AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene021281

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene021281.t1 MTR_3g025840 72.340 188 10 1 18 163 1 188 7.49e-90 271
MS.gene021281.t1 MTR_3g025840 69.841 63 6 2 164 213 84 146 6.20e-17 80.1
MS.gene021281.t1 MTR_4g098870 94.792 96 5 0 225 320 266 361 1.29e-53 184
MS.gene021281.t1 MTR_4g098870 94.792 96 5 0 225 320 266 361 1.32e-53 184
MS.gene021281.t1 MTR_4g098870 94.792 96 5 0 225 320 286 381 1.67e-53 184
MS.gene021281.t1 MTR_4g098870 94.792 96 5 0 225 320 286 381 1.69e-53 184
MS.gene021281.t1 MTR_4g098870 94.792 96 5 0 225 320 305 400 2.40e-53 184
MS.gene021281.t1 MTR_5g014040 76.712 73 17 0 248 320 290 362 2.26e-28 115
MS.gene021281.t1 MTR_5g014040 74.026 77 20 0 248 324 250 326 3.26e-28 114
MS.gene021281.t1 MTR_5g014040 78.082 73 16 0 248 320 290 362 3.95e-28 114
MS.gene021281.t1 MTR_2g090675 45.455 99 43 1 222 320 125 212 2.01e-20 91.7
MS.gene021281.t1 MTR_4g078810 66.667 54 18 0 267 320 156 209 3.27e-20 90.9
MS.gene021281.t1 MTR_2g450070 62.963 54 20 0 267 320 211 264 5.07e-16 79.3
MS.gene021281.t1 MTR_2g450070 62.963 54 20 0 267 320 211 264 5.35e-16 79.3
MS.gene021281.t1 MTR_4g131570 61.404 57 22 0 264 320 198 254 1.07e-15 78.2
MS.gene021281.t1 MTR_3g106220 59.322 59 24 0 262 320 191 249 1.25e-15 78.2
MS.gene021281.t1 MTR_1g032570 64.151 53 19 0 268 320 130 182 2.83e-15 76.6
MS.gene021281.t1 MTR_1g032570 64.151 53 19 0 268 320 199 251 3.29e-15 76.6
MS.gene021281.t1 MTR_4g121020 64.151 53 19 0 268 320 110 162 3.99e-15 76.3
MS.gene021281.t1 MTR_4g121020 64.151 53 19 0 268 320 214 266 4.36e-15 76.3
MS.gene021281.t1 MTR_4g121020 64.151 53 19 0 268 320 214 266 4.36e-15 76.3
MS.gene021281.t1 MTR_4g131600 57.377 61 23 1 260 320 195 252 1.21e-14 75.1
MS.gene021281.t1 MTR_7g089010 58.491 53 22 0 268 320 90 142 3.98e-14 72.0
MS.gene021281.t1 MTR_4g131580 60.714 56 22 0 265 320 196 251 3.99e-14 73.6
MS.gene021281.t1 MTR_4g064730 58.491 53 22 0 268 320 130 182 4.39e-14 72.0
MS.gene021281.t1 MTR_1g013170 54.386 57 26 0 264 320 186 242 2.33e-13 70.9
MS.gene021281.t1 MTR_7g117705 57.407 54 23 0 267 320 189 242 3.59e-13 70.1
MS.gene021281.t1 MTR_3g102600 57.447 47 20 0 274 320 88 134 3.94e-13 66.2
MS.gene021281.t1 MTR_2g034960 51.786 56 27 0 265 320 207 262 5.69e-13 70.1
MS.gene021281.t1 MTR_1g013180 57.407 54 23 0 267 320 340 393 5.86e-13 70.1
MS.gene021281.t1 MTR_8g079940 62.264 53 20 0 268 320 208 260 6.03e-13 69.7
MS.gene021281.t1 MTR_3g102600 57.447 47 20 0 274 320 137 183 7.65e-13 66.6
MS.gene021281.t1 MTR_7g026400 54.717 53 24 0 268 320 156 208 8.54e-13 69.3
MS.gene021281.t1 MTR_3g102590 57.407 54 23 0 267 320 141 194 9.30e-13 67.4
MS.gene021281.t1 MTR_3g102600 55.319 47 21 0 274 320 88 134 1.60e-12 65.5
MS.gene021281.t1 MTR_4g021760 50.943 53 26 0 268 320 168 220 2.06e-12 67.4
MS.gene021281.t1 MTR_3g102600 55.319 47 21 0 274 320 137 183 2.37e-12 65.9
MS.gene021281.t1 MTR_3g102590 59.615 52 21 0 267 318 141 192 2.77e-12 65.1
MS.gene021281.t1 MTR_3g086100 58.491 53 22 0 268 320 127 179 3.68e-12 67.4
MS.gene021281.t1 MTR_3g086100 58.491 53 22 0 268 320 198 250 3.89e-12 67.4
MS.gene021281.t1 MTR_1g080330 45.055 91 31 3 233 320 153 227 6.98e-12 65.5
MS.gene021281.t1 MTR_1g080330 45.055 91 31 3 233 320 153 227 1.07e-11 65.5
MS.gene021281.t1 MTR_4g021845 47.273 55 29 0 264 318 163 217 4.61e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene021281.t1 AT1G18640 68.116 138 44 0 26 163 49 186 2.22e-60 195
MS.gene021281.t1 AT1G18640 67.213 61 7 2 166 213 84 144 6.39e-15 74.3
MS.gene021281.t1 AT1G18640 68.116 138 44 0 26 163 49 186 4.96e-60 194
MS.gene021281.t1 AT1G18640 67.213 61 7 2 166 213 84 144 6.01e-15 74.3
MS.gene021281.t1 AT5G44190 74.545 55 14 0 266 320 144 198 1.73e-21 94.0
MS.gene021281.t1 AT5G44190 74.545 55 14 0 266 320 144 198 1.74e-21 94.4
MS.gene021281.t1 AT4G18020 82.692 52 9 0 269 320 296 347 3.45e-21 94.4
MS.gene021281.t1 AT4G18020 82.692 52 9 0 269 320 296 347 3.45e-21 94.4
MS.gene021281.t1 AT4G18020 82.692 52 9 0 269 320 296 347 3.45e-21 94.4
MS.gene021281.t1 AT4G18020 82.692 52 9 0 269 320 296 347 3.45e-21 94.4
MS.gene021281.t1 AT4G18020 82.692 52 9 0 269 320 296 347 3.45e-21 94.4
MS.gene021281.t1 AT4G18020 82.692 52 9 0 269 320 296 347 3.45e-21 94.4
MS.gene021281.t1 AT4G18020 82.692 52 9 0 269 320 296 347 3.58e-21 94.4
MS.gene021281.t1 AT4G18020 82.692 52 9 0 269 320 296 347 3.58e-21 94.4
MS.gene021281.t1 AT4G18020 82.692 52 9 0 269 320 296 347 3.58e-21 94.4
MS.gene021281.t1 AT4G18020 82.692 52 9 0 269 320 296 347 3.58e-21 94.4
MS.gene021281.t1 AT4G18020 82.692 52 9 0 269 320 296 347 3.58e-21 94.4
MS.gene021281.t1 AT2G20570 56.962 79 34 0 242 320 142 220 2.61e-20 91.3
MS.gene021281.t1 AT2G20570 72.222 54 15 0 267 320 151 204 2.84e-20 91.3
MS.gene021281.t1 AT5G58080 64.286 56 20 0 265 320 190 245 2.23e-17 83.2
MS.gene021281.t1 AT2G25180 68.519 54 17 0 267 320 193 246 1.31e-15 77.8
MS.gene021281.t1 AT2G40970 45.679 81 44 0 240 320 76 156 2.91e-15 74.7
MS.gene021281.t1 AT2G01760 64.151 53 19 0 268 320 134 186 3.16e-15 75.5
MS.gene021281.t1 AT3G10760 43.678 87 49 0 234 320 70 156 3.81e-15 75.5
MS.gene021281.t1 AT2G01760 64.151 53 19 0 268 320 199 251 5.33e-15 75.5
MS.gene021281.t1 AT2G01760 64.151 53 19 0 268 320 227 279 7.33e-15 75.1
MS.gene021281.t1 AT5G59570 58.491 53 22 0 268 320 140 192 1.11e-14 73.9
MS.gene021281.t1 AT5G59570 58.491 53 22 0 268 320 140 192 1.11e-14 73.9
MS.gene021281.t1 AT5G05090 58.491 53 22 0 268 320 80 132 1.43e-14 73.2
MS.gene021281.t1 AT3G46640 58.491 53 22 0 268 320 143 195 2.23e-14 73.2
MS.gene021281.t1 AT3G46640 58.491 53 22 0 268 320 143 195 2.23e-14 73.2
MS.gene021281.t1 AT4G31920 53.125 64 30 0 257 320 171 234 2.37e-14 73.9
MS.gene021281.t1 AT3G46640 58.491 53 22 0 268 320 143 195 2.95e-14 72.8
MS.gene021281.t1 AT3G16857 60.377 53 21 0 268 320 166 218 6.56e-14 72.8
MS.gene021281.t1 AT3G16857 60.377 53 21 0 268 320 236 288 6.91e-14 72.8
MS.gene021281.t1 AT3G16857 60.377 53 21 0 268 320 236 288 7.54e-14 72.8
MS.gene021281.t1 AT5G49240 54.902 51 23 0 268 318 222 272 2.02e-11 64.3
MS.gene021281.t1 AT5G07210 50.943 53 26 0 268 320 229 281 4.50e-11 64.3
MS.gene021281.t1 AT5G07210 50.943 53 26 0 268 320 221 273 4.72e-11 64.3
MS.gene021281.t1 AT3G62670 45.238 84 37 4 245 320 185 267 4.96e-11 63.9
MS.gene021281.t1 AT1G67710 62.745 51 18 1 271 320 121 171 5.08e-11 63.9
MS.gene021281.t1 AT1G67710 62.745 51 18 1 271 320 130 180 5.97e-11 63.5
MS.gene021281.t1 AT1G67710 62.745 51 18 1 271 320 195 245 6.61e-11 63.5

Find 59 sgRNAs with CRISPR-Local

Find 256 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCCATTAGCCTTTAGTTTC+TGG 0.105326 6.1:-46271770 None:intergenic
CGCTATTCCTTCTCGAATAT+TGG 0.160903 6.1:+46272923 MS.gene021281:CDS
GGGTTGAAAATGAAGGAATT+TGG 0.231705 6.1:+46273307 MS.gene021281:intron
ATCAAAACCAAATCTCAAAA+AGG 0.255382 6.1:+46269635 MS.gene021281:CDS
TTGATGATGGATAGAAATTC+TGG 0.271373 6.1:+46270744 MS.gene021281:intron
GGTTGAAAATGAAGGAATTT+GGG 0.285926 6.1:+46273308 MS.gene021281:intron
GTAATGACATTTACACGAAC+TGG 0.320424 6.1:-46269585 None:intergenic
ATGGAAGCTTTGATCAGTTA+TGG 0.352182 6.1:+46269555 MS.gene021281:CDS
TAATGTGGCAAGCCATCTTC+AGG 0.386166 6.1:+46272977 MS.gene021281:CDS
TTGAGGAAGCCTTGGCTGCT+AGG 0.404143 6.1:+46271000 MS.gene021281:CDS
TGGAAGCTTTGATCAGTTAT+GGG 0.406259 6.1:+46269556 MS.gene021281:CDS
TTGTTTAGAACCTTCACATT+TGG 0.411730 6.1:-46272586 None:intergenic
AAGCATGTATATCTGATCTC+AGG 0.425358 6.1:+46271792 MS.gene021281:CDS
GTTATATTTCACAGAGCAAT+GGG 0.427506 6.1:+46270963 MS.gene021281:intron
GCAGCCAATGCTTCCTCAAA+AGG 0.433886 6.1:-46272178 None:intergenic
TTGAGGAAGCATTGGCTGCT+AGG 0.443908 6.1:+46272182 MS.gene021281:CDS
TGGATTAACTCTTCAATGCC+AGG 0.447873 6.1:-46271750 None:intergenic
TGTGGATAGCACTGTGTGCC+TGG 0.453183 6.1:+46270801 MS.gene021281:CDS
GCAGCCAAGGCTTCCTCAAA+AGG 0.454284 6.1:-46270996 None:intergenic
TTAATATGCAGGCTTTCCCC+TGG 0.464374 6.1:+46271732 MS.gene021281:intron
AAGGAAAGGCTGTTGCAGAC+TGG 0.487091 6.1:+46272021 MS.gene021281:CDS
ATCCAGAAACTAAAGGCTAA+TGG 0.487422 6.1:+46271768 MS.gene021281:CDS
AATGTTGGATCTACGATCCA+TGG 0.500572 6.1:-46269513 None:intergenic
TACTTTGGTCTCAGGTAGAC+TGG 0.503714 6.1:+46272844 MS.gene021281:intron
GGATAGAAATTCTGGAGCTA+TGG 0.509058 6.1:+46270752 MS.gene021281:intron
CTGGAAAAGCTGTTGCAGAA+TGG 0.516312 6.1:+46270860 MS.gene021281:CDS
CAAAGATAACCTAGCAGCCA+AGG 0.517140 6.1:-46271009 None:intergenic
AATATTGGATCTAATGAAAG+TGG 0.519493 6.1:+46272938 MS.gene021281:CDS
ATTCTGGAGCTATGGAAGAA+TGG 0.524311 6.1:+46270760 MS.gene021281:CDS
GGTTAGAGATGGAGATTCCA+TGG 0.524678 6.1:+46269496 None:intergenic
AGAGTTAATCCAGAAACTAA+AGG 0.527183 6.1:+46271761 MS.gene021281:CDS
ACAACATCTGCAAATAAAGT+AGG 0.528162 6.1:+46272622 MS.gene021281:CDS
TGTTATATTTCACAGAGCAA+TGG 0.528771 6.1:+46270962 MS.gene021281:intron
AAGGAATTTGGGGATGAAGA+AGG 0.535778 6.1:+46273319 MS.gene021281:intron
TAATGACATTTACACGAACT+GGG 0.538618 6.1:-46269584 None:intergenic
TTCTTCAGCAAAGGCCGCCA+AGG 0.539397 6.1:+46271063 MS.gene021281:CDS
ATTAGATCCAATATTCGAGA+AGG 0.541398 6.1:-46272930 None:intergenic
GGATTAACTCTTCAATGCCA+GGG 0.542136 6.1:-46271749 None:intergenic
TACTGCTATGCACTTCATCA+TGG 0.553245 6.1:-46272387 None:intergenic
CTGTTGCAGACTGGACTGCT+AGG 0.554912 6.1:+46272030 MS.gene021281:CDS
GCTCGTCAATTCCTTCATCC+AGG 0.561151 6.1:-46270819 None:intergenic
AGCACTGTGTGCCTGGATGA+AGG 0.562491 6.1:+46270808 MS.gene021281:CDS
GGTAGATTATAACCTGAAGA+TGG 0.564115 6.1:-46272989 None:intergenic
ACCACAGTTACCAAATGTGA+AGG 0.574268 6.1:+46272576 MS.gene021281:CDS
CGGTCTCAATCATACCTTGG+CGG 0.574527 6.1:-46271077 None:intergenic
GTGAAGGCAGTGGAGCAACT+AGG 0.575398 6.1:+46272891 MS.gene021281:CDS
AGCACTGTGTGCATTGATGA+AGG 0.592504 6.1:+46272002 MS.gene021281:CDS
ACCTTCACATTTGGTAACTG+TGG 0.592713 6.1:-46272577 None:intergenic
AGCATGTATATCTGATCTCA+GGG 0.595432 6.1:+46271793 MS.gene021281:CDS
ATTGGATCTAATGAAAGTGG+AGG 0.613074 6.1:+46272941 MS.gene021281:CDS
TGATGCAGTGTGCTTTGATG+TGG 0.622176 6.1:+46270783 MS.gene021281:CDS
TGATGCAGTGTGCTTTGATG+TGG 0.622176 6.1:+46271977 MS.gene021281:CDS
GGGCTTGACAAGGCATAATG+TGG 0.631155 6.1:+46272962 MS.gene021281:CDS
GTTGAAAATGAAGGAATTTG+GGG 0.631709 6.1:+46273309 MS.gene021281:intron
TTGGATCTAATGAAAGTGGA+GGG 0.637148 6.1:+46272942 MS.gene021281:CDS
TGAAAGTGGAGGGCTTGACA+AGG 0.644049 6.1:+46272952 MS.gene021281:CDS
TGTGTGCATTGATGAAGGAA+AGG 0.646201 6.1:+46272007 MS.gene021281:CDS
ATATTTCACAGAGCAATGGG+TGG 0.674142 6.1:+46270966 MS.gene021281:intron
GATTAACTCTTCAATGCCAG+GGG 0.679834 6.1:-46271748 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GAATTTTTTTTTTTTGATAA+AGG + chr6.1:46272069-46272088 MS.gene021281:intron 10.0%
!!! TGATATTTTTTTATTATCTA+TGG + chr6.1:46269802-46269821 MS.gene021281:intron 10.0%
!!! TTTATATTTTTGAATTTCTT+TGG + chr6.1:46272093-46272112 MS.gene021281:intron 10.0%
!! CATAAAAAACTATTATGTTA+AGG + chr6.1:46270220-46270239 MS.gene021281:intron 15.0%
!!! AAAAACTACTACAATTTTTA+TGG + chr6.1:46271946-46271965 MS.gene021281:intron 15.0%
!!! AGTTGTAATGATTATTTTTT+TGG + chr6.1:46271848-46271867 MS.gene021281:intron 15.0%
!!! TGATATATTTAATTTTACCA+TGG + chr6.1:46270466-46270485 MS.gene021281:intron 15.0%
!!! TTAAGAATTTTATAAACCTT+TGG - chr6.1:46269778-46269797 None:intergenic 15.0%
!!! TTTATGTTTTTGAATTTCTT+TGG + chr6.1:46270930-46270949 MS.gene021281:intron 15.0%
!! AAAACTGTATTAAGAAAATC+AGG - chr6.1:46272822-46272841 None:intergenic 20.0%
!! AAATAACGATATACGAAAAT+TGG - chr6.1:46272442-46272461 None:intergenic 20.0%
!! TAAATATGCTTGACATATAT+AGG + chr6.1:46273210-46273229 MS.gene021281:intron 20.0%
!! TACTGTTATAGTATATTCTA+GGG - chr6.1:46271527-46271546 None:intergenic 20.0%
!! TGATATTCATATATCTTCAT+AGG + chr6.1:46273072-46273091 MS.gene021281:intron 20.0%
!!! AAAATATCATTAGAAGTGTA+GGG - chr6.1:46271321-46271340 None:intergenic 20.0%
!!! AAGTGTATTTTTAGTATCAA+TGG - chr6.1:46270577-46270596 None:intergenic 20.0%
!!! ATTAATTACAGTTTTGAATG+AGG - chr6.1:46273045-46273064 None:intergenic 20.0%
!!! CATATCCTTTTAAAATTAGT+GGG + chr6.1:46272488-46272507 MS.gene021281:intron 20.0%
!!! CTAATCAAACTAGTTTTATT+TGG + chr6.1:46272511-46272530 MS.gene021281:intron 20.0%
!!! GACAACATGATTTTAATTAA+AGG - chr6.1:46270262-46270281 None:intergenic 20.0%
!!! TAAAATATCATTAGAAGTGT+AGG - chr6.1:46271322-46271341 None:intergenic 20.0%
!!! TGATTTTCTTAATACAGTTT+TGG + chr6.1:46272821-46272840 MS.gene021281:intron 20.0%
! AACATTATGAGAAGAATGAA+TGG - chr6.1:46272711-46272730 None:intergenic 25.0%
! AATATTGGATCTAATGAAAG+TGG + chr6.1:46272938-46272957 MS.gene021281:CDS 25.0%
! AGAAAATAAAGTAGGTAGTT+AGG - chr6.1:46271631-46271650 None:intergenic 25.0%
! AGAGTAATTCTCAATGTTAT+TGG + chr6.1:46270682-46270701 MS.gene021281:intron 25.0%
! AGGTAATGAATACTAACATA+AGG + chr6.1:46273092-46273111 MS.gene021281:intron 25.0%
! ATAACCATCCAAAACTTTAA+AGG + chr6.1:46271365-46271384 MS.gene021281:intron 25.0%
! ATATAAATGTTGGAGTTTGT+GGG + chr6.1:46273287-46273306 MS.gene021281:intron 25.0%
! ATCAAAACCAAATCTCAAAA+AGG + chr6.1:46269635-46269654 MS.gene021281:CDS 25.0%
! CTACTGTTATAGTATATTCT+AGG - chr6.1:46271528-46271547 None:intergenic 25.0%
! GAATATAACCTTATACAACA+TGG - chr6.1:46272773-46272792 None:intergenic 25.0%
! GGGAATTTGTATATAAATGT+TGG + chr6.1:46273277-46273296 MS.gene021281:intron 25.0%
! TAACCATCCAAAACTTTAAA+GGG + chr6.1:46271366-46271385 MS.gene021281:intron 25.0%
! TATATAAATGTTGGAGTTTG+TGG + chr6.1:46273286-46273305 MS.gene021281:intron 25.0%
! TATGATTCTCTTTAATATGC+AGG + chr6.1:46271721-46271740 MS.gene021281:intron 25.0%
! TCAAAACCAAATCTCAAAAA+GGG + chr6.1:46269636-46269655 MS.gene021281:CDS 25.0%
! TCTTATGCATTCTATATTTC+TGG - chr6.1:46273139-46273158 None:intergenic 25.0%
! TGGTAGATAGAGAAATATAA+TGG + chr6.1:46270486-46270505 MS.gene021281:intron 25.0%
! TTATATTTCTCTATCTACCA+TGG - chr6.1:46270486-46270505 None:intergenic 25.0%
! TTCGTCAAATAATCAATGTA+TGG + chr6.1:46271820-46271839 MS.gene021281:intron 25.0%
! TTGTTTATCCATGTTGTATA+AGG + chr6.1:46272762-46272781 MS.gene021281:intron 25.0%
! TTTAAAAGGATATGGTCTAT+CGG - chr6.1:46272482-46272501 None:intergenic 25.0%
!! ATTAGCCCACTAATTTTAAA+AGG - chr6.1:46272496-46272515 None:intergenic 25.0%
!! ATTTGTTGAATTTCATCATG+GGG + chr6.1:46270321-46270340 MS.gene021281:intron 25.0%
!! CTACAATTTTTATGGAAGAA+TGG + chr6.1:46271954-46271973 MS.gene021281:intron 25.0%
!! GAATTTTATAAACCTTTGGA+AGG - chr6.1:46269774-46269793 None:intergenic 25.0%
!! TATATCGTTATTTCATGCTT+TGG + chr6.1:46272449-46272468 MS.gene021281:intron 25.0%
!! TTGAAAATTTTCTTCAGCAA+AGG + chr6.1:46271054-46271073 MS.gene021281:CDS 25.0%
!!! AGATTTGGTTTTGATTCAAA+CGG - chr6.1:46269630-46269649 None:intergenic 25.0%
!!! CCACTAATTTTAAAAGGATA+TGG - chr6.1:46272490-46272509 None:intergenic 25.0%
!!! CCATATCCTTTTAAAATTAG+TGG + chr6.1:46272487-46272506 MS.gene021281:intron 25.0%
!!! GATTTGTTGAATTTCATCAT+GGG + chr6.1:46270320-46270339 MS.gene021281:intron 25.0%
!!! TGAGGTATTGAAATAGTTTT+TGG - chr6.1:46273027-46273046 None:intergenic 25.0%
!!! TGATTTGTTGAATTTCATCA+TGG + chr6.1:46270319-46270338 MS.gene021281:intron 25.0%
!!! TTAATACAGTTTTGGTACTT+TGG + chr6.1:46272829-46272848 MS.gene021281:intron 25.0%
AAATTGATGAATGGTGTAGA+GGG + chr6.1:46272237-46272256 MS.gene021281:intron 30.0%
AACATGACATGGAAAATATG+GGG + chr6.1:46272262-46272281 MS.gene021281:intron 30.0%
ACAACATCTGCAAATAAAGT+AGG + chr6.1:46272622-46272641 MS.gene021281:CDS 30.0%
AGAGTTAATCCAGAAACTAA+AGG + chr6.1:46271761-46271780 MS.gene021281:CDS 30.0%
AGTGAGAAGACAAAAAATGT+TGG - chr6.1:46269531-46269550 None:intergenic 30.0%
ATCTCTTGAACCTTGTAAAT+GGG + chr6.1:46273252-46273271 MS.gene021281:intron 30.0%
ATGAACATATTGTCATCTGA+AGG + chr6.1:46270610-46270629 MS.gene021281:intron 30.0%
ATTAGATCCAATATTCGAGA+AGG - chr6.1:46272933-46272952 None:intergenic 30.0%
CAATGAACAGTGTGAAATAA+CGG - chr6.1:46272745-46272764 None:intergenic 30.0%
CAGTTAGATTGCATTTACAA+GGG - chr6.1:46271464-46271483 None:intergenic 30.0%
CTATTATGTTAAGGTCTAGA+TGG + chr6.1:46270229-46270248 MS.gene021281:intron 30.0%
GAAAGCAGAGAAAATAAAGT+AGG - chr6.1:46271639-46271658 None:intergenic 30.0%
GAACATGACATGGAAAATAT+GGG + chr6.1:46272261-46272280 MS.gene021281:intron 30.0%
GCAAAGTTAGATTGTTCAAA+TGG + chr6.1:46270886-46270905 MS.gene021281:intron 30.0%
GGAAACTTGAAATTGATGAA+TGG + chr6.1:46272228-46272247 MS.gene021281:intron 30.0%
GGTTGAAAATGAAGGAATTT+GGG + chr6.1:46273308-46273327 MS.gene021281:intron 30.0%
GTTATATTTCACAGAGCAAT+GGG + chr6.1:46270963-46270982 MS.gene021281:intron 30.0%
GTTGAAAATGAAGGAATTTG+GGG + chr6.1:46273309-46273328 MS.gene021281:intron 30.0%
TAAATGCAATCTAACTGGTA+AGG + chr6.1:46271467-46271486 MS.gene021281:intron 30.0%
TAATGACATTTACACGAACT+GGG - chr6.1:46269587-46269606 None:intergenic 30.0%
TATCCATCATCAAAACAACA+CGG - chr6.1:46270737-46270756 None:intergenic 30.0%
TATCTCTTGAACCTTGTAAA+TGG + chr6.1:46273251-46273270 MS.gene021281:intron 30.0%
TCAAAAATTGAAGAAGTCAC+CGG - chr6.1:46272335-46272354 None:intergenic 30.0%
TGAACATATTGTCATCTGAA+GGG + chr6.1:46270611-46270630 MS.gene021281:intron 30.0%
TGTTATATTTCACAGAGCAA+TGG + chr6.1:46270962-46270981 MS.gene021281:intron 30.0%
TTTGTTGAATTTCATCATGG+GGG + chr6.1:46270322-46270341 MS.gene021281:intron 30.0%
! AAAGTCTAAAGCAAGAGAAA+TGG - chr6.1:46271243-46271262 None:intergenic 30.0%
! AACCATCCAAAACTTTAAAG+GGG + chr6.1:46271367-46271386 MS.gene021281:intron 30.0%
! AAGTCTAAAGCAAGAGAAAT+GGG - chr6.1:46271242-46271261 None:intergenic 30.0%
! ATTTTTGTTCGATACCTCTA+TGG + chr6.1:46272207-46272226 MS.gene021281:intron 30.0%
! GAAGTTTTCTCCTTTGATTA+TGG + chr6.1:46269698-46269717 MS.gene021281:intron 30.0%
! TTGAATTTTCACAGAGCAAT+GGG + chr6.1:46272145-46272164 MS.gene021281:intron 30.0%
! TTGTTTAGAACCTTCACATT+TGG - chr6.1:46272589-46272608 None:intergenic 30.0%
!! AAATAGTTTTTGGAAACCGT+GGG - chr6.1:46273017-46273036 None:intergenic 30.0%
!! AGTTGGTCATTTTGAGAATA+CGG + chr6.1:46269746-46269765 MS.gene021281:intron 30.0%
!! ATTGGCTTCTATGTTTTCTT+GGG + chr6.1:46270700-46270719 MS.gene021281:intron 30.0%
!! CTTGCTTTAGACTTTTAACT+TGG + chr6.1:46271248-46271267 MS.gene021281:intron 30.0%
!! TCAATTTCAAGTTTCCATAG+AGG - chr6.1:46272224-46272243 None:intergenic 30.0%
!! TTGATGATGGATAGAAATTC+TGG + chr6.1:46270744-46270763 MS.gene021281:intron 30.0%
!!! AAAACACCCCTTTAAAGTTT+TGG - chr6.1:46271376-46271395 None:intergenic 30.0%
!!! ATTTTCAAGTTGAGACATAG+AGG - chr6.1:46271042-46271061 None:intergenic 30.0%
!!! GGAAATTCTGTTTTGAGAAA+TGG + chr6.1:46270907-46270926 MS.gene021281:intron 30.0%
!!! TATTGGCTTCTATGTTTTCT+TGG + chr6.1:46270699-46270718 MS.gene021281:intron 30.0%
!!! TTTTCAAGTTGAGACATAGA+GGG - chr6.1:46271041-46271060 None:intergenic 30.0%
AAATTCCCAACCCATTTACA+AGG - chr6.1:46273265-46273284 None:intergenic 35.0%
AAATTGGGGTTCAAACAAAG+TGG - chr6.1:46270045-46270064 None:intergenic 35.0%
AAGCATGTATATCTGATCTC+AGG + chr6.1:46271792-46271811 MS.gene021281:CDS 35.0%
AATTGATGAATGGTGTAGAG+GGG + chr6.1:46272238-46272257 MS.gene021281:intron 35.0%
ACACTGAAAACAAAATCAGC+CGG - chr6.1:46271100-46271119 None:intergenic 35.0%
ACTGTTGGAAATTGACAAGT+TGG + chr6.1:46269729-46269748 MS.gene021281:intron 35.0%
AGCATGTATATCTGATCTCA+GGG + chr6.1:46271793-46271812 MS.gene021281:CDS 35.0%
AGTGCATAGCAGTAAGATAT+TGG + chr6.1:46272396-46272415 MS.gene021281:intron 35.0%
ATATAGTGTCCACTAGAAAG+CGG + chr6.1:46269901-46269920 MS.gene021281:intron 35.0%
ATCCAGAAACTAAAGGCTAA+TGG + chr6.1:46271768-46271787 MS.gene021281:CDS 35.0%
ATCGGAAATGGCTAAATACA+AGG + chr6.1:46273183-46273202 MS.gene021281:intron 35.0%
ATTGGATCTAATGAAAGTGG+AGG + chr6.1:46272941-46272960 MS.gene021281:CDS 35.0%
CAAAAAATTTGTGAAGGCAG+TGG + chr6.1:46272881-46272900 MS.gene021281:CDS 35.0%
CAATTATATCCGCTTTCTAG+TGG - chr6.1:46269913-46269932 None:intergenic 35.0%
CCAGTTAGATTGCATTTACA+AGG - chr6.1:46271465-46271484 None:intergenic 35.0%
CCTTGTAAATGCAATCTAAC+TGG + chr6.1:46271462-46271481 MS.gene021281:intron 35.0%
CGGACAATGTCATTATTGTT+AGG + chr6.1:46269952-46269971 MS.gene021281:intron 35.0%
CTGGTCAATTCAGACATATT+TGG + chr6.1:46271689-46271708 MS.gene021281:intron 35.0%
GAAATTGATGAATGGTGTAG+AGG + chr6.1:46272236-46272255 MS.gene021281:intron 35.0%
GAACATATTGTCATCTGAAG+GGG + chr6.1:46270612-46270631 MS.gene021281:intron 35.0%
GCTGCACAAAAAATTTGTGA+AGG + chr6.1:46272875-46272894 MS.gene021281:CDS 35.0%
GGAACATGACATGGAAAATA+TGG + chr6.1:46272260-46272279 MS.gene021281:intron 35.0%
GGGTTGAAAATGAAGGAATT+TGG + chr6.1:46273307-46273326 MS.gene021281:intron 35.0%
GGTACGTTTGGATTTCAAAT+TGG + chr6.1:46269657-46269676 MS.gene021281:intron 35.0%
GGTAGATTATAACCTGAAGA+TGG - chr6.1:46272992-46273011 None:intergenic 35.0%
GGTCTAGCAAAAAAATAACC+TGG - chr6.1:46271561-46271580 None:intergenic 35.0%
GTAATGACATTTACACGAAC+TGG - chr6.1:46269588-46269607 None:intergenic 35.0%
TAAAGTAGGTAGTTAGGCTT+TGG - chr6.1:46271625-46271644 None:intergenic 35.0%
TCAATGTAGCTTCATGACTT+AGG + chr6.1:46271156-46271175 MS.gene021281:intron 35.0%
TTGGATCTAATGAAAGTGGA+GGG + chr6.1:46272942-46272961 MS.gene021281:CDS 35.0%
! AACAGTGTGAAATAACGGAA+CGG - chr6.1:46272740-46272759 None:intergenic 35.0%
! AATCTCAAAAAGGGTACGTT+TGG + chr6.1:46269645-46269664 MS.gene021281:intron 35.0%
! ACTTTGTTTGAACCCCAATT+TGG + chr6.1:46270044-46270063 MS.gene021281:intron 35.0%
! AGTCTAAAGCAAGAGAAATG+GGG - chr6.1:46271241-46271260 None:intergenic 35.0%
! AGTTTGTGGGTTGAAAATGA+AGG + chr6.1:46273300-46273319 MS.gene021281:intron 35.0%
! ATGGAAGCTTTGATCAGTTA+TGG + chr6.1:46269555-46269574 MS.gene021281:CDS 35.0%
! GTTGAATTTTCACAGAGCAA+TGG + chr6.1:46272144-46272163 MS.gene021281:intron 35.0%
! TGGAAGCTTTGATCAGTTAT+GGG + chr6.1:46269556-46269575 MS.gene021281:CDS 35.0%
! TTGAACCTTGTAAATGGGTT+GGG + chr6.1:46273257-46273276 MS.gene021281:intron 35.0%
! TTTTGTCTTCTCACTGTACA+TGG + chr6.1:46269536-46269555 MS.gene021281:CDS 35.0%
! TTTTTGTCTCGTCAGAGTTT+TGG - chr6.1:46271586-46271605 None:intergenic 35.0%
!! AGTTAAGGAGTGGATTGATA+AGG + chr6.1:46270087-46270106 MS.gene021281:intron 35.0%
!! GAAATAGTTTTTGGAAACCG+TGG - chr6.1:46273018-46273037 None:intergenic 35.0%
!! GTAATCACGTTAAGTTGATC+AGG + chr6.1:46271203-46271222 MS.gene021281:intron 35.0%
!!! AAAGGGGTGTTTTGATTCAA+CGG + chr6.1:46271383-46271402 MS.gene021281:intron 35.0%
!!! AACGTACCCTTTTTGAGATT+TGG - chr6.1:46269645-46269664 None:intergenic 35.0%
!!! ACAAATTTTTTGTGCAGCTC+TGG - chr6.1:46272873-46272892 None:intergenic 35.0%
!!! TTTCCGTGTTGTTTTGATGA+TGG + chr6.1:46270731-46270750 MS.gene021281:intron 35.0%
AAGGAATTTGGGGATGAAGA+AGG + chr6.1:46273319-46273338 MS.gene021281:intron 40.0%
AAGGCAGCATACTATAGACT+TGG + chr6.1:46271486-46271505 MS.gene021281:intron 40.0%
AATGTTGGATCTACGATCCA+TGG - chr6.1:46269516-46269535 None:intergenic 40.0%
ACCACAGTTACCAAATGTGA+AGG + chr6.1:46272576-46272595 MS.gene021281:CDS 40.0%
ATATTTCACAGAGCAATGGG+TGG + chr6.1:46270966-46270985 MS.gene021281:intron 40.0%
ATGTCTGAATTGACCAGTTC+AGG - chr6.1:46271686-46271705 None:intergenic 40.0%
ATTGATGAATGGTGTAGAGG+GGG + chr6.1:46272239-46272258 MS.gene021281:intron 40.0%
CGCTATTCCTTCTCGAATAT+TGG + chr6.1:46272923-46272942 MS.gene021281:CDS 40.0%
CGGAGAATCACAGTTAAATG+TGG + chr6.1:46270157-46270176 MS.gene021281:intron 40.0%
CTTGAACCTTGTAAATGGGT+TGG + chr6.1:46273256-46273275 MS.gene021281:intron 40.0%
GAGACATATCTTACCAAAGC+AGG + chr6.1:46273157-46273176 MS.gene021281:intron 40.0%
GATTAACTCTTCAATGCCAG+GGG - chr6.1:46271751-46271770 None:intergenic 40.0%
GCTAGGTTAGATTGTTCAGA+TGG + chr6.1:46272047-46272066 MS.gene021281:intron 40.0%
GGATTAACTCTTCAATGCCA+GGG - chr6.1:46271752-46271771 None:intergenic 40.0%
GGTTATAATCTACCTTCCCA+CGG + chr6.1:46272998-46273017 MS.gene021281:intron 40.0%
TACTGCTATGCACTTCATCA+TGG - chr6.1:46272390-46272409 None:intergenic 40.0%
TCTCCTATTGTATCCTGAAC+TGG + chr6.1:46271670-46271689 MS.gene021281:intron 40.0%
TCTTACCAAAGCAGGATGAT+CGG + chr6.1:46273165-46273184 MS.gene021281:intron 40.0%
TGACCAGTTCAGGATACAAT+AGG - chr6.1:46271676-46271695 None:intergenic 40.0%
TGGATTAACTCTTCAATGCC+AGG - chr6.1:46271753-46271772 None:intergenic 40.0%
TGTCGCGGTCTTTGATATTA+CGG + chr6.1:46270137-46270156 MS.gene021281:intron 40.0%
TGTTAAGGTCTAGATGGTCA+TGG + chr6.1:46270235-46270254 MS.gene021281:intron 40.0%
! AATTTTCACAGAGCAATGGG+TGG + chr6.1:46272148-46272167 MS.gene021281:intron 40.0%
! ACCTTCACATTTGGTAACTG+TGG - chr6.1:46272580-46272599 None:intergenic 40.0%
! GGAGTATTTCGCTTTCGATT+TGG + chr6.1:46271177-46271196 MS.gene021281:intron 40.0%
! GTCTAAAGCAAGAGAAATGG+GGG - chr6.1:46271240-46271259 None:intergenic 40.0%
! TGTGTGCATTGATGAAGGAA+AGG + chr6.1:46272007-46272026 MS.gene021281:CDS 40.0%
!! AACAGTAGCTTTGTTGAACC+AGG + chr6.1:46271540-46271559 MS.gene021281:intron 40.0%
!! AATTTCATCATGGGGGTGTT+TGG + chr6.1:46270329-46270348 MS.gene021281:intron 40.0%
!! AGTTTTGGTACTTTGGTCTC+AGG + chr6.1:46272836-46272855 MS.gene021281:intron 40.0%
!! ATTCTGGAGCTATGGAAGAA+TGG + chr6.1:46270760-46270779 MS.gene021281:CDS 40.0%
!! CTTGCTGCAAGTTTTGTAAC+CGG + chr6.1:46272313-46272332 MS.gene021281:intron 40.0%
!! GGATAGAAATTCTGGAGCTA+TGG + chr6.1:46270752-46270771 MS.gene021281:intron 40.0%
!! TAAGGAGTGGATTGATAAGG+AGG + chr6.1:46270090-46270109 MS.gene021281:intron 40.0%
!! TGCCATTAGCCTTTAGTTTC+TGG - chr6.1:46271773-46271792 None:intergenic 40.0%
!! TGTTCCTTTTGAGGAAGCAT+TGG + chr6.1:46272174-46272193 MS.gene021281:CDS 40.0%
!! TTTAACTTGGCAGAGCTGAA+AGG + chr6.1:46271261-46271280 MS.gene021281:intron 40.0%
!!! ACGAGCTTGCTGAATTTTGT+GGG + chr6.1:46270836-46270855 MS.gene021281:CDS 40.0%
!!! CACCCCTTTAAAGTTTTGGA+TGG - chr6.1:46271372-46271391 None:intergenic 40.0%
ATTATGGCTGCTGCTACTGT+TGG + chr6.1:46269714-46269733 MS.gene021281:intron 45.0%
CAAACCACCTCTCCAAATTG+GGG - chr6.1:46270059-46270078 None:intergenic 45.0%
CAAAGATAACCTAGCAGCCA+AGG - chr6.1:46271012-46271031 None:intergenic 45.0%
CAAAGCAGGATGATCGGAAA+TGG + chr6.1:46273171-46273190 MS.gene021281:intron 45.0%
CATTTCCGATCATCCTGCTT+TGG - chr6.1:46273173-46273192 None:intergenic 45.0%
CCAAACCACCTCTCCAAATT+GGG - chr6.1:46270060-46270079 None:intergenic 45.0%
CCAATTTGGAGAGGTGGTTT+GGG + chr6.1:46270058-46270077 MS.gene021281:intron 45.0%
CGAGGTCTGAATTCAAACCA+GGG - chr6.1:46269991-46270010 None:intergenic 45.0%
CTGGAAAAGCTGTTGCAGAA+TGG + chr6.1:46270860-46270879 MS.gene021281:CDS 45.0%
GAGAATACGGTTCCTTCCAA+AGG + chr6.1:46269759-46269778 MS.gene021281:intron 45.0%
GTAGCAGCAGCCATAATCAA+AGG - chr6.1:46269711-46269730 None:intergenic 45.0%
GTCCGTAAGACACAACTCAA+CGG + chr6.1:46269932-46269951 MS.gene021281:intron 45.0%
GTTTGAACCCCAATTTGGAG+AGG + chr6.1:46270049-46270068 MS.gene021281:intron 45.0%
TAATGTGGCAAGCCATCTTC+AGG + chr6.1:46272977-46272996 MS.gene021281:CDS 45.0%
TACTTTGGTCTCAGGTAGAC+TGG + chr6.1:46272844-46272863 MS.gene021281:intron 45.0%
TAGGCTAAACATGTTCACCC+TGG + chr6.1:46269971-46269990 MS.gene021281:intron 45.0%
TGATGCAGTGTGCTTTGATG+TGG + chr6.1:46270783-46270802 MS.gene021281:CDS 45.0%
TTAATATGCAGGCTTTCCCC+TGG + chr6.1:46271732-46271751 MS.gene021281:intron 45.0%
! AGCACTGTGTGCATTGATGA+AGG + chr6.1:46272002-46272021 MS.gene021281:CDS 45.0%
! GTCCGTTGAGTTGTGTCTTA+CGG - chr6.1:46269937-46269956 None:intergenic 45.0%
!! AGTTTTTGGAAACCGTGGGA+AGG - chr6.1:46273013-46273032 None:intergenic 45.0%
!! TGTTCCTTTTGAGGAAGCCT+TGG + chr6.1:46270992-46271011 MS.gene021281:CDS 45.0%
!!! CGAGCTTGCTGAATTTTGTG+GGG + chr6.1:46270837-46270856 MS.gene021281:CDS 45.0%
!!! GACGAGCTTGCTGAATTTTG+TGG + chr6.1:46270835-46270854 MS.gene021281:CDS 45.0%
!! TAAAATTAAATATATCAAAA+CGG - chr6.1:46270463-46270482 None:intergenic 5.0%
!!! AATTTTTTTTTTTTGATAAA+GGG + chr6.1:46272070-46272089 MS.gene021281:intron 5.0%
AAGGAAAGGCTGTTGCAGAC+TGG + chr6.1:46272021-46272040 MS.gene021281:CDS 50.0%
ACCGCAATGCTACGCAATTG+AGG - chr6.1:46270192-46270211 None:intergenic 50.0%
AGCAAGAGAAATGGGGGAGT+AGG - chr6.1:46271234-46271253 None:intergenic 50.0%
AGCCGGTCTCAATCATACCT+TGG - chr6.1:46271083-46271102 None:intergenic 50.0%
CCCAAACCACCTCTCCAAAT+TGG - chr6.1:46270061-46270080 None:intergenic 50.0%
CCCAATTTGGAGAGGTGGTT+TGG + chr6.1:46270057-46270076 MS.gene021281:intron 50.0%
CGCCAAGGTATGATTGAGAC+CGG + chr6.1:46271078-46271097 MS.gene021281:intron 50.0%
CGGTCTCAATCATACCTTGG+CGG - chr6.1:46271080-46271099 None:intergenic 50.0%
GCAGCCAATGCTTCCTCAAA+AGG - chr6.1:46272181-46272200 None:intergenic 50.0%
GCAGTTGTGTGTCGGAGTTT+AGG + chr6.1:46270010-46270029 MS.gene021281:intron 50.0%
GCCTCAATTGCGTAGCATTG+CGG + chr6.1:46270188-46270207 MS.gene021281:intron 50.0%
GCGAGGTCTGAATTCAAACC+AGG - chr6.1:46269992-46270011 None:intergenic 50.0%
GCTCGTCAATTCCTTCATCC+AGG - chr6.1:46270822-46270841 None:intergenic 50.0%
GGGCTTGACAAGGCATAATG+TGG + chr6.1:46272962-46272981 MS.gene021281:CDS 50.0%
GGTCGCATAGGTTTGAGTAG+CGG + chr6.1:46271431-46271450 MS.gene021281:intron 50.0%
GTTGCTACTGCGTGACTAAG+AGG + chr6.1:46271410-46271429 MS.gene021281:intron 50.0%
GTTGTGTGTCGGAGTTTAGG+TGG + chr6.1:46270013-46270032 MS.gene021281:intron 50.0%
TAACGTCTGCTGTCATGTCG+CGG + chr6.1:46270122-46270141 MS.gene021281:intron 50.0%
TGAAAGTGGAGGGCTTGACA+AGG + chr6.1:46272952-46272971 MS.gene021281:CDS 50.0%
TGAACCCCAATTTGGAGAGG+TGG + chr6.1:46270052-46270071 MS.gene021281:intron 50.0%
TGTAGAGGGGGAACATGACA+TGG + chr6.1:46272251-46272270 MS.gene021281:intron 50.0%
! ATTTGGAGAGGTGGTTTGGG+TGG + chr6.1:46270061-46270080 MS.gene021281:intron 50.0%
! CTTGCTGAATTTTGTGGGGC+TGG + chr6.1:46270841-46270860 MS.gene021281:CDS 50.0%
! TTTGGAGAGGTGGTTTGGGT+GGG + chr6.1:46270062-46270081 MS.gene021281:intron 50.0%
!! ATGGGGGTGTTTGGAGAAGT+GGG + chr6.1:46270338-46270357 MS.gene021281:intron 50.0%
!! GGGTGGTTCTGTTCCTTTTG+AGG + chr6.1:46270983-46271002 MS.gene021281:CDS 50.0%
!! TGTCTCGTCAGAGTTTTGGC+TGG - chr6.1:46271582-46271601 None:intergenic 50.0%
!! TTGAGGAAGCATTGGCTGCT+AGG + chr6.1:46272182-46272201 MS.gene021281:CDS 50.0%
AACTCCGACACACAACTGCG+AGG - chr6.1:46270009-46270028 None:intergenic 55.0%
AGCACTGTGTGCCTGGATGA+AGG + chr6.1:46270808-46270827 MS.gene021281:CDS 55.0%
CAGACCTCGCAGTTGTGTGT+CGG + chr6.1:46270002-46270021 MS.gene021281:intron 55.0%
CTGTTGCAGACTGGACTGCT+AGG + chr6.1:46272030-46272049 MS.gene021281:CDS 55.0%
GCAGCCAAGGCTTCCTCAAA+AGG - chr6.1:46270999-46271018 None:intergenic 55.0%
GCGTGACTAAGAGGTCGCAT+AGG + chr6.1:46271419-46271438 MS.gene021281:intron 55.0%
GTGAAGGCAGTGGAGCAACT+AGG + chr6.1:46272891-46272910 MS.gene021281:CDS 55.0%
TGTGGATAGCACTGTGTGCC+TGG + chr6.1:46270801-46270820 MS.gene021281:CDS 55.0%
TTCTTCAGCAAAGGCCGCCA+AGG + chr6.1:46271063-46271082 MS.gene021281:CDS 55.0%
TTGAGGAAGCCTTGGCTGCT+AGG + chr6.1:46271000-46271019 MS.gene021281:CDS 55.0%
! TGGTTTGGGTGGGGGAGTTA+AGG + chr6.1:46270072-46270091 MS.gene021281:intron 55.0%
! TTGGAGAGGTGGTTTGGGTG+GGG + chr6.1:46270063-46270082 MS.gene021281:intron 55.0%
!! CATGGGGGTGTTTGGAGAAG+TGG + chr6.1:46270337-46270356 MS.gene021281:intron 55.0%
TGGGTGGGGGAGTTAAGGAG+TGG + chr6.1:46270077-46270096 MS.gene021281:intron 60.0%
! TGGAGAGGTGGTTTGGGTGG+GGG + chr6.1:46270064-46270083 MS.gene021281:intron 60.0%


Chromosome Type Strat End Strand Name
chr6.1 gene 46269504 46273345 46269504 ID=MS.gene021281
chr6.1 mRNA 46269504 46273345 46269504 ID=MS.gene021281.t1;Parent=MS.gene021281
chr6.1 exon 46269504 46269657 46269504 ID=MS.gene021281.t1.exon1;Parent=MS.gene021281.t1
chr6.1 CDS 46269504 46269657 46269504 ID=cds.MS.gene021281.t1;Parent=MS.gene021281.t1
chr6.1 exon 46270758 46270890 46270758 ID=MS.gene021281.t1.exon2;Parent=MS.gene021281.t1
chr6.1 CDS 46270758 46270890 46270758 ID=cds.MS.gene021281.t1;Parent=MS.gene021281.t1
chr6.1 exon 46270977 46271084 46270977 ID=MS.gene021281.t1.exon3;Parent=MS.gene021281.t1
chr6.1 CDS 46270977 46271084 46270977 ID=cds.MS.gene021281.t1;Parent=MS.gene021281.t1
chr6.1 exon 46271743 46271836 46271743 ID=MS.gene021281.t1.exon4;Parent=MS.gene021281.t1
chr6.1 CDS 46271743 46271836 46271743 ID=cds.MS.gene021281.t1;Parent=MS.gene021281.t1
chr6.1 exon 46271972 46272051 46271972 ID=MS.gene021281.t1.exon5;Parent=MS.gene021281.t1
chr6.1 CDS 46271972 46272051 46271972 ID=cds.MS.gene021281.t1;Parent=MS.gene021281.t1
chr6.1 exon 46272159 46272203 46272159 ID=MS.gene021281.t1.exon6;Parent=MS.gene021281.t1
chr6.1 CDS 46272159 46272203 46272159 ID=cds.MS.gene021281.t1;Parent=MS.gene021281.t1
chr6.1 exon 46272360 46272406 46272360 ID=MS.gene021281.t1.exon7;Parent=MS.gene021281.t1
chr6.1 CDS 46272360 46272406 46272360 ID=cds.MS.gene021281.t1;Parent=MS.gene021281.t1
chr6.1 exon 46272542 46272693 46272542 ID=MS.gene021281.t1.exon8;Parent=MS.gene021281.t1
chr6.1 CDS 46272542 46272693 46272542 ID=cds.MS.gene021281.t1;Parent=MS.gene021281.t1
chr6.1 exon 46272858 46272998 46272858 ID=MS.gene021281.t1.exon9;Parent=MS.gene021281.t1
chr6.1 CDS 46272858 46272998 46272858 ID=cds.MS.gene021281.t1;Parent=MS.gene021281.t1
chr6.1 exon 46273322 46273345 46273322 ID=MS.gene021281.t1.exon10;Parent=MS.gene021281.t1
chr6.1 CDS 46273322 46273345 46273322 ID=cds.MS.gene021281.t1;Parent=MS.gene021281.t1
Gene Sequence

>MS.gene021281

ATGGAGATTCCATGGATCGTAGATCCAACATTTTTTGTCTTCTCACTGTACATGGAAGCTTTGATCAGTTATGGGATCAACCCAGTTCGTGTAAATGTCATTACAAAGCAGCGATCTTGTTTTCCGTTTGAATCAAAACCAAATCTCAAAAAGGGTACGTTTGGATTTCAAATTGGAGTCGTGAACAAGAAGAAGAAGTTTTCTCCTTTGATTATGGCTGCTGCTACTGTTGGAAATTGACAAGTTGGTCATTTTGAGAATACGGTTCCTTCCAAAGGTTTATAAAATTCTTAAATTTTGATATTTTTTTATTATCTATGGAATTATGAAGTGTCTTATTGAATTTTCATTCGTTTTTGTTTTTACTTTATGTATTTAATTAAAAATGAATTTAACAATATAGTGTCCACTAGAAAGCGGATATAATTGTCCGTAAGACACAACTCAACGGACAATGTCATTATTGTTAGGCTAAACATGTTCACCCTGGTTTGAATTCAGACCTCGCAGTTGTGTGTCGGAGTTTAGGTGGCGTTTTCCACTTTGTTTGAACCCCAATTTGGAGAGGTGGTTTGGGTGGGGGAGTTAAGGAGTGGATTGATAAGGAGGTTGAGAGTTTAACGTCTGCTGTCATGTCGCGGTCTTTGATATTACGGAGAATCACAGTTAAATGTGGTTGATGAAGCCTCAATTGCGTAGCATTGCGGTTTCAGTAACATAAAAAACTATTATGTTAAGGTCTAGATGGTCATGGACCTTTAATTAAAATCATGTTGTCGACATGTTTTATTCATGCGTCTAATTATATTTTATTTTGATTTGTTGAATTTCATCATGGGGGTGTTTGGAGAAGTGGGACAAGATAGAGATATATGATTTAATATCTGTTTAATCGTGCATAGTTATTATATTTCAGAAAACATTAATTCAATAGTCGTTAATTTAATTATATTTCACCGTTTTGATATATTTAATTTTACCATGGTAGATAGAGAAATATAATGGAATTTCTGCGTAAAATATACTCTGTGCAGTTATTAAATATTTTAAAATTGTGCTTTTGTTAACATCCATTGATACTAAAAATACACTTTTAAGCGATTAGAATGAACATATTGTCATCTGAAGGGGTTAGCAATCTATTTTAGCATTTTATATAATTTTTATGTGTCTGTGTTAGAGTAATTCTCAATGTTATTGGCTTCTATGTTTTCTTGGGATGATGATTTTCCGTGTTGTTTTGATGATGGATAGAAATTCTGGAGCTATGGAAGAATGGTGATGCAGTGTGCTTTGATGTGGATAGCACTGTGTGCCTGGATGAAGGAATTGACGAGCTTGCTGAATTTTGTGGGGCTGGAAAAGCTGTTGCAGAATGGACTGCAAAGTTAGATTGTTCAAATGGAAATTCTGTTTTGAGAAATGGTTTATGTTTTTGAATTTCTTTGGTATCTTTTTTGTTATATTTCACAGAGCAATGGGTGGTTCTGTTCCTTTTGAGGAAGCCTTGGCTGCTAGGTTATCTTTGTTGAATCCCTCTATGTCTCAACTTGAAAATTTTCTTCAGCAAAGGCCGCCAAGGTATGATTGAGACCGGCTGATTTTGTTTTCAGTGTTTTTTGTCTTGAGCAGCTTTCACGTATTGATGATAATCAATGTAGCTTCATGACTTAGGAGTATTTCGCTTTCGATTTGGCTAGTAATCACGTTAAGTTGATCAGGCAGTTCCTACTCCCCCATTTCTCTTGCTTTAGACTTTTAACTTGGCAGAGCTGAAAGGTTTTATTGACTTGTCAACACTGAGAGAAATGATACCCTACACTTCTAATGATATTTTAGATTTATTGACTTGTTCGTTCTCATAACCATCCAAAACTTTAAAGGGGTGTTTTGATTCAACGGTTGAGTTGCTACTGCGTGACTAAGAGGTCGCATAGGTTTGAGTAGCGGAATCAGTCCCTTGTAAATGCAATCTAACTGGTAAGGCAGCATACTATAGACTTGGAAGAAGTTGATTTTGCCCTAGAATATACTATAACAGTAGCTTTGTTGAACCAGGTTATTTTTTTGCTAGACCAGCCAAAACTCTGACGAGACAAAAAGTTTATATATGTATCACCAAAGCCTAACTACCTACTTTATTTTCTCTGCTTTCTCATCACTGTTTCTCCTATTGTATCCTGAACTGGTCAATTCAGACATATTTGGAACAATTCTTATGATTCTCTTTAATATGCAGGCTTTCCCCTGGCATTGAAGAGTTAATCCAGAAACTAAAGGCTAATGGCAAGCATGTATATCTGATCTCAGGGAGCTTTCGTCAAATAATCAATGTATGGATAATAGTTGTAATGATTATTTTTTTGGATTTATTTTAGACTAAGAAGAGTATTTCAGTAGTAAAAAAATAGAGTAGTTAAAACTACAATTAAAATTCTTAAAAAAAACTACTACAATTTTTATGGAAGAATGGTGATGCAGTGTGCTTTGATGTGGATAGCACTGTGTGCATTGATGAAGGAAAGGCTGTTGCAGACTGGACTGCTAGGTTAGATTGTTCAGATGGAATTTTTTTTTTTTGATAAAGGGTTTATATTTTTGAATTTCTTTGGTATCTCTTTTGTTATATTTGATTTAAGTGTTGAATTTTCACAGAGCAATGGGTGGTTCTGTTCCTTTTGAGGAAGCATTGGCTGCTAGGTTATTTTTGTTCGATACCTCTATGGAAACTTGAAATTGATGAATGGTGTAGAGGGGGAACATGACATGGAAAATATGGGGAAAATGTTGAAATTGATGCTTTTTTGTGCTTGCTGCAAGTTTTGTAACCGGTGACTTCTTCAATTTTTGATGCAGTGACTTCAAACAGCGATTGTCTGAACACCATGATGAAGTGCATAGCAGTAAGATATTGGTTAAATTCTTTGAGCTAAATCCAATTTTCGTATATCGTTATTTCATGCTTTGGATTCTTTCCGATAGACCATATCCTTTTAAAATTAGTGGGCTAATCAAACTAGTTTTATTTGGTTTTTCAGTTCTATTTACTTCTAAGTATGAGAGTGTTGTTTCACCACAGTTACCAAATGTGAAGGTTCTAAACAATAGTGAAAGTAATACAACATCTGCAAATAAAGTAGGTATTCGCAGTCATAAATGTGAGATAAAAGCTATTCGAAAGAAGATGAAAGTAAGTTGTTTTTTCCATTCATTCTTCTCATAATGTTCTTGTTCCGTTCCGTTATTTCACACTGTTCATTGTTTATCCATGTTGTATAAGGTTATATTCATTTTATGTATGAGTGATCTACTGAACCTGATTTTCTTAATACAGTTTTGGTACTTTGGTCTCAGGTAGACTGGACGCCAGAGCTGCACAAAAAATTTGTGAAGGCAGTGGAGCAACTAGGCATTGATCACGCTATTCCTTCTCGAATATTGGATCTAATGAAAGTGGAGGGCTTGACAAGGCATAATGTGGCAAGCCATCTTCAGGTTATAATCTACCTTCCCACGGTTTCCAAAAACTATTTCAATACCTCATTCAAAACTGTAATTAATGATAAATTGATATTCATATATCTTCATAGGTAATGAATACTAACATAAGGTCTTTTATTGTTTAAATTCAACCAGAAATATAGAATGCATAAGAGACATATCTTACCAAAGCAGGATGATCGGAAATGGCTAAATACAAGGTAGTTAAATATGCTTGACATATATAGGTACTCTGATTTCTTGTCTTATCTCTTGAACCTTGTAAATGGGTTGGGAATTTGTATATAAATGTTGGAGTTTGTGGGTTGAAAATGAAGGAATTTGGGGATGAAGAAGGATAA
Protein sequence

>MS.gene021281.t1

MEIPWIVDPTFFVFSLYMEALISYGINPVRVNVITKQRSCFPFESKPNLKKEILELWKNGDAVCFDVDSTVCLDEGIDELAEFCGAGKAVAEWTAKAMGGSVPFEEALAARLSLLNPSMSQLENFLQQRPPRLSPGIEELIQKLKANGKHVYLISGSFRQIINNGDAVCFDVDSTVCIDEGKAVADWTARAMGGSVPFEEALAASDFKQRLSEHHDEVHSILFTSKYESVVSPQLPNVKVLNNSESNTTSANKVGIRSHKCEIKAIRKKMKVDWTPELHKKFVKAVEQLGIDHAIPSRILDLMKVEGLTRHNVASHLQEFGDEEG