AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene021062

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene021062.t1 MTR_4g063100 97.244 254 6 1 1 254 1 253 0.0 514
MS.gene021062.t1 MTR_4g063100 95.023 221 10 1 34 254 5 224 3.99e-156 433
MS.gene021062.t1 MTR_4g063100 96.316 190 6 1 65 254 1 189 4.44e-135 378
MS.gene021062.t1 MTR_4g063100 96.512 172 5 1 83 254 6 176 3.14e-121 343
MS.gene021062.t1 MTR_4g063100 96.622 148 4 1 107 254 1 147 1.33e-101 292
MS.gene021062.t1 MTR_2g096380 58.238 261 64 12 1 244 1 233 2.54e-84 251
MS.gene021062.t1 MTR_2g096380 54.018 224 59 11 38 244 18 214 1.44e-59 188
MS.gene021062.t1 MTR_1g045610 65.455 110 38 0 1 110 15 124 2.98e-51 168
MS.gene021062.t1 MTR_1g073170 66.019 103 35 0 8 110 21 123 2.53e-48 160
MS.gene021062.t1 MTR_1g110460 63.208 106 39 0 8 113 27 132 2.66e-48 162
MS.gene021062.t1 MTR_1g086530 58.974 117 45 1 2 115 25 141 5.97e-47 157
MS.gene021062.t1 MTR_7g035075 60.377 106 42 0 8 113 15 120 1.49e-45 152
MS.gene021062.t1 MTR_1g062940 64.078 103 37 0 8 110 7 109 1.73e-45 152
MS.gene021062.t1 MTR_6g006030 60.377 106 42 0 8 113 15 120 1.93e-45 151
MS.gene021062.t1 MTR_1g086510 60.185 108 43 0 8 115 22 129 6.00e-44 149
MS.gene021062.t1 MTR_4g102380 62.136 103 39 0 8 110 13 115 7.05e-42 144
MS.gene021062.t1 MTR_3g097450 57.944 107 45 0 4 110 9 115 1.31e-40 142
MS.gene021062.t1 MTR_4g100720 51.128 133 57 2 3 127 9 141 1.62e-40 138
MS.gene021062.t1 MTR_5g078140 39.698 199 102 4 8 192 13 207 2.20e-40 142
MS.gene021062.t1 MTR_8g027345 53.719 121 54 1 9 129 14 132 3.31e-40 140
MS.gene021062.t1 MTR_2g096380 49.746 197 55 11 65 244 1 170 4.53e-40 136
MS.gene021062.t1 MTR_7g076740 50.370 135 61 3 8 136 13 147 5.27e-40 140
MS.gene021062.t1 MTR_5g029840 59.223 103 42 0 8 110 13 115 7.24e-40 140
MS.gene021062.t1 MTR_7g117730 58.824 102 42 0 9 110 14 115 1.36e-39 138
MS.gene021062.t1 MTR_3g065440 40.580 207 110 6 8 207 13 213 1.44e-39 139
MS.gene021062.t1 MTR_3g074520 56.604 106 46 0 8 113 13 118 2.67e-39 139
MS.gene021062.t1 MTR_4g073420 49.630 135 67 1 7 140 12 146 2.73e-39 138
MS.gene021062.t1 MTR_4g091490 57.282 103 44 0 8 110 14 116 3.76e-39 139
MS.gene021062.t1 MTR_1g076150 47.761 134 70 0 8 141 13 146 3.82e-39 137
MS.gene021062.t1 MTR_1g112760 54.206 107 49 0 8 114 14 120 5.90e-39 135
MS.gene021062.t1 MTR_4g485530 50.376 133 63 2 9 141 14 143 1.02e-38 134
MS.gene021062.t1 MTR_2g089620 57.282 103 44 0 8 110 13 115 1.07e-38 137
MS.gene021062.t1 MTR_3g077110 54.206 107 49 0 8 114 13 119 1.22e-38 138
MS.gene021062.t1 MTR_2g011660 58.252 103 43 0 8 110 14 116 1.25e-38 137
MS.gene021062.t1 MTR_5g079670 56.863 102 44 0 9 110 13 114 2.03e-38 134
MS.gene021062.t1 MTR_7g115650 55.340 103 46 0 8 110 13 115 2.23e-38 133
MS.gene021062.t1 MTR_7g096930 54.630 108 49 0 8 115 13 120 2.43e-38 135
MS.gene021062.t1 MTR_3g083540 57.282 103 44 0 8 110 42 144 3.50e-38 135
MS.gene021062.t1 MTR_2g099740 53.398 103 48 0 8 110 13 115 4.05e-38 137
MS.gene021062.t1 MTR_2g033170 58.333 108 45 0 8 115 25 132 4.29e-38 136
MS.gene021062.t1 MTR_8g017440 54.369 103 47 0 8 110 13 115 5.29e-38 136
MS.gene021062.t1 MTR_8g031360 57.692 104 43 1 8 110 14 117 6.54e-38 134
MS.gene021062.t1 MTR_4g065017 52.586 116 55 0 8 123 18 133 7.59e-38 135
MS.gene021062.t1 MTR_7g011170 57.282 103 44 0 8 110 13 115 1.26e-37 134
MS.gene021062.t1 MTR_2g097910 51.613 124 56 1 8 131 21 140 1.28e-37 134
MS.gene021062.t1 MTR_4g082290 57.282 103 44 0 8 110 13 115 1.31e-37 136
MS.gene021062.t1 MTR_1g085040 55.660 106 47 0 8 113 13 118 1.56e-37 135
MS.gene021062.t1 MTR_3g028740 55.046 109 49 0 2 110 17 125 1.74e-37 134
MS.gene021062.t1 MTR_4g478180 54.717 106 48 0 8 113 14 119 2.15e-37 134
MS.gene021062.t1 MTR_4g125520 50.407 123 57 1 2 120 7 129 2.42e-37 133
MS.gene021062.t1 MTR_1g100653 46.565 131 70 0 8 138 13 143 2.48e-37 133
MS.gene021062.t1 MTR_7g110830 56.075 107 47 0 8 114 13 119 3.55e-37 134
MS.gene021062.t1 MTR_4g082230 56.311 103 45 0 8 110 13 115 3.61e-37 135
MS.gene021062.t1 MTR_1g043080 54.369 103 47 0 8 110 13 115 3.76e-37 131
MS.gene021062.t1 MTR_8g095390 53.846 104 48 0 7 110 12 115 3.96e-37 133
MS.gene021062.t1 MTR_0008s0390 56.311 103 45 0 8 110 14 116 4.05e-37 132
MS.gene021062.t1 MTR_0251s0050 56.311 103 45 0 8 110 14 116 4.05e-37 132
MS.gene021062.t1 MTR_5g007370 53.774 106 49 0 8 113 13 118 4.48e-37 132
MS.gene021062.t1 MTR_2g034790 55.340 103 46 0 8 110 13 115 6.46e-37 133
MS.gene021062.t1 MTR_4g123040 56.481 108 47 0 8 115 25 132 7.17e-37 132
MS.gene021062.t1 MTR_8g017540 44.056 143 73 2 8 145 59 199 1.12e-36 134
MS.gene021062.t1 MTR_2g067420 57.576 99 42 0 8 106 15 113 1.41e-36 132
MS.gene021062.t1 MTR_8g017500 44.056 143 73 2 8 145 13 153 1.53e-36 132
MS.gene021062.t1 MTR_4g121460 56.311 103 45 0 8 110 13 115 1.81e-36 132
MS.gene021062.t1 MTR_2g089450 48.780 123 63 0 8 130 13 135 1.86e-36 129
MS.gene021062.t1 MTR_0008s0280 54.369 103 47 0 7 109 12 114 2.00e-36 129
MS.gene021062.t1 MTR_6g055910 51.852 108 52 0 8 115 15 122 2.70e-36 130
MS.gene021062.t1 MTR_1g085640 54.206 107 49 0 8 114 13 119 3.02e-36 132
MS.gene021062.t1 MTR_4g105130 54.206 107 49 0 8 114 13 119 3.18e-36 132
MS.gene021062.t1 MTR_8g017390 51.818 110 52 1 2 110 7 116 3.33e-36 134
MS.gene021062.t1 MTR_1g021230 38.378 185 92 5 8 192 58 220 4.64e-36 133
MS.gene021062.t1 MTR_2g064160 48.624 109 56 0 2 110 6 114 5.92e-36 130
MS.gene021062.t1 MTR_6g012690 55.340 103 46 0 8 110 13 115 6.21e-36 131
MS.gene021062.t1 MTR_3g461490 54.369 103 47 0 8 110 13 115 7.39e-36 130
MS.gene021062.t1 MTR_3g011610 55.238 105 47 0 6 110 36 140 7.50e-36 133
MS.gene021062.t1 MTR_1g043050 50.000 110 55 0 8 117 13 122 8.05e-36 128
MS.gene021062.t1 MTR_2g089420 53.211 109 51 0 8 116 12 120 9.60e-36 132
MS.gene021062.t1 MTR_1g100667 52.830 106 50 0 8 113 14 119 1.17e-35 128
MS.gene021062.t1 MTR_0008s0470 54.369 103 47 0 8 110 14 116 1.23e-35 129
MS.gene021062.t1 MTR_6g009430 54.369 103 47 0 8 110 13 115 1.57e-35 129
MS.gene021062.t1 MTR_8g098860 51.376 109 53 0 2 110 7 115 1.58e-35 129
MS.gene021062.t1 MTR_3g052430 51.887 106 51 0 8 113 42 147 2.04e-35 132
MS.gene021062.t1 MTR_8g017340 50.909 110 53 1 2 110 7 116 2.49e-35 132
MS.gene021062.t1 MTR_3g052450 43.262 141 71 2 8 143 41 177 3.27e-35 132
MS.gene021062.t1 MTR_8g042410 53.333 105 49 0 6 110 36 140 3.28e-35 132
MS.gene021062.t1 MTR_8g020490 53.922 102 47 0 9 110 10 111 5.71e-35 125
MS.gene021062.t1 MTR_7g010210 36.449 214 102 3 4 211 9 194 7.86e-35 126
MS.gene021062.t1 MTR_8g017350 50.000 110 54 1 2 110 7 116 1.02e-34 131
MS.gene021062.t1 MTR_7g111290 57.732 97 41 0 8 104 13 109 1.39e-34 128
MS.gene021062.t1 MTR_7g010210 36.449 214 102 3 4 211 9 194 1.48e-34 126
MS.gene021062.t1 MTR_5g010020 50.962 104 51 0 2 105 7 110 4.62e-34 125
MS.gene021062.t1 MTR_5g079120 51.402 107 52 0 8 114 62 168 8.24e-34 124
MS.gene021062.t1 MTR_0063s0090 41.667 132 76 1 8 138 13 144 1.26e-33 121
MS.gene021062.t1 MTR_7g087130 47.458 118 62 0 8 125 13 130 1.50e-33 124
MS.gene021062.t1 MTR_2g088170 53.846 104 48 0 8 111 30 133 1.86e-33 126
MS.gene021062.t1 MTR_1g017000 48.148 108 55 1 4 110 9 116 5.82e-33 120
MS.gene021062.t1 MTR_5g078910 50.485 103 51 0 8 110 8 110 1.22e-32 121
MS.gene021062.t1 MTR_8g060940 51.000 100 49 0 8 107 8 107 2.74e-32 119
MS.gene021062.t1 MTR_3g039990 50.485 103 51 0 8 110 14 116 3.57e-32 120
MS.gene021062.t1 MTR_5g078930 46.218 119 61 1 1 116 3 121 6.36e-32 117
MS.gene021062.t1 MTR_5g079290 50.485 103 51 0 8 110 18 120 8.58e-32 118
MS.gene021062.t1 MTR_0197s0010 49.000 100 51 0 11 110 5 104 1.83e-31 116
MS.gene021062.t1 MTR_0140s0030 47.222 108 57 0 8 115 14 121 2.37e-31 118
MS.gene021062.t1 MTR_0489s0020 47.222 108 57 0 8 115 14 121 2.37e-31 118
MS.gene021062.t1 MTR_5g042030 49.515 103 52 0 8 110 8 110 3.43e-31 117
MS.gene021062.t1 MTR_5g079220 49.515 103 52 0 8 110 22 124 3.46e-31 116
MS.gene021062.t1 MTR_1g083630 51.456 103 50 0 8 110 13 115 6.59e-31 120
MS.gene021062.t1 MTR_0247s0040 49.074 108 55 0 1 108 1 108 7.67e-31 113
MS.gene021062.t1 MTR_5g078800 50.485 103 51 0 8 110 8 110 1.08e-30 115
MS.gene021062.t1 MTR_3g103570 43.077 130 68 2 8 131 13 142 1.30e-30 116
MS.gene021062.t1 MTR_6g055910 56.098 82 36 0 34 115 12 93 2.10e-30 114
MS.gene021062.t1 MTR_8g006470 50.467 107 52 1 4 109 7 113 2.32e-30 114
MS.gene021062.t1 MTR_7g109320 53.398 103 48 0 8 110 13 115 3.41e-30 115
MS.gene021062.t1 MTR_5g078950 48.515 101 52 0 8 108 8 108 3.45e-30 114
MS.gene021062.t1 MTR_5g088640 43.077 130 69 3 7 134 12 138 4.27e-30 114
MS.gene021062.t1 MTR_5g088080 43.077 130 69 3 7 134 12 138 4.49e-30 113
MS.gene021062.t1 MTR_5g088150 43.077 130 69 3 7 134 12 138 4.49e-30 113
MS.gene021062.t1 MTR_5g488210 43.077 130 69 3 7 134 12 138 4.49e-30 113
MS.gene021062.t1 MTR_6g012180 49.515 103 52 0 4 106 9 111 4.57e-30 114
MS.gene021062.t1 MTR_6g090405 41.221 131 71 2 8 132 13 143 5.04e-30 113
MS.gene021062.t1 MTR_0001s0360 48.544 103 53 0 8 110 8 110 6.21e-30 112
MS.gene021062.t1 MTR_5g078860 48.544 103 53 0 8 110 8 110 7.41e-30 114
MS.gene021062.t1 MTR_7g017260 46.154 117 59 2 8 120 26 142 9.10e-30 112
MS.gene021062.t1 MTR_4g019370 47.273 110 55 2 9 117 38 145 9.91e-30 114
MS.gene021062.t1 MTR_5g488170 43.077 130 69 3 7 134 12 138 1.17e-29 112
MS.gene021062.t1 MTR_0193s0090 44.538 119 66 0 1 119 1 119 1.48e-29 110
MS.gene021062.t1 MTR_1g017140 49.038 104 52 1 8 110 13 116 2.43e-29 113
MS.gene021062.t1 MTR_7g102110 47.115 104 54 1 8 110 13 116 2.69e-29 111
MS.gene021062.t1 MTR_5g014990 48.113 106 50 2 8 110 13 116 4.97e-29 111
MS.gene021062.t1 MTR_4g029540 47.458 118 59 2 8 124 11 126 5.10e-29 111
MS.gene021062.t1 MTR_5g088610 36.527 167 91 3 7 172 9 161 5.77e-29 112
MS.gene021062.t1 MTR_5g062790 44.348 115 60 2 7 120 9 120 7.54e-29 111
MS.gene021062.t1 MTR_2g095520 43.511 131 67 3 8 131 13 143 2.51e-28 110
MS.gene021062.t1 MTR_4g057635 47.115 104 54 1 8 110 13 116 3.53e-28 109
MS.gene021062.t1 MTR_5g070020 44.094 127 66 3 3 126 116 240 6.97e-28 109
MS.gene021062.t1 MTR_4g094982 44.660 103 54 2 9 110 5 105 1.31e-27 107
MS.gene021062.t1 MTR_5g016510 47.059 102 53 1 9 110 5 105 1.94e-27 107
MS.gene021062.t1 MTR_4g097570 49.485 97 48 1 8 103 13 109 2.10e-27 107
MS.gene021062.t1 MTR_7g111290 68.657 67 21 0 38 104 1 67 2.17e-27 108
MS.gene021062.t1 MTR_7g061330 49.020 102 51 1 9 110 113 213 5.11e-27 109
MS.gene021062.t1 MTR_7g061330 37.000 100 61 2 9 107 61 159 3.20e-13 69.3
MS.gene021062.t1 MTR_7g461410 49.020 102 51 1 9 110 113 213 5.11e-27 109
MS.gene021062.t1 MTR_7g461410 37.000 100 61 2 9 107 61 159 3.20e-13 69.3
MS.gene021062.t1 MTR_4g128670 48.485 99 50 1 8 105 13 111 6.39e-27 107
MS.gene021062.t1 MTR_7g037260 46.018 113 60 1 9 121 145 256 6.74e-27 107
MS.gene021062.t1 MTR_4g097570 49.495 99 46 2 8 103 13 110 1.06e-26 105
MS.gene021062.t1 MTR_3g463400 43.307 127 67 3 9 134 133 255 1.10e-26 107
MS.gene021062.t1 MTR_7g061330 49.020 102 51 1 9 110 77 177 1.13e-26 108
MS.gene021062.t1 MTR_7g061330 37.000 100 61 2 9 107 25 123 5.10e-13 68.6
MS.gene021062.t1 MTR_6g015455 46.078 102 54 1 9 110 5 105 9.67e-26 106
MS.gene021062.t1 MTR_3g101290 44.660 103 54 2 9 110 37 137 1.10e-25 100
MS.gene021062.t1 MTR_5g041570 48.544 103 50 2 9 110 134 234 1.21e-25 104
MS.gene021062.t1 MTR_4g082040 45.217 115 59 3 5 117 101 213 2.06e-25 103
MS.gene021062.t1 MTR_3g045430 43.519 108 61 0 6 113 12 119 3.03e-25 101
MS.gene021062.t1 MTR_5g049190 47.059 102 51 2 9 109 19 118 3.63e-25 100
MS.gene021062.t1 MTR_7g451170 44.248 113 62 1 9 121 191 302 1.22e-24 101
MS.gene021062.t1 MTR_7g450950 40.367 109 64 1 9 117 157 264 1.54e-24 100
MS.gene021062.t1 MTR_4g105660 45.283 106 55 2 6 110 177 280 2.15e-24 101
MS.gene021062.t1 MTR_6g074860 43.411 129 66 3 9 131 4 131 5.60e-24 97.1
MS.gene021062.t1 MTR_5g082910 46.000 100 51 2 9 107 19 116 6.79e-24 97.8
MS.gene021062.t1 MTR_3g077650 42.991 107 60 1 9 115 181 286 1.84e-23 98.6
MS.gene021062.t1 MTR_4g088015 42.478 113 64 1 9 121 221 332 3.42e-23 97.8
MS.gene021062.t1 MTR_6g027370 37.931 145 81 3 5 142 95 237 1.38e-22 95.1
MS.gene021062.t1 MTR_3g110028 41.748 103 57 2 9 110 85 185 1.49e-22 97.1
MS.gene021062.t1 MTR_3g110028 34.314 102 65 2 7 107 31 131 8.95e-12 65.1
MS.gene021062.t1 MTR_5g010650 35.028 177 104 3 9 177 110 283 2.85e-22 95.5
MS.gene021062.t1 MTR_6g027340 40.566 106 58 3 9 113 16 117 5.92e-22 90.5
MS.gene021062.t1 MTR_7g035350 41.880 117 67 1 12 128 228 343 7.55e-22 94.0
MS.gene021062.t1 MTR_7g037130 42.478 113 64 1 9 121 145 256 8.91e-22 93.2
MS.gene021062.t1 MTR_3g089045 47.706 109 53 3 9 115 16 122 9.27e-22 92.0
MS.gene021062.t1 MTR_6g027360 42.453 106 56 3 9 113 78 179 1.48e-21 91.7
MS.gene021062.t1 MTR_1g026870 40.777 103 58 2 9 110 85 185 1.63e-21 94.0
MS.gene021062.t1 MTR_1g026870 35.294 102 64 2 7 107 31 131 1.82e-12 67.4
MS.gene021062.t1 MTR_5g007300 51.316 76 37 0 8 83 65 140 1.68e-21 87.8
MS.gene021062.t1 MTR_4g128190 40.777 103 47 2 8 109 12 101 1.78e-21 90.1
MS.gene021062.t1 MTR_1g057980 35.465 172 84 5 8 155 79 247 2.48e-21 90.9
MS.gene021062.t1 MTR_7g086960 42.342 111 60 3 5 113 85 193 1.06e-20 90.1
MS.gene021062.t1 MTR_1g085880 32.317 164 96 3 2 164 7 156 5.90e-20 85.1
MS.gene021062.t1 MTR_1g085770 32.317 164 96 3 2 164 7 156 2.26e-19 85.9
MS.gene021062.t1 MTR_7g061550 35.849 106 66 1 12 115 10 115 2.27e-18 83.6
MS.gene021062.t1 MTR_5g038910 40.196 102 59 2 12 113 29 128 5.42e-18 83.2
MS.gene021062.t1 MTR_5g038910 40.196 102 59 2 12 113 29 128 5.77e-18 82.8
MS.gene021062.t1 MTR_8g468380 39.216 102 60 2 12 113 25 124 4.54e-16 77.4
MS.gene021062.t1 MTR_6g055910 52.941 51 24 0 65 115 2 52 4.41e-14 69.7
MS.gene021062.t1 MTR_0023s0210 35.526 76 49 0 8 83 8 83 8.40e-13 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene021062.t1 AT3G46130 53.725 255 97 8 1 243 3 248 2.41e-77 234
MS.gene021062.t1 AT5G59780 57.576 231 80 7 2 231 3 216 3.41e-76 231
MS.gene021062.t1 AT3G46130 50.935 214 92 6 38 243 8 216 2.77e-55 177
MS.gene021062.t1 AT3G46130 50.943 212 91 6 40 243 20 226 1.27e-54 176
MS.gene021062.t1 AT5G59780 54.404 193 70 7 40 231 20 195 2.63e-54 174
MS.gene021062.t1 AT4G13480 55.474 137 54 1 2 138 1 130 6.28e-51 167
MS.gene021062.t1 AT3G24310 69.903 103 31 0 8 110 19 121 5.41e-50 165
MS.gene021062.t1 AT3G53200 65.741 108 37 0 4 111 6 113 1.01e-49 163
MS.gene021062.t1 AT3G30210 42.731 227 99 4 8 228 28 229 1.14e-49 164
MS.gene021062.t1 AT3G27810 53.623 138 61 1 8 145 21 155 4.02e-49 161
MS.gene021062.t1 AT5G40350 39.450 218 106 3 8 225 18 209 2.48e-47 156
MS.gene021062.t1 AT1G25340 63.208 106 39 0 8 113 19 124 5.01e-47 158
MS.gene021062.t1 AT1G68320 62.264 106 40 0 8 113 20 125 2.46e-46 156
MS.gene021062.t1 AT2G47190 64.078 103 37 0 8 110 21 123 8.74e-46 154
MS.gene021062.t1 AT1G48000 59.804 102 41 0 8 109 33 134 6.21e-44 149
MS.gene021062.t1 AT1G79180 42.079 202 97 5 8 192 15 213 7.43e-44 150
MS.gene021062.t1 AT3G01530 41.618 173 91 3 8 174 26 194 1.73e-43 146
MS.gene021062.t1 AT1G25340 60.377 106 37 1 8 113 19 119 2.28e-42 145
MS.gene021062.t1 AT1G25340 60.377 106 37 1 8 113 19 119 5.04e-42 145
MS.gene021062.t1 AT4G12350 43.158 190 93 5 6 191 11 189 5.68e-41 142
MS.gene021062.t1 AT5G10280 57.547 106 45 0 8 113 13 118 9.21e-41 143
MS.gene021062.t1 AT5G52600 40.107 187 108 1 8 194 13 195 3.08e-40 138
MS.gene021062.t1 AT2G31180 55.660 106 47 0 8 113 13 118 4.52e-40 139
MS.gene021062.t1 AT1G66230 61.165 103 40 0 8 110 13 115 5.38e-40 140
MS.gene021062.t1 AT4G22680 60.194 103 41 0 8 110 13 115 8.58e-40 139
MS.gene021062.t1 AT4G38620 51.538 130 60 1 7 136 12 138 1.20e-39 139
MS.gene021062.t1 AT3G06490 57.407 108 46 0 8 115 20 127 2.71e-39 139
MS.gene021062.t1 AT4G05100 58.252 103 43 0 8 110 14 116 2.83e-39 139
MS.gene021062.t1 AT1G06180 56.311 103 45 0 8 110 13 115 2.97e-39 137
MS.gene021062.t1 AT5G16770 58.491 106 44 0 8 113 13 118 4.32e-39 138
MS.gene021062.t1 AT5G16770 58.491 106 44 0 8 113 13 118 4.32e-39 138
MS.gene021062.t1 AT5G16770 58.491 106 44 0 8 113 13 118 6.71e-39 138
MS.gene021062.t1 AT5G16770 58.491 106 44 0 8 113 13 118 6.71e-39 138
MS.gene021062.t1 AT4G28110 57.282 103 44 0 8 110 13 115 6.87e-39 137
MS.gene021062.t1 AT3G02940 58.491 106 44 0 8 113 13 118 7.78e-39 137
MS.gene021062.t1 AT4G17785 42.945 163 89 1 8 166 14 176 8.54e-39 138
MS.gene021062.t1 AT3G01140 47.826 138 66 1 8 139 13 150 9.61e-39 138
MS.gene021062.t1 AT4G17785 42.945 163 89 1 8 166 14 176 9.82e-39 138
MS.gene021062.t1 AT5G65230 54.717 106 48 0 8 113 13 118 1.12e-38 137
MS.gene021062.t1 AT5G14750 58.252 103 43 0 8 110 17 119 1.18e-38 134
MS.gene021062.t1 AT3G02940 58.491 106 44 0 8 113 13 118 1.26e-38 137
MS.gene021062.t1 AT3G02940 58.491 106 44 0 8 113 13 118 1.26e-38 137
MS.gene021062.t1 AT3G13540 57.009 107 46 0 8 114 24 130 1.40e-38 135
MS.gene021062.t1 AT5G16600 60.194 103 41 0 8 110 13 115 1.46e-38 137
MS.gene021062.t1 AT4G21440 58.252 103 43 0 8 110 13 115 1.64e-38 137
MS.gene021062.t1 AT3G01140 47.826 138 66 1 8 139 56 193 2.01e-38 138
MS.gene021062.t1 AT1G09540 57.547 106 45 0 8 113 13 118 2.10e-38 137
MS.gene021062.t1 AT5G26660 57.282 103 44 0 8 110 13 115 3.05e-38 137
MS.gene021062.t1 AT3G27810 56.604 106 43 1 40 145 4 106 4.36e-38 132
MS.gene021062.t1 AT1G16490 52.336 107 51 0 8 114 15 121 4.56e-38 134
MS.gene021062.t1 AT3G48920 51.538 130 58 1 1 125 12 141 4.71e-38 134
MS.gene021062.t1 AT3G13890 54.369 103 47 0 8 110 13 115 6.14e-38 136
MS.gene021062.t1 AT1G79180 36.170 235 97 6 8 192 15 246 6.23e-38 135
MS.gene021062.t1 AT5G54230 57.282 103 44 0 8 110 13 115 7.75e-38 135
MS.gene021062.t1 AT4G34990 56.731 104 45 0 7 110 12 115 1.04e-37 134
MS.gene021062.t1 AT2G16720 56.863 102 44 0 9 110 14 115 1.53e-37 133
MS.gene021062.t1 AT5G49620 56.481 108 47 0 8 115 27 134 1.66e-37 134
MS.gene021062.t1 AT4G09460 55.769 104 46 0 7 110 12 115 1.70e-37 132
MS.gene021062.t1 AT3G23250 52.991 117 54 1 8 124 13 128 1.81e-37 133
MS.gene021062.t1 AT1G57560 56.311 103 45 0 8 110 13 115 2.01e-37 133
MS.gene021062.t1 AT1G57560 56.311 103 45 0 8 110 13 115 2.04e-37 134
MS.gene021062.t1 AT5G14340 57.282 103 44 0 8 110 25 127 2.10e-37 133
MS.gene021062.t1 AT4G26930 51.852 108 52 0 6 113 18 125 2.22e-37 135
MS.gene021062.t1 AT5G40330 57.282 103 44 0 8 110 13 115 2.45e-37 131
MS.gene021062.t1 AT2G32460 56.604 106 45 1 8 112 19 124 2.47e-37 137
MS.gene021062.t1 AT2G32460 56.604 106 45 1 8 112 7 112 2.60e-37 137
MS.gene021062.t1 AT3G08500 59.223 103 42 0 8 110 31 133 4.96e-37 133
MS.gene021062.t1 AT5G12870 57.282 103 44 0 8 110 19 121 4.98e-37 132
MS.gene021062.t1 AT5G07690 49.612 129 61 1 8 132 13 141 4.98e-37 133
MS.gene021062.t1 AT1G22640 56.863 102 44 0 9 110 14 115 5.69e-37 131
MS.gene021062.t1 AT1G34670 54.717 106 48 0 8 113 13 118 5.81e-37 134
MS.gene021062.t1 AT1G35515 56.863 102 44 0 9 110 14 115 6.60e-37 130
MS.gene021062.t1 AT5G40350 39.247 186 87 3 40 225 5 164 8.27e-37 128
MS.gene021062.t1 AT3G61250 56.311 103 45 0 8 110 13 115 9.14e-37 132
MS.gene021062.t1 AT5G15310 56.311 103 45 0 8 110 13 115 1.27e-36 130
MS.gene021062.t1 AT4G01680 56.311 103 45 0 8 110 13 115 1.49e-36 129
MS.gene021062.t1 AT5G62320 56.364 110 41 1 8 110 14 123 1.69e-36 129
MS.gene021062.t1 AT5G15310 56.311 103 45 0 8 110 13 115 1.83e-36 132
MS.gene021062.t1 AT5G15310 54.717 106 48 0 8 113 13 118 2.14e-36 131
MS.gene021062.t1 AT4G01680 56.311 103 45 0 8 110 13 115 3.28e-36 131
MS.gene021062.t1 AT2G47460 57.282 103 44 0 8 110 13 115 3.47e-36 132
MS.gene021062.t1 AT3G27920 48.333 120 62 0 8 127 15 134 4.42e-36 128
MS.gene021062.t1 AT5G56110 54.206 107 49 0 4 110 9 115 4.62e-36 130
MS.gene021062.t1 AT1G56160 52.427 103 49 0 8 110 15 117 5.34e-36 129
MS.gene021062.t1 AT3G46130 45.026 191 84 8 65 243 1 182 7.36e-36 126
MS.gene021062.t1 AT2G26960 57.426 101 43 0 9 109 22 122 8.05e-36 132
MS.gene021062.t1 AT5G59780 49.405 168 67 7 65 231 1 151 1.24e-35 125
MS.gene021062.t1 AT5G55020 53.846 104 48 0 6 109 25 128 1.49e-35 132
MS.gene021062.t1 AT5G60890 49.550 111 56 0 4 114 9 119 1.49e-35 128
MS.gene021062.t1 AT1G18570 53.271 107 50 0 8 114 14 120 2.08e-35 129
MS.gene021062.t1 AT5G07700 35.146 239 124 6 8 218 13 248 2.62e-35 129
MS.gene021062.t1 AT5G07700 35.146 239 124 6 8 218 13 248 2.62e-35 129
MS.gene021062.t1 AT3G28470 56.122 98 43 0 8 105 13 110 2.96e-35 128
MS.gene021062.t1 AT3G62610 54.369 103 47 0 8 110 13 115 3.22e-35 129
MS.gene021062.t1 AT3G12820 51.456 103 50 0 8 110 15 117 4.17e-35 125
MS.gene021062.t1 AT4G25560 52.830 106 50 0 5 110 8 113 4.45e-35 127
MS.gene021062.t1 AT5G61420 51.402 107 52 0 8 114 13 119 4.55e-35 129
MS.gene021062.t1 AT3G13890 50.000 112 47 1 8 110 13 124 5.77e-35 129
MS.gene021062.t1 AT1G63910 45.238 126 66 1 2 124 7 132 6.03e-35 129
MS.gene021062.t1 AT5G35550 43.939 132 74 0 2 133 9 140 7.17e-35 125
MS.gene021062.t1 AT3G53200 73.611 72 19 0 40 111 9 80 9.52e-35 124
MS.gene021062.t1 AT1G66370 49.180 122 59 1 8 126 9 130 1.58e-34 124
MS.gene021062.t1 AT1G74430 50.467 107 53 0 8 114 13 119 1.98e-34 125
MS.gene021062.t1 AT5G52260 48.438 128 64 1 8 133 13 140 2.60e-34 124
MS.gene021062.t1 AT5G49330 54.369 103 47 0 8 110 13 115 2.62e-34 126
MS.gene021062.t1 AT5G06100 51.923 104 50 0 8 111 33 136 4.91e-34 127
MS.gene021062.t1 AT3G11440 48.148 108 56 0 4 111 38 145 5.20e-34 128
MS.gene021062.t1 AT5G49620 50.000 122 47 1 8 115 27 148 6.86e-34 125
MS.gene021062.t1 AT1G74080 52.941 102 48 0 8 109 13 114 7.75e-34 125
MS.gene021062.t1 AT3G47600 41.892 148 79 1 8 155 13 153 8.88e-34 125
MS.gene021062.t1 AT3G12720 47.573 103 54 0 8 110 23 125 9.38e-34 124
MS.gene021062.t1 AT5G06100 51.923 104 50 0 8 111 33 136 1.51e-33 127
MS.gene021062.t1 AT5G06100 51.923 104 50 0 8 111 33 136 1.51e-33 127
MS.gene021062.t1 AT5G06100 51.923 104 50 0 8 111 33 136 1.51e-33 127
MS.gene021062.t1 AT5G06100 51.923 104 50 0 8 111 33 136 1.51e-33 127
MS.gene021062.t1 AT3G11440 48.148 108 56 0 4 111 38 145 1.81e-33 127
MS.gene021062.t1 AT3G11440 48.148 108 56 0 4 111 38 145 1.81e-33 127
MS.gene021062.t1 AT3G11440 48.148 108 56 0 4 111 38 145 1.81e-33 127
MS.gene021062.t1 AT4G01680 50.435 115 45 1 8 110 13 127 9.13e-33 122
MS.gene021062.t1 AT1G08810 41.727 139 71 1 8 136 13 151 1.88e-32 120
MS.gene021062.t1 AT1G18710 46.729 107 57 0 8 114 13 119 6.57e-32 118
MS.gene021062.t1 AT1G74650 49.074 108 55 0 8 115 13 120 1.02e-31 119
MS.gene021062.t1 AT3G28910 50.485 103 51 0 8 110 13 115 2.37e-31 118
MS.gene021062.t1 AT5G62470 50.485 103 51 0 8 110 13 115 5.15e-31 118
MS.gene021062.t1 AT5G26660 67.606 71 23 0 40 110 14 84 1.96e-30 115
MS.gene021062.t1 AT5G14750 59.756 82 28 1 34 110 4 85 2.39e-30 111
MS.gene021062.t1 AT5G57620 45.946 111 59 1 8 117 13 123 6.46e-30 114
MS.gene021062.t1 AT1G66380 53.398 103 48 0 8 110 9 111 8.97e-30 109
MS.gene021062.t1 AT3G49690 46.429 112 55 2 8 116 13 122 1.13e-29 113
MS.gene021062.t1 AT5G62470 50.485 103 50 1 8 110 13 114 1.55e-29 114
MS.gene021062.t1 AT5G35550 47.222 108 57 0 26 133 36 143 2.22e-29 111
MS.gene021062.t1 AT1G56650 46.774 124 61 1 8 126 9 132 2.26e-29 111
MS.gene021062.t1 AT5G23000 48.077 104 53 1 8 110 13 116 6.91e-29 112
MS.gene021062.t1 AT4G37780 45.536 112 60 1 8 118 13 124 7.40e-29 111
MS.gene021062.t1 AT5G65790 45.536 112 56 2 8 116 13 122 1.13e-28 112
MS.gene021062.t1 AT3G60460 49.565 115 55 2 4 117 8 120 1.22e-28 110
MS.gene021062.t1 AT1G66390 51.456 103 50 0 8 110 9 111 1.58e-28 108
MS.gene021062.t1 AT2G39880 47.664 107 53 2 9 114 50 154 3.49e-28 110
MS.gene021062.t1 AT2G26950 46.729 107 55 1 9 115 18 122 1.05e-27 109
MS.gene021062.t1 AT3G09230 49.020 102 51 1 9 110 55 155 1.19e-27 109
MS.gene021062.t1 AT2G36890 46.226 106 52 2 8 110 13 116 1.07e-26 105
MS.gene021062.t1 AT3G47600 44.828 116 57 1 40 155 39 147 1.49e-26 105
MS.gene021062.t1 AT2G36890 46.226 106 52 2 8 110 54 157 1.57e-26 105
MS.gene021062.t1 AT3G55730 47.619 105 52 2 9 112 56 158 1.78e-26 106
MS.gene021062.t1 AT3G12820 59.155 71 29 0 43 113 2 72 1.92e-26 102
MS.gene021062.t1 AT1G69560 38.255 149 76 4 9 143 107 253 5.58e-26 103
MS.gene021062.t1 AT1G69560 38.255 149 76 4 9 143 123 269 6.20e-26 104
MS.gene021062.t1 AT3G09370 47.059 102 53 1 9 110 135 235 8.66e-26 105
MS.gene021062.t1 AT3G09370 39.000 100 59 2 9 107 83 181 6.03e-13 68.6
MS.gene021062.t1 AT3G09370 47.059 102 53 1 9 110 130 230 9.32e-26 105
MS.gene021062.t1 AT3G09370 39.000 100 59 2 9 107 78 176 6.65e-13 68.2
MS.gene021062.t1 AT5G02320 47.059 102 53 1 9 110 127 227 1.22e-25 105
MS.gene021062.t1 AT5G02320 36.000 100 62 2 9 107 75 173 7.88e-12 65.1
MS.gene021062.t1 AT5G02320 47.059 102 53 1 9 110 127 227 1.22e-25 105
MS.gene021062.t1 AT5G02320 36.000 100 62 2 9 107 75 173 7.88e-12 65.1
MS.gene021062.t1 AT3G09370 47.059 102 53 1 9 110 143 243 1.41e-25 105
MS.gene021062.t1 AT3G09370 39.000 100 59 2 9 107 91 189 7.13e-13 68.2
MS.gene021062.t1 AT1G26780 47.573 103 51 2 9 110 98 198 2.03e-25 101
MS.gene021062.t1 AT5G02320 47.059 102 53 1 9 110 67 167 2.18e-25 104
MS.gene021062.t1 AT5G02320 36.000 100 62 2 9 107 15 113 1.20e-11 64.7
MS.gene021062.t1 AT5G17800 38.686 137 79 3 2 134 86 221 2.20e-25 102
MS.gene021062.t1 AT1G26780 47.573 103 51 2 9 110 98 198 2.52e-25 102
MS.gene021062.t1 AT3G27785 44.444 108 59 1 9 116 189 295 3.04e-25 103
MS.gene021062.t1 AT3G50060 44.118 102 56 1 9 110 6 106 3.07e-25 101
MS.gene021062.t1 AT4G18770 43.590 117 62 2 9 122 217 332 4.83e-25 102
MS.gene021062.t1 AT5G58850 41.129 124 69 3 9 131 105 225 1.16e-24 102
MS.gene021062.t1 AT5G11050 40.833 120 68 2 9 127 105 222 1.19e-24 101
MS.gene021062.t1 AT5G67300 44.118 102 56 1 9 110 6 106 1.74e-24 99.8
MS.gene021062.t1 AT2G23290 46.078 102 54 1 9 110 13 113 1.93e-24 99.8
MS.gene021062.t1 AT1G17950 47.788 113 55 3 9 120 5 114 3.69e-24 97.4
MS.gene021062.t1 AT4G37260 43.396 106 59 1 9 114 13 117 1.17e-23 97.8
MS.gene021062.t1 AT5G11510 41.176 102 59 1 9 110 81 181 1.06e-22 97.4
MS.gene021062.t1 AT5G11510 35.294 102 64 2 7 107 27 127 2.66e-12 66.6
MS.gene021062.t1 AT5G11510 41.176 102 59 1 9 110 81 181 1.06e-22 97.4
MS.gene021062.t1 AT5G11510 35.294 102 64 2 7 107 27 127 2.66e-12 66.6
MS.gene021062.t1 AT5G11510 41.176 102 59 1 9 110 81 181 1.06e-22 97.4
MS.gene021062.t1 AT5G11510 35.294 102 64 2 7 107 27 127 2.66e-12 66.6
MS.gene021062.t1 AT5G11510 41.176 102 59 1 9 110 81 181 1.23e-22 97.1
MS.gene021062.t1 AT5G11510 35.294 102 64 2 7 107 27 127 2.52e-12 66.6
MS.gene021062.t1 AT5G11510 41.176 102 59 1 9 110 81 181 1.26e-22 97.1
MS.gene021062.t1 AT5G11510 35.294 102 64 2 7 107 27 127 2.41e-12 67.0
MS.gene021062.t1 AT4G33450 39.130 138 76 3 8 138 18 154 1.31e-22 93.6
MS.gene021062.t1 AT1G66380 59.211 76 31 0 35 110 3 78 5.26e-22 87.8
MS.gene021062.t1 AT1G73410 46.789 109 55 2 9 116 6 112 5.30e-22 91.7
MS.gene021062.t1 AT3G29020 34.483 145 81 3 4 145 57 190 1.06e-21 90.5
MS.gene021062.t1 AT1G73410 46.789 109 55 2 9 116 6 112 1.31e-21 89.7
MS.gene021062.t1 AT3G29020 34.483 145 81 3 4 145 59 192 1.58e-21 91.7
MS.gene021062.t1 AT5G40360 38.261 115 70 1 4 118 153 266 2.10e-21 92.0
MS.gene021062.t1 AT1G22640 65.517 58 20 0 53 110 1 58 2.18e-21 89.0
MS.gene021062.t1 AT5G14750 62.069 58 22 0 53 110 1 58 2.28e-21 87.4
MS.gene021062.t1 AT5G14750 62.069 58 22 0 53 110 1 58 2.28e-21 87.4
MS.gene021062.t1 AT2G25230 40.541 111 63 2 9 119 26 133 2.67e-21 89.7
MS.gene021062.t1 AT3G23250 55.556 72 31 1 53 124 1 71 8.84e-21 88.2
MS.gene021062.t1 AT4G32730 38.835 103 60 2 9 110 87 187 1.86e-20 90.9
MS.gene021062.t1 AT4G32730 33.333 102 66 2 7 107 33 133 1.31e-11 64.7
MS.gene021062.t1 AT4G32730 38.835 103 60 2 9 110 87 187 1.90e-20 90.9
MS.gene021062.t1 AT4G32730 33.333 102 66 2 7 107 33 133 1.55e-11 64.7
MS.gene021062.t1 AT4G32730 38.835 103 60 2 9 110 87 187 1.90e-20 90.9
MS.gene021062.t1 AT4G32730 33.333 102 66 2 7 107 33 133 1.55e-11 64.7
MS.gene021062.t1 AT4G32730 38.835 103 60 2 9 110 87 187 1.90e-20 90.9
MS.gene021062.t1 AT4G32730 33.333 102 66 2 7 107 33 133 1.55e-11 64.7
MS.gene021062.t1 AT4G32730 38.835 103 60 2 9 110 87 187 1.90e-20 90.9
MS.gene021062.t1 AT4G32730 33.333 102 66 2 7 107 33 133 1.55e-11 64.7
MS.gene021062.t1 AT5G39700 34.400 125 81 1 8 132 55 178 3.28e-19 83.2
MS.gene021062.t1 AT2G37630 38.679 106 63 1 12 115 7 112 5.19e-19 85.5
MS.gene021062.t1 AT2G02820 41.121 107 61 2 12 118 33 137 3.48e-18 83.6
MS.gene021062.t1 AT2G02820 41.121 107 61 2 12 118 33 137 3.90e-18 83.6
MS.gene021062.t1 AT2G02820 41.121 107 61 2 12 118 33 137 5.34e-18 82.4
MS.gene021062.t1 AT1G14350 41.176 102 58 2 12 113 28 127 7.68e-18 82.8
MS.gene021062.t1 AT1G14350 41.176 102 58 2 12 113 28 127 7.68e-18 82.8
MS.gene021062.t1 AT1G71030 49.231 65 33 0 46 110 5 69 4.89e-17 77.0
MS.gene021062.t1 AT1G18960 37.143 105 63 2 9 113 10 111 6.23e-17 79.0
MS.gene021062.t1 AT1G71030 49.231 65 33 0 46 110 19 83 7.43e-17 76.6
MS.gene021062.t1 AT5G40430 37.838 111 65 3 9 119 54 160 3.40e-16 76.3
MS.gene021062.t1 AT4G00540 39.091 110 61 4 8 113 102 209 2.80e-15 75.1
MS.gene021062.t1 AT1G66380 45.000 80 44 0 8 87 9 88 4.55e-15 69.7
MS.gene021062.t1 AT4G00540 39.091 110 61 4 8 113 100 207 4.60e-15 74.7
MS.gene021062.t1 AT3G18100 38.384 99 58 2 7 104 544 640 4.09e-14 72.0
MS.gene021062.t1 AT3G18100 38.384 99 58 2 7 104 383 479 4.35e-14 72.0
MS.gene021062.t1 AT3G18100 38.384 99 58 2 7 104 496 592 4.99e-14 72.0
MS.gene021062.t1 AT3G18100 38.384 99 58 2 7 104 331 427 5.40e-14 71.6
MS.gene021062.t1 AT4G25560 56.522 46 20 0 65 110 2 47 1.85e-13 67.8
MS.gene021062.t1 AT1G14350 40.230 87 37 2 27 113 13 84 1.47e-12 67.0
MS.gene021062.t1 AT1G14350 40.230 87 37 2 27 113 13 84 1.47e-12 67.0

Find 53 sgRNAs with CRISPR-Local

Find 109 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATGGAACTTCACTCTAAA+TGG 0.146424 4.3:+40550058 MS.gene021062:CDS
AGTACCCTTGTTCAATTTCT+TGG 0.198476 4.3:-40550943 None:intergenic
CATAACAAGTGTTTCTTCTT+GGG 0.234566 4.3:-40550040 None:intergenic
GGTACTCAATGGATGATATA+TGG 0.252471 4.3:+40550960 MS.gene021062:CDS
TTCACTCTAAATGGGGAAAT+AGG 0.260240 4.3:+40550067 MS.gene021062:CDS
GATGATGTTGAAGGCATTAT+AGG 0.278875 4.3:-40551073 None:intergenic
CCATAACAAGTGTTTCTTCT+TGG 0.289211 4.3:-40550041 None:intergenic
GGTTATTTGGTGATCGTAGA+TGG 0.292214 4.3:+40549797 MS.gene021062:CDS
ATCTCATTGTCTGTTCTTCC+TGG 0.294103 4.3:-40550734 None:intergenic
GTAGATCAGGTAAGAGTTGC+AGG 0.324383 4.3:+40549965 MS.gene021062:CDS
ATCTTGCCACGTTTGAGATC+AGG 0.342275 4.3:-40550012 None:intergenic
CAAGGGAACACATTTCTAAC+TGG 0.364614 4.3:+40551199 MS.gene021062:CDS
ACAATGAGATTAAGAATTAC+TGG 0.365207 4.3:+40550747 MS.gene021062:CDS
GTTCCCTTGTTGATCATAGA+AGG 0.376985 4.3:-40551185 None:intergenic
CTTGTTCAATTTCTTGGACT+TGG 0.379831 4.3:-40550937 None:intergenic
TATGGAACTTCACTCTAAAT+GGG 0.390577 4.3:+40550059 MS.gene021062:CDS
CAACTAGAAGATTGATGATC+AGG 0.393403 4.3:-40550836 None:intergenic
AGAACAAGAAGATTACAAAT+TGG 0.394597 4.3:+40549762 MS.gene021062:CDS
TAATCTTCTTGTTCTGTCCA+TGG 0.396833 4.3:-40549754 None:intergenic
GTTGTAGGTTTGAGTAGATC+AGG 0.410818 4.3:+40549952 MS.gene021062:intron
TTCTTCTTCAGACTCTTTGT+TGG 0.419812 4.3:-40550909 None:intergenic
CCAAGAAGAAACACTTGTTA+TGG 0.427820 4.3:+40550041 MS.gene021062:CDS
AAGATGTTATTCCCTCCTAT+TGG 0.427899 4.3:+40551148 MS.gene021062:CDS
TTCATATTTAGATCCATTGT+GGG 0.445170 4.3:+40551105 MS.gene021062:CDS
TCACAAGAAATAAGCAGAAA+AGG 0.460369 4.3:+40549730 MS.gene021062:CDS
TAAGAGTTGCAGGTTACGTT+GGG 0.469904 4.3:+40549975 MS.gene021062:CDS
ATAACAAGTGTTTCTTCTTG+GGG 0.472612 4.3:-40550039 None:intergenic
GTTATTTGGTGATCGTAGAT+GGG 0.492828 4.3:+40549798 MS.gene021062:CDS
GTACTCAATGGATGATATAT+GGG 0.501833 4.3:+40550961 MS.gene021062:CDS
TCTTGCCACGTTTGAGATCA+GGG 0.506211 4.3:-40550011 None:intergenic
TTTAGATCCATTGTGGGTGA+TGG 0.511419 4.3:+40551111 MS.gene021062:CDS
TAATGCCTTCAACATCATCA+TGG 0.520242 4.3:+40551077 MS.gene021062:CDS
ATTCATATTTAGATCCATTG+TGG 0.525981 4.3:+40551104 MS.gene021062:CDS
AATTGAACAAGGGTACTCAA+TGG 0.554035 4.3:+40550949 MS.gene021062:CDS
AAATATTGGTCACCAATAGG+AGG 0.555227 4.3:-40551160 None:intergenic
TAATCCCATGATGATGTTGA+AGG 0.556115 4.3:-40551082 None:intergenic
AAATAAGCAGAAAAGGTCCA+TGG 0.566374 4.3:+40549737 MS.gene021062:CDS
CAAGTCCAAGAAATTGAACA+AGG 0.573106 4.3:+40550938 MS.gene021062:CDS
GTAAGAGTTGCAGGTTACGT+TGG 0.576254 4.3:+40549974 MS.gene021062:CDS
TCTTCATCCATCACCCACAA+TGG 0.577626 4.3:-40551118 None:intergenic
AATGCCTTCAACATCATCAT+GGG 0.583132 4.3:+40551078 MS.gene021062:CDS
TTTCCTTCTATGATCAACAA+GGG 0.589914 4.3:+40551182 MS.gene021062:CDS
AATATTGGTCACCAATAGGA+GGG 0.618360 4.3:-40551159 None:intergenic
CTCGAATAGTAACCATGGTG+TGG 0.619507 4.3:+40550874 MS.gene021062:CDS
AGAATTGCGAGAAGACTACC+AGG 0.634342 4.3:+40550716 MS.gene021062:CDS
ATGGAACTTCACTCTAAATG+GGG 0.635977 4.3:+40550060 MS.gene021062:CDS
CATTTCTCGAATAGTAACCA+TGG 0.637543 4.3:+40550869 MS.gene021062:CDS
GTTACTATTCGAGAAATGTG+AGG 0.643697 4.3:-40550864 None:intergenic
CTTCACCCTGATCTCAAACG+TGG 0.676208 4.3:+40550006 MS.gene021062:CDS
TCAGGTGACGATGAAATCGA+AGG 0.678422 4.3:-40550818 None:intergenic
AAGTCCAAGAAATTGAACAA+GGG 0.687184 4.3:+40550939 MS.gene021062:CDS
ATGAGATTAAGAATTACTGG+AGG 0.710072 4.3:+40550750 MS.gene021062:CDS
AAGCATGTGATTCCACACCA+TGG 0.726235 4.3:-40550886 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAATTCTTGAATAGATT+TGG + chr4.3:40550634-40550653 MS.gene021062:intron 15.0%
!! AATAAATAGGTATGCTTATA+AGG + chr4.3:40549865-40549884 MS.gene021062:intron 20.0%
!! ATAAATAGGTATGCTTATAA+GGG + chr4.3:40549866-40549885 MS.gene021062:intron 20.0%
!! TATAAATCTAATAGTCCTTA+CGG - chr4.3:40550429-40550448 None:intergenic 20.0%
!! TTCTATATAGCTGTATTATA+CGG - chr4.3:40550350-40550369 None:intergenic 20.0%
! ACAATGAGATTAAGAATTAC+TGG + chr4.3:40550747-40550766 MS.gene021062:CDS 25.0%
! AGAACAAGAAGATTACAAAT+TGG + chr4.3:40549762-40549781 MS.gene021062:CDS 25.0%
! ATTCATATTTAGATCCATTG+TGG + chr4.3:40551104-40551123 MS.gene021062:CDS 25.0%
! GATCATAGAAGGAAAAATAT+TGG - chr4.3:40551177-40551196 None:intergenic 25.0%
! TAAAAGACATGAGATGTATT+TGG - chr4.3:40550162-40550181 None:intergenic 25.0%
! TGTATTTGGATATATGAAGT+AGG - chr4.3:40550148-40550167 None:intergenic 25.0%
! TTCATATTTAGATCCATTGT+GGG + chr4.3:40551105-40551124 MS.gene021062:CDS 25.0%
!! ACAAATTGGCATATTTTGTA+GGG + chr4.3:40549776-40549795 MS.gene021062:CDS 25.0%
!! ATCTCATGTCTTTTAAATTG+CGG + chr4.3:40550167-40550186 MS.gene021062:intron 25.0%
!! TACAAATTGGCATATTTTGT+AGG + chr4.3:40549775-40549794 MS.gene021062:CDS 25.0%
AACAGAAAAACCATGGTTAA+AGG - chr4.3:40549921-40549940 None:intergenic 30.0%
AAGTCCAAGAAATTGAACAA+GGG + chr4.3:40550939-40550958 MS.gene021062:CDS 30.0%
AGCATTAATTCCTTTAACCA+TGG + chr4.3:40549908-40549927 MS.gene021062:intron 30.0%
ATAACAAGTGTTTCTTCTTG+GGG - chr4.3:40550042-40550061 None:intergenic 30.0%
ATGAGATTAAGAATTACTGG+AGG + chr4.3:40550750-40550769 MS.gene021062:CDS 30.0%
CATAACAAGTGTTTCTTCTT+GGG - chr4.3:40550043-40550062 None:intergenic 30.0%
CCTGGTCAAATATATGAAAT+GGG + chr4.3:40550373-40550392 MS.gene021062:intron 30.0%
GAAAAATATTGGTCACCAAT+AGG - chr4.3:40551166-40551185 None:intergenic 30.0%
GTACTCAATGGATGATATAT+GGG + chr4.3:40550961-40550980 MS.gene021062:CDS 30.0%
TATGGAACTTCACTCTAAAT+GGG + chr4.3:40550059-40550078 MS.gene021062:CDS 30.0%
TCACAAGAAATAAGCAGAAA+AGG + chr4.3:40549730-40549749 MS.gene021062:CDS 30.0%
TCCTGGTCAAATATATGAAA+TGG + chr4.3:40550372-40550391 MS.gene021062:intron 30.0%
TTATGGAACTTCACTCTAAA+TGG + chr4.3:40550058-40550077 MS.gene021062:CDS 30.0%
TTTCCTTCTATGATCAACAA+GGG + chr4.3:40551182-40551201 MS.gene021062:CDS 30.0%
! AAATTGGATTGGATTCTCTA+AGG + chr4.3:40550234-40550253 MS.gene021062:intron 30.0%
! AATATGGTGCTGAAACAATA+AGG + chr4.3:40550261-40550280 MS.gene021062:intron 30.0%
! GATTTTATAGCAAAGGTTTC+AGG + chr4.3:40549820-40549839 MS.gene021062:CDS 30.0%
! GCATATTTTGTAGGGTTATT+TGG + chr4.3:40549784-40549803 MS.gene021062:CDS 30.0%
! TAGATGGGATTTTATAGCAA+AGG + chr4.3:40549813-40549832 MS.gene021062:CDS 30.0%
! TTTTCCTTCTATGATCAACA+AGG + chr4.3:40551181-40551200 MS.gene021062:CDS 30.0%
!! AAAAGTATTCTTGAGAGCTA+CGG + chr4.3:40550205-40550224 MS.gene021062:intron 30.0%
AAATAAGCAGAAAAGGTCCA+TGG + chr4.3:40549737-40549756 MS.gene021062:CDS 35.0%
AAATATTGGTCACCAATAGG+AGG - chr4.3:40551163-40551182 None:intergenic 35.0%
AAGATGTTATTCCCTCCTAT+TGG + chr4.3:40551148-40551167 MS.gene021062:CDS 35.0%
AATATTGGTCACCAATAGGA+GGG - chr4.3:40551162-40551181 None:intergenic 35.0%
AATGCCTTCAACATCATCAT+GGG + chr4.3:40551078-40551097 MS.gene021062:CDS 35.0%
AGTACCCTTGTTCAATTTCT+TGG - chr4.3:40550946-40550965 None:intergenic 35.0%
ATGGAACTTCACTCTAAATG+GGG + chr4.3:40550060-40550079 MS.gene021062:CDS 35.0%
CAAGTCCAAGAAATTGAACA+AGG + chr4.3:40550938-40550957 MS.gene021062:CDS 35.0%
CATTTCTCGAATAGTAACCA+TGG + chr4.3:40550869-40550888 MS.gene021062:CDS 35.0%
CCATAACAAGTGTTTCTTCT+TGG - chr4.3:40550044-40550063 None:intergenic 35.0%
CCCATTTCATATATTTGACC+AGG - chr4.3:40550376-40550395 None:intergenic 35.0%
CTTGTTCAATTTCTTGGACT+TGG - chr4.3:40550940-40550959 None:intergenic 35.0%
GACACACATGAGAAAAAAGA+GGG + chr4.3:40550772-40550791 MS.gene021062:CDS 35.0%
GCAAGGACTTGAATTATCTA+CGG - chr4.3:40550496-40550515 None:intergenic 35.0%
GGATATATGAAGTAGGTAGT+AGG - chr4.3:40550141-40550160 None:intergenic 35.0%
GGTACTCAATGGATGATATA+TGG + chr4.3:40550960-40550979 MS.gene021062:CDS 35.0%
GTAGGTAGTAGGAAAAGAAA+AGG - chr4.3:40550130-40550149 None:intergenic 35.0%
GTTACTATTCGAGAAATGTG+AGG - chr4.3:40550867-40550886 None:intergenic 35.0%
TAATCTTCTTGTTCTGTCCA+TGG - chr4.3:40549757-40549776 None:intergenic 35.0%
TAATGCCTTCAACATCATCA+TGG + chr4.3:40551077-40551096 MS.gene021062:CDS 35.0%
TACAGCTATATAGAAGATCC+TGG + chr4.3:40550355-40550374 MS.gene021062:intron 35.0%
TACGGTCAAAGAAATTGGAT+TGG + chr4.3:40550223-40550242 MS.gene021062:intron 35.0%
TCACTAGTTCCATCAAAAAC+AGG - chr4.3:40551028-40551047 None:intergenic 35.0%
TCGCAGTGACATAAAAATTG+CGG + chr4.3:40550565-40550584 MS.gene021062:intron 35.0%
TGTGAGAAACAGAAAAACCA+TGG - chr4.3:40549928-40549947 None:intergenic 35.0%
TTCACTCTAAATGGGGAAAT+AGG + chr4.3:40550067-40550086 MS.gene021062:CDS 35.0%
TTCTTCTTCAGACTCTTTGT+TGG - chr4.3:40550912-40550931 None:intergenic 35.0%
! CAACTAGAAGATTGATGATC+AGG - chr4.3:40550839-40550858 None:intergenic 35.0%
! CCAAGAAGAAACACTTGTTA+TGG + chr4.3:40550041-40550060 MS.gene021062:CDS 35.0%
! GTTATTTGGTGATCGTAGAT+GGG + chr4.3:40549798-40549817 MS.gene021062:CDS 35.0%
! TAATCCCATGATGATGTTGA+AGG - chr4.3:40551085-40551104 None:intergenic 35.0%
! TGTTTCTCACACTTTGTTGT+AGG + chr4.3:40549937-40549956 MS.gene021062:intron 35.0%
!! AATTGAACAAGGGTACTCAA+TGG + chr4.3:40550949-40550968 MS.gene021062:CDS 35.0%
!! GATGATGTTGAAGGCATTAT+AGG - chr4.3:40551076-40551095 None:intergenic 35.0%
!!! GTTCTTCAACCTGTTTTTGA+TGG + chr4.3:40551016-40551035 MS.gene021062:CDS 35.0%
AATTCAAGTCCTTGCTCAGA+TGG + chr4.3:40550501-40550520 MS.gene021062:intron 40.0%
ACTTGAATTATCTACGGCAG+CGG - chr4.3:40550490-40550509 None:intergenic 40.0%
AGAGCTACGGTCAAAGAAAT+TGG + chr4.3:40550218-40550237 MS.gene021062:intron 40.0%
ATCTCATTGTCTGTTCTTCC+TGG - chr4.3:40550737-40550756 None:intergenic 40.0%
ATTCAAGTCCTTGCTCAGAT+GGG + chr4.3:40550502-40550521 MS.gene021062:intron 40.0%
CAAGGGAACACATTTCTAAC+TGG + chr4.3:40551199-40551218 MS.gene021062:CDS 40.0%
GCACTATACTGCAATTGTAG+AGG - chr4.3:40550401-40550420 None:intergenic 40.0%
GGACACACATGAGAAAAAAG+AGG + chr4.3:40550771-40550790 MS.gene021062:CDS 40.0%
GTTCCCTTGTTGATCATAGA+AGG - chr4.3:40551188-40551207 None:intergenic 40.0%
GTTGTAGGTTTGAGTAGATC+AGG + chr4.3:40549952-40549971 MS.gene021062:intron 40.0%
TAAGAGTTGCAGGTTACGTT+GGG + chr4.3:40549975-40549994 MS.gene021062:CDS 40.0%
TGATGAACAAGATTGCGTTG+TGG + chr4.3:40550534-40550553 MS.gene021062:intron 40.0%
TTTAGATCCATTGTGGGTGA+TGG + chr4.3:40551111-40551130 MS.gene021062:CDS 40.0%
! GGTTATTTGGTGATCGTAGA+TGG + chr4.3:40549797-40549816 MS.gene021062:CDS 40.0%
!! AAAGGTTTCAGGTTTGAAGG+TGG + chr4.3:40549831-40549850 MS.gene021062:intron 40.0%
!! AGCAAAGGTTTCAGGTTTGA+AGG + chr4.3:40549828-40549847 MS.gene021062:intron 40.0%
!! GATTCTCTAAGGCTGCAATA+TGG + chr4.3:40550245-40550264 MS.gene021062:intron 40.0%
AAGCATGTGATTCCACACCA+TGG - chr4.3:40550889-40550908 None:intergenic 45.0%
AGAATTGCGAGAAGACTACC+AGG + chr4.3:40550716-40550735 MS.gene021062:CDS 45.0%
AGCTGTGTGATGATTGCAGA+TGG + chr4.3:40550690-40550709 MS.gene021062:intron 45.0%
CTCGAATAGTAACCATGGTG+TGG + chr4.3:40550874-40550893 MS.gene021062:CDS 45.0%
GGCGGGAGAGAGTAATAAAT+AGG + chr4.3:40549852-40549871 MS.gene021062:intron 45.0%
GTAAGAGTTGCAGGTTACGT+TGG + chr4.3:40549974-40549993 MS.gene021062:CDS 45.0%
GTAGATCAGGTAAGAGTTGC+AGG + chr4.3:40549965-40549984 MS.gene021062:CDS 45.0%
TCAGGTGACGATGAAATCGA+AGG - chr4.3:40550821-40550840 None:intergenic 45.0%
TCTTCATCCATCACCCACAA+TGG - chr4.3:40551121-40551140 None:intergenic 45.0%
TTGCGGTGTCTGATCTAGTT+TGG + chr4.3:40550582-40550601 MS.gene021062:intron 45.0%
TTTATGTCACTGCGACTCAG+AGG - chr4.3:40550560-40550579 None:intergenic 45.0%
! ATCTTGCCACGTTTGAGATC+AGG - chr4.3:40550015-40550034 None:intergenic 45.0%
! TCTTGCCACGTTTGAGATCA+GGG - chr4.3:40550014-40550033 None:intergenic 45.0%
!! TATACGGTGCTGCAACTGTA+GGG - chr4.3:40550334-40550353 None:intergenic 45.0%
!! TTATACGGTGCTGCAACTGT+AGG - chr4.3:40550335-40550354 None:intergenic 45.0%
!!! AATTTTTATAAAAATACAAA+AGG - chr4.3:40550622-40550641 None:intergenic 5.0%
AGTATAGTGCTGCAGCCGTA+AGG + chr4.3:40550411-40550430 MS.gene021062:intron 50.0%
CTTCACCCTGATCTCAAACG+TGG + chr4.3:40550006-40550025 MS.gene021062:CDS 50.0%
!! GGTTTCAGGTTTGAAGGTGG+CGG + chr4.3:40549834-40549853 MS.gene021062:intron 50.0%
!! GTTTCAGGTTTGAAGGTGGC+GGG + chr4.3:40549835-40549854 MS.gene021062:intron 50.0%
TGCATCAGCCCATCTGAGCA+AGG - chr4.3:40550513-40550532 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 40549724 40551225 40549724 ID=MS.gene021062
chr4.3 mRNA 40549724 40551225 40549724 ID=MS.gene021062.t1;Parent=MS.gene021062
chr4.3 exon 40549724 40549841 40549724 ID=MS.gene021062.t1.exon1;Parent=MS.gene021062.t1
chr4.3 CDS 40549724 40549841 40549724 ID=cds.MS.gene021062.t1;Parent=MS.gene021062.t1
chr4.3 exon 40549959 40550088 40549959 ID=MS.gene021062.t1.exon2;Parent=MS.gene021062.t1
chr4.3 CDS 40549959 40550088 40549959 ID=cds.MS.gene021062.t1;Parent=MS.gene021062.t1
chr4.3 exon 40550709 40551225 40550709 ID=MS.gene021062.t1.exon3;Parent=MS.gene021062.t1
chr4.3 CDS 40550709 40551225 40550709 ID=cds.MS.gene021062.t1;Parent=MS.gene021062.t1
Gene Sequence

>MS.gene021062

ATGGTTTCACAAGAAATAAGCAGAAAAGGTCCATGGACAGAACAAGAAGATTACAAATTGGCATATTTTGTAGGGTTATTTGGTGATCGTAGATGGGATTTTATAGCAAAGGTTTCAGGTTTGAAGGTGGCGGGAGAGAGTAATAAATAGGTATGCTTATAAGGGCATGCTGAATTATAATAGAAGCATTAATTCCTTTAACCATGGTTTTTCTGTTTCTCACACTTTGTTGTAGGTTTGAGTAGATCAGGTAAGAGTTGCAGGTTACGTTGGGTTAATTATCTTCACCCTGATCTCAAACGTGGCAAGATGACACCCCAAGAAGAAACACTTGTTATGGAACTTCACTCTAAATGGGGAAATAGGTTTGAGACTGAATATTATCAAGCAGACTCACTATTTTCCTTTTCTTTTCCTACTACCTACTTCATATATCCAAATACATCTCATGTCTTTTAAATTGCGGTCGCGCTGCAATCATAAAAGTATTCTTGAGAGCTACGGTCAAAGAAATTGGATTGGATTCTCTAAGGCTGCAATATGGTGCTGAAACAATAAGGACTGTTAGATTTACAGAGAAATTTTTTTTCTCTCAAAATCTAATAGTCCCTACAGTTGCAGCACCGTATAATACAGCTATATAGAAGATCCTGGTCAAATATATGAAATGGGATCCTCTACAATTGCAGTATAGTGCTGCAGCCGTAAGGACTATTAGATTTATAGAGAAAATTTATCTCTCTAAATCTAATAGTCTCTACTACCGCTGCCGTAGATAATTCAAGTCCTTGCTCAGATGGGCTGATGCAGTGATGAACAAGATTGCGTTGTGGCCTCTGAGTCGCAGTGACATAAAAATTGCGGTGTCTGATCTAGTTTGGCATCGCATACTTTTCCTTTTGTATTTTTATAAAAATTCTTGAATAGATTTGGTTTTGAATTTTTTTGTTTACTCAAGTTTAATATAGCTGTGTGATGATTGCAGATGGTCAAGAATTGCGAGAAGACTACCAGGAAGAACAGACAATGAGATTAAGAATTACTGGAGGACACACATGAGAAAAAAGAGGGCACAAGAGAAAAAACATGCAACACCTTCGATTTCATCGTCACCTGATCATCAATCTTCTAGTTGTCAATCCTCACATTTCTCGAATAGTAACCATGGTGTGGAATCACATGCTTCCAACAAAGAGTCTGAAGAAGAAAATTACCAAGTCCAAGAAATTGAACAAGGGTACTCAATGGATGATATATGGGAAGATATTGCTATGTCTGAAGATGACATCAATGTTCTTCAACCTGTTTTTGATGGAACTAGTGAAGAGAATAGCAATAACTTTTCTTGTCCTATAATGCCTTCAACATCATCATGGGATTATTCATATTTAGATCCATTGTGGGTGATGGATGAAGAAGAAAGCAAGATGTTATTCCCTCCTATTGGTGACCAATATTTTTCCTTCTATGATCAACAAGGGAACACATTTCTAACTGGTTAA
Protein sequence

>MS.gene021062.t1

MVSQEISRKGPWTEQEDYKLAYFVGLFGDRRWDFIAKVSGLSRSGKSCRLRWVNYLHPDLKRGKMTPQEETLVMELHSKWGNRWSRIARRLPGRTDNEIKNYWRTHMRKKRAQEKKHATPSISSSPDHQSSSCQSSHFSNSNHGVESHASNKESEEENYQVQEIEQGYSMDDIWEDIAMSEDDINVLQPVFDGTSEENSNNFSCPIMPSTSSWDYSYLDPLWVMDEEESKMLFPPIGDQYFSFYDQQGNTFLTG