron 20.0%
! AAATGAACAGATAAATGCAT+TGG - chr5.4:78096042-78096061 None:intergenic 25.0%
! AACAATTTGCAAGAAATCAT+AGG - chr5.4:78097321-78097340 None:intergenic 25.0%
! AACTATTATTCATTACAAGC+TGG - chr5.4:78096738-78096757 None:intergenic 25.0%
! AAGATTTCATACATTCAACA+AGG - chr5.4:78097813-78097832 None:intergenic 25.0%
! ATAAATGGTATGATCATGAA+TGG - chr5.4:78096817-78096836 None:intergenic 25.0%
! ATAATTGAAATGAATCCATC+TGG + chr5.4:78093972-78093991 MS.gene020982:intron 25.0%
! ATTTGAGTATATTGTGTATG+TGG + chr5.4:78098125-78098144 MS.gene020982:intron 25.0%
! ATTTGGTATTAAGTTTCTTG+TGG - chr5.4:78093540-78093559 None:intergenic 25.0%
! CAAAAAATATATACGCTTCT+TGG - chr5.4:78097103-78097122 None:intergenic 25.0%
! CAAATTACAAAGAATTGATC+AGG - chr5.4:78096254-78096273 None:intergenic 25.0%
! CCAAAAACATATATTGCTTA+TGG + chr5.4:78095790-78095809 MS.gene020982:CDS 25.0%
! CTCAAAGCTAAAAATAAAAC+CGG + chr5.4:78094233-78094252 MS.gene020982:CDS 25.0%
! CTGATCAATTCTTTGTAATT+TGG + chr5.4:78096252-78096271 MS.gene020982:intron 25.0%
! GACTATCAAGTAAACAAATT+GGG - chr5.4:78095375-78095394 None:intergenic 25.0%
! GCAAATTTGGATAAATAATC+AGG - chr5.4:78095405-78095424 None:intergenic 25.0%
! GTAATAAAATGTCAACAGAT+TGG - chr5.4:78096947-78096966 None:intergenic 25.0%
! TAAATGGTATGATCATGAAT+GGG - chr5.4:78096816-78096835 None:intergenic 25.0%
! TAATACCAAATTAAGTTCAG+AGG + chr5.4:78093549-78093568 MS.gene020982:CDS 25.0%
! TAGAATAGACTATCAAGTAA+AGG - chr5.4:78095480-78095499 None:intergenic 25.0%
! TATTGCAAAGATTACATGTT+TGG + chr5.4:78093740-78093759 MS.gene020982:intron 25.0%
! TCAATGTAAAAGAAGTGATA+CGG + chr5.4:78093588-78093607 MS.gene020982:CDS 25.0%
! TGACTATCAAGTAAACAAAT+TGG - chr5.4:78095376-78095395 None:intergenic 25.0%
! TGTATATTCTTTATAAGGCA+AGG - chr5.4:78095701-78095720 None:intergenic 25.0%
! TTCAAATATACATGCAACAA+AGG + chr5.4:78096699-78096718 MS.gene020982:intron 25.0%
! TTCAAGGCTAAATTTGAATT+TGG + chr5.4:78097261-78097280 MS.gene020982:intron 25.0%
! TTCTTTGTAATTTGGCTATA+AGG + chr5.4:78096260-78096279 MS.gene020982:intron 25.0%
! TTTAACTCAACAAACAACAA+AGG - chr5.4:78096902-78096921 None:intergenic 25.0%
! TTTCATATATTCTCACATAC+CGG + chr5.4:78097756-78097775 MS.gene020982:intron 25.0%
!! AAAAATGATTGCTGACTATA+AGG - chr5.4:78094152-78094171 None:intergenic 25.0%
!! AACTTCATCGTATTTAGAAT+TGG - chr5.4:78094990-78095009 None:intergenic 25.0%
!! ATGTGTCAAGAATTTCTTTT+TGG + chr5.4:78097877-78097896 MS.gene020982:intron 25.0%
!! CCATAAGCAATATATGTTTT+TGG - chr5.4:78095793-78095812 None:intergenic 25.0%
!! GAATATACAAATCCTTTTAG+TGG + chr5.4:78095712-78095731 MS.gene020982:CDS 25.0%
!! TATCACTTCTTTTACATTGA+TGG - chr5.4:78093588-78093607 None:intergenic 25.0%
!! TCTTTTAAACTCATCAATGT+CGG + chr5.4:78093902-78093921 MS.gene020982:intron 25.0%
!! TGTGTCAAGAATTTCTTTTT+GGG + chr5.4:78097878-78097897 MS.gene020982:intron 25.0%
!! TGTGTTATTGTGTATAACAT+CGG - chr5.4:78094768-78094787 None:intergenic 25.0%
!! TTACTTGATAGTCTATTCTA+TGG + chr5.4:78095480-78095499 MS.gene020982:intron 25.0%
!! TTCTAAATACGATGAAGTTT+TGG + chr5.4:78094991-78095010 MS.gene020982:CDS 25.0%
!!! ATATATTTTTTGTTGGAGCA+AGG + chr5.4:78097111-78097130 MS.gene020982:intron 25.0%
!!! ATTTTATTACATTGACTTGC+AGG + chr5.4:78096957-78096976 MS.gene020982:intron 25.0%
!!! CATAGGATTAGTTTCTTATT+TGG - chr5.4:78097688-78097707 None:intergenic 25.0%
!!! GAAGCGTATATATTTTTTGT+TGG + chr5.4:78097104-78097123 MS.gene020982:intron 25.0%
!!! GAGATTTAAGACATTTTCAA+TGG + chr5.4:78094861-78094880 MS.gene020982:CDS 25.0%
!!! TAACTTGTTTCATATTGTGT+CGG + chr5.4:78093710-78093729 MS.gene020982:intron 25.0%
!!! TAATTTGATTTGTGGTGTTT+TGG + chr5.4:78096140-78096159 MS.gene020982:intron 25.0%
AAAAGTGAGTTTGTGATGTA+TGG - chr5.4:78097348-78097367 None:intergenic 30.0%
AAAGCTAAAAATAAAACCGG+TGG + chr5.4:78094236-78094255 MS.gene020982:CDS 30.0%
AAATGGTATGATCATGAATG+GGG - chr5.4:78096815-78096834 None:intergenic 30.0%
AAGAAATTCTTGACACATGA+TGG - chr5.4:78097875-78097894 None:intergenic 30.0%
AAGATTACATGTTTGGATCT+TGG + chr5.4:78093747-78093766 MS.gene020982:intron 30.0%
AATGTACTTGAATGTACATC+TGG + chr5.4:78094917-78094936 MS.gene020982:CDS 30.0%
AATTAAGCTTCAAGATGTAG+AGG + chr5.4:78094697-78094716 MS.gene020982:CDS 30.0%
ACATCACTCTCATTCAATTT+AGG - chr5.4:78093827-78093846 None:intergenic 30.0%
ACCATGATGACATTCATTAT+CGG - chr5.4:78094600-78094619 None:intergenic 30.0%
ACTATAGGAAATGAAGCATA+AGG + chr5.4:78093998-78094017 MS.gene020982:intron 30.0%
ATAATTAAGAGGTTCATGAC+AGG - chr5.4:78095905-78095924 None:intergenic 30.0%
ATATACATGCAACAAAGGAA+TGG + chr5.4:78096704-78096723 MS.gene020982:intron 30.0%
ATTTCCTATAGTAAACCAGA+TGG - chr5.4:78093990-78094009 None:intergenic 30.0%
CAAATTTGCCTAACATTCTT+GGG + chr5.4:78095416-78095435 MS.gene020982:intron 30.0%
CAATGTAAAAGAAGTGATAC+GGG + chr5.4:78093589-78093608 MS.gene020982:CDS 30.0%
CATCATCAAACACATTACAA+TGG - chr5.4:78095858-78095877 None:intergenic 30.0%
GAAAAACAAGCTATGAATCT+TGG + chr5.4:78093238-78093257 MS.gene020982:CDS 30.0%
GAAAATGTCTTAAATCTCCA+TGG - chr5.4:78094859-78094878 None:intergenic 30.0%
GATACATACTCGATCTTAAT+TGG - chr5.4:78094491-78094510 None:intergenic 30.0%
GTTGAATAACGGTGAAAATT+CGG + chr5.4:78093162-78093181 MS.gene020982:CDS 30.0%
GTTTGCTTTACATACTAACT+CGG - chr5.4:78094663-78094682 None:intergenic 30.0%
TATACACAATAACACAACGA+AGG + chr5.4:78094772-78094791 MS.gene020982:CDS 30.0%
TCAATAACCTACATTACCAA+AGG - chr5.4:78096792-78096811 None:intergenic 30.0%
TCATACCATTTATCTGACTA+TGG + chr5.4:78096824-78096843 MS.gene020982:CDS 30.0%
TCTTAACTCAGAAGAAAGTA+TGG - chr5.4:78096679-78096698 None:intergenic 30.0%
TGAAGAACAAATGATTGAGA+AGG + chr5.4:78094100-78094119 MS.gene020982:CDS 30.0%
TTAATGACAGTAATTTCCTC+AGG - chr5.4:78096324-78096343 None:intergenic 30.0%
TTAGTGTAATTGGCATATGT+TGG + chr5.4:78095215-78095234 MS.gene020982:intron 30.0%
TTCTCTAAGTATATGCTGAA+AGG + chr5.4:78094050-78094069 MS.gene020982:CDS 30.0%
TTCTTGAATGAGATATCCTT+TGG + chr5.4:78096773-78096792 MS.gene020982:intron 30.0%
TTTATGTCACTAGTCAGAAA+AGG - chr5.4:78096190-78096209 None:intergenic 30.0%
TTTGTCTCTCCTGAAAATAT+TGG + chr5.4:78097470-78097489 MS.gene020982:CDS 30.0%
! CTTAACTCAGAAGAAAGTAT+GGG - chr5.4:78096678-78096697 None:intergenic 30.0%
! TATTGTTTAAAGCCTGACAT+GGG + chr5.4:78095766-78095785 MS.gene020982:CDS 30.0%
! TTATTGTTTAAAGCCTGACA+TGG + chr5.4:78095765-78095784 MS.gene020982:CDS 30.0%
!! AGGTGTTGAAATTGAAAGAT+TGG + chr5.4:78095617-78095636 MS.gene020982:CDS 30.0%
!! AGTCTAAATTTTAAGAACGC+TGG - chr5.4:78095143-78095162 None:intergenic 30.0%
!! CACTAAAAAAAATTGGCTTG+AGG - chr5.4:78095201-78095220 None:intergenic 30.0%
!! TCAGGCTTTAAACAATAATC+CGG - chr5.4:78095763-78095782 None:intergenic 30.0%
!! TGCACTTTTTAATACGATAC+TGG - chr5.4:78095984-78096003 None:intergenic 30.0%
!!! TATGAACTGTTTTTTCCTGA+TGG + chr5.4:78097905-78097924 MS.gene020982:intron 30.0%
!!! TTTTTGGTTGTGTCTTGTTA+AGG + chr5.4:78093798-78093817 MS.gene020982:intron 30.0%
AATAAAGGAAGAAAGAGACG+TGG + chr5.4:78093417-78093436 MS.gene020982:CDS 35.0%
AATATCCACCAATTCTTCAC+TGG + chr5.4:78095556-78095575 MS.gene020982:CDS 35.0%
ACAGATTTCTATACTGTCCT+AGG + chr5.4:78094819-78094838 MS.gene020982:CDS 35.0%
AGAAATTCAGAAGAGGAAGA+TGG + chr5.4:78093369-78093388 MS.gene020982:CDS 35.0%
AGAGGATGTAACCAAATTGA+AGG + chr5.4:78096500-78096519 MS.gene020982:CDS 35.0%
AGCTTCTGAATAAAAGTCCA+AGG - chr5.4:78096990-78097009 None:intergenic 35.0%
AGGCTGTTAATTGCATAGAT+TGG + chr5.4:78095020-78095039 MS.gene020982:CDS 35.0%
AGTACATTGCTGACAATTAC+AGG - chr5.4:78094905-78094924 None:intergenic 35.0%
ATAAGGAATACCTTGTCTCT+TGG - chr5.4:78094135-78094154 None:intergenic 35.0%
ATATATTCTCACATACCGGA+GGG + chr5.4:78097760-78097779 MS.gene020982:intron 35.0%
ATGAAACTTAAGGAGGAGTA+TGG + chr5.4:78096855-78096874 MS.gene020982:CDS 35.0%
ATGCTCCATAGTCAGATAAA+TGG - chr5.4:78096832-78096851 None:intergenic 35.0%
ATGGTTTCCTTGAAATGAGA+AGG + chr5.4:78094615-78094634 MS.gene020982:CDS 35.0%
ATTGAATAACGGTGAAGGTT+CGG + chr5.4:78093045-78093064 MS.gene020982:CDS 35.0%
CAGATTTCTATACTGTCCTA+GGG + chr5.4:78094820-78094839 MS.gene020982:CDS 35.0%
CCAAATTTGCCTAACATTCT+TGG + chr5.4:78095415-78095434 MS.gene020982:intron 35.0%
CCAAGAATGTTAGGCAAATT+TGG - chr5.4:78095418-78095437 None:intergenic 35.0%
CCTGTTTGAACAAATGGTAA+GGG + chr5.4:78093659-78093678 MS.gene020982:intron 35.0%
CCTTACCATTTGTTCAAACA+GGG - chr5.4:78093661-78093680 None:intergenic 35.0%
CCTTCGACATAAAATCGAAA+AGG - chr5.4:78098072-78098091 None:intergenic 35.0%
CGAGAAAAACAAGCTATGAA+TGG + chr5.4:78093118-78093137 MS.gene020982:CDS 35.0%
CGTTCCTGAAATAAATCAGA+AGG - chr5.4:78095646-78095665 None:intergenic 35.0%
CTGTTTGAACAAATGGTAAG+GGG + chr5.4:78093660-78093679 MS.gene020982:intron 35.0%
GAAAAACAAGCTATGAATGG+TGG + chr5.4:78093121-78093140 MS.gene020982:CDS 35.0%
GACTTCTTCCACATTTAAGA+CGG + chr5.4:78094072-78094091 MS.gene020982:CDS 35.0%
GATATTCGGATGTGAATTAC+AGG + chr5.4:78094201-78094220 MS.gene020982:intron 35.0%
GCATAAGATGAAACTTAAGG+AGG + chr5.4:78096848-78096867 MS.gene020982:CDS 35.0%
GGAGCATAAGATGAAACTTA+AGG + chr5.4:78096845-78096864 MS.gene020982:CDS 35.0%
GGATTCCTCTGAACTTAATT+TGG - chr5.4:78093557-78093576 None:intergenic 35.0%
GGTCTAAATTTCTTGATGTC+TGG + chr5.4:78095346-78095365 MS.gene020982:intron 35.0%
GTTGTTAGTGAGCAGAATAA+AGG + chr5.4:78093402-78093421 MS.gene020982:CDS 35.0%
TAATTGCATAGATTGGTGTG+AGG + chr5.4:78095027-78095046 MS.gene020982:CDS 35.0%
TAGAGGAGACTTGTGATAAT+AGG + chr5.4:78094714-78094733 MS.gene020982:CDS 35.0%
TCCTGAAATAAATCAGAAGG+AGG - chr5.4:78095643-78095662 None:intergenic 35.0%
TCTTTCAATTTCAACACCTC+AGG - chr5.4:78095616-78095635 None:intergenic 35.0%
TGGCTATAAGGTAAATGTGT+TGG + chr5.4:78096272-78096291 MS.gene020982:intron 35.0%
TTAAGTTTCTTGTGGACTTG+TGG - chr5.4:78093532-78093551 None:intergenic 35.0%
TTACCTTCAGATTTCTGACT+TGG - chr5.4:78097049-78097068 None:intergenic 35.0%
TTCATGACAGGAAAGAGAAA+AGG - chr5.4:78095893-78095912 None:intergenic 35.0%
TTGTGTAACCAGTGAAGAAT+TGG - chr5.4:78095567-78095586 None:intergenic 35.0%
TTTGTTGGAGCAAGGAAAAA+CGG + chr5.4:78097119-78097138 MS.gene020982:intron 35.0%
! AAGCACTCACCAATATTTTC+AGG - chr5.4:78097482-78097501 None:intergenic 35.0%
! AATGTACATCTGGTTTAAGC+TGG + chr5.4:78094927-78094946 MS.gene020982:CDS 35.0%
! AATTCTTCACTGGTTACACA+AGG + chr5.4:78095566-78095585 MS.gene020982:CDS 35.0%
! ATGTACATCTGGTTTAAGCT+GGG + chr5.4:78094928-78094947 MS.gene020982:CDS 35.0%
! ATTCTTCACTGGTTACACAA+GGG + chr5.4:78095567-78095586 MS.gene020982:CDS 35.0%
! ATTGTTTAAAGCCTGACATG+GGG + chr5.4:78095767-78095786 MS.gene020982:CDS 35.0%
! CCTTTTCGATTTTATGTCGA+AGG + chr5.4:78098069-78098088 MS.gene020982:intron 35.0%
! GAAGTATCCTTCTCATTTCA+AGG - chr5.4:78094625-78094644 None:intergenic 35.0%
! GAATCCATCTGGTTTACTAT+AGG + chr5.4:78093983-78094002 MS.gene020982:intron 35.0%
! GTATGACAATTTTCTTCACC+TGG - chr5.4:78097944-78097963 None:intergenic 35.0%
! GTTTTGCAGAAATTCAGAAG+AGG + chr5.4:78093362-78093381 MS.gene020982:CDS 35.0%
! TAAGACATTTTCAATGGCAC+TGG + chr5.4:78094867-78094886 MS.gene020982:CDS 35.0%
! TATGGATTTGCTCATGATCT+TGG + chr5.4:78095808-78095827 MS.gene020982:CDS 35.0%
! TGACACTAATGATAGTGACT+TGG + chr5.4:78096428-78096447 MS.gene020982:CDS 35.0%
! TGGACTTTTATTCAGAAGCT+TGG + chr5.4:78096990-78097009 MS.gene020982:CDS 35.0%
! TTGTTTCATATTGTGTCGGT+TGG + chr5.4:78093714-78093733 MS.gene020982:intron 35.0%
!! AAATTGCAGTCCTTTAAAGC+AGG + chr5.4:78096560-78096579 MS.gene020982:CDS 35.0%
!! GAGATATCCTTTGGTAATGT+AGG + chr5.4:78096782-78096801 MS.gene020982:intron 35.0%
!! GCTGATTTTACCTGCTTTAA+AGG - chr5.4:78096573-78096592 None:intergenic 35.0%
!! TATGAATCTTGGTGCCAATA+CGG + chr5.4:78093249-78093268 MS.gene020982:CDS 35.0%
!! TCATCTTTAGAATGATCCAC+CGG - chr5.4:78094255-78094274 None:intergenic 35.0%
!!! ATAGCTTGTTTTTCTCGATC+AGG - chr5.4:78093115-78093134 None:intergenic 35.0%
!!! TGACATTCATTATCGGCTTT+TGG - chr5.4:78094593-78094612 None:intergenic 35.0%
!!! TTTTTAGCTTTGAGAGTGAG+AGG - chr5.4:78094227-78094246 None:intergenic 35.0%
!!! TTTTTTGCAGTCATGCATCA+AGG + chr5.4:78097436-78097455 MS.gene020982:intron 35.0%
AAAAGGGAGCTAGTTGGTTA+TGG + chr5.4:78096375-78096394 MS.gene020982:CDS 40.0%
AAAGGGAGCTAGTTGGTTAT+GGG + chr5.4:78096376-78096395 MS.gene020982:CDS 40.0%
AACAGATTCTTCTGCTACTG+CGG - chr5.4:78093209-78093228 None:intergenic 40.0%
ACAAAGTGAAACAGCAGCTA+AGG - chr5.4:78093689-78093708 None:intergenic 40.0%
ACAATTCGCCCAAGAATGTT+AGG - chr5.4:78095427-78095446 None:intergenic 40.0%
ACACTCCCTACTTTGAATGT+TGG + chr5.4:78093004-78093023 MS.gene020982:CDS 40.0%
ACTAACTCGGAGATGCAATT+CGG - chr5.4:78094650-78094669 None:intergenic 40.0%
AGCACCTTGAGCAAGATAAA+AGG + chr5.4:78096358-78096377 MS.gene020982:CDS 40.0%
AGGCTCTTCATCATTTCAAC+CGG + chr5.4:78093447-78093466 MS.gene020982:CDS 40.0%
AGGTTGAGAGAACCACTAAA+AGG - chr5.4:78095727-78095746 None:intergenic 40.0%
AGTGTTTCATCGTCAGGAAT+GGG - chr5.4:78092989-78093008 None:intergenic 40.0%
ATAACATCGGCGTTACTAAC+AGG - chr5.4:78094755-78094774 None:intergenic 40.0%
ATCTGTGATTTATCGGAAGC+CGG - chr5.4:78097526-78097545 None:intergenic 40.0%
ATTTGGTTACATCCTCTCTC+CGG - chr5.4:78096497-78096516 None:intergenic 40.0%
CAAAGTGAAACAGCAGCTAA+GGG - chr5.4:78093688-78093707 None:intergenic 40.0%
CAAGATAAAAGGGAGCTAGT+TGG + chr5.4:78096369-78096388 MS.gene020982:CDS 40.0%
CATATATTCTCACATACCGG+AGG + chr5.4:78097759-78097778 MS.gene020982:intron 40.0%
CCCTGTTTGAACAAATGGTA+AGG + chr5.4:78093658-78093677 MS.gene020982:intron 40.0%
CCCTTACCATTTGTTCAAAC+AGG - chr5.4:78093662-78093681 None:intergenic 40.0%
GAAACGGCGTCATTGAATAA+CGG + chr5.4:78093034-78093053 MS.gene020982:CDS 40.0%
GAAACTGCGTCGTTGAATAA+CGG + chr5.4:78093151-78093170 MS.gene020982:CDS 40.0%
GACACATGATGGCATAAAAC+AGG - chr5.4:78097864-78097883 None:intergenic 40.0%
GCACCTTGAGCAAGATAAAA+GGG + chr5.4:78096359-78096378 MS.gene020982:CDS 40.0%
GCATACCCTGTTTGAACAAA+TGG + chr5.4:78093653-78093672 MS.gene020982:CDS 40.0%
GCCGATAATGAATGTCATCA+TGG + chr5.4:78094596-78094615 MS.gene020982:CDS 40.0%
GCCTCCTTCTGATTTATTTC+AGG + chr5.4:78095639-78095658 MS.gene020982:CDS 40.0%
GCGATCACACGATACTAATT+AGG - chr5.4:78097293-78097312 None:intergenic 40.0%
GCTATGGAGATAATGAAACG+CGG + chr5.4:78093331-78093350 MS.gene020982:CDS 40.0%
GGAAGATGAAATGGTAGCTA+GGG + chr5.4:78093288-78093307 MS.gene020982:CDS 40.0%
TAAAAGAAGTGATACGGGCA+GGG + chr5.4:78093594-78093613 MS.gene020982:CDS 40.0%
TAAAGTGGAACTGAAACCTG+AGG + chr5.4:78096305-78096324 MS.gene020982:CDS 40.0%
TCACCAAGTCAGAAATCTGA+AGG + chr5.4:78097043-78097062 MS.gene020982:CDS 40.0%
TCATCCAACCGTCTTAAATG+TGG - chr5.4:78094083-78094102 None:intergenic 40.0%
TGATCTGGTAAGGACTGATT+TGG + chr5.4:78094280-78094299 MS.gene020982:intron 40.0%
TGTAACCAGTGAAGAATTGG+TGG - chr5.4:78095564-78095583 None:intergenic 40.0%
TTACAGGTCTGAGAAAACCA+AGG + chr5.4:78098173-78098192 MS.gene020982:intron 40.0%
TTCCTCAGTTAAAGCTGCTA+TGG + chr5.4:78093315-78093334 MS.gene020982:CDS 40.0%
TTGAAATGATGAAGAGCCTC+CGG - chr5.4:78093446-78093465 None:intergenic 40.0%
TTGCAATTATCACAGCACAC+AGG - chr5.4:78093863-78093882 None:intergenic 40.0%
! CACTAATGATAGTGACTTGG+TGG + chr5.4:78096431-78096450 MS.gene020982:CDS 40.0%
! GACTTGTGGAACCTCATTTT+GGG - chr5.4:78093518-78093537 None:intergenic 40.0%
! TCTTCCACATTTAAGACGGT+TGG + chr5.4:78094076-78094095 MS.gene020982:CDS 40.0%
! TTCTTCACTGGTTACACAAG+GGG + chr5.4:78095568-78095587 MS.gene020982:CDS 40.0%
! TTGGCGGATCTGTGATTTAT+CGG - chr5.4:78097533-78097552 None:intergenic 40.0%
! TTTACATTGATGGCACGCTA+AGG - chr5.4:78093578-78093597 None:intergenic 40.0%
!! AAATTGGCTTGAGGTTCACA+CGG - chr5.4:78095192-78095211 None:intergenic 40.0%
!! AATGATAGTGACTTGGTGGT+TGG + chr5.4:78096435-78096454 MS.gene020982:CDS 40.0%
!! CGGTTTTGTAGAGTTCAGTT+AGG - chr5.4:78095169-78095188 None:intergenic 40.0%
!! GTGCTATCTGGGATATTTTC+CGG + chr5.4:78096475-78096494 MS.gene020982:CDS 40.0%
!! TTCAGATTTCTGACTTGGTG+AGG - chr5.4:78097044-78097063 None:intergenic 40.0%
!!! CGATGAAGTTTTGGATGTGA+AGG + chr5.4:78095000-78095019 MS.gene020982:CDS 40.0%
!!! TCATTATCGGCTTTTGGACA+GGG - chr5.4:78094587-78094606 None:intergenic 40.0%
!!! TTCATTATCGGCTTTTGGAC+AGG - chr5.4:78094588-78094607 None:intergenic 40.0%
AACCCTCCAAAAGGTCATGA+GGG - chr5.4:78096631-78096650 None:intergenic 45.0%
AAGGGAGCTAGTTGGTTATG+GGG + chr5.4:78096377-78096396 MS.gene020982:CDS 45.0%
AATCGTGAGTGGTCAAGATC+TGG + chr5.4:78094533-78094552 MS.gene020982:CDS 45.0%
ACAGACCTCAAACTTGTCCT+TGG - chr5.4:78097552-78097571 None:intergenic 45.0%
AGAGGAGACAAAGGTCAAAG+CGG - chr5.4:78094424-78094443 None:intergenic 45.0%
ATCCCAGATAGCACCTTCTA+AGG - chr5.4:78096469-78096488 None:intergenic 45.0%
ATCGTGAGTGGTCAAGATCT+GGG + chr5.4:78094534-78094553 MS.gene020982:CDS 45.0%
ATGCAACAAAGGAATGGCGA+AGG + chr5.4:78096710-78096729 MS.gene020982:intron 45.0%
ATTCAATGACGCCGTTTCAG+CGG - chr5.4:78093032-78093051 None:intergenic 45.0%
CGAGTATGTATCACAGACTG+AGG + chr5.4:78094499-78094518 MS.gene020982:CDS 45.0%
CGGAAGATGAAATGGTAGCT+AGG + chr5.4:78093287-78093306 MS.gene020982:CDS 45.0%
CTAAAGATGAGCGTGTGATC+TGG + chr5.4:78094265-78094284 MS.gene020982:CDS 45.0%
CTCGACTTCCTCATCATTGT+TGG - chr5.4:78094030-78094049 None:intergenic 45.0%
GAAAGAGAAGCCAAGAGACA+AGG + chr5.4:78094122-78094141 MS.gene020982:CDS 45.0%
GAAGGAATCCACCCAAAATG+AGG + chr5.4:78093504-78093523 MS.gene020982:CDS 45.0%
GACTTGCAGGAATTGAACCT+TGG + chr5.4:78096970-78096989 MS.gene020982:intron 45.0%
GAGAAAGAGAAAAGCGGAGA+AGG + chr5.4:78093486-78093505 MS.gene020982:CDS 45.0%
GAGTGTTTCATCGTCAGGAA+TGG - chr5.4:78092990-78093009 None:intergenic 45.0%
GATAAATCACAGATCCGCCA+AGG + chr5.4:78097532-78097551 MS.gene020982:CDS 45.0%
GCGTCATTGAATAACGGTGA+AGG + chr5.4:78093040-78093059 MS.gene020982:CDS 45.0%
GCTGTTGACGGAAGATGAAA+TGG + chr5.4:78093279-78093298 MS.gene020982:CDS 45.0%
GGTCGAAACCAACAATGATG+AGG + chr5.4:78094019-78094038 MS.gene020982:CDS 45.0%
GGTGAAAATTCGGTTGAAGC+TGG + chr5.4:78093172-78093191 MS.gene020982:CDS 45.0%
GTAAAAGAAGTGATACGGGC+AGG + chr5.4:78093593-78093612 MS.gene020982:CDS 45.0%
TCCCAGATAGCACCTTCTAA+GGG - chr5.4:78096468-78096487 None:intergenic 45.0%
TTGCTCATGATCTTGGACGT+GGG + chr5.4:78095815-78095834 MS.gene020982:CDS 45.0%
TTTGCTCATGATCTTGGACG+TGG + chr5.4:78095814-78095833 MS.gene020982:CDS 45.0%
! AATGCACGCCACATGACTTT+TGG - chr5.4:78094956-78094975 None:intergenic 45.0%
! ATGAACTCAGCATGATGACG+AGG - chr5.4:78095673-78095692 None:intergenic 45.0%
! CTCCATAGCAGCTTTAACTG+AGG - chr5.4:78093320-78093339 None:intergenic 45.0%
! GCTCCCTTTTATCTTGCTCA+AGG - chr5.4:78096365-78096384 None:intergenic 45.0%
! GGACTTGTGGAACCTCATTT+TGG - chr5.4:78093519-78093538 None:intergenic 45.0%
! GGCATTTTGTACAGCTTCTG+TGG - chr5.4:78094403-78094422 None:intergenic 45.0%
! TTCAATGGCACTGGAGCAAA+GGG + chr5.4:78094876-78094895 MS.gene020982:CDS 45.0%
! TTGTGGAACCTCATTTTGGG+TGG - chr5.4:78093515-78093534 None:intergenic 45.0%
! TTTCAATGGCACTGGAGCAA+AGG + chr5.4:78094875-78094894 MS.gene020982:CDS 45.0%
! TTTTCCTGATGGCTGCTTCT+TGG + chr5.4:78097916-78097935 MS.gene020982:intron 45.0%
!! ATAGTGACTTGGTGGTTGGA+GGG + chr5.4:78096439-78096458 MS.gene020982:CDS 45.0%
!!! TATGTTTTTGGCCCCATGTC+AGG - chr5.4:78095781-78095800 None:intergenic 45.0%
AACCGGAGAGAAAGAAACGC+GGG + chr5.4:78093464-78093483 MS.gene020982:CDS 50.0%
AACTCGGAGATGCAATTCGG+AGG - chr5.4:78094647-78094666 None:intergenic 50.0%
AATCCGGCAACTTCACAGCA+AGG - chr5.4:78095747-78095766 None:intergenic 50.0%
ACAGCACACAGGACATGCTT+CGG - chr5.4:78093852-78093871 None:intergenic 50.0%
ACCCTCCAAAAGGTCATGAG+GGG - chr5.4:78096630-78096649 None:intergenic 50.0%
ACGAGTCTACGAATCGTGAG+TGG + chr5.4:78094522-78094541 MS.gene020982:CDS 50.0%
ACGCGGGAGAAAGAGAAAAG+CGG + chr5.4:78093480-78093499 MS.gene020982:CDS 50.0%
AGATCTGGGTGGCATGCAAA+TGG + chr5.4:78094548-78094567 MS.gene020982:CDS 50.0%
AGCAGACTCTTCTGTTGCTG+CGG - chr5.4:78093092-78093111 None:intergenic 50.0%
AGGGCTGTAGATCTACACCA+TGG + chr5.4:78094839-78094858 MS.gene020982:CDS 50.0%
ATCCGCCAAGGACAAGTTTG+AGG + chr5.4:78097544-78097563 MS.gene020982:CDS 50.0%
CAACCCTCCAAAAGGTCATG+AGG - chr5.4:78096632-78096651 None:intergenic 50.0%
CAACCGGAGAGAAAGAAACG+CGG + chr5.4:78093463-78093482 MS.gene020982:CDS 50.0%
CCCAGATAGCACCTTCTAAG+GGG - chr5.4:78096467-78096486 None:intergenic 50.0%
CGCAACAACAGAGGAGACAA+AGG - chr5.4:78094433-78094452 None:intergenic 50.0%
CGGCGCCAACATTCAAAGTA+GGG - chr5.4:78093012-78093031 None:intergenic 50.0%
GAAGAAAGAGACGTGGTAGC+CGG + chr5.4:78093424-78093443 MS.gene020982:CDS 50.0%
GACCTCAAACTTGTCCTTGG+CGG - chr5.4:78097549-78097568 None:intergenic 50.0%
GATGAGCGTGTGATCTGGTA+AGG + chr5.4:78094270-78094289 MS.gene020982:intron 50.0%
GCTGGGAACCAAAAGTCATG+TGG + chr5.4:78094945-78094964 MS.gene020982:CDS 50.0%
GGAGGGCAAGTCTTGCATAA+CGG + chr5.4:78097777-78097796 MS.gene020982:intron 50.0%
GTTATGCAAGACTTGCCCTC+CGG - chr5.4:78097778-78097797 None:intergenic 50.0%
GTTGGCGCATATCGCTAAAG+TGG + chr5.4:78096290-78096309 MS.gene020982:CDS 50.0%
GTTTGACAGAGGAATTCCGC+CGG + chr5.4:78097504-78097523 MS.gene020982:CDS 50.0%
TCAACGACGCAGTTTCAGCA+GGG - chr5.4:78093147-78093166 None:intergenic 50.0%
TCCTAGTGCAACCCTCCAAA+AGG - chr5.4:78096640-78096659 None:intergenic 50.0%
TGAGTGCTTGCGTTTGACAG+AGG + chr5.4:78097493-78097512 MS.gene020982:CDS 50.0%
TGCTCATGATCTTGGACGTG+GGG + chr5.4:78095816-78095835 MS.gene020982:CDS 50.0%
TGGTGTAGATCTACAGCCCT+AGG - chr5.4:78094839-78094858 None:intergenic 50.0%
TGTGATTTATCGGAAGCCGG+CGG - chr5.4:78097523-78097542 None:intergenic 50.0%
TTCAACGACGCAGTTTCAGC+AGG - chr5.4:78093148-78093167 None:intergenic 50.0%
! CAACCTTGCTGTGAAGTTGC+CGG + chr5.4:78095741-78095760 MS.gene020982:CDS 50.0%
! CGTCAGGAATGGGTTCTTCT+GGG - chr5.4:78092979-78092998 None:intergenic 50.0%
! CTGGGATATTTTCCGGAGAG+AGG + chr5.4:78096482-78096501 MS.gene020982:CDS 50.0%
! GAATGGGTTCTTCTGGGTCT+GGG - chr5.4:78092973-78092992 None:intergenic 50.0%
! GGATTCCCCTCATGACCTTT+TGG + chr5.4:78096622-78096641 MS.gene020982:intron 50.0%
! TCAATGGCACTGGAGCAAAG+GGG + chr5.4:78094877-78094896 MS.gene020982:CDS 50.0%
! TCCCCTCATGACCTTTTGGA+GGG + chr5.4:78096626-78096645 MS.gene020982:intron 50.0%
! TCGTCAGGAATGGGTTCTTC+TGG - chr5.4:78092980-78092999 None:intergenic 50.0%
! TTCCCCTCATGACCTTTTGG+AGG + chr5.4:78096625-78096644 MS.gene020982:intron 50.0%
! TTCGGTTGAAGCTGGTGATG+TGG + chr5.4:78093063-78093082 MS.gene020982:CDS 50.0%
!! ACCCCTTAGAAGGTGCTATC+TGG + chr5.4:78096463-78096482 MS.gene020982:CDS 50.0%
!! ACCTTTTGGAGGGTTGCACT+AGG + chr5.4:78096636-78096655 MS.gene020982:intron 50.0%
!! CCCCTTAGAAGGTGCTATCT+GGG + chr5.4:78096464-78096483 MS.gene020982:CDS 50.0%
!! GAATCTTGGTGCCAATACGG+TGG + chr5.4:78093252-78093271 MS.gene020982:CDS 50.0%
!! GATAGTGACTTGGTGGTTGG+AGG + chr5.4:78096438-78096457 MS.gene020982:CDS 50.0%
!! GTAGGGAGTGTTTCATCGTC+AGG - chr5.4:78092995-78093014 None:intergenic 50.0%
!! TAGTGACTTGGTGGTTGGAG+GGG + chr5.4:78096440-78096459 MS.gene020982:CDS 50.0%
!!! GATGCTGTTTTCATTCCCGC+TGG + chr5.4:78097014-78097033 MS.gene020982:CDS 50.0%
ACACAAGGGGTCGCAAGGAT+TGG + chr5.4:78095581-78095600 MS.gene020982:CDS 55.0%
CAACAGCGACTCCACCGTAT+TGG - chr5.4:78093266-78093285 None:intergenic 55.0%
CACCTAGAAGCTTCCCACCA+CGG - chr5.4:78094460-78094479 None:intergenic 55.0%
CTCCCGCGTTTCTTTCTCTC+CGG - chr5.4:78093469-78093488 None:intergenic 55.0%
GAATGTTGGCGCCGCTGAAA+CGG + chr5.4:78093018-78093037 MS.gene020982:CDS 55.0%
GATGGCTGCTTCTTGGTACC+AGG + chr5.4:78097923-78097942 MS.gene020982:intron 55.0%
GCGGCGCCAACATTCAAAGT+AGG - chr5.4:78093013-78093032 None:intergenic 55.0%
GCTAGTTGGTTATGGGGAGG+CGG + chr5.4:78096383-78096402 MS.gene020982:CDS 55.0%
GGAGCTAGTTGGTTATGGGG+AGG + chr5.4:78096380-78096399 MS.gene020982:CDS 55.0%
GGTACCAAGAAGCAGCCATC+AGG - chr5.4:78097923-78097942 None:intergenic 55.0%
GTGAGTGGTCAAGATCTGGG+TGG + chr5.4:78094537-78094556 MS.gene020982:CDS 55.0%
TACGGTGGAGTCGCTGTTGA+CGG + chr5.4:78093267-78093286 MS.gene020982:CDS 55.0%
TGGTTACACAAGGGGTCGCA+AGG + chr5.4:78095576-78095595 MS.gene020982:CDS 55.0%
! GGAATGGGTTCTTCTGGGTC+TGG - chr5.4:78092974-78092993 None:intergenic 55.0%
! GGTGAAGGTTCGGTTGAAGC+TGG + chr5.4:78093055-78093074 MS.gene020982:CDS 55.0%
! GTCGCAAGGATTGGCGCAAT+TGG + chr5.4:78095590-78095609 MS.gene020982:CDS 55.0%
! TTGGCTTGAGGTTCACACGG+CGG - chr5.4:78095189-78095208 None:intergenic 55.0%
CACGGAGCTCGCAACAACAG+AGG - chr5.4:78094442-78094461 None:intergenic 60.0%
CTCTGTTGTTGCGAGCTCCG+TGG + chr5.4:78094440-78094459 MS.gene020982:CDS 60.0%
GAAAGAGACGTGGTAGCCGG+AGG + chr5.4:78093427-78093446 MS.gene020982:CDS 60.0%
GGGTGGCATGCAAATGGCGA+TGG + chr5.4:78094554-78094573 MS.gene020982:CDS 60.0%
GTTGGAGGGGACCCCTTAGA+AGG + chr5.4:78096453-78096472 MS.gene020982:CDS 60.0%
GTTGTTGCGAGCTCCGTGGT+GGG + chr5.4:78094444-78094463 MS.gene020982:CDS 60.0%
TGTTGTTGCGAGCTCCGTGG+TGG + chr5.4:78094443-78094462 MS.gene020982:CDS 60.0%
! ACTTGGTGAGGCAAGCCAGC+GGG - chr5.4:78097032-78097051 None:intergenic 60.0%
! CGTGGTGGGAAGCTTCTAGG+TGG + chr5.4:78094458-78094477 MS.gene020982:CDS 60.0%
! CTCCGTGGTGGGAAGCTTCT+AGG + chr5.4:78094455-78094474 MS.gene020982:CDS 60.0%
! GGATTGGCGCAATTGGCCTG+AGG + chr5.4:78095597-78095616 MS.gene020982:CDS 60.0%
!! GACTTGGTGAGGCAAGCCAG+CGG - chr5.4:78097033-78097052 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 78092905 78098206 78092905 ID=MS.gene020982
chr5.4 mRNA 78092905 78098206 78092905 ID=MS.gene020982.t1;Parent=MS.gene020982
chr5.4 exon 78092905 78093674 78092905 ID=MS.gene020982.t1.exon1;Parent=MS.gene020982.t1
chr5.4 CDS 78092905 78093674 78092905 ID=cds.MS.gene020982.t1;Parent=MS.gene020982.t1
chr5.4 exon 78093820 78093919 78093820 ID=MS.gene020982.t1.exon2;Parent=MS.gene020982.t1
chr5.4 CDS 78093820 78093919 78093820 ID=cds.MS.gene020982.t1;Parent=MS.gene020982.t1
chr5.4 exon 78094005 78094143 78094005 ID=MS.gene020982.t1.exon3;Parent=MS.gene020982.t1
chr5.4 CDS 78094005 78094143 78094005 ID=cds.MS.gene020982.t1;Parent=MS.gene020982.t1
chr5.4 exon 78094223 78094286 78094223 ID=MS.gene020982.t1.exon4;Parent=MS.gene020982.t1
chr5.4 CDS 78094223 78094286 78094223 ID=cds.MS.gene020982.t1;Parent=MS.gene020982.t1
chr5.4 exon 78094370 78095048 78094370 ID=MS.gene020982.t1.exon5;Parent=MS.gene020982.t1
chr5.4 CDS 78094370 78095048 78094370 ID=cds.MS.gene020982.t1;Parent=MS.gene020982.t1
chr5.4 exon 78095547 78095876 78095547 ID=MS.gene020982.t1.exon6;Parent=MS.gene020982.t1
chr5.4 CDS 78095547 78095876 78095547 ID=cds.MS.gene020982.t1;Parent=MS.gene020982.t1
chr5.4 exon 78096282 78096581 78096282 ID=MS.gene020982.t1.exon7;Parent=MS.gene020982.t1
chr5.4 CDS 78096282 78096581 78096282 ID=cds.MS.gene020982.t1;Parent=MS.gene020982.t1
chr5.4 exon 78096804 78096876 78096804 ID=MS.gene020982.t1.exon8;Parent=MS.gene020982.t1
chr5.4 CDS 78096804 78096876 78096804 ID=cds.MS.gene020982.t1;Parent=MS.gene020982.t1
chr5.4 exon 78096979 78097064 78096979 ID=MS.gene020982.t1.exon9;Parent=MS.gene020982.t1
chr5.4 CDS 78096979 78097064 78096979 ID=cds.MS.gene020982.t1;Parent=MS.gene020982.t1
chr5.4 exon 78097446 78097565 78097446 ID=MS.gene020982.t1.exon10;Parent=MS.gene020982.t1
chr5.4 CDS 78097446 78097565 78097446 ID=cds.MS.gene020982.t1;Parent=MS.gene020982.t1
chr5.4 exon 78097945 78098003 78097945 ID=MS.gene020982.t1.exon11;Parent=MS.gene020982.t1
chr5.4 CDS 78097945 78098003 78097945 ID=cds.MS.gene020982.t1;Parent=MS.gene020982.t1
chr5.4 exon 78098179 78098206 78098179 ID=MS.gene020982.t1.exon12;Parent=MS.gene020982.t1
chr5.4 CDS 78098179 78098206 78098179 ID=cds.MS.gene020982.t1;Parent=MS.gene020982.t1
Gene Sequence

>MS.gene020982

ATGGCGGAGGAAGAGAACAACGAAATTGTCACTTATAGAGTGAAAATCAAAGTCACACTCACTGTCCCAGACCCAGAAGAACCCATTCCTGACGATGAAACACTCCCTACTTTGAATGTTGGCGCCGCTGAAACGGCGTCATTGAATAACGGTGAAGGTTCGGTTGAAGCTGGTGATGTGGCAGCCGCAGCAACAGAAGAGTCTGCTCCTGATCGAGAAAAACAAGCTATGAATGGTGGCCCTGCTGAAACTGCGTCGTTGAATAACGGTGAAAATTCGGTTGAAGCTGGTGATGTGGCAGCCGCAGTAGCAGAAGAATCTGTTCCTGATCGAGAAAAACAAGCTATGAATCTTGGTGCCAATACGGTGGAGTCGCTGTTGACGGAAGATGAAATGGTAGCTAGGGATTCTTCCTCAGTTAAAGCTGCTATGGAGATAATGAAACGCGGAAGAAAGAGTTTTGCAGAAATTCAGAAGAGGAAGATGGATGAAGAAGCGTTGTTAGTGAGCAGAATAAAGGAAGAAAGAGACGTGGTAGCCGGAGGCTCTTCATCATTTCAACCGGAGAGAAAGAAACGCGGGAGAAAGAGAAAAGCGGAGAAGGAATCCACCCAAAATGAGGTTCCACAAGTCCACAAGAAACTTAATACCAAATTAAGTTCAGAGGAATCCTTAGCGTGCCATCAATGTAAAAGAAGTGATACGGGCAGGGTTATAAGATGCACAAAATGCAAACGAAGAAGATATTGCATACCCTGTTTGAACAAATGGTAAGGGGAACCCTTAGCTGCTGTTTCACTTTGTTTAACTTGTTTCATATTGTGTCGGTTGGTTCTATTGCAAAGATTACATGTTTGGATCTTGGTTGATGAAATATTGATATTAACTATGTTTTTTTGGTTGTGTCTTGTTAAGGTATCCTAAATTGAATGAGAGTGATGTTGCCGAAGCATGTCCTGTGTGCTGTGATAATTGCAATTGTAAAGCATGCTTGCGATCTTTTAAACTCATCAATGTCGGTGATCGTCTCTTCTAGATTAACTATTTTTCTCTTTTTTCTGTATTGTATAATTGAAATGAATCCATCTGGTTTACTATAGGAAATGAAGCATAAGGTCGAAACCAACAATGATGAGGAAGTCGAGTTCTCTAAGTATATGCTGAAAGGACTTCTTCCACATTTAAGACGGTTGGATGAAGAACAAATGATTGAGAAGGAAAGAGAAGCCAAGAGACAAGGTATTCCTTATAGTCAGCAATCATTTTTAGTTTCATATATTTTTCATTTTAAAATTTGATATTCGGATGTGAATTACAGGCCTCTCACTCTCAAAGCTAAAAATAAAACCGGTGGATCATTCTAAAGATGAGCGTGTGATCTGGTAAGGACTGATTTGGTATATTAATCAATGTTTTCTTTATTTAATCTAATGCATTATAGTTGCTGATTTCACACTTTTTGTAGTGACAACTGCAAAACATCAATATTTGACTACCACAGAAGCTGTACAAAATGCCGCTTTGACCTTTGTCTCCTCTGTTGTTGCGAGCTCCGTGGTGGGAAGCTTCTAGGTGGCGCAGATCCAATTAAGATCGAGTATGTATCACAGACTGAGGACGAGTCTACGAATCGTGAGTGGTCAAGATCTGGGTGGCATGCAAATGGCGATGGTAGCATTCCCTGTCCAAAAGCCGATAATGAATGTCATCATGGTTTCCTTGAAATGAGAAGGATACTTCCTCCGAATTGCATCTCCGAGTTAGTATGTAAAGCAAACGAACTTGCAGAAACAATTAAGCTTCAAGATGTAGAGGAGACTTGTGATAATAGGTGTTCTTGCTTGAAACCTGTTAGTAACGCCGATGTTATACACAATAACACAACGAAGGCAGCTTTTCTTGAAAATTCAAGTGACAGATTTCTATACTGTCCTAGGGCTGTAGATCTACACCATGGAGATTTAAGACATTTTCAATGGCACTGGAGCAAAGGGGAGCCTGTAATTGTCAGCAATGTACTTGAATGTACATCTGGTTTAAGCTGGGAACCAAAAGTCATGTGGCGTGCATTCCGTCAAAAAACCAATTCTAAATACGATGAAGTTTTGGATGTGAAGGCTGTTAATTGCATAGATTGGTGTGAGGTTTGTTTGATTTCTAAATTTATGATGAAGGGGTTCTTAATTGAATTCTTGTTTATTATCTTTGTGTGAAACTTGTTTCTAATTTATTTAACCAGCGTTCTTAAAATTTAGACTGTACCTAACTGAACTCTACAAAACCGCCGTGTGAACCTCAAGCCAATTTTTTTTAGTGTAATTGGCATATGTTGGTCATAATATCGCAGTCGTTTGCGCTTGTCACATATTGTTTTTCAACATTTTCAACAAATGCTACTTCACACTTCTCATTCAATATCTTGTAATCTTATCTTTTAAATTGGTCTAAATTTCTTGATGTCTGGTGTCCCAATTTGTTTACTTGATAGTCATAATATCCTGATTATTTATCCAAATTTGCCTAACATTCTTGGGCGAATTGTAACTGATTTATGTTACTGAATTTTTTACTGCCTTTACTTGATAGTCTATTCTATGGCTAGTAATTTATTTATTTTAATTTTAGTTGTTCATTGAATGCAGAGAGATATTAATATCCACCAATTCTTCACTGGTTACACAAGGGGTCGCAAGGATTGGCGCAATTGGCCTGAGGTGTTGAAATTGAAAGATTGGCCTCCTTCTGATTTATTTCAGGAACGTTTACCTCGTCATCATGCTGAGTTCATAACTTCCTTGCCTTATAAAGAATATACAAATCCTTTTAGTGGTTCTCTCAACCTTGCTGTGAAGTTGCCGGATTATTGTTTAAAGCCTGACATGGGGCCAAAAACATATATTGCTTATGGATTTGCTCATGATCTTGGACGTGGGGATTCAGTGACTAAGCTCCATTGTAATGTGTTTGATGATGTATGCTTCAAAACCTTTTCTCTTTCCTGTCATGAACCTCTTAATTATTTGAGTTTTTCTTCTTGTTCTTTTTCTTTCCAAAAGATTTTACTGTTATTATGATTCCAGTATCGTATTAAAAAGTGCATAATTTGTAGGACATATGCATTTTTGTTTTCGAAACCAATGCATTTATCTGTTCATTTTCGTATGAGCTGATTGTTGTGTAGTTTCAAGTACATGTTATAATTGTTTTGTTCATTGCACTGTCATAGATAATTTCATAATTTGATTTGTGGTGTTTTGGTAATTAATGATTCGAAAAAGTATTCCTTTTCTGACTAGTGACATAAACTGCAAAGTATATTTAGGAATGAATAATGAATGATACATTTCCTGATCAATTCTTTGTAATTTGGCTATAAGGTAAATGTGTTGGCGCATATCGCTAAAGTGGAACTGAAACCTGAGGAAATTACTGTCATTAAGAAATTGAGACATAAGCACCTTGAGCAAGATAAAAGGGAGCTAGTTGGTTATGGGGAGGCGGTTGATATGTTTCATCAACAATCTGACACTAATGATAGTGACTTGGTGGTTGGAGGGGACCCCTTAGAAGGTGCTATCTGGGATATTTTCCGGAGAGAGGATGTAACCAAATTGAAGGAATATATAAAGAAGCATTTTAGAGAGTTCAGACATGTAAATTGCAGTCCTTTAAAGCAGGTAAAATCAGCTTAGACAATTTTCTATTATCTAGCTTTATGGATTCCCCTCATGACCTTTTGGAGGGTTGCACTAGGATGAATTTGATTCTATCCCATACTTTCTTCTGAGTTAAGATTCAAATATACATGCAACAAAGGAATGGCGAAGGATCCAGCTTGTAATGAATAATAGTTGCTTGTTGTTGTATTTTCTTGAATGAGATATCCTTTGGTAATGTAGGTTATTGACCCCATTCATGATCATACCATTTATCTGACTATGGAGCATAAGATGAAACTTAAGGAGGAGTATGGTTAGTAATATTTATAAATATTCCTTTGTTGTTTGTTGAGTTAAATGATTTGATCATTCAAATGGAACCAATCTGTTGACATTTTATTACATTGACTTGCAGGAATTGAACCTTGGACTTTTATTCAGAAGCTTGGAGATGCTGTTTTCATTCCCGCTGGCTTGCCTCACCAAGTCAGAAATCTGAAGGTAAAATTTACATACAGTTTACAAGTTTCTGTTTGCCAAGAAGCGTATATATTTTTTGTTGGAGCAAGGAAAAACGGCTTAAATTAATTTAAGATCTGAATTGAGATCTGATTTATTTTGTGTTTTATCTCTTATCCTTTGTACTTGTCTTCTCTAAATTTTAGTAGATTGTTTGGTACTTAATAATTTGCAACTTTTCAAGGCTAAATTTGAATTTGGATATTTCCTAATTAGTATCGTGTGATCGCTTCAACCTATGATTTCTTGCAAATTGTTGAAGCCATACATCACAAACTCACTTTTTATTTCATGATTGCTTTTATGTTGAAACGATGCTTGAAATATCTGTGTTTATGTAATATATGCATTATTTTTTTGCAGTCATGCATCAAGGTTGCACTTGATTTTGTCTCTCCTGAAAATATTGGTGAGTGCTTGCGTTTGACAGAGGAATTCCGCCGGCTTCCGATAAATCACAGATCCGCCAAGGACAAGTTTGAGGTCTGTCATACTACTTTTATTGATTCGATTCTGCTTTTTCTATTTATTAGGATACATTGAATAGAAACTCAATTCATGAAAATAACTAAGTAATATGGAAAATAATCTCAATAGATAATCCAAATAAGAAACTAATCCTATGAGATAAACTAAAATATTCTAACATAACATTAGAATATCATAAGATTCTTTTCATATATTCTCACATACCGGAGGGCAAGTCTTGCATAACGGCATTGCTCATCCTTGTTGAATGTATGAAATCTTGATCATAAATCTATTTCAGTTCTACGTTCCTGTTTTATGCCATCATGTGTCAAGAATTTCTTTTTGGGATTTTATGAACTGTTTTTTCCTGATGGCTGCTTCTTGGTACCAGGTGAAGAAAATTGTCATACATGCTATGCTTGATGTAATTGAAAAATTAGAGAAAGAAAGGTTAGTGTGATTGCAAACTTCAAGTCTTTTAGTTATGAAGTTGTATGCTTACATTTCTTTATTAACCTTTTCGATTTTATGTCGAAGGCATTTATAGATTATATCTTATGTACAATTTAAAATTTGAGTATATTGTGTATGTGGTGAAAATTGATGATTGTGATTAAATTTACAGGTCTGAGAAAACCAAGGTATGCGCGTAA
Protein sequence

>MS.gene020982.t1

MAEEENNEIVTYRVKIKVTLTVPDPEEPIPDDETLPTLNVGAAETASLNNGEGSVEAGDVAAAATEESAPDREKQAMNGGPAETASLNNGENSVEAGDVAAAVAEESVPDREKQAMNLGANTVESLLTEDEMVARDSSSVKAAMEIMKRGRKSFAEIQKRKMDEEALLVSRIKEERDVVAGGSSSFQPERKKRGRKRKAEKESTQNEVPQVHKKLNTKLSSEESLACHQCKRSDTGRVIRCTKCKRRRYCIPCLNKWYPKLNESDVAEACPVCCDNCNCKACLRSFKLINEMKHKVETNNDEEVEFSKYMLKGLLPHLRRLDEEQMIEKEREAKRQGLSLSKLKIKPVDHSKDERVICDNCKTSIFDYHRSCTKCRFDLCLLCCCELRGGKLLGGADPIKIEYVSQTEDESTNREWSRSGWHANGDGSIPCPKADNECHHGFLEMRRILPPNCISELVCKANELAETIKLQDVEETCDNRCSCLKPVSNADVIHNNTTKAAFLENSSDRFLYCPRAVDLHHGDLRHFQWHWSKGEPVIVSNVLECTSGLSWEPKVMWRAFRQKTNSKYDEVLDVKAVNCIDWCERDINIHQFFTGYTRGRKDWRNWPEVLKLKDWPPSDLFQERLPRHHAEFITSLPYKEYTNPFSGSLNLAVKLPDYCLKPDMGPKTYIAYGFAHDLGRGDSVTKLHCNVFDDVNVLAHIAKVELKPEEITVIKKLRHKHLEQDKRELVGYGEAVDMFHQQSDTNDSDLVVGGDPLEGAIWDIFRREDVTKLKEYIKKHFREFRHVNCSPLKQVIDPIHDHTIYLTMEHKMKLKEEYGIEPWTFIQKLGDAVFIPAGLPHQVRNLKSCIKVALDFVSPENIGECLRLTEEFRRLPINHRSAKDKFEVKKIVIHAMLDVIEKLEKERSEKTKVCA