Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene021137.t1 | XP_003606667.1 | 90.1 | 637 | 54 | 2 | 1 | 637 | 1 | 628 | 0.00E+00 | 1128.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene021137.t1 | Q9XE58 | 45.9 | 691 | 286 | 14 | 31 | 637 | 81 | 767 | 9.5e-142 | 505.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene021137.t1 | G7JUT4 | 90.1 | 637 | 54 | 2 | 1 | 637 | 1 | 628 | 0.0e+00 | 1128.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene021137.t1 | TF | GRAS |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene021137.t1 | MTR_4g064120 | 94.505 | 637 | 26 | 2 | 1 | 637 | 1 | 628 | 0.0 | 1217 |
MS.gene021137.t1 | MTR_4g064180 | 92.936 | 637 | 36 | 2 | 1 | 637 | 1 | 628 | 0.0 | 1197 |
MS.gene021137.t1 | MTR_4g064150 | 72.289 | 664 | 143 | 8 | 14 | 637 | 73 | 735 | 0.0 | 937 |
MS.gene021137.t1 | MTR_2g097410 | 54.781 | 732 | 220 | 13 | 2 | 637 | 27 | 743 | 0.0 | 758 |
MS.gene021137.t1 | MTR_4g064160 | 48.048 | 666 | 289 | 11 | 24 | 637 | 26 | 686 | 0.0 | 590 |
MS.gene021137.t1 | MTR_7g062120 | 43.485 | 683 | 309 | 15 | 26 | 637 | 66 | 742 | 0.0 | 536 |
MS.gene021137.t1 | MTR_2g097467 | 45.483 | 631 | 305 | 17 | 27 | 637 | 45 | 656 | 3.99e-174 | 510 |
MS.gene021137.t1 | MTR_2g097473 | 45.227 | 639 | 295 | 15 | 27 | 637 | 45 | 656 | 5.73e-173 | 508 |
MS.gene021137.t1 | MTR_4g064200 | 54.113 | 462 | 183 | 6 | 197 | 637 | 199 | 652 | 5.71e-172 | 505 |
MS.gene021137.t1 | MTR_2g097463 | 44.921 | 630 | 292 | 14 | 36 | 637 | 55 | 657 | 1.51e-168 | 496 |
MS.gene021137.t1 | MTR_2g097310 | 49.007 | 453 | 210 | 8 | 195 | 637 | 199 | 640 | 7.18e-152 | 453 |
MS.gene021137.t1 | MTR_2g097390 | 40.924 | 628 | 313 | 16 | 33 | 637 | 51 | 643 | 5.65e-150 | 448 |
MS.gene021137.t1 | MTR_2g097350 | 47.566 | 452 | 221 | 7 | 194 | 637 | 199 | 642 | 1.30e-145 | 437 |
MS.gene021137.t1 | MTR_2g097380 | 44.714 | 454 | 187 | 8 | 194 | 637 | 164 | 563 | 1.32e-128 | 390 |
MS.gene021137.t1 | MTR_2g082090 | 33.777 | 376 | 244 | 3 | 259 | 634 | 208 | 578 | 1.66e-68 | 234 |
MS.gene021137.t1 | MTR_5g097480 | 32.181 | 376 | 250 | 3 | 259 | 634 | 173 | 543 | 1.87e-63 | 219 |
MS.gene021137.t1 | MTR_4g133660 | 31.579 | 380 | 252 | 6 | 258 | 635 | 170 | 543 | 4.42e-62 | 216 |
MS.gene021137.t1 | MTR_7g027190 | 32.250 | 400 | 234 | 5 | 254 | 634 | 291 | 672 | 2.60e-60 | 213 |
MS.gene021137.t1 | MTR_3g056110 | 31.649 | 376 | 252 | 3 | 259 | 634 | 171 | 541 | 3.94e-60 | 210 |
MS.gene021137.t1 | MTR_2g026250 | 28.571 | 378 | 264 | 4 | 258 | 634 | 223 | 595 | 1.49e-57 | 204 |
MS.gene021137.t1 | MTR_1g029420 | 29.412 | 374 | 259 | 3 | 261 | 634 | 223 | 591 | 3.62e-57 | 203 |
MS.gene021137.t1 | MTR_5g094450 | 31.579 | 380 | 251 | 7 | 259 | 634 | 157 | 531 | 4.32e-57 | 202 |
MS.gene021137.t1 | MTR_3g089055 | 29.412 | 374 | 259 | 3 | 261 | 634 | 201 | 569 | 7.67e-56 | 199 |
MS.gene021137.t1 | MTR_3g089055 | 29.412 | 374 | 259 | 3 | 261 | 634 | 196 | 564 | 8.92e-56 | 199 |
MS.gene021137.t1 | MTR_4g104020 | 30.000 | 390 | 242 | 8 | 260 | 634 | 146 | 519 | 2.28e-54 | 194 |
MS.gene021137.t1 | MTR_3g065980 | 31.144 | 411 | 251 | 8 | 238 | 634 | 147 | 539 | 4.24e-54 | 194 |
MS.gene021137.t1 | MTR_8g442410 | 31.407 | 398 | 241 | 9 | 255 | 637 | 147 | 527 | 1.23e-53 | 192 |
MS.gene021137.t1 | MTR_7g074650 | 30.270 | 370 | 240 | 7 | 267 | 636 | 442 | 793 | 1.15e-48 | 182 |
MS.gene021137.t1 | MTR_4g076140 | 26.258 | 457 | 268 | 6 | 238 | 634 | 21 | 468 | 7.28e-48 | 175 |
MS.gene021137.t1 | MTR_5g009080 | 26.292 | 445 | 260 | 6 | 249 | 634 | 42 | 477 | 9.29e-48 | 175 |
MS.gene021137.t1 | MTR_4g102790 | 27.990 | 393 | 259 | 10 | 255 | 636 | 284 | 663 | 8.96e-43 | 164 |
MS.gene021137.t1 | MTR_2g034260 | 28.678 | 401 | 252 | 10 | 252 | 634 | 199 | 583 | 8.43e-41 | 157 |
MS.gene021137.t1 | MTR_4g097080 | 27.720 | 386 | 257 | 10 | 261 | 636 | 131 | 504 | 1.82e-39 | 152 |
MS.gene021137.t1 | MTR_3g022830 | 24.941 | 421 | 255 | 7 | 264 | 634 | 26 | 435 | 6.06e-39 | 149 |
MS.gene021137.t1 | MTR_2g034250 | 26.914 | 405 | 255 | 8 | 252 | 634 | 199 | 584 | 6.24e-38 | 149 |
MS.gene021137.t1 | MTR_4g076020 | 26.685 | 371 | 245 | 6 | 267 | 637 | 88 | 431 | 1.15e-37 | 145 |
MS.gene021137.t1 | MTR_2g089100 | 27.027 | 407 | 258 | 9 | 260 | 637 | 49 | 445 | 1.26e-37 | 146 |
MS.gene021137.t1 | MTR_1g096030 | 29.500 | 400 | 239 | 13 | 260 | 634 | 77 | 458 | 1.52e-36 | 143 |
MS.gene021137.t1 | MTR_1g069725 | 25.581 | 387 | 256 | 11 | 255 | 634 | 101 | 462 | 6.72e-35 | 138 |
MS.gene021137.t1 | MTR_5g015490 | 27.083 | 384 | 266 | 8 | 262 | 636 | 113 | 491 | 1.62e-34 | 137 |
MS.gene021137.t1 | MTR_2g034280 | 26.076 | 395 | 268 | 9 | 252 | 634 | 192 | 574 | 3.33e-33 | 135 |
MS.gene021137.t1 | MTR_4g077760 | 26.966 | 356 | 242 | 8 | 283 | 634 | 213 | 554 | 3.80e-32 | 131 |
MS.gene021137.t1 | MTR_7g057230 | 25.949 | 316 | 220 | 6 | 326 | 635 | 350 | 657 | 4.71e-30 | 126 |
MS.gene021137.t1 | MTR_5g058860 | 26.355 | 406 | 253 | 12 | 256 | 635 | 112 | 497 | 2.61e-29 | 122 |
MS.gene021137.t1 | MTR_7g109580 | 25.641 | 390 | 269 | 9 | 252 | 634 | 178 | 553 | 1.19e-28 | 121 |
MS.gene021137.t1 | MTR_5g015950 | 22.642 | 424 | 275 | 10 | 260 | 637 | 32 | 448 | 1.64e-28 | 119 |
MS.gene021137.t1 | MTR_3g053270 | 22.642 | 424 | 275 | 10 | 260 | 637 | 32 | 448 | 1.64e-28 | 119 |
MS.gene021137.t1 | MTR_3g072710 | 24.155 | 414 | 274 | 12 | 246 | 635 | 103 | 500 | 2.72e-28 | 119 |
MS.gene021137.t1 | MTR_1g086970 | 25.124 | 402 | 263 | 13 | 252 | 634 | 95 | 477 | 1.17e-27 | 117 |
MS.gene021137.t1 | MTR_4g095500 | 24.107 | 448 | 289 | 12 | 235 | 637 | 29 | 470 | 3.39e-27 | 115 |
MS.gene021137.t1 | MTR_2g099110 | 25.378 | 331 | 227 | 8 | 235 | 561 | 50 | 364 | 9.85e-24 | 105 |
MS.gene021137.t1 | MTR_6g047750 | 23.209 | 349 | 244 | 7 | 295 | 634 | 328 | 661 | 2.22e-23 | 105 |
MS.gene021137.t1 | MTR_8g093070 | 25.253 | 396 | 245 | 16 | 260 | 637 | 136 | 498 | 1.54e-22 | 102 |
MS.gene021137.t1 | MTR_0092s0100 | 22.520 | 373 | 269 | 7 | 264 | 634 | 376 | 730 | 6.31e-18 | 88.6 |
MS.gene021137.t1 | MTR_0092s0100 | 22.520 | 373 | 269 | 7 | 264 | 634 | 373 | 727 | 7.16e-18 | 88.2 |
MS.gene021137.t1 | MTR_8g020840 | 25.500 | 400 | 247 | 15 | 263 | 634 | 171 | 547 | 3.72e-15 | 79.3 |
MS.gene021137.t1 | MTR_4g026485 | 21.932 | 383 | 258 | 9 | 264 | 634 | 270 | 623 | 2.38e-14 | 76.6 |
MS.gene021137.t1 | MTR_3g022580 | 29.730 | 111 | 77 | 1 | 524 | 634 | 73 | 182 | 9.05e-11 | 62.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene021137.t1 | AT1G07530 | 45.349 | 688 | 285 | 15 | 35 | 637 | 86 | 767 | 0.0 | 561 |
MS.gene021137.t1 | AT2G29060 | 47.544 | 631 | 281 | 15 | 29 | 636 | 53 | 656 | 0.0 | 556 |
MS.gene021137.t1 | AT2G29060 | 46.942 | 654 | 288 | 15 | 29 | 636 | 53 | 693 | 0.0 | 550 |
MS.gene021137.t1 | AT1G07520 | 47.528 | 627 | 303 | 9 | 36 | 637 | 70 | 695 | 0.0 | 535 |
MS.gene021137.t1 | AT1G07520 | 47.528 | 627 | 303 | 9 | 36 | 637 | 71 | 696 | 0.0 | 535 |
MS.gene021137.t1 | AT2G29065 | 45.997 | 637 | 265 | 12 | 36 | 637 | 38 | 630 | 0.0 | 533 |
MS.gene021137.t1 | AT1G07520 | 51.040 | 529 | 239 | 7 | 128 | 637 | 4 | 531 | 0.0 | 523 |
MS.gene021137.t1 | AT1G07520 | 51.040 | 529 | 239 | 7 | 128 | 637 | 4 | 531 | 0.0 | 523 |
MS.gene021137.t1 | AT2G37650 | 42.530 | 656 | 316 | 16 | 28 | 636 | 61 | 702 | 5.06e-163 | 484 |
MS.gene021137.t1 | AT2G37650 | 42.530 | 656 | 316 | 16 | 28 | 636 | 73 | 714 | 8.67e-163 | 484 |
MS.gene021137.t1 | AT5G59450 | 46.352 | 466 | 231 | 7 | 186 | 637 | 140 | 600 | 1.04e-146 | 439 |
MS.gene021137.t1 | AT3G46600 | 48.073 | 441 | 220 | 4 | 199 | 637 | 148 | 581 | 1.09e-146 | 437 |
MS.gene021137.t1 | AT3G46600 | 48.073 | 441 | 220 | 4 | 199 | 637 | 116 | 549 | 1.27e-146 | 436 |
MS.gene021137.t1 | AT3G46600 | 51.058 | 378 | 180 | 2 | 260 | 637 | 1 | 373 | 1.27e-139 | 412 |
MS.gene021137.t1 | AT1G50600 | 31.915 | 376 | 251 | 3 | 259 | 634 | 155 | 525 | 1.20e-60 | 211 |
MS.gene021137.t1 | AT5G48150 | 30.851 | 376 | 256 | 3 | 259 | 634 | 118 | 489 | 3.24e-60 | 209 |
MS.gene021137.t1 | AT5G48150 | 30.851 | 376 | 256 | 3 | 259 | 634 | 118 | 489 | 3.24e-60 | 209 |
MS.gene021137.t1 | AT5G48150 | 30.851 | 376 | 256 | 3 | 259 | 634 | 118 | 489 | 3.24e-60 | 209 |
MS.gene021137.t1 | AT5G48150 | 30.851 | 376 | 256 | 3 | 259 | 634 | 118 | 489 | 3.24e-60 | 209 |
MS.gene021137.t1 | AT2G04890 | 31.915 | 376 | 244 | 4 | 259 | 634 | 49 | 412 | 3.31e-60 | 207 |
MS.gene021137.t1 | AT1G50600 | 31.915 | 376 | 251 | 3 | 259 | 634 | 226 | 596 | 4.30e-60 | 211 |
MS.gene021137.t1 | AT1G50600 | 31.915 | 376 | 251 | 3 | 259 | 634 | 230 | 600 | 6.35e-60 | 211 |
MS.gene021137.t1 | AT1G21450 | 31.300 | 377 | 249 | 5 | 261 | 634 | 223 | 592 | 1.28e-56 | 202 |
MS.gene021137.t1 | AT1G66350 | 32.383 | 386 | 234 | 8 | 252 | 634 | 144 | 505 | 2.10e-55 | 196 |
MS.gene021137.t1 | AT4G17230 | 30.871 | 379 | 257 | 3 | 258 | 636 | 153 | 526 | 5.71e-52 | 187 |
MS.gene021137.t1 | AT4G17230 | 30.871 | 379 | 257 | 3 | 258 | 636 | 153 | 526 | 5.71e-52 | 187 |
MS.gene021137.t1 | AT1G14920 | 31.008 | 387 | 244 | 9 | 252 | 634 | 161 | 528 | 3.22e-50 | 183 |
MS.gene021137.t1 | AT3G03450 | 29.016 | 386 | 258 | 7 | 252 | 634 | 172 | 544 | 1.93e-49 | 181 |
MS.gene021137.t1 | AT2G01570 | 30.233 | 387 | 247 | 9 | 252 | 634 | 213 | 580 | 6.79e-49 | 180 |
MS.gene021137.t1 | AT3G54220 | 28.919 | 370 | 248 | 6 | 267 | 636 | 297 | 651 | 1.99e-48 | 180 |
MS.gene021137.t1 | AT1G50420 | 24.678 | 466 | 282 | 6 | 226 | 634 | 25 | 478 | 1.19e-47 | 174 |
MS.gene021137.t1 | AT5G17490 | 28.084 | 381 | 250 | 8 | 258 | 634 | 155 | 515 | 4.33e-43 | 162 |
MS.gene021137.t1 | AT5G41920 | 26.214 | 412 | 281 | 7 | 228 | 634 | 6 | 399 | 5.46e-42 | 157 |
MS.gene021137.t1 | AT5G66770 | 27.569 | 399 | 267 | 9 | 245 | 634 | 198 | 583 | 5.61e-42 | 160 |
MS.gene021137.t1 | AT1G63100 | 31.157 | 337 | 216 | 8 | 256 | 588 | 270 | 594 | 1.57e-36 | 145 |
MS.gene021137.t1 | AT1G63100 | 31.157 | 337 | 216 | 8 | 256 | 588 | 245 | 569 | 1.73e-36 | 145 |
MS.gene021137.t1 | AT4G37650 | 25.320 | 391 | 271 | 9 | 262 | 636 | 145 | 530 | 5.59e-36 | 142 |
MS.gene021137.t1 | AT5G52510 | 24.227 | 388 | 266 | 7 | 261 | 634 | 266 | 639 | 3.29e-34 | 138 |
MS.gene021137.t1 | AT3G50650 | 27.864 | 323 | 214 | 5 | 272 | 588 | 184 | 493 | 4.54e-32 | 131 |
MS.gene021137.t1 | AT3G49950 | 26.650 | 394 | 261 | 11 | 260 | 636 | 27 | 409 | 1.35e-27 | 116 |
MS.gene021137.t1 | AT1G55580 | 25.472 | 424 | 247 | 12 | 260 | 634 | 41 | 444 | 2.56e-27 | 115 |
MS.gene021137.t1 | AT4G08250 | 27.027 | 407 | 253 | 19 | 248 | 634 | 94 | 476 | 1.44e-24 | 108 |
MS.gene021137.t1 | AT3G13840 | 23.185 | 427 | 275 | 16 | 231 | 634 | 113 | 509 | 1.80e-14 | 77.0 |
MS.gene021137.t1 | AT5G67411 | 32.683 | 205 | 116 | 10 | 382 | 571 | 1 | 198 | 4.80e-13 | 68.9 |
MS.gene021137.t1 | AT4G00150 | 23.978 | 367 | 242 | 12 | 274 | 634 | 218 | 553 | 9.75e-12 | 68.6 |
Find 141 sgRNAs with CRISPR-Local
Find 154 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACCCTTCATATCATTGATTT+TGG | 0.132720 | 4.4:+41925830 | MS.gene021137:CDS |
TTTGCTCTGTCTATTATTAA+TGG | 0.137249 | 4.4:+41926220 | MS.gene021137:CDS |
CTGAATTAATGGACAAATTT+AGG | 0.141247 | 4.4:+41926497 | MS.gene021137:CDS |
GATGATTGAGAAAGAAATTA+TGG | 0.215626 | 4.4:+41926354 | MS.gene021137:CDS |
CTGGTGCTGGTTGTGCCATT+AGG | 0.228538 | 4.4:-41924936 | None:intergenic |
CTTCAAAACCTCTATTGAAT+TGG | 0.238229 | 4.4:-41925178 | None:intergenic |
AAAACAAAACGATAGATTTA+AGG | 0.243289 | 4.4:+41925483 | MS.gene021137:CDS |
GATTTGAGTTATGAACTTTA+TGG | 0.285754 | 4.4:-41924826 | None:intergenic |
AGATCAGAAACAGGAGTATC+AGG | 0.286171 | 4.4:-41925029 | None:intergenic |
CATGATGCTCTTTCCCCTAA+TGG | 0.300350 | 4.4:+41924921 | MS.gene021137:CDS |
AAATGCAGAACCATGTTTCT+AGG | 0.304908 | 4.4:-41926172 | None:intergenic |
ACCGTTGAACTCTGAATTAA+TGG | 0.311304 | 4.4:+41926486 | MS.gene021137:CDS |
TGGTGCTGGTTGTGCCATTA+GGG | 0.317958 | 4.4:-41924935 | None:intergenic |
TTTATATGCTTCAACTTGTT+GGG | 0.327100 | 4.4:+41926603 | MS.gene021137:CDS |
ACTCTTCATCATATTAAGAT+TGG | 0.328028 | 4.4:-41925255 | None:intergenic |
ATGCCCTAGCGTCGCGGAAA+TGG | 0.329797 | 4.4:+41926041 | MS.gene021137:CDS |
ACAGGAGTATCAGGGGAAAA+TGG | 0.330396 | 4.4:-41925020 | None:intergenic |
GTTTCTGATCTTGTTAATCA+TGG | 0.337520 | 4.4:+41925041 | MS.gene021137:CDS |
TTCAAAACCTCTATTGAATT+GGG | 0.346129 | 4.4:-41925177 | None:intergenic |
CATATAAACAATGGCAGGTT+AGG | 0.365053 | 4.4:+41926437 | MS.gene021137:CDS |
ACATGGTTCTGCATTTGATT+AGG | 0.367204 | 4.4:+41926179 | MS.gene021137:CDS |
ATCCTCCATTCACTTCCCTT+TGG | 0.370103 | 4.4:-41926331 | None:intergenic |
GGCCTTGAGGCTCGCCTTGT+AGG | 0.370231 | 4.4:+41925641 | MS.gene021137:CDS |
ATCCCAGTGATCCTCAGTTT+TGG | 0.375536 | 4.4:-41925917 | None:intergenic |
ATTAGCATTTCTGTTGTCAT+TGG | 0.377470 | 4.4:-41925540 | None:intergenic |
CATCAAATACAAAATCTCTA+TGG | 0.379159 | 4.4:-41926540 | None:intergenic |
GAACCCTATAGAAGGTTATA+TGG | 0.379462 | 4.4:+41924758 | MS.gene021137:CDS |
GTCTCCTCAATTCTTTCTGT+CGG | 0.380794 | 4.4:-41925965 | None:intergenic |
TGAGCAACCACCTTCATCTA+AGG | 0.384152 | 4.4:+41925427 | MS.gene021137:CDS |
AAATATGCAAATTTCTTGAA+TGG | 0.386099 | 4.4:-41925764 | None:intergenic |
TGTTGAAACTCATCACAGTT+TGG | 0.391044 | 4.4:-41924729 | None:intergenic |
GAAGCCATATAACCTTCTAT+AGG | 0.392171 | 4.4:-41924762 | None:intergenic |
CTGCCATTGTTTATATGTCT+CGG | 0.394663 | 4.4:-41926431 | None:intergenic |
AAGCTAAGTGGGTCATAAAA+AGG | 0.412714 | 4.4:-41924876 | None:intergenic |
AGGCAACATTCTTCACCCTT+TGG | 0.417772 | 4.4:+41925581 | MS.gene021137:CDS |
TGCTTCAACTTGTTGGGTGC+CGG | 0.420897 | 4.4:+41926609 | MS.gene021137:CDS |
TGCCCTAGCGTCGCGGAAAT+GGG | 0.427853 | 4.4:+41926042 | MS.gene021137:CDS |
TGCCATTGTTTATATGTCTC+GGG | 0.435152 | 4.4:-41926430 | None:intergenic |
CTGAGGAGGAAGAAACTTGT+TGG | 0.436395 | 4.4:-41925204 | None:intergenic |
GGGATAGAGTTCCCCTTACC+AGG | 0.440508 | 4.4:+41925935 | MS.gene021137:CDS |
TACCAAAATCAATGATATGA+AGG | 0.442503 | 4.4:-41925832 | None:intergenic |
TTTCCCATTTCCGCGACGCT+AGG | 0.446236 | 4.4:-41926045 | None:intergenic |
TTCACTTCCCTTTGGTATGA+CGG | 0.446298 | 4.4:-41926323 | None:intergenic |
ACCTTTCCTTCCTTAGATGA+AGG | 0.446858 | 4.4:-41925437 | None:intergenic |
CCGCCAAAACTGAGGATCAC+TGG | 0.456066 | 4.4:+41925914 | MS.gene021137:CDS |
AAGCCATATAACCTTCTATA+GGG | 0.457326 | 4.4:-41924761 | None:intergenic |
CTGTGATTTGTAAGCTAAGT+GGG | 0.457899 | 4.4:-41924887 | None:intergenic |
AATGTTCTCTGCCAACATAT+TGG | 0.459580 | 4.4:-41925132 | None:intergenic |
ATGATTGAGAAAGAAATTAT+GGG | 0.460263 | 4.4:+41926355 | MS.gene021137:CDS |
CCTCAGCCTCAACTCTTGAC+TGG | 0.463471 | 4.4:+41925221 | MS.gene021137:CDS |
TCTCCTCAATTCTTTCTGTC+GGG | 0.464575 | 4.4:-41925964 | None:intergenic |
GATAGAAACTTAATAAGCAT+TGG | 0.465492 | 4.4:-41925875 | None:intergenic |
CAATATGAGAACCCTATAGA+AGG | 0.467769 | 4.4:+41924750 | MS.gene021137:CDS |
CTTTCTGTCGGGCGAAAGCC+TGG | 0.468638 | 4.4:-41925953 | None:intergenic |
CTAAACCTTGTAGCAAAGAA+AGG | 0.469684 | 4.4:-41926256 | None:intergenic |
CACCAGCTCTATCGCCTACA+AGG | 0.469788 | 4.4:-41925655 | None:intergenic |
TTCTGCTATTTATGATATGT+TGG | 0.469875 | 4.4:+41926297 | MS.gene021137:CDS |
ACTGTCGTTGCTACTGGTGC+TGG | 0.476167 | 4.4:-41924949 | None:intergenic |
ATTGCTACTGTCGTTGCTAC+TGG | 0.478569 | 4.4:-41924955 | None:intergenic |
TTTGATTAGGAAGATAAATC+CGG | 0.481346 | 4.4:+41926192 | MS.gene021137:CDS |
ATTCACCTTTCTTTGCTACA+AGG | 0.481484 | 4.4:+41926251 | MS.gene021137:CDS |
TATTTGATGAAGACAGCAAA+TGG | 0.482938 | 4.4:+41926554 | MS.gene021137:CDS |
TTGGCCACTGAAAACCATAA+AGG | 0.486741 | 4.4:-41925856 | None:intergenic |
AATGACAACAGAAATGCTAA+TGG | 0.490229 | 4.4:+41925542 | MS.gene021137:CDS |
CGCCTTGTAGGCGATAGAGC+TGG | 0.491595 | 4.4:+41925653 | MS.gene021137:CDS |
GACAGCAAATGGATGCTTCA+AGG | 0.494379 | 4.4:+41926565 | MS.gene021137:CDS |
TGTCGGGCGAAAGCCTGGTA+AGG | 0.501379 | 4.4:-41925948 | None:intergenic |
TTCCCATTTCCGCGACGCTA+GGG | 0.504392 | 4.4:-41926044 | None:intergenic |
TGATTAACAAGATCAGAAAC+AGG | 0.510638 | 4.4:-41925038 | None:intergenic |
CTCAGCAGCAGTGATTCTCT+TGG | 0.512609 | 4.4:-41925705 | None:intergenic |
AGGGAGAAATAACAAGCAAT+CGG | 0.512691 | 4.4:+41925322 | MS.gene021137:CDS |
CGCCAAAACTGAGGATCACT+GGG | 0.514400 | 4.4:+41925915 | MS.gene021137:CDS |
TTCATCTATTACCAATATGT+TGG | 0.515793 | 4.4:+41925121 | MS.gene021137:CDS |
GCAAATGGATGCTTCAAGGT+TGG | 0.515939 | 4.4:+41926569 | MS.gene021137:CDS |
TCTGTTTCCCAATTCAATAG+AGG | 0.517293 | 4.4:+41925170 | MS.gene021137:CDS |
TGATAAAGCTTTGCTTAATG+TGG | 0.518577 | 4.4:+41925385 | MS.gene021137:CDS |
ATGCAAATTTCTTGAATGGA+GGG | 0.520263 | 4.4:-41925760 | None:intergenic |
GATCAGAAACAGGAGTATCA+GGG | 0.520806 | 4.4:-41925028 | None:intergenic |
TATGCAAATTTCTTGAATGG+AGG | 0.522171 | 4.4:-41925761 | None:intergenic |
CTTTGTGATGCATCGCCAAA+GGG | 0.524740 | 4.4:-41925596 | None:intergenic |
CCAGTCAAGAGTTGAGGCTG+AGG | 0.525294 | 4.4:-41925221 | None:intergenic |
ATAGTTAGCAAGTCGACGAC+CGG | 0.528132 | 4.4:-41925987 | None:intergenic |
GTAGTTGCTGTGAACTGTGT+GGG | 0.528753 | 4.4:+41926106 | MS.gene021137:CDS |
CAGGTTAGGAATACAAGAGC+TGG | 0.537591 | 4.4:+41926451 | MS.gene021137:CDS |
ACCAACACTACTTGAAGCAC+AGG | 0.539497 | 4.4:-41925078 | None:intergenic |
GTTCATAACTCAAATCCTCA+TGG | 0.541442 | 4.4:+41924833 | MS.gene021137:CDS |
TGAGAAAGAAATTATGGGTA+GGG | 0.543075 | 4.4:+41926360 | MS.gene021137:CDS |
GTCGGGCGAAAGCCTGGTAA+GGG | 0.545615 | 4.4:-41925947 | None:intergenic |
GTCAAGAGTTGAGGCTGAGG+AGG | 0.545932 | 4.4:-41925218 | None:intergenic |
AAGATATGAATTGATTATGC+CGG | 0.549732 | 4.4:-41926628 | None:intergenic |
TTTCTATCAAATAGAGAAGG+TGG | 0.552509 | 4.4:+41925890 | MS.gene021137:CDS |
CGAGACATATAAACAATGGC+AGG | 0.556523 | 4.4:+41926432 | MS.gene021137:CDS |
TCCTGTGCTTCAAGTAGTGT+TGG | 0.557015 | 4.4:+41925077 | MS.gene021137:CDS |
TCGCCCGACAGAAAGAATTG+AGG | 0.558363 | 4.4:+41925961 | MS.gene021137:CDS |
CCTTTGTGATGCATCGCCAA+AGG | 0.561319 | 4.4:-41925597 | None:intergenic |
TTGAGAAAGAAATTATGGGT+AGG | 0.562013 | 4.4:+41926359 | MS.gene021137:CDS |
GTGGCTCATTACTTTGCCGA+TGG | 0.563540 | 4.4:+41925620 | MS.gene021137:CDS |
TCATACCAAAGGGAAGTGAA+TGG | 0.566189 | 4.4:+41926326 | MS.gene021137:CDS |
CTTTGCTACAAGGTTTAGAG+AGG | 0.566710 | 4.4:+41926261 | MS.gene021137:CDS |
ACCTTCATCTAAGGAAGGAA+AGG | 0.566844 | 4.4:+41925436 | MS.gene021137:CDS |
TCTGTGATTTGTAAGCTAAG+TGG | 0.568670 | 4.4:-41924888 | None:intergenic |
CGCCTACAAGGCGAGCCTCA+AGG | 0.571405 | 4.4:-41925643 | None:intergenic |
ACCAAAATCAATGATATGAA+GGG | 0.575569 | 4.4:-41925831 | None:intergenic |
AAGGCGAGCCTCAAGGCCAT+CGG | 0.575761 | 4.4:-41925636 | None:intergenic |
CTTTGGCGATGCATCACAAA+GGG | 0.583245 | 4.4:+41925598 | MS.gene021137:CDS |
GCAGTGATTCTCTTGGTGCT+AGG | 0.583817 | 4.4:-41925698 | None:intergenic |
TTTCCTTCCTTAGATGAAGG+TGG | 0.585101 | 4.4:-41925434 | None:intergenic |
TTACTTTGCCGATGGCCTTG+AGG | 0.590932 | 4.4:+41925628 | MS.gene021137:CDS |
ATGAATGTTGTAGCATGTGA+AGG | 0.591903 | 4.4:+41926388 | MS.gene021137:CDS |
GTTGGACGCCGTCATACCAA+AGG | 0.593292 | 4.4:+41926315 | MS.gene021137:CDS |
TGGATGCTTCAAGGTTGGAA+AGG | 0.599055 | 4.4:+41926574 | MS.gene021137:CDS |
GGCTATTAGTGTTGTTGATG+AGG | 0.599082 | 4.4:+41925343 | MS.gene021137:CDS |
TTGGACGCCGTCATACCAAA+GGG | 0.599381 | 4.4:+41926316 | MS.gene021137:CDS |
TCCATTAATTCAGAGTTCAA+CGG | 0.603223 | 4.4:-41926487 | None:intergenic |
TTAGGACTAAGTTAAAGCAA+TGG | 0.607899 | 4.4:+41926515 | MS.gene021137:CDS |
ATGAAGAGTAGAAAGAATCA+CGG | 0.609892 | 4.4:+41925269 | MS.gene021137:CDS |
GATTCTCTTGGTGCTAGGCG+AGG | 0.610614 | 4.4:-41925693 | None:intergenic |
ACAGAAAGAATTGAGGAGAC+CGG | 0.611629 | 4.4:+41925968 | MS.gene021137:CDS |
CAACCACCTTCATCTAAGGA+AGG | 0.614818 | 4.4:+41925431 | MS.gene021137:CDS |
TTCAGTGACAGATTCTTCCA+TGG | 0.614881 | 4.4:+41924782 | MS.gene021137:CDS |
TTGCTGTGAACTGTGTGGGG+AGG | 0.623836 | 4.4:+41926110 | MS.gene021137:CDS |
CATTAGGGGAAAGAGCATCA+TGG | 0.624005 | 4.4:-41924920 | None:intergenic |
AGTTAATAGTCCTAGAAACA+TGG | 0.625319 | 4.4:+41926162 | MS.gene021137:CDS |
ATCAGAAACAGGAGTATCAG+GGG | 0.626350 | 4.4:-41925027 | None:intergenic |
TGGCGATGCATCACAAAGGG+TGG | 0.631669 | 4.4:+41925601 | MS.gene021137:CDS |
AAGTTTCTATCAAATAGAGA+AGG | 0.631857 | 4.4:+41925887 | MS.gene021137:CDS |
GGTGCTGGTTGTGCCATTAG+GGG | 0.631907 | 4.4:-41924934 | None:intergenic |
CCTTTGGCGATGCATCACAA+AGG | 0.636123 | 4.4:+41925597 | MS.gene021137:CDS |
GCTTCAAGTAGTGTTGGTGA+TGG | 0.639348 | 4.4:+41925083 | MS.gene021137:CDS |
TGAAGAGTAGAAAGAATCAC+GGG | 0.640811 | 4.4:+41925270 | MS.gene021137:CDS |
TCTAAACCAGTCAAGAGTTG+AGG | 0.645298 | 4.4:-41925227 | None:intergenic |
GGCCCGAGACATATAAACAA+TGG | 0.646279 | 4.4:+41926428 | MS.gene021137:CDS |
TAGTTGCTGTGAACTGTGTG+GGG | 0.647970 | 4.4:+41926107 | MS.gene021137:CDS |
TCGGGCGAAAGCCTGGTAAG+GGG | 0.648782 | 4.4:-41925946 | None:intergenic |
AAGGTTTAGAAAGAGTTGAG+AGG | 0.653367 | 4.4:+41926407 | MS.gene021137:CDS |
AAGGTGGACCGCCAAAACTG+AGG | 0.656550 | 4.4:+41925906 | MS.gene021137:CDS |
GCTAGGGCATTGTACTCGAA+CGG | 0.658627 | 4.4:-41926028 | None:intergenic |
TACCAAAGGGAAGTGAATGG+AGG | 0.666797 | 4.4:+41926329 | MS.gene021137:CDS |
AGTACAATGCCCTAGCGTCG+CGG | 0.670515 | 4.4:+41926035 | MS.gene021137:CDS |
GGTAGTTGCTGTGAACTGTG+TGG | 0.682353 | 4.4:+41926105 | MS.gene021137:CDS |
TCTTAAAATCAAGAGCTACG+AGG | 0.741825 | 4.4:+41926084 | MS.gene021137:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAACAAAACGATAGATTTA+AGG | + | chr4.4:41925483-41925502 | MS.gene021137:CDS | 20.0% |
!! | AAATATGCAAATTTCTTGAA+TGG | - | chr4.4:41925767-41925786 | None:intergenic | 20.0% |
!! | ATGATTGAGAAAGAAATTAT+GGG | + | chr4.4:41926355-41926374 | MS.gene021137:CDS | 20.0% |
! | AAGTTTCTATCAAATAGAGA+AGG | + | chr4.4:41925887-41925906 | MS.gene021137:CDS | 25.0% |
! | ACCAAAATCAATGATATGAA+GGG | - | chr4.4:41925834-41925853 | None:intergenic | 25.0% |
! | ACTCTTCATCATATTAAGAT+TGG | - | chr4.4:41925258-41925277 | None:intergenic | 25.0% |
! | CATCAAATACAAAATCTCTA+TGG | - | chr4.4:41926543-41926562 | None:intergenic | 25.0% |
! | GATAGAAACTTAATAAGCAT+TGG | - | chr4.4:41925878-41925897 | None:intergenic | 25.0% |
! | GATGATTGAGAAAGAAATTA+TGG | + | chr4.4:41926354-41926373 | MS.gene021137:CDS | 25.0% |
! | TACCAAAATCAATGATATGA+AGG | - | chr4.4:41925835-41925854 | None:intergenic | 25.0% |
! | TTCAAAACCTCTATTGAATT+GGG | - | chr4.4:41925180-41925199 | None:intergenic | 25.0% |
! | TTCATCTATTACCAATATGT+TGG | + | chr4.4:41925121-41925140 | MS.gene021137:CDS | 25.0% |
! | TTTGATTAGGAAGATAAATC+CGG | + | chr4.4:41926192-41926211 | MS.gene021137:CDS | 25.0% |
! | TTTGCTCTGTCTATTATTAA+TGG | + | chr4.4:41926220-41926239 | MS.gene021137:CDS | 25.0% |
!! | ATCTTGTTAATCATGGTTTT+CGG | + | chr4.4:41925048-41925067 | MS.gene021137:CDS | 25.0% |
!! | CTGAATTAATGGACAAATTT+AGG | + | chr4.4:41926497-41926516 | MS.gene021137:CDS | 25.0% |
!! | GATTTGAGTTATGAACTTTA+TGG | - | chr4.4:41924829-41924848 | None:intergenic | 25.0% |
!! | TTCTGCTATTTATGATATGT+TGG | + | chr4.4:41926297-41926316 | MS.gene021137:CDS | 25.0% |
!! | TTTATATGCTTCAACTTGTT+GGG | + | chr4.4:41926603-41926622 | MS.gene021137:CDS | 25.0% |
!! | TTTTATATGCTTCAACTTGT+TGG | + | chr4.4:41926602-41926621 | MS.gene021137:CDS | 25.0% |
!!! | ATTGATTTTGGTATCCTTTA+TGG | + | chr4.4:41925842-41925861 | MS.gene021137:CDS | 25.0% |
AAGAAGAAGAAGAAGAAGAA+GGG | + | chr4.4:41925297-41925316 | MS.gene021137:CDS | 30.0% | |
AAGCCATATAACCTTCTATA+GGG | - | chr4.4:41924764-41924783 | None:intergenic | 30.0% | |
AATGACAACAGAAATGCTAA+TGG | + | chr4.4:41925542-41925561 | MS.gene021137:CDS | 30.0% | |
AGTTAATAGTCCTAGAAACA+TGG | + | chr4.4:41926162-41926181 | MS.gene021137:CDS | 30.0% | |
ATAGACAGAGCAAAAATATC+CGG | - | chr4.4:41926214-41926233 | None:intergenic | 30.0% | |
ATGAAGAGTAGAAAGAATCA+CGG | + | chr4.4:41925269-41925288 | MS.gene021137:CDS | 30.0% | |
ATGCAAATTTCTTGAATGGA+GGG | - | chr4.4:41925763-41925782 | None:intergenic | 30.0% | |
ATTAGCATTTCTGTTGTCAT+TGG | - | chr4.4:41925543-41925562 | None:intergenic | 30.0% | |
CTTCAAAACCTCTATTGAAT+TGG | - | chr4.4:41925181-41925200 | None:intergenic | 30.0% | |
GTTTCTGATCTTGTTAATCA+TGG | + | chr4.4:41925041-41925060 | MS.gene021137:CDS | 30.0% | |
TATGCAAATTTCTTGAATGG+AGG | - | chr4.4:41925764-41925783 | None:intergenic | 30.0% | |
TATTTGATGAAGACAGCAAA+TGG | + | chr4.4:41926554-41926573 | MS.gene021137:CDS | 30.0% | |
TCCATTAATTCAGAGTTCAA+CGG | - | chr4.4:41926490-41926509 | None:intergenic | 30.0% | |
TGAGAAAGAAATTATGGGTA+GGG | + | chr4.4:41926360-41926379 | MS.gene021137:CDS | 30.0% | |
TGATAAAGCTTTGCTTAATG+TGG | + | chr4.4:41925385-41925404 | MS.gene021137:CDS | 30.0% | |
TGATTAACAAGATCAGAAAC+AGG | - | chr4.4:41925041-41925060 | None:intergenic | 30.0% | |
TTAGGACTAAGTTAAAGCAA+TGG | + | chr4.4:41926515-41926534 | MS.gene021137:CDS | 30.0% | |
TTGAGAAAGAAATTATGGGT+AGG | + | chr4.4:41926359-41926378 | MS.gene021137:CDS | 30.0% | |
TTTCTATCAAATAGAGAAGG+TGG | + | chr4.4:41925890-41925909 | MS.gene021137:CDS | 30.0% | |
!! | TTTTTGCTATCACGTTTCTT+TGG | - | chr4.4:41925467-41925486 | None:intergenic | 30.0% |
!!! | ACCCTTCATATCATTGATTT+TGG | + | chr4.4:41925830-41925849 | MS.gene021137:CDS | 30.0% |
!!! | ATGGTCTTTTAAAGCAGATT+AGG | + | chr4.4:41925561-41925580 | MS.gene021137:CDS | 30.0% |
AAATGCAGAACCATGTTTCT+AGG | - | chr4.4:41926175-41926194 | None:intergenic | 35.0% | |
AAGCTAAGTGGGTCATAAAA+AGG | - | chr4.4:41924879-41924898 | None:intergenic | 35.0% | |
AAGGTTTAGAAAGAGTTGAG+AGG | + | chr4.4:41926407-41926426 | MS.gene021137:CDS | 35.0% | |
AATGTTCTCTGCCAACATAT+TGG | - | chr4.4:41925135-41925154 | None:intergenic | 35.0% | |
ACCGTTGAACTCTGAATTAA+TGG | + | chr4.4:41926486-41926505 | MS.gene021137:CDS | 35.0% | |
AGGGAGAAATAACAAGCAAT+CGG | + | chr4.4:41925322-41925341 | MS.gene021137:CDS | 35.0% | |
ATGAATGTTGTAGCATGTGA+AGG | + | chr4.4:41926388-41926407 | MS.gene021137:CDS | 35.0% | |
ATTCACCTTTCTTTGCTACA+AGG | + | chr4.4:41926251-41926270 | MS.gene021137:CDS | 35.0% | |
CAATATGAGAACCCTATAGA+AGG | + | chr4.4:41924750-41924769 | MS.gene021137:CDS | 35.0% | |
CATATAAACAATGGCAGGTT+AGG | + | chr4.4:41926437-41926456 | MS.gene021137:CDS | 35.0% | |
CTAAACCTTGTAGCAAAGAA+AGG | - | chr4.4:41926259-41926278 | None:intergenic | 35.0% | |
CTGCCATTGTTTATATGTCT+CGG | - | chr4.4:41926434-41926453 | None:intergenic | 35.0% | |
GAACCCTATAGAAGGTTATA+TGG | + | chr4.4:41924758-41924777 | MS.gene021137:CDS | 35.0% | |
GAAGAAGAAGAAGAAGAAGA+AGG | + | chr4.4:41925296-41925315 | MS.gene021137:CDS | 35.0% | |
GAAGCCATATAACCTTCTAT+AGG | - | chr4.4:41924765-41924784 | None:intergenic | 35.0% | |
GCTCATTCTGCAAAAATTCA+CGG | - | chr4.4:41925412-41925431 | None:intergenic | 35.0% | |
GTTCATAACTCAAATCCTCA+TGG | + | chr4.4:41924833-41924852 | MS.gene021137:CDS | 35.0% | |
TCTGTTTCCCAATTCAATAG+AGG | + | chr4.4:41925170-41925189 | MS.gene021137:CDS | 35.0% | |
TCTTAAAATCAAGAGCTACG+AGG | + | chr4.4:41926084-41926103 | MS.gene021137:CDS | 35.0% | |
TGAAAAATCAGTGTCTTCCA+TGG | - | chr4.4:41924802-41924821 | None:intergenic | 35.0% | |
TGAAGAGTAGAAAGAATCAC+GGG | + | chr4.4:41925270-41925289 | MS.gene021137:CDS | 35.0% | |
TGCCATTGTTTATATGTCTC+GGG | - | chr4.4:41926433-41926452 | None:intergenic | 35.0% | |
TGTTGAAACTCATCACAGTT+TGG | - | chr4.4:41924732-41924751 | None:intergenic | 35.0% | |
! | ACATGGTTCTGCATTTGATT+AGG | + | chr4.4:41926179-41926198 | MS.gene021137:CDS | 35.0% |
! | CTGTGATTTGTAAGCTAAGT+GGG | - | chr4.4:41924890-41924909 | None:intergenic | 35.0% |
! | GTATCCTTTATGGTTTTCAG+TGG | + | chr4.4:41925852-41925871 | MS.gene021137:CDS | 35.0% |
! | TCTGTGATTTGTAAGCTAAG+TGG | - | chr4.4:41924891-41924910 | None:intergenic | 35.0% |
ACAGAAAGAATTGAGGAGAC+CGG | + | chr4.4:41925968-41925987 | MS.gene021137:CDS | 40.0% | |
ACCTTCATCTAAGGAAGGAA+AGG | + | chr4.4:41925436-41925455 | MS.gene021137:CDS | 40.0% | |
ACCTTTCCTTCCTTAGATGA+AGG | - | chr4.4:41925440-41925459 | None:intergenic | 40.0% | |
CGAGACATATAAACAATGGC+AGG | + | chr4.4:41926432-41926451 | MS.gene021137:CDS | 40.0% | |
CTTTGCTACAAGGTTTAGAG+AGG | + | chr4.4:41926261-41926280 | MS.gene021137:CDS | 40.0% | |
GTCTCCTCAATTCTTTCTGT+CGG | - | chr4.4:41925968-41925987 | None:intergenic | 40.0% | |
TCATACCAAAGGGAAGTGAA+TGG | + | chr4.4:41926326-41926345 | MS.gene021137:CDS | 40.0% | |
TCTAAACCAGTCAAGAGTTG+AGG | - | chr4.4:41925230-41925249 | None:intergenic | 40.0% | |
TCTCCTCAATTCTTTCTGTC+GGG | - | chr4.4:41925967-41925986 | None:intergenic | 40.0% | |
TTCACTTCCCTTTGGTATGA+CGG | - | chr4.4:41926326-41926345 | None:intergenic | 40.0% | |
TTCAGTGACAGATTCTTCCA+TGG | + | chr4.4:41924782-41924801 | MS.gene021137:CDS | 40.0% | |
TTGGCCACTGAAAACCATAA+AGG | - | chr4.4:41925859-41925878 | None:intergenic | 40.0% | |
TTTCCTTCCTTAGATGAAGG+TGG | - | chr4.4:41925437-41925456 | None:intergenic | 40.0% | |
! | GGCTATTAGTGTTGTTGATG+AGG | + | chr4.4:41925343-41925362 | MS.gene021137:CDS | 40.0% |
!! | AGATCAGAAACAGGAGTATC+AGG | - | chr4.4:41925032-41925051 | None:intergenic | 40.0% |
!! | ATCAGAAACAGGAGTATCAG+GGG | - | chr4.4:41925030-41925049 | None:intergenic | 40.0% |
!! | GATCAGAAACAGGAGTATCA+GGG | - | chr4.4:41925031-41925050 | None:intergenic | 40.0% |
ACCAACACTACTTGAAGCAC+AGG | - | chr4.4:41925081-41925100 | None:intergenic | 45.0% | |
AGGCAACATTCTTCACCCTT+TGG | + | chr4.4:41925581-41925600 | MS.gene021137:CDS | 45.0% | |
ATAGTTAGCAAGTCGACGAC+CGG | - | chr4.4:41925990-41926009 | None:intergenic | 45.0% | |
ATCCTCCATTCACTTCCCTT+TGG | - | chr4.4:41926334-41926353 | None:intergenic | 45.0% | |
ATTGCTACTGTCGTTGCTAC+TGG | - | chr4.4:41924958-41924977 | None:intergenic | 45.0% | |
CAACCACCTTCATCTAAGGA+AGG | + | chr4.4:41925431-41925450 | MS.gene021137:CDS | 45.0% | |
CAGGTTAGGAATACAAGAGC+TGG | + | chr4.4:41926451-41926470 | MS.gene021137:CDS | 45.0% | |
CATGATGCTCTTTCCCCTAA+TGG | + | chr4.4:41924921-41924940 | MS.gene021137:CDS | 45.0% | |
CTGAGGAGGAAGAAACTTGT+TGG | - | chr4.4:41925207-41925226 | None:intergenic | 45.0% | |
CTTTGGCGATGCATCACAAA+GGG | + | chr4.4:41925598-41925617 | MS.gene021137:CDS | 45.0% | |
CTTTGTGATGCATCGCCAAA+GGG | - | chr4.4:41925599-41925618 | None:intergenic | 45.0% | |
GACAGCAAATGGATGCTTCA+AGG | + | chr4.4:41926565-41926584 | MS.gene021137:CDS | 45.0% | |
GCAAATGGATGCTTCAAGGT+TGG | + | chr4.4:41926569-41926588 | MS.gene021137:CDS | 45.0% | |
GGCCCGAGACATATAAACAA+TGG | + | chr4.4:41926428-41926447 | MS.gene021137:CDS | 45.0% | |
GTAGTTGCTGTGAACTGTGT+GGG | + | chr4.4:41926106-41926125 | MS.gene021137:CDS | 45.0% | |
GTGGGTCATAAAAAGGTCTC+TGG | - | chr4.4:41924872-41924891 | None:intergenic | 45.0% | |
TACCAAAGGGAAGTGAATGG+AGG | + | chr4.4:41926329-41926348 | MS.gene021137:CDS | 45.0% | |
TAGTTGCTGTGAACTGTGTG+GGG | + | chr4.4:41926107-41926126 | MS.gene021137:CDS | 45.0% | |
TCCTGTGCTTCAAGTAGTGT+TGG | + | chr4.4:41925077-41925096 | MS.gene021137:CDS | 45.0% | |
TGAGCAACCACCTTCATCTA+AGG | + | chr4.4:41925427-41925446 | MS.gene021137:CDS | 45.0% | |
TGGATGCTTCAAGGTTGGAA+AGG | + | chr4.4:41926574-41926593 | MS.gene021137:CDS | 45.0% | |
! | ATCCCAGTGATCCTCAGTTT+TGG | - | chr4.4:41925920-41925939 | None:intergenic | 45.0% |
! | GGTCAACGTTTTCTTCCATG+AGG | - | chr4.4:41924851-41924870 | None:intergenic | 45.0% |
!! | ACAGGAGTATCAGGGGAAAA+TGG | - | chr4.4:41925023-41925042 | None:intergenic | 45.0% |
!! | CATTAGGGGAAAGAGCATCA+TGG | - | chr4.4:41924923-41924942 | None:intergenic | 45.0% |
!! | GCTTCAAGTAGTGTTGGTGA+TGG | + | chr4.4:41925083-41925102 | MS.gene021137:CDS | 45.0% |
CCTTTGGCGATGCATCACAA+AGG | + | chr4.4:41925597-41925616 | MS.gene021137:CDS | 50.0% | |
CCTTTGTGATGCATCGCCAA+AGG | - | chr4.4:41925600-41925619 | None:intergenic | 50.0% | |
CGCCAAAACTGAGGATCACT+GGG | + | chr4.4:41925915-41925934 | MS.gene021137:CDS | 50.0% | |
CTCAGCAGCAGTGATTCTCT+TGG | - | chr4.4:41925708-41925727 | None:intergenic | 50.0% | |
GGTAGTTGCTGTGAACTGTG+TGG | + | chr4.4:41926105-41926124 | MS.gene021137:CDS | 50.0% | |
GTGGCTCATTACTTTGCCGA+TGG | + | chr4.4:41925620-41925639 | MS.gene021137:CDS | 50.0% | |
TCGCCCGACAGAAAGAATTG+AGG | + | chr4.4:41925961-41925980 | MS.gene021137:CDS | 50.0% | |
TTGGACGCCGTCATACCAAA+GGG | + | chr4.4:41926316-41926335 | MS.gene021137:CDS | 50.0% | |
! | TTACTTTGCCGATGGCCTTG+AGG | + | chr4.4:41925628-41925647 | MS.gene021137:CDS | 50.0% |
!! | CCAGTGATCCTCAGTTTTGG+CGG | - | chr4.4:41925917-41925936 | None:intergenic | 50.0% |
!! | GCAGTGATTCTCTTGGTGCT+AGG | - | chr4.4:41925701-41925720 | None:intergenic | 50.0% |
!! | GCTAGGGCATTGTACTCGAA+CGG | - | chr4.4:41926031-41926050 | None:intergenic | 50.0% |
!! | TGCTTCAACTTGTTGGGTGC+CGG | + | chr4.4:41926609-41926628 | MS.gene021137:CDS | 50.0% |
!! | TGGTGCTGGTTGTGCCATTA+GGG | - | chr4.4:41924938-41924957 | None:intergenic | 50.0% |
AAGGTGGACCGCCAAAACTG+AGG | + | chr4.4:41925906-41925925 | MS.gene021137:CDS | 55.0% | |
ACTGTCGTTGCTACTGGTGC+TGG | - | chr4.4:41924952-41924971 | None:intergenic | 55.0% | |
AGTACAATGCCCTAGCGTCG+CGG | + | chr4.4:41926035-41926054 | MS.gene021137:CDS | 55.0% | |
CACCAGCTCTATCGCCTACA+AGG | - | chr4.4:41925658-41925677 | None:intergenic | 55.0% | |
CCAGTCAAGAGTTGAGGCTG+AGG | - | chr4.4:41925224-41925243 | None:intergenic | 55.0% | |
CCGCCAAAACTGAGGATCAC+TGG | + | chr4.4:41925914-41925933 | MS.gene021137:CDS | 55.0% | |
CCTCAGCCTCAACTCTTGAC+TGG | + | chr4.4:41925221-41925240 | MS.gene021137:CDS | 55.0% | |
GGGATAGAGTTCCCCTTACC+AGG | + | chr4.4:41925935-41925954 | MS.gene021137:CDS | 55.0% | |
GTCAAGAGTTGAGGCTGAGG+AGG | - | chr4.4:41925221-41925240 | None:intergenic | 55.0% | |
GTTGGACGCCGTCATACCAA+AGG | + | chr4.4:41926315-41926334 | MS.gene021137:CDS | 55.0% | |
TGGCGATGCATCACAAAGGG+TGG | + | chr4.4:41925601-41925620 | MS.gene021137:CDS | 55.0% | |
TTCCCATTTCCGCGACGCTA+GGG | - | chr4.4:41926047-41926066 | None:intergenic | 55.0% | |
TTGCTGTGAACTGTGTGGGG+AGG | + | chr4.4:41926110-41926129 | MS.gene021137:CDS | 55.0% | |
TTTCCCATTTCCGCGACGCT+AGG | - | chr4.4:41926048-41926067 | None:intergenic | 55.0% | |
!! | CTGGTGCTGGTTGTGCCATT+AGG | - | chr4.4:41924939-41924958 | None:intergenic | 55.0% |
!! | GATTCTCTTGGTGCTAGGCG+AGG | - | chr4.4:41925696-41925715 | None:intergenic | 55.0% |
!! | GGTGCTGGTTGTGCCATTAG+GGG | - | chr4.4:41924937-41924956 | None:intergenic | 55.0% |
AAGGCGAGCCTCAAGGCCAT+CGG | - | chr4.4:41925639-41925658 | None:intergenic | 60.0% | |
ATGCCCTAGCGTCGCGGAAA+TGG | + | chr4.4:41926041-41926060 | MS.gene021137:CDS | 60.0% | |
CGCCTTGTAGGCGATAGAGC+TGG | + | chr4.4:41925653-41925672 | MS.gene021137:CDS | 60.0% | |
CTTTCTGTCGGGCGAAAGCC+TGG | - | chr4.4:41925956-41925975 | None:intergenic | 60.0% | |
GTCGGGCGAAAGCCTGGTAA+GGG | - | chr4.4:41925950-41925969 | None:intergenic | 60.0% | |
TCGGGCGAAAGCCTGGTAAG+GGG | - | chr4.4:41925949-41925968 | None:intergenic | 60.0% | |
TGCCCTAGCGTCGCGGAAAT+GGG | + | chr4.4:41926042-41926061 | MS.gene021137:CDS | 60.0% | |
TGTCGGGCGAAAGCCTGGTA+AGG | - | chr4.4:41925951-41925970 | None:intergenic | 60.0% | |
CGCCTACAAGGCGAGCCTCA+AGG | - | chr4.4:41925646-41925665 | None:intergenic | 65.0% | |
GGCCTTGAGGCTCGCCTTGT+AGG | + | chr4.4:41925641-41925660 | MS.gene021137:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.4 | gene | 41924723 | 41926636 | 41924723 | ID=MS.gene021137 |
chr4.4 | mRNA | 41924723 | 41926636 | 41924723 | ID=MS.gene021137.t1;Parent=MS.gene021137 |
chr4.4 | exon | 41924723 | 41926636 | 41924723 | ID=MS.gene021137.t1.exon1;Parent=MS.gene021137.t1 |
chr4.4 | CDS | 41924723 | 41926636 | 41924723 | ID=cds.MS.gene021137.t1;Parent=MS.gene021137.t1 |
Gene Sequence |
Protein sequence |