Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021489.t1 | RHN81411.1 | 64.2 | 758 | 162 | 2 | 13 | 697 | 35 | 756 | 2.40E-275 | 958 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021489.t1 | Q9SY66 | 50.1 | 501 | 242 | 5 | 73 | 572 | 60 | 553 | 2.3e-141 | 504.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021489.t1 | A0A396JX52 | 64.2 | 758 | 162 | 2 | 13 | 697 | 35 | 756 | 1.8e-275 | 958.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene021489.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021489.t1 | MTR_3g450850 | 69.373 | 271 | 82 | 1 | 31 | 300 | 16 | 286 | 3.42e-131 | 391 |
| MS.gene021489.t1 | MTR_4g035820 | 37.736 | 318 | 174 | 6 | 60 | 370 | 74 | 374 | 4.39e-52 | 192 |
| MS.gene021489.t1 | MTR_4g035820 | 33.659 | 205 | 108 | 3 | 449 | 653 | 326 | 502 | 7.39e-22 | 100 |
| MS.gene021489.t1 | MTR_3g012160 | 83.696 | 92 | 15 | 0 | 210 | 301 | 2 | 93 | 1.43e-46 | 160 |
| MS.gene021489.t1 | MTR_4g071400 | 96.203 | 79 | 3 | 0 | 574 | 652 | 43 | 121 | 1.22e-43 | 153 |
| MS.gene021489.t1 | MTR_1g070355 | 32.540 | 252 | 150 | 7 | 61 | 306 | 72 | 309 | 7.79e-29 | 122 |
| MS.gene021489.t1 | MTR_6g051425 | 27.208 | 283 | 194 | 5 | 62 | 341 | 18 | 291 | 5.18e-27 | 113 |
| MS.gene021489.t1 | MTR_5g076070 | 27.917 | 240 | 157 | 7 | 64 | 300 | 56 | 282 | 2.39e-23 | 101 |
| MS.gene021489.t1 | MTR_3g095940 | 74.074 | 54 | 14 | 0 | 514 | 567 | 90 | 143 | 3.70e-20 | 87.8 |
| MS.gene021489.t1 | MTR_5g083630 | 57.143 | 70 | 24 | 1 | 204 | 267 | 7 | 76 | 7.24e-18 | 80.1 |
| MS.gene021489.t1 | MTR_6g014355 | 37.013 | 154 | 81 | 5 | 142 | 287 | 14 | 159 | 9.68e-17 | 80.9 |
| MS.gene021489.t1 | MTR_6g022080 | 30.909 | 165 | 97 | 6 | 72 | 232 | 96 | 247 | 5.18e-14 | 72.8 |
| MS.gene021489.t1 | MTR_0558s0020 | 24.715 | 263 | 175 | 7 | 66 | 312 | 41 | 296 | 6.35e-14 | 73.6 |
| MS.gene021489.t1 | MTR_8g446020 | 26.178 | 191 | 131 | 4 | 126 | 312 | 72 | 256 | 1.87e-12 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021489.t1 | AT1G10240 | 48.000 | 550 | 272 | 7 | 30 | 572 | 11 | 553 | 0.0 | 533 |
| MS.gene021489.t1 | AT1G10240 | 48.000 | 550 | 272 | 7 | 30 | 572 | 11 | 553 | 0.0 | 533 |
| MS.gene021489.t1 | AT5G28530 | 42.545 | 550 | 291 | 4 | 31 | 570 | 27 | 561 | 6.70e-160 | 477 |
| MS.gene021489.t1 | AT5G28530 | 42.545 | 550 | 291 | 4 | 31 | 570 | 27 | 561 | 6.70e-160 | 477 |
| MS.gene021489.t1 | AT5G28530 | 42.364 | 550 | 296 | 4 | 31 | 570 | 27 | 565 | 4.07e-159 | 475 |
| MS.gene021489.t1 | AT5G28530 | 38.148 | 540 | 266 | 7 | 31 | 570 | 27 | 498 | 9.32e-125 | 384 |
| MS.gene021489.t1 | AT5G28530 | 37.963 | 540 | 271 | 7 | 31 | 570 | 27 | 502 | 3.51e-124 | 383 |
| MS.gene021489.t1 | AT4G38180 | 30.019 | 513 | 345 | 6 | 61 | 570 | 73 | 574 | 8.55e-68 | 238 |
| MS.gene021489.t1 | AT4G15090 | 30.204 | 490 | 320 | 10 | 61 | 544 | 51 | 524 | 3.18e-67 | 237 |
| MS.gene021489.t1 | AT4G15090 | 30.204 | 490 | 320 | 10 | 61 | 544 | 51 | 524 | 3.18e-67 | 237 |
| MS.gene021489.t1 | AT4G15090 | 30.204 | 490 | 320 | 10 | 61 | 544 | 51 | 524 | 3.18e-67 | 237 |
| MS.gene021489.t1 | AT4G15090 | 30.204 | 490 | 320 | 10 | 61 | 544 | 51 | 524 | 3.18e-67 | 237 |
| MS.gene021489.t1 | AT4G15090 | 30.204 | 490 | 320 | 10 | 61 | 544 | 51 | 524 | 3.18e-67 | 237 |
| MS.gene021489.t1 | AT3G22170 | 27.539 | 512 | 322 | 16 | 49 | 544 | 55 | 533 | 1.66e-53 | 198 |
| MS.gene021489.t1 | AT3G22170 | 27.539 | 512 | 322 | 16 | 49 | 544 | 55 | 533 | 1.66e-53 | 198 |
| MS.gene021489.t1 | AT1G76320 | 27.869 | 488 | 313 | 12 | 67 | 544 | 3 | 461 | 7.26e-52 | 191 |
| MS.gene021489.t1 | AT1G76320 | 27.869 | 488 | 313 | 12 | 67 | 544 | 3 | 461 | 1.00e-51 | 192 |
| MS.gene021489.t1 | AT1G76320 | 27.869 | 488 | 313 | 12 | 67 | 544 | 3 | 461 | 1.01e-51 | 192 |
| MS.gene021489.t1 | AT1G76320 | 27.869 | 488 | 313 | 12 | 67 | 544 | 3 | 461 | 1.01e-51 | 192 |
| MS.gene021489.t1 | AT3G06250 | 25.600 | 500 | 307 | 12 | 61 | 555 | 190 | 629 | 1.63e-45 | 174 |
| MS.gene021489.t1 | AT3G06250 | 25.600 | 500 | 307 | 12 | 61 | 555 | 190 | 629 | 1.63e-45 | 174 |
| MS.gene021489.t1 | AT3G06250 | 25.600 | 500 | 307 | 12 | 61 | 555 | 190 | 629 | 1.63e-45 | 174 |
| MS.gene021489.t1 | AT5G18960 | 25.532 | 517 | 317 | 12 | 47 | 555 | 197 | 653 | 5.77e-45 | 172 |
| MS.gene021489.t1 | AT5G18960 | 25.532 | 517 | 317 | 12 | 47 | 555 | 197 | 653 | 5.77e-45 | 172 |
| MS.gene021489.t1 | AT2G27110 | 25.514 | 486 | 319 | 12 | 61 | 544 | 49 | 493 | 3.44e-40 | 159 |
| MS.gene021489.t1 | AT2G27110 | 25.514 | 486 | 319 | 12 | 61 | 544 | 49 | 493 | 3.44e-40 | 159 |
| MS.gene021489.t1 | AT2G32250 | 27.586 | 290 | 208 | 2 | 256 | 544 | 180 | 468 | 2.66e-39 | 155 |
| MS.gene021489.t1 | AT2G32250 | 27.586 | 290 | 208 | 2 | 256 | 544 | 139 | 427 | 3.59e-39 | 155 |
| MS.gene021489.t1 | AT2G32250 | 27.586 | 290 | 208 | 2 | 256 | 544 | 180 | 468 | 3.84e-39 | 155 |
| MS.gene021489.t1 | AT2G32250 | 27.586 | 290 | 208 | 2 | 256 | 544 | 180 | 468 | 3.84e-39 | 155 |
| MS.gene021489.t1 | AT2G32250 | 27.586 | 290 | 208 | 2 | 256 | 544 | 180 | 468 | 3.84e-39 | 155 |
| MS.gene021489.t1 | AT2G32250 | 27.586 | 290 | 208 | 2 | 256 | 544 | 180 | 468 | 3.88e-39 | 155 |
| MS.gene021489.t1 | AT2G32250 | 27.586 | 290 | 208 | 2 | 256 | 544 | 180 | 468 | 3.88e-39 | 155 |
| MS.gene021489.t1 | AT2G32250 | 27.586 | 290 | 208 | 2 | 256 | 544 | 139 | 427 | 4.24e-39 | 155 |
| MS.gene021489.t1 | AT4G19990 | 26.441 | 503 | 296 | 14 | 63 | 544 | 23 | 472 | 8.74e-38 | 150 |
| MS.gene021489.t1 | AT4G19990 | 26.441 | 503 | 296 | 14 | 63 | 544 | 23 | 472 | 8.74e-38 | 150 |
| MS.gene021489.t1 | AT4G19990 | 26.441 | 503 | 296 | 14 | 63 | 544 | 23 | 472 | 8.85e-38 | 150 |
| MS.gene021489.t1 | AT4G19990 | 26.441 | 503 | 296 | 14 | 63 | 544 | 37 | 486 | 1.22e-37 | 150 |
| MS.gene021489.t1 | AT4G19990 | 26.441 | 503 | 296 | 14 | 63 | 544 | 23 | 472 | 1.57e-37 | 150 |
| MS.gene021489.t1 | AT4G19990 | 26.441 | 503 | 296 | 14 | 63 | 544 | 23 | 472 | 1.57e-37 | 150 |
| MS.gene021489.t1 | AT1G52520 | 25.558 | 493 | 328 | 14 | 61 | 545 | 85 | 546 | 4.18e-36 | 145 |
| MS.gene021489.t1 | AT2G27110 | 28.013 | 307 | 213 | 5 | 240 | 544 | 48 | 348 | 5.04e-36 | 145 |
| MS.gene021489.t1 | AT4G19990 | 25.835 | 449 | 275 | 11 | 112 | 544 | 9 | 415 | 2.42e-33 | 137 |
| MS.gene021489.t1 | AT1G80010 | 23.784 | 555 | 316 | 17 | 61 | 563 | 95 | 594 | 1.84e-32 | 134 |
| MS.gene021489.t1 | AT4G38170 | 27.457 | 346 | 240 | 6 | 244 | 583 | 16 | 356 | 7.63e-31 | 128 |
Find 118 sgRNAs with CRISPR-Local
Find 160 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTTACCCATCGTAAATTT+TGG | 0.158198 | 1.4:-11032653 | MS.gene021489:CDS |
| CCAATTAAAACTTACTTATT+AGG | 0.177601 | 1.4:+11031622 | None:intergenic |
| ATGAGATGCCTCTTGGAATA+TGG | 0.196486 | 1.4:-11033154 | MS.gene021489:CDS |
| TTCTCACAACCACGAGTTAT+TGG | 0.199264 | 1.4:-11033576 | MS.gene021489:CDS |
| ATCACATGTTCTTGAGTTTC+AGG | 0.210618 | 1.4:+11031865 | None:intergenic |
| CTCATGTTGAAGCAACTTAA+AGG | 0.248230 | 1.4:+11032299 | None:intergenic |
| TGTTTATTTGCAAAACAAAA+TGG | 0.260407 | 1.4:-11033842 | MS.gene021489:CDS |
| AAAATCTGTCAAACTTGTTT+TGG | 0.261322 | 1.4:+11032536 | None:intergenic |
| ATTCGTGCATATGAAGCTTT+TGG | 0.265394 | 1.4:-11033218 | MS.gene021489:CDS |
| CAATATGAATTCACAATTGA+TGG | 0.266214 | 1.4:-11033284 | MS.gene021489:CDS |
| TTCCTTCGCATGGGCTATAA+AGG | 0.299718 | 1.4:-11033063 | MS.gene021489:intron |
| AATATCATCATAAAGATAAA+AGG | 0.310779 | 1.4:-11031892 | MS.gene021489:CDS |
| TCAAGAACATGTGATTGATT+TGG | 0.314506 | 1.4:-11031857 | MS.gene021489:CDS |
| CATCAATTGTGAATTCATAT+TGG | 0.326055 | 1.4:+11033285 | None:intergenic |
| GCAGCTTCAACCCCTCCTTT+TGG | 0.339248 | 1.4:+11031751 | None:intergenic |
| ATTCAATCATATAGTGGTAT+TGG | 0.341059 | 1.4:-11033374 | MS.gene021489:CDS |
| ACTCTCGCTATAAGACTTAC+AGG | 0.343612 | 1.4:+11033464 | None:intergenic |
| CAAATTGGAGCATATTGTTT+GGG | 0.347369 | 1.4:-11033255 | MS.gene021489:CDS |
| GAGCATATTGTTTGGGCATT+TGG | 0.348974 | 1.4:-11033248 | MS.gene021489:CDS |
| ACAAATTGGAGCATATTGTT+TGG | 0.352856 | 1.4:-11033256 | MS.gene021489:CDS |
| AATTGATGGAAGTAACAAAT+TGG | 0.358783 | 1.4:-11033270 | MS.gene021489:CDS |
| ATGACAACGACGAGGCTTCT+TGG | 0.366012 | 1.4:+11031729 | None:intergenic |
| TCAGTCTCTAATTCGATGTT+TGG | 0.372448 | 1.4:-11031971 | MS.gene021489:intron |
| AACGTCACAGTCAGCATTGT+TGG | 0.377007 | 1.4:+11031822 | None:intergenic |
| ATGGTCTCACAGTTTGGTTT+GGG | 0.387072 | 1.4:-11032699 | MS.gene021489:CDS |
| GTAGTTACTAAGAGAAGAAT+TGG | 0.389295 | 1.4:-11033635 | MS.gene021489:CDS |
| AATGGTCTCACAGTTTGGTT+TGG | 0.398201 | 1.4:-11032700 | MS.gene021489:CDS |
| CCTCAAGTCACTAACATTGA+TGG | 0.399508 | 1.4:-11034031 | MS.gene021489:CDS |
| GCAATGGCTTCTTTAATTGA+AGG | 0.406562 | 1.4:+11032891 | None:intergenic |
| TCAAATATTTGCCCTTCAAA+AGG | 0.411166 | 1.4:+11034001 | None:intergenic |
| ATCCATCGGGTGTTTATAAG+AGG | 0.417116 | 1.4:-11033763 | MS.gene021489:CDS |
| TTTGCTGGAATGACAACAAC+AGG | 0.418779 | 1.4:-11032603 | MS.gene021489:CDS |
| AAAGTAATGGTCTCACAGTT+TGG | 0.427267 | 1.4:-11032705 | MS.gene021489:CDS |
| TGAGATGCCTCTTGGAATAT+GGG | 0.433904 | 1.4:-11033153 | MS.gene021489:CDS |
| TTGGGCCTTAGCTTATTTGA+AGG | 0.435274 | 1.4:-11032634 | MS.gene021489:CDS |
| TATACGACCACCATCAACTT+TGG | 0.437731 | 1.4:+11032209 | None:intergenic |
| GACGAGGCATGTTCTTCAAT+AGG | 0.443666 | 1.4:+11032339 | None:intergenic |
| TGATTAGTTCCACCACAATC+TGG | 0.446933 | 1.4:+11031703 | None:intergenic |
| AACCGTTATGAGATGCCTCT+TGG | 0.448749 | 1.4:-11033161 | MS.gene021489:CDS |
| CTTTAAACATGAGTTTCATC+AGG | 0.451700 | 1.4:-11032769 | MS.gene021489:CDS |
| AAAGACAAGTGAACGAGAAC+AGG | 0.453486 | 1.4:-11031935 | MS.gene021489:CDS |
| GGAAAATGTGTTGTAATATG+AGG | 0.458305 | 1.4:+11032360 | None:intergenic |
| GTTTGTCATCGTGGTGGTAT+TGG | 0.458689 | 1.4:-11033734 | MS.gene021489:CDS |
| ATGCGATCTTGATCAACAAT+TGG | 0.465554 | 1.4:+11033512 | None:intergenic |
| CTCACAGTTTGGTTTGGGTG+TGG | 0.468983 | 1.4:-11032694 | MS.gene021489:CDS |
| ATAACGGTTTATTCTATATG+TGG | 0.472493 | 1.4:+11033175 | None:intergenic |
| TATAAGACTTACAGGGCAAC+CGG | 0.483233 | 1.4:+11033472 | None:intergenic |
| CTTGAGTTAGAGAAAAGAAC+AGG | 0.494786 | 1.4:-11033440 | MS.gene021489:CDS |
| AAAACAAAAGGTCGGCCAAA+AGG | 0.495104 | 1.4:-11031781 | MS.gene021489:CDS |
| TTGATAGGATCATGAAGGGT+TGG | 0.498564 | 1.4:-11031535 | MS.gene021489:intron |
| TGAAGCAACTTAAAGGCATA+AGG | 0.499495 | 1.4:+11032306 | None:intergenic |
| AGAAGATTTCTTCCTTCGCA+TGG | 0.503824 | 1.4:-11033073 | MS.gene021489:CDS |
| CGTTGTCATGTTCCAGATTG+TGG | 0.504732 | 1.4:-11031715 | MS.gene021489:CDS |
| AATTGTGAATTCATATTGGA+AGG | 0.507660 | 1.4:+11033289 | None:intergenic |
| CCAAAAGGATCAAGACCAAA+AGG | 0.514192 | 1.4:-11031766 | MS.gene021489:CDS |
| GTCAAAATTAGAAATCAAGC+TGG | 0.517568 | 1.4:-11032417 | MS.gene021489:CDS |
| TTTAATTGAAGGATCTTGAT+CGG | 0.518039 | 1.4:+11032902 | None:intergenic |
| ATTGGAATGTTACGATAAGC+AGG | 0.522557 | 1.4:+11033530 | None:intergenic |
| ATGTTATTGACTTGAGGCAA+GGG | 0.525418 | 1.4:+11033929 | None:intergenic |
| TAAGCAATGATGCTAGTGAT+TGG | 0.525487 | 1.4:-11034060 | MS.gene021489:CDS |
| ACCACGCAAAACTGTTGAAG+TGG | 0.526679 | 1.4:-11033708 | MS.gene021489:CDS |
| TTAGAGAAAAGAACAGGCAC+AGG | 0.528687 | 1.4:-11033434 | MS.gene021489:CDS |
| TGGGTTGGTGTTGATAATCA+TGG | 0.529258 | 1.4:-11033134 | MS.gene021489:CDS |
| ATACTATTATTGTCTAAAGC+CGG | 0.531055 | 1.4:-11033491 | MS.gene021489:CDS |
| TTCCAAGAGGCATCTCATAA+CGG | 0.531646 | 1.4:+11033159 | None:intergenic |
| CAACATCATACCAAAGTTGA+TGG | 0.538288 | 1.4:-11032219 | MS.gene021489:CDS |
| TGAACGAGAATGGAAAGTAA+TGG | 0.544871 | 1.4:-11032718 | MS.gene021489:CDS |
| TTGCACAACATAAGAGCCAT+TGG | 0.551354 | 1.4:+11032239 | None:intergenic |
| CTCAAGTCACTAACATTGAT+GGG | 0.551567 | 1.4:-11034030 | MS.gene021489:CDS |
| TAAGAGAAGAATTGGCATTG+AGG | 0.553953 | 1.4:-11033627 | MS.gene021489:CDS |
| GAAGATTTCTTCCTTCGCAT+GGG | 0.556681 | 1.4:-11033072 | MS.gene021489:CDS |
| GTGCTTTGATAGGATCATGA+AGG | 0.556862 | 1.4:-11031540 | MS.gene021489:intron |
| CAAGTCAATAACATTGATGA+GGG | 0.558520 | 1.4:-11033920 | MS.gene021489:CDS |
| AAAGTCCTTCAAATAAGCTA+AGG | 0.560983 | 1.4:+11032629 | None:intergenic |
| ACATGTGATTGATTTGGAAG+AGG | 0.565753 | 1.4:-11031851 | MS.gene021489:CDS |
| GTTTGGCAATTCCATTGCAA+TGG | 0.567761 | 1.4:+11032875 | None:intergenic |
| ATGTGATTGTAGTGCAAAGA+TGG | 0.570079 | 1.4:-11033657 | MS.gene021489:CDS |
| ATGTTAGTGACTTGAGGCAA+GGG | 0.572230 | 1.4:+11034037 | None:intergenic |
| GTGTCAGAAGAGAATCCATC+GGG | 0.572540 | 1.4:-11033776 | MS.gene021489:CDS |
| TCATCAATGTTATTGACTTG+AGG | 0.573525 | 1.4:+11033923 | None:intergenic |
| AATTAAAGAAGCCATTGCAA+TGG | 0.576797 | 1.4:-11032886 | MS.gene021489:CDS |
| TAGAAATCAAGCTGGAGAAG+AGG | 0.577533 | 1.4:-11032409 | MS.gene021489:CDS |
| CGAGTTATTGGATGACAAAG+AGG | 0.580002 | 1.4:-11033564 | MS.gene021489:CDS |
| AATGTTATTGACTTGAGGCA+AGG | 0.580693 | 1.4:+11033928 | None:intergenic |
| AGTCACTAACATTGATGGGT+GGG | 0.589348 | 1.4:-11034026 | MS.gene021489:CDS |
| TTGTCGCAAAGCTGTCAAGT+TGG | 0.589381 | 1.4:-11032824 | MS.gene021489:CDS |
| TCATCATATCTCGAACCTAG+TGG | 0.597376 | 1.4:+11032792 | None:intergenic |
| AATGTTAGTGACTTGAGGCA+AGG | 0.597462 | 1.4:+11034036 | None:intergenic |
| AGGGAATTTGTTTGTCATCG+TGG | 0.598966 | 1.4:-11033743 | MS.gene021489:CDS |
| TCCCTCTTATAAACACCCGA+TGG | 0.599604 | 1.4:+11033761 | None:intergenic |
| GCAGCAATTGAAGCTGCCAA+TGG | 0.600590 | 1.4:-11032255 | MS.gene021489:CDS |
| TACCTTTATAGCCCATGCGA+AGG | 0.601051 | 1.4:+11033061 | None:intergenic |
| TCAAGTCAATAACATTGATG+AGG | 0.603097 | 1.4:-11033921 | MS.gene021489:CDS |
| CTGTTGAAGTGGAAAATCAA+AGG | 0.606328 | 1.4:-11033697 | MS.gene021489:CDS |
| CTTTGTCATCCAATAACTCG+TGG | 0.606716 | 1.4:+11033567 | None:intergenic |
| AAGGATCAAGACCAAAAGGA+GGG | 0.611165 | 1.4:-11031762 | MS.gene021489:CDS |
| CCATCAATGTTAGTGACTTG+AGG | 0.613145 | 1.4:+11034031 | None:intergenic |
| CTAAGGCCCAAAATTTACGA+TGG | 0.615020 | 1.4:+11032646 | None:intergenic |
| TAAGGCCCAAAATTTACGAT+GGG | 0.615697 | 1.4:+11032647 | None:intergenic |
| ATGCCTCTTGGAATATGGGT+TGG | 0.616141 | 1.4:-11033149 | MS.gene021489:CDS |
| GAATTTGTTTGTCATCGTGG+TGG | 0.618777 | 1.4:-11033740 | MS.gene021489:CDS |
| AAGTCACTAACATTGATGGG+TGG | 0.624878 | 1.4:-11034027 | MS.gene021489:CDS |
| TCCATCGGGTGTTTATAAGA+GGG | 0.625908 | 1.4:-11033762 | MS.gene021489:CDS |
| ACGAGAACAGGTTGCCACAA+GGG | 0.630576 | 1.4:-11031923 | MS.gene021489:CDS |
| TGTGTCAGAAGAGAATCCAT+CGG | 0.632507 | 1.4:-11033777 | MS.gene021489:CDS |
| AACGAGAACAGGTTGCCACA+AGG | 0.633734 | 1.4:-11031924 | MS.gene021489:CDS |
| TACTTATTAGGAGATTGAGA+AGG | 0.635742 | 1.4:+11031634 | None:intergenic |
| TGTCATGTTCCAGATTGTGG+TGG | 0.637809 | 1.4:-11031712 | MS.gene021489:CDS |
| CTCTCGCTATAAGACTTACA+GGG | 0.647869 | 1.4:+11033465 | None:intergenic |
| AAAGGATCAAGACCAAAAGG+AGG | 0.655085 | 1.4:-11031763 | MS.gene021489:CDS |
| ACACCAACCCATATTCCAAG+AGG | 0.676376 | 1.4:+11033146 | None:intergenic |
| TGCTTTGATAGGATCATGAA+GGG | 0.676443 | 1.4:-11031539 | MS.gene021489:intron |
| AAGTTTGAAAGATCGAGATG+AGG | 0.682349 | 1.4:-11033312 | MS.gene021489:CDS |
| CATCATACCAAAGTTGATGG+TGG | 0.683172 | 1.4:-11032216 | MS.gene021489:CDS |
| AGGATCAAGACCAAAAGGAG+GGG | 0.696841 | 1.4:-11031761 | MS.gene021489:CDS |
| AAGTCAATAACATTGATGAG+GGG | 0.714581 | 1.4:-11033919 | MS.gene021489:CDS |
| ATAAGGTGTGAGTATAGACG+AGG | 0.720548 | 1.4:+11032323 | None:intergenic |
| TCTGGAACATGACAACGACG+AGG | 0.797744 | 1.4:+11031721 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATATTAACTGTATTTTTA+TGG | - | chr1.4:11034040-11034059 | MS.gene021489:CDS | 10.0% |
| !! | AATATCATCATAAAGATAAA+AGG | - | chr1.4:11033710-11033729 | MS.gene021489:CDS | 15.0% |
| !!! | AATTTTATTCAATCATATAG+TGG | - | chr1.4:11032222-11032241 | MS.gene021489:CDS | 15.0% |
| !! | CCAATTAAAACTTACTTATT+AGG | + | chr1.4:11033983-11034002 | None:intergenic | 20.0% |
| !! | TGTTTATTTGCAAAACAAAA+TGG | - | chr1.4:11031760-11031779 | MS.gene021489:CDS | 20.0% |
| !!! | AACAAAATGGATTTTCTATT+AGG | - | chr1.4:11031773-11031792 | MS.gene021489:CDS | 20.0% |
| !!! | CATGGAAATTCAATTTTTTT+TGG | - | chr1.4:11032486-11032505 | MS.gene021489:intron | 20.0% |
| !!! | CCTAATAAGTAAGTTTTAAT+TGG | - | chr1.4:11033980-11033999 | MS.gene021489:CDS | 20.0% |
| !!! | CTAATATCTTTTTCTAAGAA+TGG | + | chr1.4:11032201-11032220 | None:intergenic | 20.0% |
| !!! | TGATTGTTATATTTTTGTGT+AGG | - | chr1.4:11033151-11033170 | MS.gene021489:CDS | 20.0% |
| !!! | TTATTACATGACTAGATTTT+GGG | + | chr1.4:11033583-11033602 | None:intergenic | 20.0% |
| !!! | TTTATTACATGACTAGATTT+TGG | + | chr1.4:11033584-11033603 | None:intergenic | 20.0% |
| ! | AATTGATGGAAGTAACAAAT+TGG | - | chr1.4:11032332-11032351 | MS.gene021489:CDS | 25.0% |
| ! | AATTGTGAATTCATATTGGA+AGG | + | chr1.4:11032316-11032335 | None:intergenic | 25.0% |
| ! | ATAACGGTTTATTCTATATG+TGG | + | chr1.4:11032430-11032449 | None:intergenic | 25.0% |
| ! | ATTCAATCATATAGTGGTAT+TGG | - | chr1.4:11032228-11032247 | MS.gene021489:CDS | 25.0% |
| ! | CAATATGAATTCACAATTGA+TGG | - | chr1.4:11032318-11032337 | MS.gene021489:CDS | 25.0% |
| ! | CATCAATTGTGAATTCATAT+TGG | + | chr1.4:11032320-11032339 | None:intergenic | 25.0% |
| ! | TCCAAACAAAAAGAGAAAAA+TGG | - | chr1.4:11033937-11033956 | MS.gene021489:CDS | 25.0% |
| ! | TTGTTTCAAAAACAAAAGGT+CGG | - | chr1.4:11033813-11033832 | MS.gene021489:CDS | 25.0% |
| ! | TTTAATTGAAGGATCTTGAT+CGG | + | chr1.4:11032703-11032722 | None:intergenic | 25.0% |
| !! | ATACTATTATTGTCTAAAGC+CGG | - | chr1.4:11032111-11032130 | MS.gene021489:intron | 25.0% |
| !! | TCAAATATTTTCCCTTCAAA+AGG | + | chr1.4:11031712-11031731 | None:intergenic | 25.0% |
| !! | TGTAAAGAGTTTCAATTTTC+AGG | - | chr1.4:11033455-11033474 | MS.gene021489:CDS | 25.0% |
| !!! | AAAATCTGTCAAACTTGTTT+TGG | + | chr1.4:11033069-11033088 | None:intergenic | 25.0% |
| !!! | TATTTTTATGGTGCTTTGAT+AGG | - | chr1.4:11034052-11034071 | MS.gene021489:CDS | 25.0% |
| !!! | TCCATTTTTCTCTTTTTGTT+TGG | + | chr1.4:11033941-11033960 | None:intergenic | 25.0% |
| !!! | TGTTATATTTTTGTGTAGGT+TGG | - | chr1.4:11033155-11033174 | MS.gene021489:CDS | 25.0% |
| AAAGTCCTTCAAATAAGCTA+AGG | + | chr1.4:11032976-11032995 | None:intergenic | 30.0% | |
| AAGTCAATAACATTGATGAG+GGG | - | chr1.4:11031683-11031702 | MS.gene021489:CDS | 30.0% | |
| AATTAAAGAAGCCATTGCAA+TGG | - | chr1.4:11032716-11032735 | MS.gene021489:CDS | 30.0% | |
| ACAAATTGGAGCATATTGTT+TGG | - | chr1.4:11032346-11032365 | MS.gene021489:CDS | 30.0% | |
| CAAATTGGAGCATATTGTTT+GGG | - | chr1.4:11032347-11032366 | MS.gene021489:CDS | 30.0% | |
| CAAGTCAATAACATTGATGA+GGG | - | chr1.4:11031682-11031701 | MS.gene021489:CDS | 30.0% | |
| CATGTAATAAACTGCAATGA+TGG | - | chr1.4:11033593-11033612 | MS.gene021489:CDS | 30.0% | |
| CTTTAAACATGAGTTTCATC+AGG | - | chr1.4:11032833-11032852 | MS.gene021489:CDS | 30.0% | |
| GGAAAATGTGTTGTAATATG+AGG | + | chr1.4:11033245-11033264 | None:intergenic | 30.0% | |
| GTAGTTACTAAGAGAAGAAT+TGG | - | chr1.4:11031967-11031986 | MS.gene021489:CDS | 30.0% | |
| GTCAAAATTAGAAATCAAGC+TGG | - | chr1.4:11033185-11033204 | MS.gene021489:CDS | 30.0% | |
| TACTTATTAGGAGATTGAGA+AGG | + | chr1.4:11033971-11033990 | None:intergenic | 30.0% | |
| TCAAATATTTGCCCTTCAAA+AGG | + | chr1.4:11031604-11031623 | None:intergenic | 30.0% | |
| TCAAGAACATGTGATTGATT+TGG | - | chr1.4:11033745-11033764 | MS.gene021489:CDS | 30.0% | |
| TCAAGTCAATAACATTGATG+AGG | - | chr1.4:11031681-11031700 | MS.gene021489:CDS | 30.0% | |
| ! | AATTGGCATTGAGGAAAAAT+GGG | - | chr1.4:11031984-11032003 | MS.gene021489:intron | 30.0% |
| ! | ATTTTCCTTTCACAAAAGCT+AGG | + | chr1.4:11032662-11032681 | None:intergenic | 30.0% |
| ! | CAAAACATGCATTTTGCATA+TGG | - | chr1.4:11032751-11032770 | MS.gene021489:CDS | 30.0% |
| ! | CAAAATATCTTCCTTTTCGA+TGG | - | chr1.4:11033537-11033556 | MS.gene021489:CDS | 30.0% |
| ! | CAAAATGCATGTTTTGTGTT+TGG | + | chr1.4:11032747-11032766 | None:intergenic | 30.0% |
| ! | CTTTACCCATCGTAAATTTT+GGG | - | chr1.4:11032950-11032969 | MS.gene021489:CDS | 30.0% |
| ! | TCTTTACCCATCGTAAATTT+TGG | - | chr1.4:11032949-11032968 | MS.gene021489:CDS | 30.0% |
| ! | TGATCGGTAAGAATTGTTTT+TGG | + | chr1.4:11032687-11032706 | None:intergenic | 30.0% |
| !! | CCTGTTGTTTCAAAAACAAA+AGG | - | chr1.4:11033809-11033828 | MS.gene021489:CDS | 30.0% |
| !! | CGAAAAGGAAGATATTTTGA+TGG | + | chr1.4:11033536-11033555 | None:intergenic | 30.0% |
| !! | TCATCAATGTTATTGACTTG+AGG | + | chr1.4:11031682-11031701 | None:intergenic | 30.0% |
| !!! | CCTTTTGTTTTTGAAACAAC+AGG | + | chr1.4:11033812-11033831 | None:intergenic | 30.0% |
| !!! | TTGAAGGACTTTTTTTTTGC+TGG | - | chr1.4:11032984-11033003 | MS.gene021489:intron | 30.0% |
| AAAGTAATGGTCTCACAGTT+TGG | - | chr1.4:11032897-11032916 | MS.gene021489:CDS | 35.0% | |
| AAGTTTGAAAGATCGAGATG+AGG | - | chr1.4:11032290-11032309 | MS.gene021489:CDS | 35.0% | |
| ATCACATGTTCTTGAGTTTC+AGG | + | chr1.4:11033740-11033759 | None:intergenic | 35.0% | |
| ATGCGATCTTGATCAACAAT+TGG | + | chr1.4:11032093-11032112 | None:intergenic | 35.0% | |
| ATGTGATTGTAGTGCAAAGA+TGG | - | chr1.4:11031945-11031964 | MS.gene021489:CDS | 35.0% | |
| ATTGGAATGTTACGATAAGC+AGG | + | chr1.4:11032075-11032094 | None:intergenic | 35.0% | |
| CAACATCATACCAAAGTTGA+TGG | - | chr1.4:11033383-11033402 | MS.gene021489:CDS | 35.0% | |
| CTCAAGTCACTAACATTGAT+GGG | - | chr1.4:11031572-11031591 | MS.gene021489:intron | 35.0% | |
| CTCATGTTGAAGCAACTTAA+AGG | + | chr1.4:11033306-11033325 | None:intergenic | 35.0% | |
| CTGTTGAAGTGGAAAATCAA+AGG | - | chr1.4:11031905-11031924 | MS.gene021489:CDS | 35.0% | |
| CTTGAGTTAGAGAAAAGAAC+AGG | - | chr1.4:11032162-11032181 | MS.gene021489:intron | 35.0% | |
| GCAATGGCTTCTTTAATTGA+AGG | + | chr1.4:11032714-11032733 | None:intergenic | 35.0% | |
| TAAGAGAAGAATTGGCATTG+AGG | - | chr1.4:11031975-11031994 | MS.gene021489:intron | 35.0% | |
| TAAGCAATGATGCTAGTGAT+TGG | - | chr1.4:11031542-11031561 | MS.gene021489:intron | 35.0% | |
| TAAGGCCCAAAATTTACGAT+GGG | + | chr1.4:11032958-11032977 | None:intergenic | 35.0% | |
| TAGAGACTGAAATTTAGCAG+AGG | + | chr1.4:11033621-11033640 | None:intergenic | 35.0% | |
| TCAGTCTCTAATTCGATGTT+TGG | - | chr1.4:11033631-11033650 | MS.gene021489:CDS | 35.0% | |
| TGAACGAGAATGGAAAGTAA+TGG | - | chr1.4:11032884-11032903 | MS.gene021489:CDS | 35.0% | |
| TGCTTTGATAGGATCATGAA+GGG | - | chr1.4:11034063-11034082 | MS.gene021489:CDS | 35.0% | |
| ! | ATTCGTGCATATGAAGCTTT+TGG | - | chr1.4:11032384-11032403 | MS.gene021489:CDS | 35.0% |
| ! | CAGATGATTTTGAACGAGAA+TGG | - | chr1.4:11032874-11032893 | MS.gene021489:CDS | 35.0% |
| ! | GAATTGGCATTGAGGAAAAA+TGG | - | chr1.4:11031983-11032002 | MS.gene021489:intron | 35.0% |
| ! | GATATTTTCTAACTCCCTTG+TGG | + | chr1.4:11033696-11033715 | None:intergenic | 35.0% |
| ! | TGAAGCAACTTAAAGGCATA+AGG | + | chr1.4:11033299-11033318 | None:intergenic | 35.0% |
| !! | AATGTTATTGACTTGAGGCA+AGG | + | chr1.4:11031677-11031696 | None:intergenic | 35.0% |
| !! | ACATGTGATTGATTTGGAAG+AGG | - | chr1.4:11033751-11033770 | MS.gene021489:CDS | 35.0% |
| !! | AGTTTCCTAGCTTTTGTGAA+AGG | - | chr1.4:11032654-11032673 | MS.gene021489:CDS | 35.0% |
| !! | ATGTTATTGACTTGAGGCAA+GGG | + | chr1.4:11031676-11031695 | None:intergenic | 35.0% |
| !!! | AGTTGGTTTTCTTTTCCACT+AGG | - | chr1.4:11032795-11032814 | MS.gene021489:CDS | 35.0% |
| AAAACAAAAGGTCGGCCAAA+AGG | - | chr1.4:11033821-11033840 | MS.gene021489:CDS | 40.0% | |
| AAAGACAAGTGAACGAGAAC+AGG | - | chr1.4:11033667-11033686 | MS.gene021489:CDS | 40.0% | |
| AAAGGATCAAGACCAAAAGG+AGG | - | chr1.4:11033839-11033858 | MS.gene021489:CDS | 40.0% | |
| AAGGATCAAGACCAAAAGGA+GGG | - | chr1.4:11033840-11033859 | MS.gene021489:CDS | 40.0% | |
| AAGTCACTAACATTGATGGG+TGG | - | chr1.4:11031575-11031594 | MS.gene021489:intron | 40.0% | |
| AATGGTCTCACAGTTTGGTT+TGG | - | chr1.4:11032902-11032921 | MS.gene021489:CDS | 40.0% | |
| AATGTTAGTGACTTGAGGCA+AGG | + | chr1.4:11031569-11031588 | None:intergenic | 40.0% | |
| ACTCTCGCTATAAGACTTAC+AGG | + | chr1.4:11032141-11032160 | None:intergenic | 40.0% | |
| AGAAGATTTCTTCCTTCGCA+TGG | - | chr1.4:11032529-11032548 | MS.gene021489:CDS | 40.0% | |
| ATAAGGTGTGAGTATAGACG+AGG | + | chr1.4:11033282-11033301 | None:intergenic | 40.0% | |
| ATCCATCGGGTGTTTATAAG+AGG | - | chr1.4:11031839-11031858 | MS.gene021489:CDS | 40.0% | |
| ATGAGATGCCTCTTGGAATA+TGG | - | chr1.4:11032448-11032467 | MS.gene021489:intron | 40.0% | |
| ATGTTAGTGACTTGAGGCAA+GGG | + | chr1.4:11031568-11031587 | None:intergenic | 40.0% | |
| CCAAAAGGATCAAGACCAAA+AGG | - | chr1.4:11033836-11033855 | MS.gene021489:CDS | 40.0% | |
| CCATCAATGTTAGTGACTTG+AGG | + | chr1.4:11031574-11031593 | None:intergenic | 40.0% | |
| CCTCAAGTCACTAACATTGA+TGG | - | chr1.4:11031571-11031590 | MS.gene021489:intron | 40.0% | |
| CGAGTTATTGGATGACAAAG+AGG | - | chr1.4:11032038-11032057 | MS.gene021489:intron | 40.0% | |
| CTAAGGCCCAAAATTTACGA+TGG | + | chr1.4:11032959-11032978 | None:intergenic | 40.0% | |
| CTCTCGCTATAAGACTTACA+GGG | + | chr1.4:11032140-11032159 | None:intergenic | 40.0% | |
| CTTTGTCATCCAATAACTCG+TGG | + | chr1.4:11032038-11032057 | None:intergenic | 40.0% | |
| GAAGATTTCTTCCTTCGCAT+GGG | - | chr1.4:11032530-11032549 | MS.gene021489:CDS | 40.0% | |
| GAGCATATTGTTTGGGCATT+TGG | - | chr1.4:11032354-11032373 | MS.gene021489:CDS | 40.0% | |
| GTGCTTTGATAGGATCATGA+AGG | - | chr1.4:11034062-11034081 | MS.gene021489:CDS | 40.0% | |
| GTTTGGCAATTCCATTGCAA+TGG | + | chr1.4:11032730-11032749 | None:intergenic | 40.0% | |
| TAGAAATCAAGCTGGAGAAG+AGG | - | chr1.4:11033193-11033212 | MS.gene021489:CDS | 40.0% | |
| TATAAGACTTACAGGGCAAC+CGG | + | chr1.4:11032133-11032152 | None:intergenic | 40.0% | |
| TATACGACCACCATCAACTT+TGG | + | chr1.4:11033396-11033415 | None:intergenic | 40.0% | |
| TCATCATATCTCGAACCTAG+TGG | + | chr1.4:11032813-11032832 | None:intergenic | 40.0% | |
| TCCATCGGGTGTTTATAAGA+GGG | - | chr1.4:11031840-11031859 | MS.gene021489:CDS | 40.0% | |
| TGAGATGCCTCTTGGAATAT+GGG | - | chr1.4:11032449-11032468 | MS.gene021489:intron | 40.0% | |
| TGTGTCAGAAGAGAATCCAT+CGG | - | chr1.4:11031825-11031844 | MS.gene021489:CDS | 40.0% | |
| TTAGAGAAAAGAACAGGCAC+AGG | - | chr1.4:11032168-11032187 | MS.gene021489:intron | 40.0% | |
| TTCTCACAACCACGAGTTAT+TGG | - | chr1.4:11032026-11032045 | MS.gene021489:intron | 40.0% | |
| TTGATAGGATCATGAAGGGT+TGG | - | chr1.4:11034067-11034086 | MS.gene021489:CDS | 40.0% | |
| TTGCACAACATAAGAGCCAT+TGG | + | chr1.4:11033366-11033385 | None:intergenic | 40.0% | |
| TTGGGCCTTAGCTTATTTGA+AGG | - | chr1.4:11032968-11032987 | MS.gene021489:intron | 40.0% | |
| TTTGCTGGAATGACAACAAC+AGG | - | chr1.4:11032999-11033018 | MS.gene021489:intron | 40.0% | |
| ! | AGGGAATTTGTTTGTCATCG+TGG | - | chr1.4:11031859-11031878 | MS.gene021489:CDS | 40.0% |
| ! | AGTCACTAACATTGATGGGT+GGG | - | chr1.4:11031576-11031595 | MS.gene021489:intron | 40.0% |
| ! | ATGAGGGGATTCCTTTTGAA+GGG | - | chr1.4:11031698-11031717 | MS.gene021489:CDS | 40.0% |
| ! | ATGGTCTCACAGTTTGGTTT+GGG | - | chr1.4:11032903-11032922 | MS.gene021489:CDS | 40.0% |
| ! | GAATTTGTTTGTCATCGTGG+TGG | - | chr1.4:11031862-11031881 | MS.gene021489:CDS | 40.0% |
| ! | TGATTAGTTCCACCACAATC+TGG | + | chr1.4:11033902-11033921 | None:intergenic | 40.0% |
| !! | CATCATACCAAAGTTGATGG+TGG | - | chr1.4:11033386-11033405 | MS.gene021489:CDS | 40.0% |
| !! | TGGGTTGGTGTTGATAATCA+TGG | - | chr1.4:11032468-11032487 | MS.gene021489:intron | 40.0% |
| !! | TTCCAAGAGGCATCTCATAA+CGG | + | chr1.4:11032446-11032465 | None:intergenic | 40.0% |
| !!! | CCTTTTGGTCTTGATCCTTT+TGG | + | chr1.4:11033839-11033858 | None:intergenic | 40.0% |
| AACCGTTATGAGATGCCTCT+TGG | - | chr1.4:11032441-11032460 | MS.gene021489:intron | 45.0% | |
| AACGTCACAGTCAGCATTGT+TGG | + | chr1.4:11033783-11033802 | None:intergenic | 45.0% | |
| ACACCAACCCATATTCCAAG+AGG | + | chr1.4:11032459-11032478 | None:intergenic | 45.0% | |
| ACCACGCAAAACTGTTGAAG+TGG | - | chr1.4:11031894-11031913 | MS.gene021489:CDS | 45.0% | |
| AGGATCAAGACCAAAAGGAG+GGG | - | chr1.4:11033841-11033860 | MS.gene021489:CDS | 45.0% | |
| ATGCCTCTTGGAATATGGGT+TGG | - | chr1.4:11032453-11032472 | MS.gene021489:intron | 45.0% | |
| CGTTGTCATGTTCCAGATTG+TGG | - | chr1.4:11033887-11033906 | MS.gene021489:CDS | 45.0% | |
| CTTTCTCGTCTCCATCGAAA+AGG | + | chr1.4:11033551-11033570 | None:intergenic | 45.0% | |
| GACGAGGCATGTTCTTCAAT+AGG | + | chr1.4:11033266-11033285 | None:intergenic | 45.0% | |
| GTGTCAGAAGAGAATCCATC+GGG | - | chr1.4:11031826-11031845 | MS.gene021489:CDS | 45.0% | |
| GTTTGTCATCGTGGTGGTAT+TGG | - | chr1.4:11031868-11031887 | MS.gene021489:CDS | 45.0% | |
| TACCTTTATAGCCCATGCGA+AGG | + | chr1.4:11032544-11032563 | None:intergenic | 45.0% | |
| TCCCTCTTATAAACACCCGA+TGG | + | chr1.4:11031844-11031863 | None:intergenic | 45.0% | |
| TGTCATGTTCCAGATTGTGG+TGG | - | chr1.4:11033890-11033909 | MS.gene021489:CDS | 45.0% | |
| TTGTCGCAAAGCTGTCAAGT+TGG | - | chr1.4:11032778-11032797 | MS.gene021489:CDS | 45.0% | |
| ! | GATGAGGGGATTCCTTTTGA+AGG | - | chr1.4:11031697-11031716 | MS.gene021489:CDS | 45.0% |
| ! | TCCACTTCAACAGTTTTGCG+TGG | + | chr1.4:11031898-11031917 | None:intergenic | 45.0% |
| ! | TGGCATTGAGGAAAAATGGG+TGG | - | chr1.4:11031987-11032006 | MS.gene021489:intron | 45.0% |
| ! | TTCCTTCGCATGGGCTATAA+AGG | - | chr1.4:11032539-11032558 | MS.gene021489:CDS | 45.0% |
| !! | ATGGGTGGGTTCCTTTTGAA+GGG | - | chr1.4:11031590-11031609 | MS.gene021489:intron | 45.0% |
| AACGAGAACAGGTTGCCACA+AGG | - | chr1.4:11033678-11033697 | MS.gene021489:CDS | 50.0% | |
| ACGAGAACAGGTTGCCACAA+GGG | - | chr1.4:11033679-11033698 | MS.gene021489:CDS | 50.0% | |
| ATGACAACGACGAGGCTTCT+TGG | + | chr1.4:11033876-11033895 | None:intergenic | 50.0% | |
| GCAGCAATTGAAGCTGCCAA+TGG | - | chr1.4:11033347-11033366 | MS.gene021489:CDS | 50.0% | |
| ! | TCTGGAACATGACAACGACG+AGG | + | chr1.4:11033884-11033903 | None:intergenic | 50.0% |
| !! | CTCACAGTTTGGTTTGGGTG+TGG | - | chr1.4:11032908-11032927 | MS.gene021489:CDS | 50.0% |
| !! | GATGGGTGGGTTCCTTTTGA+AGG | - | chr1.4:11031589-11031608 | MS.gene021489:intron | 50.0% |
| ! | GCAGCTTCAACCCCTCCTTT+TGG | + | chr1.4:11033854-11033873 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 11031529 | 11034095 | 11031529 | ID=MS.gene021489 |
| chr1.4 | mRNA | 11031529 | 11034095 | 11031529 | ID=MS.gene021489.t1;Parent=MS.gene021489 |
| chr1.4 | exon | 11033064 | 11034095 | 11033064 | ID=MS.gene021489.t1.exon1;Parent=MS.gene021489.t1 |
| chr1.4 | CDS | 11033064 | 11034095 | 11033064 | ID=cds.MS.gene021489.t1;Parent=MS.gene021489.t1 |
| chr1.4 | exon | 11032527 | 11032970 | 11032527 | ID=MS.gene021489.t1.exon2;Parent=MS.gene021489.t1 |
| chr1.4 | CDS | 11032527 | 11032970 | 11032527 | ID=cds.MS.gene021489.t1;Parent=MS.gene021489.t1 |
| chr1.4 | exon | 11032209 | 11032451 | 11032209 | ID=MS.gene021489.t1.exon3;Parent=MS.gene021489.t1 |
| chr1.4 | CDS | 11032209 | 11032451 | 11032209 | ID=cds.MS.gene021489.t1;Parent=MS.gene021489.t1 |
| chr1.4 | exon | 11031637 | 11031989 | 11031637 | ID=MS.gene021489.t1.exon4;Parent=MS.gene021489.t1 |
| chr1.4 | CDS | 11031637 | 11031989 | 11031637 | ID=cds.MS.gene021489.t1;Parent=MS.gene021489.t1 |
| chr1.4 | exon | 11031529 | 11031550 | 11031529 | ID=MS.gene021489.t1.exon5;Parent=MS.gene021489.t1 |
| chr1.4 | CDS | 11031529 | 11031550 | 11031529 | ID=cds.MS.gene021489.t1;Parent=MS.gene021489.t1 |
| Gene Sequence |
| Protein sequence |
