AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene021500

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene021500.t1 MTR_1g008740 97.790 362 7 1 1 361 1 362 0.0 739
MS.gene021500.t1 MTR_1g008740 97.701 348 7 1 15 361 1 348 0.0 710
MS.gene021500.t1 MTR_3g109340 59.893 374 114 15 8 361 1 358 2.54e-123 359
MS.gene021500.t1 MTR_3g109340 59.626 374 114 16 8 361 1 357 1.40e-120 352
MS.gene021500.t1 MTR_6g084430 75.625 160 35 3 24 183 2 157 1.15e-81 252
MS.gene021500.t1 MTR_2g078700 72.903 155 38 2 27 178 23 176 5.97e-80 249
MS.gene021500.t1 MTR_4g108760 65.882 170 52 3 17 183 7 173 1.56e-76 240
MS.gene021500.t1 MTR_3g435150 65.476 168 51 4 20 183 8 172 1.29e-74 233
MS.gene021500.t1 MTR_6g032770 62.941 170 59 2 27 193 18 186 4.06e-73 232
MS.gene021500.t1 MTR_7g085260 64.535 172 54 4 27 193 17 186 3.08e-72 229
MS.gene021500.t1 MTR_6g012670 61.326 181 60 5 6 183 3 176 7.73e-72 227
MS.gene021500.t1 MTR_3g116070 70.073 137 41 0 21 157 17 153 3.10e-69 221
MS.gene021500.t1 MTR_3g070030 63.975 161 51 3 27 183 19 176 1.55e-67 216
MS.gene021500.t1 MTR_7g011130 59.412 170 50 3 30 183 22 188 1.13e-63 206
MS.gene021500.t1 MTR_7g011120 51.442 208 83 5 27 221 8 210 2.10e-60 197
MS.gene021500.t1 MTR_2g064470 57.485 167 62 4 24 187 8 168 4.24e-60 196
MS.gene021500.t1 MTR_1g069805 52.830 159 71 2 19 177 2 156 3.36e-58 190
MS.gene021500.t1 MTR_2g062730 47.826 207 95 7 24 225 7 205 3.36e-57 189
MS.gene021500.t1 MTR_4g035590 59.740 154 54 4 27 177 8 156 1.78e-56 188
MS.gene021500.t1 MTR_7g097090 46.829 205 100 3 19 223 2 197 1.79e-56 186
MS.gene021500.t1 MTR_2g080010 50.575 174 67 3 20 178 8 177 3.71e-55 184
MS.gene021500.t1 MTR_4g036030 56.494 154 60 4 27 177 7 156 3.73e-55 184
MS.gene021500.t1 MTR_4g101680 56.494 154 60 4 27 177 7 156 9.66e-55 184
MS.gene021500.t1 MTR_7g085220 48.663 187 77 4 24 195 5 187 1.14e-54 183
MS.gene021500.t1 MTR_5g041940 50.000 180 72 5 27 193 3 177 1.26e-54 180
MS.gene021500.t1 MTR_5g012080 54.545 154 65 3 27 177 7 158 2.12e-54 182
MS.gene021500.t1 MTR_3g088110 52.907 172 67 4 24 188 4 168 2.19e-54 181
MS.gene021500.t1 MTR_7g100990 51.807 166 74 2 17 177 1 165 3.00e-54 181
MS.gene021500.t1 MTR_8g059170 52.381 168 73 4 26 189 13 177 5.47e-54 181
MS.gene021500.t1 MTR_2g079990 54.037 161 66 4 26 183 15 170 9.50e-54 181
MS.gene021500.t1 MTR_6g477900 55.769 156 63 4 27 179 6 158 1.35e-53 177
MS.gene021500.t1 MTR_2g064090 57.595 158 58 6 26 178 5 158 1.95e-53 180
MS.gene021500.t1 MTR_8g024480 48.370 184 79 4 24 194 12 192 3.29e-53 182
MS.gene021500.t1 MTR_2157s0010 52.761 163 65 3 27 178 8 169 3.33e-53 177
MS.gene021500.t1 MTR_5g021710 52.229 157 68 4 24 177 5 157 3.63e-53 179
MS.gene021500.t1 MTR_4g089135 46.701 197 66 5 27 196 15 199 7.39e-53 178
MS.gene021500.t1 MTR_3g070040 52.459 183 75 6 31 207 12 188 1.32e-52 177
MS.gene021500.t1 MTR_3g064580 56.051 157 62 4 26 178 5 158 1.78e-52 184
MS.gene021500.t1 MTR_5g076850 56.410 156 62 4 26 178 5 157 3.19e-52 183
MS.gene021500.t1 MTR_1g096430 51.534 163 72 4 24 183 4 162 6.95e-52 176
MS.gene021500.t1 MTR_2g093810 47.179 195 82 4 26 203 13 203 1.32e-51 174
MS.gene021500.t1 MTR_8g094580 50.289 173 73 5 17 184 1 165 1.37e-51 173
MS.gene021500.t1 MTR_4g081870 50.289 173 72 5 17 182 1 166 1.50e-51 172
MS.gene021500.t1 MTR_8g076110 48.765 162 76 4 24 182 3 160 1.74e-51 174
MS.gene021500.t1 MTR_7g005280 49.730 185 72 6 24 195 12 188 3.98e-51 171
MS.gene021500.t1 MTR_0036s0150 52.866 157 70 2 29 183 7 161 7.35e-50 175
MS.gene021500.t1 MTR_2g079990 44.920 187 71 3 26 183 15 198 4.60e-49 169
MS.gene021500.t1 MTR_3g096920 48.235 170 80 4 24 189 4 169 9.19e-49 166
MS.gene021500.t1 MTR_1g090723 50.318 157 74 2 29 183 10 164 1.63e-48 172
MS.gene021500.t1 MTR_1g090723 50.318 157 74 2 29 183 10 164 2.21e-48 172
MS.gene021500.t1 MTR_8g467490 45.665 173 83 3 16 178 3 174 8.01e-47 164
MS.gene021500.t1 MTR_1g090723 50.000 158 74 3 29 183 10 165 9.89e-47 168
MS.gene021500.t1 MTR_5g014300 49.693 163 72 5 26 181 5 164 2.08e-46 161
MS.gene021500.t1 MTR_3g093050 54.194 155 65 4 26 177 21 172 8.68e-45 162
MS.gene021500.t1 MTR_5g040420 45.122 164 80 2 24 178 11 173 9.10e-45 158
MS.gene021500.t1 MTR_4g098630 44.974 189 84 6 17 196 1 178 1.40e-44 156
MS.gene021500.t1 MTR_3g093050 54.194 155 65 4 26 177 21 172 1.43e-44 162
MS.gene021500.t1 MTR_6g011860 43.017 179 86 4 10 178 2 174 8.88e-44 155
MS.gene021500.t1 MTR_3g096920 55.303 132 55 2 24 155 4 131 1.23e-43 154
MS.gene021500.t1 MTR_5g069030 52.597 154 67 4 27 177 25 175 2.01e-43 159
MS.gene021500.t1 MTR_4g134460 45.732 164 85 4 23 186 50 209 1.44e-42 153
MS.gene021500.t1 MTR_3g096140 49.342 152 71 4 29 177 9 157 2.36e-42 149
MS.gene021500.t1 MTR_1g090720 50.311 161 68 4 26 177 41 198 3.61e-42 153
MS.gene021500.t1 MTR_3g093040 50.323 155 71 4 26 177 107 258 3.88e-42 149
MS.gene021500.t1 MTR_3g096140 48.701 154 73 4 29 179 9 159 1.07e-41 149
MS.gene021500.t1 MTR_5g090970 40.571 175 92 3 21 184 12 185 1.17e-41 148
MS.gene021500.t1 MTR_1g097300 50.000 160 70 6 29 183 21 175 9.51e-41 151
MS.gene021500.t1 MTR_2g086880 44.509 173 84 5 29 200 20 181 1.20e-40 150
MS.gene021500.t1 MTR_2g086880 44.509 173 84 5 29 200 20 181 1.21e-40 151
MS.gene021500.t1 MTR_5g090970 40.571 175 91 4 21 184 12 184 4.79e-40 144
MS.gene021500.t1 MTR_4g075980 43.125 160 85 3 24 182 12 166 6.20e-39 140
MS.gene021500.t1 MTR_2g068880 39.683 189 97 5 11 183 5 192 1.07e-38 140
MS.gene021500.t1 MTR_8g099750 36.199 221 118 5 27 231 14 227 1.21e-38 137
MS.gene021500.t1 MTR_8g063550 45.455 154 78 4 27 177 6 156 1.60e-38 140
MS.gene021500.t1 MTR_2g068920 38.830 188 99 4 11 183 5 191 3.63e-38 138
MS.gene021500.t1 MTR_8g063550 45.455 154 78 4 27 177 6 156 3.64e-38 142
MS.gene021500.t1 MTR_8g063550 45.455 154 78 4 27 177 6 156 4.01e-38 141
MS.gene021500.t1 MTR_8g093580 43.506 154 81 4 27 177 6 156 4.28e-36 137
MS.gene021500.t1 MTR_3g098810 38.605 215 109 8 27 231 14 215 4.32e-36 131
MS.gene021500.t1 MTR_8g023840 44.667 150 76 3 27 174 11 155 9.23e-34 129
MS.gene021500.t1 MTR_4g052620 44.444 135 70 2 24 154 2 135 1.31e-33 125
MS.gene021500.t1 MTR_3g096140 45.714 140 70 4 43 179 2 138 3.36e-32 123
MS.gene021500.t1 MTR_3g098810 43.972 141 74 3 27 165 14 151 7.12e-32 118
MS.gene021500.t1 MTR_8g094580 52.212 113 46 3 77 184 2 111 7.50e-32 120
MS.gene021500.t1 MTR_8g023900 41.026 156 87 3 25 178 10 162 2.90e-31 123
MS.gene021500.t1 MTR_8g023900 37.566 189 100 6 1 177 158 340 6.26e-30 119
MS.gene021500.t1 MTR_8g023860 45.736 129 67 2 27 153 12 139 4.25e-31 122
MS.gene021500.t1 MTR_4g094302 39.752 161 77 4 27 178 11 160 7.20e-31 116
MS.gene021500.t1 MTR_2g086690 42.143 140 69 4 28 159 5 140 8.09e-31 117
MS.gene021500.t1 MTR_8g023930 40.260 154 85 3 27 178 24 172 1.93e-30 121
MS.gene021500.t1 MTR_4g094302 43.511 131 61 3 27 155 11 130 2.50e-30 114
MS.gene021500.t1 MTR_7g105170 36.257 171 97 5 25 184 2 171 2.95e-30 116
MS.gene021500.t1 MTR_8g023880 40.698 172 77 6 22 177 2 164 2.59e-29 114
MS.gene021500.t1 MTR_7g070140 55.696 79 35 0 82 160 18 96 1.40e-25 100
MS.gene021500.t1 MTR_8g093790 41.060 151 67 5 27 177 10 138 6.23e-23 94.7
MS.gene021500.t1 MTR_3g096400 35.912 181 92 7 27 194 7 176 6.89e-22 92.8
MS.gene021500.t1 MTR_7g083360 35.821 134 79 5 24 155 7 135 2.21e-18 81.6
MS.gene021500.t1 MTR_7g083330 34.351 131 79 5 27 155 18 143 3.17e-17 79.3
MS.gene021500.t1 MTR_7g083370 32.090 134 84 4 24 155 7 135 8.37e-15 71.2
MS.gene021500.t1 MTR_7g070150 49.296 71 34 1 120 190 2 70 1.46e-14 68.9
MS.gene021500.t1 MTR_2g090735 34.118 170 85 8 27 178 49 209 6.80e-14 71.6
MS.gene021500.t1 MTR_8g102240 30.994 171 90 6 27 175 47 211 1.53e-12 68.9
MS.gene021500.t1 MTR_8g102240 30.994 171 90 6 27 175 47 211 1.53e-12 68.9
MS.gene021500.t1 MTR_1g093680 28.708 209 118 9 27 217 58 253 3.86e-11 64.7
MS.gene021500.t1 MTR_7g116460 30.000 180 112 8 33 205 11 183 5.52e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene021500.t1 AT2G24430 51.966 356 102 9 21 358 10 314 1.34e-104 310
MS.gene021500.t1 AT2G24430 51.966 356 102 9 21 358 10 314 1.34e-104 310
MS.gene021500.t1 AT3G18400 73.750 160 39 2 24 183 2 158 2.28e-82 253
MS.gene021500.t1 AT5G53950 71.250 160 42 2 25 181 15 173 2.38e-79 248
MS.gene021500.t1 AT5G61430 67.647 170 49 3 22 188 11 177 1.03e-76 239
MS.gene021500.t1 AT3G15170 70.000 160 44 2 22 178 15 173 4.74e-76 237
MS.gene021500.t1 AT5G07680 68.485 165 46 3 27 188 3 164 5.83e-76 237
MS.gene021500.t1 AT5G07680 64.641 181 54 4 15 188 1 178 6.17e-76 238
MS.gene021500.t1 AT1G76420 64.671 167 58 1 16 182 11 176 1.00e-73 232
MS.gene021500.t1 AT5G39610 63.043 184 54 5 22 202 15 187 1.21e-72 228
MS.gene021500.t1 AT5G18270 69.481 154 42 3 27 177 21 172 2.08e-70 223
MS.gene021500.t1 AT5G18270 68.831 154 43 3 27 177 21 172 8.35e-70 222
MS.gene021500.t1 AT3G29035 61.202 183 64 4 8 186 5 184 5.42e-69 219
MS.gene021500.t1 AT3G04060 60.773 181 61 4 18 195 11 184 7.26e-68 217
MS.gene021500.t1 AT4G27410 53.216 171 70 5 19 183 2 168 1.61e-58 192
MS.gene021500.t1 AT3G12977 48.058 206 85 6 24 214 15 213 2.93e-58 190
MS.gene021500.t1 AT4G10350 59.355 155 56 4 27 177 9 160 4.06e-57 189
MS.gene021500.t1 AT1G56010 39.716 282 145 9 24 291 16 286 1.36e-56 187
MS.gene021500.t1 AT1G33280 59.740 154 54 4 27 177 8 156 1.63e-56 187
MS.gene021500.t1 AT1G12260 54.430 158 65 4 27 181 7 160 5.28e-55 184
MS.gene021500.t1 AT4G27410 48.936 188 69 6 19 183 2 185 5.44e-55 183
MS.gene021500.t1 AT2G18060 35.185 324 181 9 26 331 8 320 5.66e-55 184
MS.gene021500.t1 AT2G18060 35.185 324 181 9 26 331 8 320 5.66e-55 184
MS.gene021500.t1 AT1G12260 54.430 158 65 4 27 181 7 160 7.36e-55 185
MS.gene021500.t1 AT1G62700 55.063 158 64 4 27 181 7 160 3.45e-54 183
MS.gene021500.t1 AT1G62700 55.063 158 64 4 27 181 7 160 3.45e-54 183
MS.gene021500.t1 AT1G69490 53.659 164 68 4 24 182 6 166 3.71e-54 179
MS.gene021500.t1 AT3G04070 50.847 177 75 4 20 185 3 178 3.76e-54 182
MS.gene021500.t1 AT1G65910 55.280 161 66 4 26 183 5 162 3.83e-54 188
MS.gene021500.t1 AT4G28530 48.851 174 71 2 19 177 2 172 4.69e-54 182
MS.gene021500.t1 AT3G10500 56.522 161 64 4 26 183 8 165 5.71e-54 186
MS.gene021500.t1 AT1G52890 53.459 159 70 3 26 183 13 168 1.23e-53 179
MS.gene021500.t1 AT1G61110 51.479 169 67 4 27 182 16 182 1.50e-53 179
MS.gene021500.t1 AT4G36160 53.548 155 65 4 26 177 9 159 1.69e-53 181
MS.gene021500.t1 AT4G36160 53.548 155 65 4 26 177 9 159 1.69e-53 181
MS.gene021500.t1 AT4G36160 53.548 155 65 4 26 177 13 163 1.70e-53 181
MS.gene021500.t1 AT1G71930 51.592 157 69 4 24 177 6 158 2.38e-53 179
MS.gene021500.t1 AT1G71930 51.592 157 69 4 24 177 6 158 2.38e-53 179
MS.gene021500.t1 AT1G01720 53.086 162 67 4 27 183 7 164 2.97e-53 177
MS.gene021500.t1 AT3G15500 53.459 159 70 3 26 183 13 168 4.63e-53 178
MS.gene021500.t1 AT5G62380 52.795 161 69 4 27 184 7 163 6.79e-53 179
MS.gene021500.t1 AT5G62380 52.795 161 69 4 27 184 7 163 6.79e-53 179
MS.gene021500.t1 AT3G17730 55.844 154 62 4 27 177 6 156 8.75e-53 175
MS.gene021500.t1 AT3G03200 57.051 156 60 4 26 177 5 157 9.65e-53 181
MS.gene021500.t1 AT3G61910 47.802 182 75 4 24 188 8 186 1.13e-52 177
MS.gene021500.t1 AT2G46770 50.877 171 64 5 24 177 13 180 1.22e-52 178
MS.gene021500.t1 AT5G04410 55.280 161 66 4 26 183 8 165 3.10e-52 182
MS.gene021500.t1 AT3G04070 46.632 193 75 4 20 185 3 194 9.95e-52 176
MS.gene021500.t1 AT1G79580 56.410 156 59 5 26 177 16 166 1.01e-51 176
MS.gene021500.t1 AT1G79580 56.410 156 59 5 26 177 16 166 1.01e-51 176
MS.gene021500.t1 AT1G79580 56.410 156 59 5 26 177 16 166 1.01e-51 176
MS.gene021500.t1 AT1G79580 56.410 156 59 5 26 177 16 166 1.01e-51 176
MS.gene021500.t1 AT1G79580 56.410 156 59 5 26 177 16 166 1.01e-51 176
MS.gene021500.t1 AT5G66300 51.613 155 69 3 26 177 11 162 1.25e-51 174
MS.gene021500.t1 AT5G17260 56.410 156 61 4 26 177 5 157 1.38e-51 178
MS.gene021500.t1 AT5G08790 52.096 167 70 4 24 184 4 166 1.63e-51 173
MS.gene021500.t1 AT5G63790 52.976 168 67 5 24 184 47 209 6.10e-51 172
MS.gene021500.t1 AT5G63790 52.976 168 67 5 24 184 57 219 6.62e-51 172
MS.gene021500.t1 AT3G10490 52.727 165 69 5 19 178 19 179 2.33e-49 166
MS.gene021500.t1 AT3G10480 56.329 158 58 6 26 177 26 178 6.57e-49 171
MS.gene021500.t1 AT1G77450 51.220 164 66 4 27 183 10 166 6.86e-49 165
MS.gene021500.t1 AT1G32770 48.810 168 69 5 24 177 13 177 1.21e-48 167
MS.gene021500.t1 AT3G15510 47.305 167 69 3 31 182 21 183 1.59e-48 167
MS.gene021500.t1 AT3G10480 55.128 156 62 5 26 177 26 177 2.50e-48 169
MS.gene021500.t1 AT5G61430 67.826 115 32 2 77 188 2 114 2.66e-48 164
MS.gene021500.t1 AT5G46590 51.282 156 70 4 26 177 5 158 6.59e-48 164
MS.gene021500.t1 AT3G10490 53.049 164 68 5 19 177 19 178 8.53e-48 168
MS.gene021500.t1 AT5G46590 56.818 132 53 3 26 155 5 134 9.69e-48 163
MS.gene021500.t1 AT4G17980 51.572 159 67 4 26 177 5 160 1.00e-47 162
MS.gene021500.t1 AT5G13180 50.318 157 73 3 27 182 14 166 2.42e-47 161
MS.gene021500.t1 AT1G33060 52.500 160 70 4 25 181 22 178 2.50e-47 170
MS.gene021500.t1 AT1G33060 52.500 160 70 4 25 181 22 178 2.51e-47 170
MS.gene021500.t1 AT1G54330 52.795 161 67 5 26 183 5 159 2.60e-47 162
MS.gene021500.t1 AT4G17980 51.572 159 67 4 26 177 5 160 2.98e-47 162
MS.gene021500.t1 AT4G35580 53.846 156 66 4 25 177 7 159 9.65e-47 166
MS.gene021500.t1 AT4G35580 53.846 156 66 4 25 177 7 159 1.07e-46 166
MS.gene021500.t1 AT4G35580 53.846 156 66 4 25 177 7 159 1.10e-46 166
MS.gene021500.t1 AT1G52880 50.932 161 61 4 31 177 21 177 2.87e-45 158
MS.gene021500.t1 AT1G26870 43.429 175 88 2 14 178 3 176 3.51e-45 160
MS.gene021500.t1 AT1G34180 50.000 158 73 4 29 183 18 172 1.03e-44 159
MS.gene021500.t1 AT5G39820 41.489 188 85 4 14 178 7 192 1.69e-44 156
MS.gene021500.t1 AT2G02450 47.561 164 82 4 29 192 53 212 3.18e-44 157
MS.gene021500.t1 AT2G02450 47.561 164 82 4 29 192 53 212 3.22e-44 157
MS.gene021500.t1 AT1G34190 50.000 158 73 4 29 183 18 172 6.27e-44 159
MS.gene021500.t1 AT1G34180 50.000 158 73 4 29 183 18 172 7.92e-44 159
MS.gene021500.t1 AT2G33480 50.658 152 68 4 27 177 15 160 2.69e-43 151
MS.gene021500.t1 AT3G10480 47.120 191 57 7 26 177 26 211 5.02e-43 156
MS.gene021500.t1 AT5G24590 45.652 184 91 5 26 202 12 193 5.94e-43 155
MS.gene021500.t1 AT3G49530 50.000 156 73 4 25 177 11 164 7.33e-43 154
MS.gene021500.t1 AT1G34180 46.471 170 73 4 29 183 18 184 9.22e-43 154
MS.gene021500.t1 AT2G43000 42.945 163 88 3 22 182 13 172 9.40e-43 150
MS.gene021500.t1 AT2G33480 50.000 156 61 5 27 177 15 158 1.66e-42 149
MS.gene021500.t1 AT3G49530 50.314 159 68 5 25 177 11 164 1.68e-42 154
MS.gene021500.t1 AT5G64060 46.154 156 78 4 27 179 6 158 3.16e-42 150
MS.gene021500.t1 AT5G09330 50.000 154 71 4 27 177 6 156 3.97e-42 153
MS.gene021500.t1 AT5G09330 50.000 154 71 4 27 177 6 156 3.97e-42 153
MS.gene021500.t1 AT5G09330 50.000 154 71 4 27 177 6 156 3.97e-42 153
MS.gene021500.t1 AT5G09330 50.000 154 71 4 27 177 6 156 3.97e-42 153
MS.gene021500.t1 AT5G09330 50.000 154 71 4 27 177 6 156 3.97e-42 153
MS.gene021500.t1 AT1G34180 46.471 170 73 4 29 183 18 184 5.75e-42 154
MS.gene021500.t1 AT1G32870 48.370 184 78 7 7 183 29 202 1.63e-41 153
MS.gene021500.t1 AT2G27300 49.032 155 68 5 26 179 13 157 4.11e-41 147
MS.gene021500.t1 AT1G32870 51.235 162 69 5 27 183 10 166 4.19e-41 151
MS.gene021500.t1 AT1G32870 51.235 162 69 5 27 183 10 166 4.73e-41 151
MS.gene021500.t1 AT1G32510 45.783 166 80 4 27 183 6 170 1.54e-40 144
MS.gene021500.t1 AT2G17040 43.226 155 82 3 29 182 8 157 5.35e-40 143
MS.gene021500.t1 AT5G22290 44.578 166 79 5 26 190 20 173 1.39e-38 140
MS.gene021500.t1 AT1G56010 37.991 229 117 9 77 291 2 219 5.59e-37 134
MS.gene021500.t1 AT3G12977 47.059 153 60 5 77 214 14 160 1.11e-36 132
MS.gene021500.t1 AT3G12910 38.378 185 95 6 18 184 9 192 6.32e-36 132
MS.gene021500.t1 AT4G28530 47.059 136 57 1 19 139 2 137 1.19e-35 132
MS.gene021500.t1 AT3G44290 48.413 126 61 3 29 153 16 138 2.05e-35 129
MS.gene021500.t1 AT4G10350 57.798 109 40 3 73 177 7 113 2.85e-35 130
MS.gene021500.t1 AT3G44290 40.556 180 87 6 29 203 16 180 1.13e-34 130
MS.gene021500.t1 AT5G04395 44.371 151 69 3 19 155 20 169 1.36e-33 123
MS.gene021500.t1 AT3G44350 35.542 166 100 3 25 184 3 167 3.03e-27 108
MS.gene021500.t1 AT5G64530 36.782 174 78 6 27 183 3 161 1.03e-26 105
MS.gene021500.t1 AT5G64530 42.748 131 58 4 27 155 3 118 1.59e-26 103
MS.gene021500.t1 AT2G33480 54.167 96 41 2 83 177 10 103 3.64e-26 104
MS.gene021500.t1 AT3G44350 38.462 143 83 2 25 163 3 144 1.06e-25 101
MS.gene021500.t1 AT1G02230 43.846 130 66 5 28 153 4 130 2.14e-25 105
MS.gene021500.t1 AT4G01550 37.748 151 87 3 30 177 7 153 1.83e-24 104
MS.gene021500.t1 AT3G04420 39.416 137 78 3 28 161 4 138 2.56e-24 101
MS.gene021500.t1 AT3G04420 40.602 133 74 3 28 157 4 134 4.01e-24 101
MS.gene021500.t1 AT4G01520 33.696 184 114 4 28 207 5 184 5.40e-24 100
MS.gene021500.t1 AT5G22380 40.152 132 67 4 30 153 8 135 8.36e-24 98.6
MS.gene021500.t1 AT4G01540 35.669 157 93 4 30 182 7 159 1.28e-23 101
MS.gene021500.t1 AT4G01540 35.669 157 93 4 30 182 7 159 2.04e-23 100
MS.gene021500.t1 AT4G01540 35.669 157 93 4 30 182 7 159 2.57e-23 100
MS.gene021500.t1 AT4G01540 35.669 157 93 4 30 182 7 159 3.41e-23 100
MS.gene021500.t1 AT1G02250 38.462 130 73 4 28 153 4 130 1.25e-21 95.1
MS.gene021500.t1 AT3G10490 56.962 79 30 2 101 177 2 78 1.02e-20 92.4
MS.gene021500.t1 AT3G10490 56.962 79 30 2 101 177 2 78 1.02e-20 92.4
MS.gene021500.t1 AT1G02220 37.984 129 72 4 28 153 4 127 4.13e-20 91.3
MS.gene021500.t1 AT2G18060 34.266 143 89 3 106 246 2 141 6.17e-20 89.0
MS.gene021500.t1 AT2G43000 41.758 91 49 2 89 177 1 89 8.06e-19 84.0
MS.gene021500.t1 AT1G01010 37.594 133 72 5 30 153 6 136 8.17e-18 84.7
MS.gene021500.t1 AT3G04430 33.775 151 84 5 33 169 6 154 2.47e-16 77.0
MS.gene021500.t1 AT5G50820 32.192 146 72 6 27 162 17 145 4.62e-15 73.6
MS.gene021500.t1 AT5G14000 33.125 160 97 6 27 183 15 167 1.39e-14 72.4
MS.gene021500.t1 AT5G22290 45.238 84 35 3 107 190 2 74 4.10e-14 71.6
MS.gene021500.t1 AT5G14000 32.857 140 87 4 27 164 15 149 1.53e-13 68.2
MS.gene021500.t1 AT3G56530 30.612 147 98 3 23 167 48 192 4.36e-13 69.7
MS.gene021500.t1 AT5G56620 31.429 175 88 7 27 175 43 211 5.05e-12 67.0
MS.gene021500.t1 AT5G56620 31.429 175 88 7 27 175 43 211 5.34e-12 67.0
MS.gene021500.t1 AT5G56620 31.818 176 86 8 27 175 43 211 7.45e-12 66.6
MS.gene021500.t1 AT3G55210 27.647 170 105 5 26 182 10 174 2.06e-11 64.3

Find 100 sgRNAs with CRISPR-Local

Find 167 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAGAAGGATTCACCATTTC+AGG 0.161758 1.4:-10904257 MS.gene021500:CDS
CCAACAATGATGCAGCATTT+AGG 0.221902 1.4:-10904398 MS.gene021500:CDS
CTAAGGGTGATGATGATAAA+TGG 0.225370 1.4:+10904282 None:intergenic
GTTGGTTCTTATACTGGATT+TGG 0.259797 1.4:+10905609 None:intergenic
TACCTTGTTGGTTCTTATAC+TGG 0.266381 1.4:+10905603 None:intergenic
GCTACTCATTTCCAGCTCTA+TGG 0.284860 1.4:-10904365 MS.gene021500:CDS
CAACAATGATGCAGCATTTA+GGG 0.296732 1.4:-10904397 MS.gene021500:CDS
TAGCAAAGAAAGGAAGGATT+TGG 0.310503 1.4:-10906637 MS.gene021500:CDS
GCCATCAACTACTCATACTA+TGG 0.320155 1.4:-10904180 MS.gene021500:CDS
GTGTGGATCTTGATCATTAC+TGG 0.322379 1.4:-10903998 MS.gene021500:CDS
TCAGGGCTTAATTTGAATCT+TGG 0.354521 1.4:-10904239 MS.gene021500:CDS
CAACAGTGTTACATCAGAAT+TGG 0.355460 1.4:-10905722 MS.gene021500:CDS
GAGCAACAAACACTGGATAT+TGG 0.356961 1.4:-10905774 MS.gene021500:CDS
AATAATAATAACTTAGGGTT+TGG 0.365351 1.4:-10904095 MS.gene021500:CDS
GCAGAGAATAATAATAACTT+AGG 0.389630 1.4:-10904101 MS.gene021500:CDS
TGCGAGCCATGGGAGCTTCC+AGG 0.393548 1.4:-10906459 MS.gene021500:intron
GTACAATATGCAGGGTACTA+TGG 0.400982 1.4:-10904027 MS.gene021500:CDS
AATTATATAATATACCTTGT+TGG 0.426634 1.4:+10905591 None:intergenic
ATTCAAATTAAGCCCTGAAA+TGG 0.426887 1.4:+10904244 None:intergenic
GGTTGGTATGAAGAAAACTT+TGG 0.429083 1.4:-10905701 MS.gene021500:CDS
AATAATAACTTAGGGTTTGG+TGG 0.433273 1.4:-10904092 MS.gene021500:CDS
GACCAACTTCTAGATTGATA+TGG 0.439869 1.4:+10904450 None:intergenic
GTAAGATTTGAAGAAGAAGA+AGG 0.440782 1.4:+10904494 None:intergenic
CATTTATCATCATCACCCTT+AGG 0.446380 1.4:-10904281 MS.gene021500:CDS
CTATTAGTTCTCACACCTGT+TGG 0.449944 1.4:+10905796 None:intergenic
AGTTGTTAGCAAAGAAAGGA+AGG 0.451453 1.4:-10906643 MS.gene021500:CDS
CAAACCCTACTCATGGCAAT+AGG 0.453517 1.4:-10904049 MS.gene021500:CDS
GGTGAATCCTTCTCCTCCTA+AGG 0.457239 1.4:+10904265 None:intergenic
TAAGGGTGATGATGATAAAT+GGG 0.459246 1.4:+10904283 None:intergenic
TTCTTATACTGGATTTGGAA+TGG 0.468387 1.4:+10905614 None:intergenic
TGGCAATAGGTACAATATGC+AGG 0.471195 1.4:-10904036 MS.gene021500:CDS
GGGCTTAATTTGAATCTTGG+AGG 0.471334 1.4:-10904236 MS.gene021500:CDS
AGAGTATTCCGCAAGAGTGC+AGG 0.472263 1.4:-10904530 MS.gene021500:CDS
AGAAAGGAAGGATTTGGAAA+TGG 0.473442 1.4:-10906631 MS.gene021500:CDS
TATATATGCAGCAGGATGAA+TGG 0.479522 1.4:-10904562 MS.gene021500:intron
TACCATATCAATCTAGAAGT+TGG 0.481646 1.4:-10904452 MS.gene021500:CDS
GCCATAGTATGAGTAGTTGA+TGG 0.484673 1.4:+10904179 None:intergenic
AAGAAGTTGTTAGCAAAGAA+AGG 0.487064 1.4:-10906647 MS.gene021500:CDS
TATAGTTCCTTCCATAGAGC+TGG 0.487958 1.4:+10904354 None:intergenic
GATGACTTTGCTTACTTGCA+TGG 0.489341 1.4:+10906845 None:intergenic
CTAGAGGAGAGAAAACCAAC+TGG 0.491009 1.4:-10905657 MS.gene021500:CDS
GGTAGGATGAAATCGAAATC+CGG 0.491316 1.4:+10906575 None:intergenic
AGAGATCGTAAATATCCAAC+AGG 0.491428 1.4:-10905811 MS.gene021500:CDS
CCTAAATGCTGCATCATTGT+TGG 0.501547 1.4:+10904398 None:intergenic
ATATATGCAGCAGGATGAAT+GGG 0.505037 1.4:-10904561 MS.gene021500:intron
ATTTATAGGGAAGGCCAAGA+TGG 0.507478 1.4:-10905863 MS.gene021500:intron
ATCTCAACAAATGCGAGCCA+TGG 0.513090 1.4:-10906470 MS.gene021500:CDS
ACTTCTAGATTGATATGGTA+AGG 0.513737 1.4:+10904455 None:intergenic
TGTACCTATTGCCATGAGTA+GGG 0.521891 1.4:+10904045 None:intergenic
CAGAGAATAATAATAACTTA+GGG 0.522455 1.4:-10904100 MS.gene021500:CDS
CCAAGATGGGTACAAAAGAA+TGG 0.522857 1.4:-10905849 MS.gene021500:CDS
GGAAGGAACACGTGAGAAAG+AGG 0.523705 1.4:-10906610 MS.gene021500:CDS
AATAACTTAGGGTTTGGTGG+TGG 0.530200 1.4:-10904089 MS.gene021500:CDS
GAAATCGAAATCCGGGAGGT+AGG 0.532076 1.4:+10906583 None:intergenic
TTGTACCTATTGCCATGAGT+AGG 0.535715 1.4:+10904044 None:intergenic
AAATGGGAATATTGATGCAT+TGG 0.541252 1.4:+10904299 None:intergenic
ACTAATAGAGCAACAAACAC+TGG 0.544961 1.4:-10905781 MS.gene021500:CDS
AAATCGAAATCCGGGAGGTA+GGG 0.547523 1.4:+10906584 None:intergenic
TTCAGCTCCAACATGATGAC+AGG 0.548671 1.4:-10904149 MS.gene021500:CDS
TGCTGCATCATTGTTGGTGG+TGG 0.549436 1.4:+10904404 None:intergenic
GAGAAGGATTCACCATTTCA+GGG 0.553123 1.4:-10904256 MS.gene021500:CDS
TCTTTGCACCTGCACTCTTG+CGG 0.553400 1.4:+10904522 None:intergenic
TCATCACCCTTAGGAGGAGA+AGG 0.556810 1.4:-10904272 MS.gene021500:CDS
AAATGCTGCATCATTGTTGG+TGG 0.560573 1.4:+10904401 None:intergenic
TAAGATTTGAAGAAGAAGAA+GGG 0.568739 1.4:+10904495 None:intergenic
ATTATTCTCTGCAGCAACAA+GGG 0.570178 1.4:+10904112 None:intergenic
ATTTGCACCTGTCATCATGT+TGG 0.570618 1.4:+10904142 None:intergenic
GTATGAGTAGTTGATGGCAT+TGG 0.570711 1.4:+10904185 None:intergenic
GTAGGATGAAATCGAAATCC+GGG 0.573405 1.4:+10906576 None:intergenic
TTTATAGGGAAGGCCAAGAT+GGG 0.574283 1.4:-10905862 MS.gene021500:intron
AGGAAGGATTTGGAAATGGA+AGG 0.575195 1.4:-10906627 MS.gene021500:CDS
AAATAAAGTGATCAGTAAGA+AGG 0.577405 1.4:+10903972 None:intergenic
TCTCAACAAATGCGAGCCAT+GGG 0.580584 1.4:-10906469 MS.gene021500:CDS
AATCTCCTTGTCTTTCCCTG+TGG 0.581208 1.4:+10905747 None:intergenic
ACTGGATATTGGAAAACCAC+AGG 0.581954 1.4:-10905763 MS.gene021500:CDS
AAAGAGGAAACCCTACCTCC+CGG 0.588423 1.4:-10906594 MS.gene021500:CDS
CTCATTTCCAGCTCTATGGA+AGG 0.590822 1.4:-10904361 MS.gene021500:CDS
TTATCATCATCACCCTTAGG+AGG 0.591927 1.4:-10904278 MS.gene021500:CDS
TATTATTCTCTGCAGCAACA+AGG 0.597751 1.4:+10904111 None:intergenic
AATAATGCAAACCCTACTCA+TGG 0.598055 1.4:-10904056 MS.gene021500:CDS
GGCATATTATTATTAAAGCT+AGG 0.598474 1.4:+10904425 None:intergenic
AGTGTTACATCAGAATTGGT+TGG 0.599286 1.4:-10905718 MS.gene021500:CDS
GGAAGGAACTATATCAACAC+TGG 0.599703 1.4:-10904344 MS.gene021500:CDS
GTGAATCCTTCTCCTCCTAA+GGG 0.600976 1.4:+10904266 None:intergenic
GTGATGAGTTCTTCATCGGT+AGG 0.602022 1.4:+10906558 None:intergenic
TACAAAGGTCGTGCTCCTAG+AGG 0.602672 1.4:-10905673 MS.gene021500:CDS
GTAAGTGATGAGTTCTTCAT+CGG 0.604469 1.4:+10906554 None:intergenic
CAAAATAGTTTGTGAAGACG+TGG 0.607429 1.4:+10904211 None:intergenic
ATATTCATGCATGACCCAGT+TGG 0.607778 1.4:+10905642 None:intergenic
GGCAATAGGTACAATATGCA+GGG 0.608820 1.4:-10904035 MS.gene021500:CDS
GGGTACTATGGACCATTGTG+TGG 0.616034 1.4:-10904015 MS.gene021500:CDS
TAAAGTGATCAGTAAGAAGG+TGG 0.627141 1.4:+10903975 None:intergenic
CTGGATATTGGAAAACCACA+GGG 0.650427 1.4:-10905762 MS.gene021500:CDS
ATATTATTATTAAAGCTAGG+AGG 0.657871 1.4:+10904428 None:intergenic
TATGCAGCAGGATGAATGGG+TGG 0.662923 1.4:-10904558 MS.gene021500:intron
ATCCAGTATAAGAACCAACA+AGG 0.673356 1.4:-10905605 MS.gene021500:intron
GAAAACCACAGGGAAAGACA+AGG 0.680177 1.4:-10905752 MS.gene021500:CDS
TAGAGGAGAGAAAACCAACT+GGG 0.682123 1.4:-10905656 MS.gene021500:CDS
AATGATCAAGATCCACACAA+TGG 0.714365 1.4:+10904003 None:intergenic
GGATGAAATCGAAATCCGGG+AGG 0.762260 1.4:+10906579 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATACTATATTTAAGAATAA+GGG - chr1.4:10905965-10905984 MS.gene021500:intron 10.0%
!! AGAAAAATTAAAATTAGTTA+TGG - chr1.4:10904651-10904670 MS.gene021500:intron 10.0%
!! ATGAAAAAAATTATGATAAT+AGG - chr1.4:10905307-10905326 MS.gene021500:intron 10.0%
!! TAATACTATATTTAAGAATA+AGG - chr1.4:10905964-10905983 MS.gene021500:intron 10.0%
!! TGAAAAAAATTATGATAATA+GGG - chr1.4:10905308-10905327 MS.gene021500:intron 10.0%
!! TTTATAAAAACAAAAAACTA+GGG - chr1.4:10904555-10904574 MS.gene021500:intron 10.0%
!!! AAAAAAAAGATTTGATTTTT+AGG - chr1.4:10905714-10905733 MS.gene021500:CDS 10.0%
!!! AAAAATTTAAACTTTTTATG+GGG - chr1.4:10905939-10905958 MS.gene021500:intron 10.0%
!!! ACAAAAATTTAAACTTTTTA+TGG - chr1.4:10905937-10905956 MS.gene021500:intron 10.0%
!!! CAAAAATTTAAACTTTTTAT+GGG - chr1.4:10905938-10905957 MS.gene021500:intron 10.0%
!!! TTTTATTTAATTATATAGTG+TGG - chr1.4:10904849-10904868 MS.gene021500:intron 10.0%
!! AACATTTAAAGATGTATAAT+AGG + chr1.4:10905341-10905360 None:intergenic 15.0%
!! AATTATATAATATACCTTGT+TGG + chr1.4:10905238-10905257 None:intergenic 15.0%
!! ACATTTAAAGATGTATAATA+GGG + chr1.4:10905340-10905359 None:intergenic 15.0%
!! ATACTATATTTAAGAATAAG+GGG - chr1.4:10905966-10905985 MS.gene021500:intron 15.0%
!! CTTTATAAAAACAAAAAACT+AGG - chr1.4:10904554-10904573 MS.gene021500:CDS 15.0%
!! GGTTAAGAAAATTAAATATA+GGG + chr1.4:10904061-10904080 None:intergenic 15.0%
!! TAAAAGAAAATTAATATGTC+TGG - chr1.4:10904804-10904823 MS.gene021500:intron 15.0%
!! TTCTTGATAAATGAAAAAAA+GGG + chr1.4:10904454-10904473 None:intergenic 15.0%
!!! AAAGTTGAAGAATTTTTTTT+AGG - chr1.4:10905909-10905928 MS.gene021500:intron 15.0%
!!! AAATTTAAAAGCATGTATAA+AGG + chr1.4:10904083-10904102 None:intergenic 15.0%
!!! AATTTAAAAGCATGTATAAA+GGG + chr1.4:10904082-10904101 None:intergenic 15.0%
!!! ATATTTAGTATCGATATATA+TGG + chr1.4:10904488-10904507 None:intergenic 15.0%
!!! ATTTACTTCAATTTTATAGT+AGG + chr1.4:10905593-10905612 None:intergenic 15.0%
!!! ATTTTAGTTTCTAAAACTTT+TGG - chr1.4:10905751-10905770 MS.gene021500:CDS 15.0%
!!! TAATTTTCTTTTACAAAATG+AGG + chr1.4:10904797-10904816 None:intergenic 15.0%
!!! TTGAAGAAATTTTGTATATA+GGG + chr1.4:10905530-10905549 None:intergenic 15.0%
!!! TTTACTTCAATTTTATAGTA+GGG + chr1.4:10905592-10905611 None:intergenic 15.0%
!!! TTTTTTGTTTTTATAAAGCA+TGG + chr1.4:10904552-10904571 None:intergenic 15.0%
!! AATAATAATAACTTAGGGTT+TGG - chr1.4:10906731-10906750 MS.gene021500:intron 20.0%
!! AATTCATTTCTTAAACTTGT+GGG - chr1.4:10905798-10905817 MS.gene021500:CDS 20.0%
!! ATATTATTATTAAAGCTAGG+AGG + chr1.4:10906401-10906420 None:intergenic 20.0%
!! CAGAGAATAATAATAACTTA+GGG - chr1.4:10906726-10906745 MS.gene021500:intron 20.0%
!! GGGTTAAGAAAATTAAATAT+AGG + chr1.4:10904062-10904081 None:intergenic 20.0%
!! GTTCTTGATAAATGAAAAAA+AGG + chr1.4:10904455-10904474 None:intergenic 20.0%
!! TAATTCATTTCTTAAACTTG+TGG - chr1.4:10905797-10905816 MS.gene021500:CDS 20.0%
!! TTATGTAAAATTTATAGGGA+AGG - chr1.4:10904954-10904973 MS.gene021500:intron 20.0%
!! TTATTCAGACTATTATAAGA+TGG + chr1.4:10905496-10905515 None:intergenic 20.0%
!!! AAAACTTTGGTTTTTTACAA+AGG - chr1.4:10905138-10905157 MS.gene021500:intron 20.0%
!!! ATTTTTTTCCAATACTATGA+CGG + chr1.4:10906024-10906043 None:intergenic 20.0%
!!! GTTGAAGAAATTTTGTATAT+AGG + chr1.4:10905531-10905550 None:intergenic 20.0%
!!! TCTAAAATTTGTATGCTTTT+TGG + chr1.4:10906065-10906084 None:intergenic 20.0%
!!! TTCATACATAAAATTTTACC+TGG + chr1.4:10904388-10904407 None:intergenic 20.0%
!!! TTGGTGACTAAAAATATTAT+AGG + chr1.4:10905562-10905581 None:intergenic 20.0%
! AAGATGAAAGTCATATATTG+TGG + chr1.4:10904714-10904733 None:intergenic 25.0%
! GCAGAGAATAATAATAACTT+AGG - chr1.4:10906725-10906744 MS.gene021500:intron 25.0%
! GGCATATTATTATTAAAGCT+AGG + chr1.4:10906404-10906423 None:intergenic 25.0%
! TAAGATTTGAAGAAGAAGAA+GGG + chr1.4:10906334-10906353 None:intergenic 25.0%
! TAGAGTATATTTGCAAAGTT+TGG + chr1.4:10905637-10905656 None:intergenic 25.0%
! TTTATAGTAGGGATTCAAAT+TGG + chr1.4:10905581-10905600 None:intergenic 25.0%
!! AATTTTACATGCAAAGCAAT+AGG - chr1.4:10904325-10904344 MS.gene021500:CDS 25.0%
!! TTTTATAAAGCATGGATGAA+AGG + chr1.4:10904544-10904563 None:intergenic 25.0%
!!! AATTTGTATGCTTTTTGGAT+TGG + chr1.4:10906060-10906079 None:intergenic 25.0%
!!! TAGTTTTGATGCATTGTTAT+TGG - chr1.4:10906123-10906142 MS.gene021500:intron 25.0%
!!! TGATTTTTAGGTCTAAGTTT+GGG - chr1.4:10905726-10905745 MS.gene021500:CDS 25.0%
!!! TTGATTTTTAGGTCTAAGTT+TGG - chr1.4:10905725-10905744 MS.gene021500:CDS 25.0%
AAATGGGAATATTGATGCAT+TGG + chr1.4:10906530-10906549 None:intergenic 30.0%
AAGAAGTTGTTAGCAAAGAA+AGG - chr1.4:10904179-10904198 MS.gene021500:CDS 30.0%
AATAATAACTTAGGGTTTGG+TGG - chr1.4:10906734-10906753 MS.gene021500:intron 30.0%
ACTTCTAGATTGATATGGTA+AGG + chr1.4:10906374-10906393 None:intergenic 30.0%
ATTCAAATTAAGCCCTGAAA+TGG + chr1.4:10906585-10906604 None:intergenic 30.0%
CTTTCATCTTTCTTGTGATA+TGG - chr1.4:10904724-10904743 MS.gene021500:intron 30.0%
GTAAGATTTGAAGAAGAAGA+AGG + chr1.4:10906335-10906354 None:intergenic 30.0%
TACCATATCAATCTAGAAGT+TGG - chr1.4:10906374-10906393 MS.gene021500:intron 30.0%
TAGCATTCTTCAATACAACA+TGG + chr1.4:10905369-10905388 None:intergenic 30.0%
TCTTTCTTGTGATATGGTTA+AGG - chr1.4:10904730-10904749 MS.gene021500:intron 30.0%
TTCTTATACTGGATTTGGAA+TGG + chr1.4:10905215-10905234 None:intergenic 30.0%
! TAAGGGTGATGATGATAAAT+GGG + chr1.4:10906546-10906565 None:intergenic 30.0%
!! TTTTTGTGTGTTATTCCAGA+AGG - chr1.4:10904153-10904172 MS.gene021500:CDS 30.0%
AATAATGCAAACCCTACTCA+TGG - chr1.4:10906770-10906789 MS.gene021500:intron 35.0%
AATGATCAAGATCCACACAA+TGG + chr1.4:10906826-10906845 None:intergenic 35.0%
ACTAATAGAGCAACAAACAC+TGG - chr1.4:10905045-10905064 MS.gene021500:intron 35.0%
AGAAAGGAAGGATTTGGAAA+TGG - chr1.4:10904195-10904214 MS.gene021500:CDS 35.0%
AGAGATCGTAAATATCCAAC+AGG - chr1.4:10905015-10905034 MS.gene021500:intron 35.0%
AGTGTTACATCAGAATTGGT+TGG - chr1.4:10905108-10905127 MS.gene021500:intron 35.0%
AGTTGTTAGCAAAGAAAGGA+AGG - chr1.4:10904183-10904202 MS.gene021500:CDS 35.0%
ATATATGCAGCAGGATGAAT+GGG - chr1.4:10906265-10906284 MS.gene021500:intron 35.0%
ATCCAGTATAAGAACCAACA+AGG - chr1.4:10905221-10905240 MS.gene021500:intron 35.0%
ATGTCGAATATATATGCAGC+AGG - chr1.4:10906256-10906275 MS.gene021500:intron 35.0%
ATTATTCTCTGCAGCAACAA+GGG + chr1.4:10906717-10906736 None:intergenic 35.0%
CAACAATGATGCAGCATTTA+GGG - chr1.4:10906429-10906448 MS.gene021500:intron 35.0%
CAACAGTGTTACATCAGAAT+TGG - chr1.4:10905104-10905123 MS.gene021500:intron 35.0%
CATTTATCATCATCACCCTT+AGG - chr1.4:10906545-10906564 MS.gene021500:CDS 35.0%
CTAGCATTCACTCTTCTATT+TGG - chr1.4:10905415-10905434 MS.gene021500:intron 35.0%
GACCAACTTCTAGATTGATA+TGG + chr1.4:10906379-10906398 None:intergenic 35.0%
GTAAGTGATGAGTTCTTCAT+CGG + chr1.4:10904275-10904294 None:intergenic 35.0%
TAAATAGACCTCACACAAAG+TGG + chr1.4:10905462-10905481 None:intergenic 35.0%
TAACAACTTCTTTGTCCTTC+TGG + chr1.4:10904171-10904190 None:intergenic 35.0%
TAGCAAAGAAAGGAAGGATT+TGG - chr1.4:10904189-10904208 MS.gene021500:CDS 35.0%
TATATATGCAGCAGGATGAA+TGG - chr1.4:10906264-10906283 MS.gene021500:intron 35.0%
TATTATTCTCTGCAGCAACA+AGG + chr1.4:10906718-10906737 None:intergenic 35.0%
! CAAAATAGTTTGTGAAGACG+TGG + chr1.4:10906618-10906637 None:intergenic 35.0%
! CGTCTTCACAAACTATTTTG+AGG - chr1.4:10906618-10906637 MS.gene021500:CDS 35.0%
! CTAAGGGTGATGATGATAAA+TGG + chr1.4:10906547-10906566 None:intergenic 35.0%
! GGTTGGTATGAAGAAAACTT+TGG - chr1.4:10905125-10905144 MS.gene021500:intron 35.0%
! GTTGGTTCTTATACTGGATT+TGG + chr1.4:10905220-10905239 None:intergenic 35.0%
! TCAGGGCTTAATTTGAATCT+TGG - chr1.4:10906587-10906606 MS.gene021500:CDS 35.0%
!! TACCTTGTTGGTTCTTATAC+TGG + chr1.4:10905226-10905245 None:intergenic 35.0%
AAATGCTGCATCATTGTTGG+TGG + chr1.4:10906428-10906447 None:intergenic 40.0%
ACTGGATATTGGAAAACCAC+AGG - chr1.4:10905063-10905082 MS.gene021500:intron 40.0%
AGGAAGGATTTGGAAATGGA+AGG - chr1.4:10904199-10904218 MS.gene021500:CDS 40.0%
AGTCACAACCGTCATAGTAT+TGG - chr1.4:10906013-10906032 MS.gene021500:intron 40.0%
ATATTCATGCATGACCCAGT+TGG + chr1.4:10905187-10905206 None:intergenic 40.0%
ATTTATAGGGAAGGCCAAGA+TGG - chr1.4:10904963-10904982 MS.gene021500:intron 40.0%
ATTTGCACCTGTCATCATGT+TGG + chr1.4:10906687-10906706 None:intergenic 40.0%
CATGTATGTGTGTGTGTTTC+TGG + chr1.4:10906206-10906225 None:intergenic 40.0%
CCAACAATGATGCAGCATTT+AGG - chr1.4:10906428-10906447 MS.gene021500:intron 40.0%
CCAAGATGGGTACAAAAGAA+TGG - chr1.4:10904977-10904996 MS.gene021500:intron 40.0%
CCTAAATGCTGCATCATTGT+TGG + chr1.4:10906431-10906450 None:intergenic 40.0%
CTGGATATTGGAAAACCACA+GGG - chr1.4:10905064-10905083 MS.gene021500:intron 40.0%
GAGAAGGATTCACCATTTCA+GGG - chr1.4:10906570-10906589 MS.gene021500:CDS 40.0%
GAGCAACAAACACTGGATAT+TGG - chr1.4:10905052-10905071 MS.gene021500:intron 40.0%
GCCATAGTATGAGTAGTTGA+TGG + chr1.4:10906650-10906669 None:intergenic 40.0%
GCCATCAACTACTCATACTA+TGG - chr1.4:10906646-10906665 MS.gene021500:CDS 40.0%
GGAAGGAACTATATCAACAC+TGG - chr1.4:10906482-10906501 MS.gene021500:CDS 40.0%
GGCAATAGGTACAATATGCA+GGG - chr1.4:10906791-10906810 MS.gene021500:intron 40.0%
GGTAGGATGAAATCGAAATC+CGG + chr1.4:10904254-10904273 None:intergenic 40.0%
GTAGGATGAAATCGAAATCC+GGG + chr1.4:10904253-10904272 None:intergenic 40.0%
GTGTGGATCTTGATCATTAC+TGG - chr1.4:10906828-10906847 MS.gene021500:intron 40.0%
TAGAGGAGAGAAAACCAACT+GGG - chr1.4:10905170-10905189 MS.gene021500:intron 40.0%
TATAGTTCCTTCCATAGAGC+TGG + chr1.4:10906475-10906494 None:intergenic 40.0%
TGGCAATAGGTACAATATGC+AGG - chr1.4:10906790-10906809 MS.gene021500:intron 40.0%
TGTACCTATTGCCATGAGTA+GGG + chr1.4:10906784-10906803 None:intergenic 40.0%
TTATCATCATCACCCTTAGG+AGG - chr1.4:10906548-10906567 MS.gene021500:CDS 40.0%
TTGTACCTATTGCCATGAGT+AGG + chr1.4:10906785-10906804 None:intergenic 40.0%
TTTATAGGGAAGGCCAAGAT+GGG - chr1.4:10904964-10904983 MS.gene021500:intron 40.0%
! CCATTCTTTTGTACCCATCT+TGG + chr1.4:10904980-10904999 None:intergenic 40.0%
! CTATTAGTTCTCACACCTGT+TGG + chr1.4:10905033-10905052 None:intergenic 40.0%
! GGGCTTAATTTGAATCTTGG+AGG - chr1.4:10906590-10906609 MS.gene021500:CDS 40.0%
! GTACAATATGCAGGGTACTA+TGG - chr1.4:10906799-10906818 MS.gene021500:intron 40.0%
!! AATAACTTAGGGTTTGGTGG+TGG - chr1.4:10906737-10906756 MS.gene021500:intron 40.0%
!! GTATGAGTAGTTGATGGCAT+TGG + chr1.4:10906644-10906663 None:intergenic 40.0%
!!! ACTGGAGAAGTTTTAAGAGC+TGG - chr1.4:10906500-10906519 MS.gene021500:CDS 40.0%
AAATCGAAATCCGGGAGGTA+GGG + chr1.4:10904245-10904264 None:intergenic 45.0%
AATCTCCTTGTCTTTCCCTG+TGG + chr1.4:10905082-10905101 None:intergenic 45.0%
ATAGACCTCACACAAAGTGG+TGG + chr1.4:10905459-10905478 None:intergenic 45.0%
ATCTCAACAAATGCGAGCCA+TGG - chr1.4:10904356-10904375 MS.gene021500:CDS 45.0%
CAAACCCTACTCATGGCAAT+AGG - chr1.4:10906777-10906796 MS.gene021500:intron 45.0%
CTAGAGGAGAGAAAACCAAC+TGG - chr1.4:10905169-10905188 MS.gene021500:intron 45.0%
CTCATTTCCAGCTCTATGGA+AGG - chr1.4:10906465-10906484 MS.gene021500:CDS 45.0%
GAAAACCACAGGGAAAGACA+AGG - chr1.4:10905074-10905093 MS.gene021500:intron 45.0%
GCTACTCATTTCCAGCTCTA+TGG - chr1.4:10906461-10906480 MS.gene021500:CDS 45.0%
GGAGAAGGATTCACCATTTC+AGG - chr1.4:10906569-10906588 MS.gene021500:CDS 45.0%
GTGAATCCTTCTCCTCCTAA+GGG + chr1.4:10906563-10906582 None:intergenic 45.0%
GTGATGAGTTCTTCATCGGT+AGG + chr1.4:10904271-10904290 None:intergenic 45.0%
TAGACCTCACACAAAGTGGT+GGG + chr1.4:10905458-10905477 None:intergenic 45.0%
TCTCAACAAATGCGAGCCAT+GGG - chr1.4:10904357-10904376 MS.gene021500:CDS 45.0%
TTCAGCTCCAACATGATGAC+AGG - chr1.4:10906677-10906696 MS.gene021500:intron 45.0%
! ATTTTACCTGGAAGCTCCCA+TGG + chr1.4:10904376-10904395 None:intergenic 45.0%
!!! CAGTTGGTTTTCTCTCCTCT+AGG + chr1.4:10905171-10905190 None:intergenic 45.0%
!! TTAATTATGTAAAATTTATA+GGG - chr1.4:10904950-10904969 MS.gene021500:intron 5.0%
!! TTTAATTATGTAAAATTTAT+AGG - chr1.4:10904949-10904968 MS.gene021500:intron 5.0%
!!! GAATTTTTTAATATTTTTTT+AGG + chr1.4:10905852-10905871 None:intergenic 5.0%
AAAGAGGAAACCCTACCTCC+CGG - chr1.4:10904232-10904251 MS.gene021500:CDS 50.0%
ATGTCCCACCACTTTGTGTG+AGG - chr1.4:10905451-10905470 MS.gene021500:intron 50.0%
GAAATCGAAATCCGGGAGGT+AGG + chr1.4:10904246-10904265 None:intergenic 50.0%
GGAAGGAACACGTGAGAAAG+AGG - chr1.4:10904216-10904235 MS.gene021500:CDS 50.0%
GGATGAAATCGAAATCCGGG+AGG + chr1.4:10904250-10904269 None:intergenic 50.0%
GGGTACTATGGACCATTGTG+TGG - chr1.4:10906811-10906830 MS.gene021500:intron 50.0%
GGTGAATCCTTCTCCTCCTA+AGG + chr1.4:10906564-10906583 None:intergenic 50.0%
TACAAAGGTCGTGCTCCTAG+AGG - chr1.4:10905153-10905172 MS.gene021500:intron 50.0%
TATGCAGCAGGATGAATGGG+TGG - chr1.4:10906268-10906287 MS.gene021500:intron 50.0%
TCATCACCCTTAGGAGGAGA+AGG - chr1.4:10906554-10906573 MS.gene021500:CDS 50.0%
TCTTTGCACCTGCACTCTTG+CGG + chr1.4:10906307-10906326 None:intergenic 50.0%
! AGAGTATTCCGCAAGAGTGC+AGG - chr1.4:10906296-10906315 MS.gene021500:intron 50.0%
! TGCTGCATCATTGTTGGTGG+TGG + chr1.4:10906425-10906444 None:intergenic 50.0%
TGCGAGCCATGGGAGCTTCC+AGG - chr1.4:10904367-10904386 MS.gene021500:CDS 65.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 10903983 10906865 10903983 ID=MS.gene021500
chr1.4 mRNA 10903983 10906865 10903983 ID=MS.gene021500.t1;Parent=MS.gene021500
chr1.4 exon 10906860 10906865 10906860 ID=MS.gene021500.t1.exon1;Parent=MS.gene021500.t1
chr1.4 CDS 10906860 10906865 10906860 ID=cds.MS.gene021500.t1;Parent=MS.gene021500.t1
chr1.4 exon 10906460 10906676 10906460 ID=MS.gene021500.t1.exon2;Parent=MS.gene021500.t1
chr1.4 CDS 10906460 10906676 10906460 ID=cds.MS.gene021500.t1;Parent=MS.gene021500.t1
chr1.4 exon 10905606 10905877 10905606 ID=MS.gene021500.t1.exon3;Parent=MS.gene021500.t1
chr1.4 CDS 10905606 10905877 10905606 ID=cds.MS.gene021500.t1;Parent=MS.gene021500.t1
chr1.4 exon 10903983 10904573 10903983 ID=MS.gene021500.t1.exon4;Parent=MS.gene021500.t1
chr1.4 CDS 10903983 10904573 10903983 ID=cds.MS.gene021500.t1;Parent=MS.gene021500.t1
Gene Sequence

>MS.gene021500

ATGCAAGTAAGCAAAGTCATCATCAATCAAACAAACTTTTGTACATAGCTTTTATTGTTTGAAAAATTTATAAAACCCTATATTTAATTTTCTTAACCCTTTATACATGCTTTTAAATTTGAACAATTTTGAAGCTAGCTCATAAGACAACTATTTGTACATCATGACACTTTTTGTGTGTTATTCCAGAAGGACAAAGAAGTTGTTAGCAAAGAAAGGAAGGATTTGGAAATGGAAGGAACACGTGAGAAAGAGGAAACCCTACCTCCCGGATTTCGATTTCATCCTACCGATGAAGAACTCATCACTTACTATCTTGTAAGCAAGATTTCAGATTCTGTAAATTTTACATGCAAAGCAATAGGTGATGTAGATCTCAACAAATGCGAGCCATGGGAGCTTCCAGGTAAAATTTTATGTATGAATCTTTTGTTTAATTGAAGATTCACTTGACTCTATTTGATTTTTCCCTTTTTTTCATTTATCAAGAACAAGAATAGATCCATATATATCGATACTAAATATTTGTTTTGTAATTCATCTACTTAATTTACTTTTCCTTTCATCCATGCTTTATAAAAACAAAAAACTAGGGTTTCTTCAAGATTCTACTATTAGCTACAACAAATTCAGCAGCTAACTCATAAACACAACAATTTCTTCATACTAGAAAAATTAAAATTAGTTATGGAAAAAATGATTGTATCATAACTAATCTTTTTGTTTTTCCACAATATATGACTTTCATCTTTCTTGTGATATGGTTAAGGTTTACTATAGTATATACAAAATTTTATTTTATTTCATAAATCCTCATTTTGTAAAAGAAAATTAATATGTCTGGCAAATTAAATATGATAATTTAATTTTATTTAATTATATAGTGTGGTTTTCTCTAGTAAATTGAGTTTATTAATTTTTTTTCTTCTAATTATTTTGAGTTTATTAATTTTTTTCTTCTAATTATTTAATTATGTAAAATTTATAGGGAAGGCCAAGATGGGTACAAAAGAATGGTATTTCTTCAGTCTAAGAGATCGTAAATATCCAACAGGTGTGAGAACTAATAGAGCAACAAACACTGGATATTGGAAAACCACAGGGAAAGACAAGGAGATTTTCAACAGTGTTACATCAGAATTGGTTGGTATGAAGAAAACTTTGGTTTTTTACAAAGGTCGTGCTCCTAGAGGAGAGAAAACCAACTGGGTCATGCATGAATATCGTATCCATTCCAAATCCAGTATAAGAACCAACAAGGTATATTATATAATTTATATCTACATAATCATAATAAGTTAATTCATAAGCACAAAATGAAGTAATGAAAAAAATTATGATAATAGGGCGTAAACCCTATTATACATCTTTAAATGTTACAAACCATGTTGTATTGAAGAATGCTAGCAACACTCACTTTTGAACATTCTCTCTAGCATTCACTCTTCTATTTGGATGAAATCAATGTATGTCCCACCACTTTGTGTGAGGTCTATTTAAATAACATGCTCCATCTTATAATAGTCTGAATAAGAATAAAAGAACCCTATATACAAAATTTCTTCAACTTTTAATTCCTATAATATTTTTAGTCACCAATTTGAATCCCTACTATAAAATTGAAGTAAATTGAGACACTATTAAAATGCTACCAAACTTTGCAAATATACTCTATGTAGTAATTTTTTTTGACAAAATACTCTATGTTGTAATTAGAAGTCTCTGCAAAAAAAAAAAAAGATTTGATTTTTAGGTCTAAGTTTGGGTTATTTTAGTTTCTAAAACTTTTGGTATTTTAAAAAAAAAATCATATTTAATTCATTTCTTAAACTTGTGGGTAAGATGTTTATAATGTTCTTTAACATACCTAAAAAAATATTAAAAAATTCAAAGTAAACACATGAGTTAACTTAGCTATAACGAATAAAAGTTGAAGAATTTTTTTTAGGTAAAAACAAAAATTTAAACTTTTTATGGGGACTAATACTATATTTAAGAATAAGGGGTATTGTAACTAAGATACAAGTTTAAGTCACAACCGTCATAGTATTGGAAAAAAATCTTATGATCGCAACCAATCCAAAAAGCATACAAATTTTAGAAATTTATATTCATAAATCATACTATATAATCATGCATTTAGTTTTGATGCATTGTTATTGGTATTAAAAAATAATAGACTGTTAATCAATCACAAAATCAGTTATAAGTTTATCATATCCAGAAACACACACACATACATGAATATAATCAACTAGTTACAATAATGATTAATGTCGAATATATATGCAGCAGGATGAATGGGTGGTAAGCAGAGTATTCCGCAAGAGTGCAGGTGCAAAGAAGTACCCTTCTTCTTCTTCAAATCTTACAAGAGCAGTCATGAATCCTTACCATATCAATCTAGAAGTTGGTCCTCCTAGCTTTAATAATAATATGCCACCACCAACAATGATGCAGCATTTAGGGCTAGATTCTGCTACTCATTTCCAGCTCTATGGAAGGAACTATATCAACACTGGAGAAGTTTTAAGAGCTGGTGTACCAATGCATCAATATTCCCATTTATCATCATCACCCTTAGGAGGAGAAGGATTCACCATTTCAGGGCTTAATTTGAATCTTGGAGGATCCACGTCTTCACAAACTATTTTGAGGCCAATGCCATCAACTACTCATACTATGGCTGCTGATTTCAGCTCCAACATGATGACAGGTGCAAATAGTAATACCCTTGTTGCTGCAGAGAATAATAATAACTTAGGGTTTGGTGGTGGAGATCAAGTGAATAATGCAAACCCTACTCATGGCAATAGGTACAATATGCAGGGTACTATGGACCATTGTGTGGATCTTGATCATTACTGGCCACCTTCTTACTGA
Protein sequence

>MS.gene021500.t1

MQKDKEVVSKERKDLEMEGTREKEETLPPGFRFHPTDEELITYYLVSKISDSVNFTCKAIGDVDLNKCEPWELPGKAKMGTKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSVTSELVGMKKTLVFYKGRAPRGEKTNWVMHEYRIHSKSSIRTNKQDEWVVSRVFRKSAGAKKYPSSSSNLTRAVMNPYHINLEVGPPSFNNNMPPPTMMQHLGLDSATHFQLYGRNYINTGEVLRAGVPMHQYSHLSSSPLGGEGFTISGLNLNLGGSTSSQTILRPMPSTTHTMAADFSSNMMTGANSNTLVAAENNNNLGFGGGDQVNNANPTHGNRYNMQGTMDHCVDLDHYWPPSY