AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene021504

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene021504.t1 MTR_1g008740 96.961 362 9 2 1 360 1 362 0.0 728
MS.gene021504.t1 MTR_1g008740 96.839 348 9 2 15 360 1 348 0.0 699
MS.gene021504.t1 MTR_3g109340 60.695 374 110 15 8 360 1 358 1.88e-125 365
MS.gene021504.t1 MTR_3g109340 60.428 374 110 16 8 360 1 357 8.31e-123 358
MS.gene021504.t1 MTR_6g084430 75.625 160 35 3 24 183 2 157 9.66e-82 252
MS.gene021504.t1 MTR_2g078700 72.903 155 38 2 27 178 23 176 5.36e-80 249
MS.gene021504.t1 MTR_4g108760 65.882 170 52 3 17 183 7 173 1.10e-76 240
MS.gene021504.t1 MTR_3g435150 65.476 168 51 4 20 183 8 172 1.14e-74 233
MS.gene021504.t1 MTR_6g032770 57.868 197 72 4 27 213 18 213 9.39e-73 231
MS.gene021504.t1 MTR_7g085260 64.327 171 55 3 27 192 17 186 3.28e-72 229
MS.gene021504.t1 MTR_6g012670 56.585 205 74 6 6 207 3 195 5.36e-72 227
MS.gene021504.t1 MTR_3g116070 69.343 137 42 0 21 157 17 153 8.79e-69 220
MS.gene021504.t1 MTR_3g070030 63.975 161 51 3 27 183 19 176 1.71e-67 216
MS.gene021504.t1 MTR_7g011130 59.412 170 50 3 30 183 22 188 1.40e-63 206
MS.gene021504.t1 MTR_7g011120 53.846 195 71 5 27 207 8 197 3.01e-60 196
MS.gene021504.t1 MTR_2g064470 57.485 167 62 4 24 187 8 168 3.15e-60 196
MS.gene021504.t1 MTR_1g069805 52.830 159 71 2 19 177 2 156 2.93e-58 190
MS.gene021504.t1 MTR_7g097090 52.866 157 70 2 19 175 2 154 1.42e-56 186
MS.gene021504.t1 MTR_2g062730 53.659 164 70 4 24 184 7 167 1.55e-56 188
MS.gene021504.t1 MTR_4g035590 59.740 154 54 4 27 177 8 156 1.56e-56 188
MS.gene021504.t1 MTR_4g036030 56.494 154 60 4 27 177 7 156 2.99e-55 184
MS.gene021504.t1 MTR_7g100990 52.410 166 73 2 17 177 1 165 3.14e-55 184
MS.gene021504.t1 MTR_2g080010 50.575 174 67 3 20 178 8 177 3.38e-55 184
MS.gene021504.t1 MTR_3g088110 52.273 176 70 4 24 192 4 172 3.69e-55 182
MS.gene021504.t1 MTR_4g101680 56.494 154 60 4 27 177 7 156 9.09e-55 184
MS.gene021504.t1 MTR_7g085220 51.765 170 63 4 27 181 8 173 1.57e-54 182
MS.gene021504.t1 MTR_5g012080 54.545 154 65 3 27 177 7 158 1.58e-54 183
MS.gene021504.t1 MTR_5g041940 54.430 158 60 4 27 177 3 155 2.02e-54 180
MS.gene021504.t1 MTR_8g059170 52.174 161 71 3 26 183 13 170 6.80e-54 181
MS.gene021504.t1 MTR_2g079990 54.037 161 66 4 26 183 15 170 7.16e-54 181
MS.gene021504.t1 MTR_6g477900 55.769 156 63 4 27 179 6 158 1.04e-53 177
MS.gene021504.t1 MTR_2g064090 57.595 158 58 6 26 178 5 158 1.10e-53 181
MS.gene021504.t1 MTR_2157s0010 52.761 163 65 3 27 178 8 169 2.14e-53 177
MS.gene021504.t1 MTR_5g021710 52.229 157 68 4 24 177 5 157 2.46e-53 180
MS.gene021504.t1 MTR_8g024480 48.901 182 77 4 24 192 12 190 3.87e-53 181
MS.gene021504.t1 MTR_4g089135 46.939 196 66 5 27 195 15 199 4.23e-53 179
MS.gene021504.t1 MTR_3g064580 56.051 157 62 4 26 178 5 158 1.08e-52 185
MS.gene021504.t1 MTR_3g070040 57.862 159 55 6 31 183 12 164 1.10e-52 177
MS.gene021504.t1 MTR_4g081870 50.867 173 71 5 17 182 1 166 1.60e-52 175
MS.gene021504.t1 MTR_5g076850 56.410 156 62 4 26 178 5 157 2.53e-52 184
MS.gene021504.t1 MTR_2g093810 43.496 246 105 9 26 257 13 238 4.92e-52 176
MS.gene021504.t1 MTR_1g096430 51.534 163 72 4 24 183 4 162 5.19e-52 176
MS.gene021504.t1 MTR_8g094580 50.289 173 73 5 17 184 1 165 1.02e-51 174
MS.gene021504.t1 MTR_8g076110 48.765 162 76 4 24 182 3 160 1.09e-51 174
MS.gene021504.t1 MTR_7g005280 52.761 163 65 5 24 182 12 166 3.87e-51 171
MS.gene021504.t1 MTR_0036s0150 52.866 157 70 2 29 183 7 161 4.93e-50 176
MS.gene021504.t1 MTR_2g079990 44.920 187 71 3 26 183 15 198 3.59e-49 170
MS.gene021504.t1 MTR_3g096920 48.045 179 83 5 24 198 4 176 8.40e-49 166
MS.gene021504.t1 MTR_1g090723 50.318 157 74 2 29 183 10 164 1.36e-48 172
MS.gene021504.t1 MTR_1g090723 50.318 157 74 2 29 183 10 164 1.78e-48 173
MS.gene021504.t1 MTR_8g467490 45.665 173 83 3 16 178 3 174 5.75e-47 164
MS.gene021504.t1 MTR_1g090723 50.000 158 74 3 29 183 10 165 9.06e-47 168
MS.gene021504.t1 MTR_5g014300 49.693 163 72 5 26 181 5 164 1.49e-46 161
MS.gene021504.t1 MTR_5g040420 45.122 164 80 2 24 178 11 173 5.60e-45 159
MS.gene021504.t1 MTR_3g093050 53.548 155 66 4 26 177 21 172 2.66e-44 161
MS.gene021504.t1 MTR_4g098630 45.856 181 78 6 17 188 1 170 3.75e-44 155
MS.gene021504.t1 MTR_3g093050 53.548 155 66 4 26 177 21 172 3.81e-44 161
MS.gene021504.t1 MTR_6g011860 36.475 244 121 6 10 243 2 221 4.77e-44 156
MS.gene021504.t1 MTR_3g096920 55.303 132 55 2 24 155 4 131 9.40e-44 154
MS.gene021504.t1 MTR_5g069030 52.597 154 67 4 27 177 25 175 2.13e-43 159
MS.gene021504.t1 MTR_4g134460 45.732 164 85 4 23 186 50 209 1.15e-42 154
MS.gene021504.t1 MTR_3g096140 49.342 152 71 4 29 177 9 157 1.56e-42 149
MS.gene021504.t1 MTR_1g090720 50.311 161 68 4 26 177 41 198 2.31e-42 154
MS.gene021504.t1 MTR_3g093040 50.323 155 71 4 26 177 107 258 5.77e-42 149
MS.gene021504.t1 MTR_3g096140 48.701 154 73 4 29 179 9 159 7.31e-42 150
MS.gene021504.t1 MTR_5g090970 40.571 175 92 3 21 184 12 185 9.44e-42 148
MS.gene021504.t1 MTR_1g097300 50.000 160 70 6 29 183 21 175 6.08e-41 151
MS.gene021504.t1 MTR_2g086880 48.993 149 66 4 29 176 20 159 3.12e-40 149
MS.gene021504.t1 MTR_5g090970 40.571 175 91 4 21 184 12 184 3.24e-40 144
MS.gene021504.t1 MTR_2g086880 48.993 149 66 4 29 176 20 159 3.42e-40 149
MS.gene021504.t1 MTR_4g075980 43.750 160 84 3 24 182 12 166 7.67e-40 143
MS.gene021504.t1 MTR_2g068880 39.683 189 97 5 11 183 5 192 1.03e-38 140
MS.gene021504.t1 MTR_8g063550 45.455 154 78 4 27 177 6 156 1.14e-38 141
MS.gene021504.t1 MTR_8g063550 45.455 154 78 4 27 177 6 156 3.02e-38 142
MS.gene021504.t1 MTR_8g063550 45.455 154 78 4 27 177 6 156 3.13e-38 142
MS.gene021504.t1 MTR_2g068920 38.830 188 99 4 11 183 5 191 3.44e-38 138
MS.gene021504.t1 MTR_8g099750 36.652 221 116 6 27 230 14 227 1.25e-37 135
MS.gene021504.t1 MTR_3g098810 39.070 215 107 8 27 230 14 215 1.12e-36 133
MS.gene021504.t1 MTR_8g093580 43.506 154 81 4 27 177 6 156 3.03e-36 137
MS.gene021504.t1 MTR_4g052620 39.053 169 94 4 24 184 2 169 2.34e-34 127
MS.gene021504.t1 MTR_8g023840 44.667 150 76 3 27 174 11 155 8.25e-34 129
MS.gene021504.t1 MTR_3g096140 45.714 140 70 4 43 179 2 138 2.37e-32 124
MS.gene021504.t1 MTR_8g023900 41.667 156 86 3 25 178 10 162 4.69e-32 125
MS.gene021504.t1 MTR_8g023900 38.095 189 99 6 1 177 158 340 1.25e-30 121
MS.gene021504.t1 MTR_8g094580 52.212 113 46 3 77 184 2 111 6.84e-32 120
MS.gene021504.t1 MTR_3g098810 43.972 141 74 3 27 165 14 151 1.08e-31 117
MS.gene021504.t1 MTR_2g086690 42.857 140 68 4 28 159 5 140 1.35e-31 120
MS.gene021504.t1 MTR_8g023930 40.909 154 84 3 27 178 24 172 2.94e-31 123
MS.gene021504.t1 MTR_8g023860 45.736 129 67 2 27 153 12 139 3.96e-31 122
MS.gene021504.t1 MTR_4g094302 39.752 161 77 4 27 178 11 160 6.37e-31 116
MS.gene021504.t1 MTR_7g105170 35.484 186 105 6 25 196 2 186 1.86e-30 117
MS.gene021504.t1 MTR_4g094302 43.511 131 61 3 27 155 11 130 2.28e-30 114
MS.gene021504.t1 MTR_8g023880 40.698 172 77 6 22 177 2 164 1.32e-29 115
MS.gene021504.t1 MTR_7g070140 55.696 79 35 0 82 160 18 96 1.19e-25 100
MS.gene021504.t1 MTR_8g093790 40.397 151 68 5 27 177 10 138 1.52e-22 94.0
MS.gene021504.t1 MTR_3g096400 37.423 163 80 6 27 176 7 160 2.07e-21 91.3
MS.gene021504.t1 MTR_7g083360 35.821 134 79 5 24 155 7 135 2.44e-18 81.3
MS.gene021504.t1 MTR_7g083330 34.351 131 79 5 27 155 18 143 3.23e-17 79.3
MS.gene021504.t1 MTR_7g070150 46.053 76 39 1 120 195 2 75 5.65e-15 70.1
MS.gene021504.t1 MTR_7g083370 32.090 134 84 4 24 155 7 135 1.00e-14 70.9
MS.gene021504.t1 MTR_4g088245 29.469 207 124 8 27 218 68 267 1.74e-14 73.9
MS.gene021504.t1 MTR_2g090735 34.118 170 85 8 27 178 49 209 1.30e-13 70.9
MS.gene021504.t1 MTR_7g116460 30.726 179 111 7 33 204 11 183 4.45e-13 67.8
MS.gene021504.t1 MTR_1g093680 28.426 197 112 8 27 201 58 247 6.56e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene021504.t1 AT2G24430 51.549 355 104 9 21 357 10 314 3.49e-106 314
MS.gene021504.t1 AT2G24430 51.549 355 104 9 21 357 10 314 3.49e-106 314
MS.gene021504.t1 AT3G18400 73.750 160 39 2 24 183 2 158 1.74e-82 254
MS.gene021504.t1 AT5G53950 71.250 160 42 2 25 181 15 173 1.33e-79 248
MS.gene021504.t1 AT5G61430 67.647 170 49 3 22 188 11 177 6.22e-77 240
MS.gene021504.t1 AT3G15170 70.000 160 44 2 22 178 15 173 2.95e-76 238
MS.gene021504.t1 AT5G07680 68.485 165 46 3 27 188 3 164 3.62e-76 238
MS.gene021504.t1 AT5G07680 64.641 181 54 4 15 188 1 178 4.01e-76 238
MS.gene021504.t1 AT1G76420 64.072 167 59 1 16 182 11 176 2.33e-73 231
MS.gene021504.t1 AT5G39610 60.938 192 62 5 22 209 15 197 1.21e-72 228
MS.gene021504.t1 AT5G18270 69.481 154 42 3 27 177 21 172 1.83e-70 224
MS.gene021504.t1 AT5G18270 68.831 154 43 3 27 177 21 172 7.92e-70 222
MS.gene021504.t1 AT3G29035 61.202 183 64 4 8 186 5 184 5.55e-69 219
MS.gene021504.t1 AT3G04060 61.236 178 64 3 18 192 11 186 5.99e-69 220
MS.gene021504.t1 AT4G27410 53.216 171 70 5 19 183 2 168 8.79e-59 192
MS.gene021504.t1 AT3G12977 49.038 208 79 8 24 213 15 213 1.19e-57 189
MS.gene021504.t1 AT4G10350 59.355 155 56 4 27 177 9 160 2.69e-57 190
MS.gene021504.t1 AT1G56010 39.502 281 146 8 24 290 16 286 2.78e-57 189
MS.gene021504.t1 AT1G33280 59.740 154 54 4 27 177 8 156 1.04e-56 187
MS.gene021504.t1 AT4G28530 42.925 212 102 3 19 215 2 209 1.32e-55 186
MS.gene021504.t1 AT4G27410 48.936 188 69 6 19 183 2 185 2.43e-55 184
MS.gene021504.t1 AT1G12260 54.430 158 65 4 27 181 7 160 4.01e-55 184
MS.gene021504.t1 AT1G69490 54.268 164 67 4 24 182 6 166 4.97e-55 182
MS.gene021504.t1 AT1G12260 54.430 158 65 4 27 181 7 160 5.79e-55 185
MS.gene021504.t1 AT3G04070 49.727 183 80 4 20 191 3 184 1.46e-54 182
MS.gene021504.t1 AT1G62700 55.063 158 64 4 27 181 7 160 2.57e-54 184
MS.gene021504.t1 AT1G62700 55.063 158 64 4 27 181 7 160 2.57e-54 184
MS.gene021504.t1 AT1G65910 55.280 161 66 4 26 183 5 162 2.79e-54 189
MS.gene021504.t1 AT2G18060 34.568 324 182 9 26 330 8 320 2.92e-54 182
MS.gene021504.t1 AT2G18060 34.568 324 182 9 26 330 8 320 2.92e-54 182
MS.gene021504.t1 AT3G10500 56.522 161 64 4 26 183 8 165 3.40e-54 187
MS.gene021504.t1 AT5G62380 53.416 161 68 4 27 184 7 163 9.74e-54 181
MS.gene021504.t1 AT5G62380 53.416 161 68 4 27 184 7 163 9.74e-54 181
MS.gene021504.t1 AT1G61110 51.479 169 67 4 27 182 16 182 9.91e-54 180
MS.gene021504.t1 AT1G52890 53.459 159 70 3 26 183 13 168 1.07e-53 180
MS.gene021504.t1 AT4G36160 53.548 155 65 4 26 177 9 159 1.21e-53 181
MS.gene021504.t1 AT4G36160 53.548 155 65 4 26 177 9 159 1.21e-53 181
MS.gene021504.t1 AT4G36160 53.548 155 65 4 26 177 13 163 1.42e-53 181
MS.gene021504.t1 AT1G01720 53.086 162 67 4 27 183 7 164 1.71e-53 178
MS.gene021504.t1 AT1G71930 51.592 157 69 4 24 177 6 158 2.10e-53 179
MS.gene021504.t1 AT1G71930 51.592 157 69 4 24 177 6 158 2.10e-53 179
MS.gene021504.t1 AT3G17730 52.695 167 73 4 27 190 6 169 2.18e-53 177
MS.gene021504.t1 AT3G15500 53.459 159 70 3 26 183 13 168 3.38e-53 178
MS.gene021504.t1 AT3G03200 57.051 156 60 4 26 177 5 157 6.57e-53 182
MS.gene021504.t1 AT3G61910 47.802 182 75 4 24 188 8 186 8.00e-53 178
MS.gene021504.t1 AT2G46770 50.877 171 64 5 24 177 13 180 8.35e-53 179
MS.gene021504.t1 AT5G04410 55.280 161 66 4 26 183 8 165 2.18e-52 182
MS.gene021504.t1 AT3G04070 45.729 199 80 4 20 191 3 200 3.57e-52 177
MS.gene021504.t1 AT1G79580 55.484 155 62 4 26 177 16 166 6.95e-52 176
MS.gene021504.t1 AT1G79580 55.484 155 62 4 26 177 16 166 6.95e-52 176
MS.gene021504.t1 AT1G79580 55.484 155 62 4 26 177 16 166 6.95e-52 176
MS.gene021504.t1 AT1G79580 55.484 155 62 4 26 177 16 166 6.95e-52 176
MS.gene021504.t1 AT1G79580 55.484 155 62 4 26 177 16 166 6.95e-52 176
MS.gene021504.t1 AT5G17260 56.410 156 61 4 26 177 5 157 8.56e-52 179
MS.gene021504.t1 AT5G66300 51.613 155 69 3 26 177 11 162 8.67e-52 174
MS.gene021504.t1 AT5G08790 52.096 167 70 4 24 184 4 166 1.07e-51 173
MS.gene021504.t1 AT5G63790 52.976 168 67 5 24 184 47 209 4.50e-51 172
MS.gene021504.t1 AT5G63790 52.976 168 67 5 24 184 57 219 5.49e-51 173
MS.gene021504.t1 AT3G10490 53.049 164 68 5 19 177 19 178 1.70e-49 166
MS.gene021504.t1 AT3G10480 56.329 158 58 6 26 177 26 178 3.64e-49 171
MS.gene021504.t1 AT1G77450 51.220 164 66 4 27 183 10 166 4.95e-49 166
MS.gene021504.t1 AT1G32770 45.226 199 89 8 27 211 16 208 7.92e-49 168
MS.gene021504.t1 AT3G15510 47.305 167 69 3 31 182 21 183 1.27e-48 168
MS.gene021504.t1 AT3G10480 55.128 156 62 5 26 177 26 177 1.57e-48 169
MS.gene021504.t1 AT5G61430 67.826 115 32 2 77 188 2 114 2.36e-48 164
MS.gene021504.t1 AT5G46590 43.939 198 98 6 26 214 5 198 3.66e-48 164
MS.gene021504.t1 AT3G10490 53.049 164 68 5 19 177 19 178 4.54e-48 169
MS.gene021504.t1 AT4G17980 51.572 159 67 4 26 177 5 160 5.67e-48 163
MS.gene021504.t1 AT5G46590 56.818 132 53 3 26 155 5 134 7.47e-48 163
MS.gene021504.t1 AT4G17980 51.572 159 67 4 26 177 5 160 1.57e-47 163
MS.gene021504.t1 AT1G54330 52.795 161 67 5 26 183 5 159 1.59e-47 163
MS.gene021504.t1 AT5G13180 50.318 157 73 3 27 182 14 166 2.05e-47 161
MS.gene021504.t1 AT1G33060 52.500 160 70 4 25 181 22 178 2.33e-47 170
MS.gene021504.t1 AT1G33060 52.500 160 70 4 25 181 22 178 2.48e-47 170
MS.gene021504.t1 AT4G35580 53.846 156 66 4 25 177 7 159 1.06e-46 166
MS.gene021504.t1 AT4G35580 53.846 156 66 4 25 177 7 159 1.15e-46 166
MS.gene021504.t1 AT4G35580 53.846 156 66 4 25 177 7 159 1.27e-46 166
MS.gene021504.t1 AT1G52880 50.932 161 61 4 31 177 21 177 2.41e-45 158
MS.gene021504.t1 AT1G26870 43.429 175 88 2 14 178 3 176 2.66e-45 160
MS.gene021504.t1 AT1G34180 50.000 158 73 4 29 183 18 172 8.64e-45 160
MS.gene021504.t1 AT5G39820 41.489 188 85 4 14 178 7 192 1.14e-44 157
MS.gene021504.t1 AT1G34190 50.000 158 73 4 29 183 18 172 5.04e-44 160
MS.gene021504.t1 AT1G34180 50.000 158 73 4 29 183 18 172 5.30e-44 160
MS.gene021504.t1 AT2G02450 48.734 158 77 4 29 186 53 206 6.07e-44 156
MS.gene021504.t1 AT2G02450 48.734 158 77 4 29 186 53 206 6.63e-44 157
MS.gene021504.t1 AT2G33480 50.658 152 68 4 27 177 15 160 2.05e-43 151
MS.gene021504.t1 AT3G10480 47.120 191 57 7 26 177 26 211 2.65e-43 157
MS.gene021504.t1 AT3G49530 50.000 156 73 4 25 177 11 164 4.97e-43 154
MS.gene021504.t1 AT1G34180 46.471 170 73 4 29 183 18 184 6.67e-43 155
MS.gene021504.t1 AT2G43000 44.304 158 83 3 22 177 13 167 8.25e-43 150
MS.gene021504.t1 AT2G33480 50.000 156 61 5 27 177 15 158 1.17e-42 149
MS.gene021504.t1 AT3G49530 50.314 159 68 5 25 177 11 164 1.17e-42 154
MS.gene021504.t1 AT5G64060 46.154 156 78 4 27 179 6 158 2.16e-42 151
MS.gene021504.t1 AT5G24590 45.109 184 91 5 26 201 12 193 2.70e-42 153
MS.gene021504.t1 AT5G09330 49.359 156 73 4 27 179 6 158 2.85e-42 154
MS.gene021504.t1 AT5G09330 49.359 156 73 4 27 179 6 158 2.85e-42 154
MS.gene021504.t1 AT5G09330 49.359 156 73 4 27 179 6 158 2.85e-42 154
MS.gene021504.t1 AT5G09330 49.359 156 73 4 27 179 6 158 2.85e-42 154
MS.gene021504.t1 AT5G09330 49.359 156 73 4 27 179 6 158 2.85e-42 154
MS.gene021504.t1 AT1G34180 46.471 170 73 4 29 183 18 184 3.52e-42 155
MS.gene021504.t1 AT1G32870 48.370 184 78 7 7 183 29 202 1.20e-41 153
MS.gene021504.t1 AT2G27300 49.032 155 68 5 26 179 13 157 2.45e-41 148
MS.gene021504.t1 AT1G32870 51.235 162 69 5 27 183 10 166 3.34e-41 151
MS.gene021504.t1 AT1G32870 51.235 162 69 5 27 183 10 166 3.58e-41 151
MS.gene021504.t1 AT2G17040 43.871 155 81 3 29 182 8 157 5.97e-41 145
MS.gene021504.t1 AT1G32510 45.783 166 80 4 27 183 6 170 8.43e-41 145
MS.gene021504.t1 AT5G22290 46.053 152 73 4 26 176 20 163 8.95e-39 141
MS.gene021504.t1 AT1G56010 37.719 228 118 8 77 290 2 219 1.60e-37 135
MS.gene021504.t1 AT4G28530 47.794 136 56 1 19 139 2 137 1.56e-36 134
MS.gene021504.t1 AT3G12977 48.387 155 54 7 77 213 14 160 4.46e-36 131
MS.gene021504.t1 AT3G12910 38.378 185 95 6 18 184 9 192 4.97e-36 133
MS.gene021504.t1 AT3G44290 48.413 126 61 3 29 153 16 138 1.29e-35 130
MS.gene021504.t1 AT4G10350 57.798 109 40 3 73 177 7 113 2.00e-35 131
MS.gene021504.t1 AT3G44290 48.413 126 61 3 29 153 16 138 9.56e-35 130
MS.gene021504.t1 AT5G04395 44.371 151 69 3 19 155 20 169 9.24e-34 124
MS.gene021504.t1 AT3G44350 35.542 166 100 3 25 184 3 167 3.30e-27 108
MS.gene021504.t1 AT5G64530 35.714 182 85 6 27 191 3 169 6.63e-27 105
MS.gene021504.t1 AT5G64530 42.748 131 58 4 27 155 3 118 8.95e-27 104
MS.gene021504.t1 AT2G33480 54.167 96 41 2 83 177 10 103 3.40e-26 104
MS.gene021504.t1 AT3G44350 38.462 143 83 2 25 163 3 144 1.12e-25 101
MS.gene021504.t1 AT4G01520 34.239 184 112 5 28 206 5 184 1.44e-25 105
MS.gene021504.t1 AT1G02230 43.846 130 66 5 28 153 4 130 2.98e-25 105
MS.gene021504.t1 AT4G01550 38.411 151 86 3 30 177 7 153 3.00e-25 106
MS.gene021504.t1 AT5G22380 40.909 132 66 4 30 153 8 135 1.21e-24 100
MS.gene021504.t1 AT4G01540 35.928 167 98 5 30 191 7 169 1.44e-24 103
MS.gene021504.t1 AT4G01540 35.928 167 98 5 30 191 7 169 2.51e-24 103
MS.gene021504.t1 AT4G01540 35.329 167 99 5 30 191 7 169 2.82e-24 103
MS.gene021504.t1 AT3G04420 39.416 137 78 3 28 161 4 138 3.06e-24 101
MS.gene021504.t1 AT4G01540 35.329 167 99 5 30 191 7 169 3.68e-24 103
MS.gene021504.t1 AT3G04420 40.602 133 74 3 28 157 4 134 5.42e-24 101
MS.gene021504.t1 AT1G02250 38.462 130 73 4 28 153 4 130 1.42e-21 95.1
MS.gene021504.t1 AT3G10490 56.962 79 30 2 101 177 2 78 8.47e-21 92.4
MS.gene021504.t1 AT3G10490 56.962 79 30 2 101 177 2 78 8.47e-21 92.4
MS.gene021504.t1 AT1G02220 37.984 129 72 4 28 153 4 127 5.23e-20 90.9
MS.gene021504.t1 AT2G18060 32.867 143 90 3 106 245 2 141 3.22e-19 87.0
MS.gene021504.t1 AT2G43000 41.758 91 49 2 89 177 1 89 7.66e-19 84.0
MS.gene021504.t1 AT1G01010 38.346 133 71 5 30 153 6 136 1.60e-18 86.7
MS.gene021504.t1 AT3G04430 34.437 151 83 5 33 169 6 154 5.57e-17 79.0
MS.gene021504.t1 AT5G50820 32.192 146 72 6 27 162 17 145 3.96e-15 73.6
MS.gene021504.t1 AT5G14000 33.125 160 97 6 27 183 15 167 1.63e-14 72.0
MS.gene021504.t1 AT5G22290 48.571 70 29 2 107 176 2 64 4.31e-14 71.6
MS.gene021504.t1 AT5G14000 32.857 140 87 4 27 164 15 149 1.78e-13 67.8
MS.gene021504.t1 AT3G56530 31.788 151 91 4 23 167 48 192 7.71e-13 68.9
MS.gene021504.t1 AT5G56620 31.429 175 88 7 27 175 43 211 4.71e-12 67.4
MS.gene021504.t1 AT5G56620 31.429 175 88 7 27 175 43 211 4.96e-12 67.0
MS.gene021504.t1 AT5G56620 31.429 175 88 7 27 175 43 211 7.60e-12 66.6
MS.gene021504.t1 AT3G55210 27.647 170 105 5 26 182 10 174 3.33e-11 63.5

Find 97 sgRNAs with CRISPR-Local

Find 167 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAGAAGGATTCACCATTTC+AGG 0.161758 1.4:-10867360 MS.gene021504:CDS
CCAACAATGATGCAGCATTT+AGG 0.221902 1.4:-10867501 MS.gene021504:CDS
CTAAGGGTGATGATGATAAA+TGG 0.225370 1.4:+10867385 None:intergenic
GTTGGTTCTTATACTGGATT+TGG 0.259797 1.4:+10868719 None:intergenic
TACCTTGTTGGTTCTTATAC+TGG 0.266381 1.4:+10868713 None:intergenic
CAACAATGATGCAGCATTTA+GGG 0.296732 1.4:-10867500 MS.gene021504:CDS
TAGCAAAGAAAGGAAGGATT+TGG 0.310503 1.4:-10869784 MS.gene021504:CDS
GCCATCAACTACTCATACTA+TGG 0.320155 1.4:-10867283 MS.gene021504:CDS
GTGTGGATCTTGATCATTAC+TGG 0.343277 1.4:-10867101 MS.gene021504:CDS
TCAGGGCTTAATTTGAATCT+TGG 0.354521 1.4:-10867342 MS.gene021504:CDS
CAACAGTGTTACATCAGAAT+TGG 0.355460 1.4:-10868832 MS.gene021504:CDS
GAGCAACAAACACTGGATAT+TGG 0.356961 1.4:-10868884 MS.gene021504:CDS
AATAATAATAACTTAGGGTT+TGG 0.365351 1.4:-10867198 MS.gene021504:CDS
GTACAATATGCAGGGTACTA+TGG 0.388563 1.4:-10867130 MS.gene021504:CDS
GCAGAGAATAATAATAACTT+AGG 0.389630 1.4:-10867204 MS.gene021504:CDS
TGCGAGCCATGGGAGCTTCC+AGG 0.393548 1.4:-10869606 MS.gene021504:intron
GACTGCTCTTGTAAGATTTG+AGG 0.407771 1.4:+10867587 None:intergenic
ATTCAAATTAAGCCCTGAAA+TGG 0.426887 1.4:+10867347 None:intergenic
GGTTGGTATGAAGAAAACTT+TGG 0.429083 1.4:-10868811 MS.gene021504:CDS
AATAATAACTTAGGGTTTGG+TGG 0.433273 1.4:-10867195 MS.gene021504:CDS
CTTGTAAGATTTGAGGAAGA+AGG 0.437392 1.4:+10867594 None:intergenic
CATTTATCATCATCACCCTT+AGG 0.446380 1.4:-10867384 MS.gene021504:CDS
CTATTAGTTCTCACACCTGT+TGG 0.449944 1.4:+10868906 None:intergenic
AGTTGTTAGCAAAGAAAGGA+AGG 0.451453 1.4:-10869790 MS.gene021504:CDS
CAAACCCTACTCATGGCAAT+AGG 0.453517 1.4:-10867152 MS.gene021504:CDS
TACAGTATTAATCTAGAAGT+TGG 0.456693 1.4:-10867555 MS.gene021504:CDS
GGTGAATCCTTCTCCTCCTA+AGG 0.457239 1.4:+10867368 None:intergenic
TAAGGGTGATGATGATAAAT+GGG 0.459246 1.4:+10867386 None:intergenic
ACTTCTAGATTAATACTGTA+AGG 0.463803 1.4:+10867558 None:intergenic
AGAGTGTTCCGCAAGAGTGC+AGG 0.467497 1.4:-10867630 MS.gene021504:CDS
TTCTTATACTGGATTTGGAA+TGG 0.468387 1.4:+10868724 None:intergenic
GGGCTTAATTTGAATCTTGG+AGG 0.468716 1.4:-10867339 MS.gene021504:CDS
TGGCAATAGGTACAATATGC+AGG 0.471195 1.4:-10867139 MS.gene021504:CDS
AGAAAGGAAGGATTTGGAAA+TGG 0.473442 1.4:-10869778 MS.gene021504:CDS
TATATATGCAGCAGGATGAA+TGG 0.479522 1.4:-10867662 MS.gene021504:intron
AGTTATATAATATACCTTGT+TGG 0.483224 1.4:+10868701 None:intergenic
GCCATAGTATGAGTAGTTGA+TGG 0.484673 1.4:+10867282 None:intergenic
AAGAAGTTGTTAGCAAAGAA+AGG 0.487064 1.4:-10869794 MS.gene021504:CDS
CTAGAGGAGAGAAAACCAAC+TGG 0.491009 1.4:-10868767 MS.gene021504:CDS
GGTAGGATGAAATCGAAATC+CGG 0.491316 1.4:+10869722 None:intergenic
AGAGATCGTAAATATCCAAC+AGG 0.491428 1.4:-10868921 MS.gene021504:CDS
GATGACTTCGCTTACTTGCA+TGG 0.492068 1.4:+10869992 None:intergenic
CCTAAATGCTGCATCATTGT+TGG 0.501547 1.4:+10867501 None:intergenic
ATATATGCAGCAGGATGAAT+GGG 0.505037 1.4:-10867661 MS.gene021504:intron
ATTTATAGGGAAGGCCAAGA+TGG 0.507478 1.4:-10868973 MS.gene021504:intron
ATCTCAACAAATGCGAGCCA+TGG 0.513090 1.4:-10869617 MS.gene021504:CDS
GGAAGGAACTCGTGAGAAAG+AGG 0.513889 1.4:-10869757 MS.gene021504:CDS
TGTACCTATTGCCATGAGTA+GGG 0.521891 1.4:+10867148 None:intergenic
CAGAGAATAATAATAACTTA+GGG 0.522455 1.4:-10867203 MS.gene021504:CDS
CCAAGATGGGTACAAAAGAA+TGG 0.522857 1.4:-10868959 MS.gene021504:CDS
AATAACTTAGGGTTTGGTGG+TGG 0.530200 1.4:-10867192 MS.gene021504:CDS
GAAATCGAAATCCGGGAGGT+AGG 0.532076 1.4:+10869730 None:intergenic
TTGTACCTATTGCCATGAGT+AGG 0.535715 1.4:+10867147 None:intergenic
AAATGGGAATATTGATGCAT+TGG 0.541252 1.4:+10867402 None:intergenic
ACTAATAGAGCAACAAACAC+TGG 0.544961 1.4:-10868891 MS.gene021504:CDS
AAATCGAAATCCGGGAGGTA+GGG 0.547523 1.4:+10869731 None:intergenic
TTCAGCTCCAACATGATGAC+AGG 0.548671 1.4:-10867252 MS.gene021504:CDS
TGCTGCATCATTGTTGGTGG+TGG 0.549436 1.4:+10867507 None:intergenic
GAGAAGGATTCACCATTTCA+GGG 0.553123 1.4:-10867359 MS.gene021504:CDS
TCTTTGCACCTGCACTCTTG+CGG 0.553400 1.4:+10867622 None:intergenic
TCATCACCCTTAGGAGGAGA+AGG 0.556810 1.4:-10867375 MS.gene021504:CDS
AAATGCTGCATCATTGTTGG+TGG 0.560573 1.4:+10867504 None:intergenic
TTGTAAGATTTGAGGAAGAA+GGG 0.560765 1.4:+10867595 None:intergenic
ATTATTCTCTGCAGCAACAA+GGG 0.570178 1.4:+10867215 None:intergenic
ATTTGCACCTGTCATCATGT+TGG 0.570618 1.4:+10867245 None:intergenic
GTATGAGTAGTTGATGGCAT+TGG 0.570711 1.4:+10867288 None:intergenic
GTAGGATGAAATCGAAATCC+GGG 0.573405 1.4:+10869723 None:intergenic
TTTATAGGGAAGGCCAAGAT+GGG 0.574283 1.4:-10868972 MS.gene021504:intron
AGGAAGGATTTGGAAATGGA+AGG 0.575195 1.4:-10869774 MS.gene021504:CDS
AAATAAAGTGATCAGTAAGA+AGG 0.577405 1.4:+10867075 None:intergenic
TCTCAACAAATGCGAGCCAT+GGG 0.580584 1.4:-10869616 MS.gene021504:CDS
GTAAGTGATGAGCTCTTCAT+CGG 0.580741 1.4:+10869701 None:intergenic
AATCTCCTTGTCTTTCCCTG+TGG 0.581208 1.4:+10868857 None:intergenic
ACTGGATATTGGAAAACCAC+AGG 0.581954 1.4:-10868873 MS.gene021504:CDS
ACTACAGAAGTTCTAAGAGC+TGG 0.584255 1.4:-10867429 MS.gene021504:CDS
AAAGAGGAAACCCTACCTCC+CGG 0.588423 1.4:-10869741 MS.gene021504:CDS
TTATCATCATCACCCTTAGG+AGG 0.591927 1.4:-10867381 MS.gene021504:CDS
TATTATTCTCTGCAGCAACA+AGG 0.597751 1.4:+10867214 None:intergenic
AATAATGCAAACCCTACTCA+TGG 0.598055 1.4:-10867159 MS.gene021504:CDS
GGCATATTATTATTAAAGCT+AGG 0.598474 1.4:+10867528 None:intergenic
AGTGTTACATCAGAATTGGT+TGG 0.599286 1.4:-10868828 MS.gene021504:CDS
GTGAATCCTTCTCCTCCTAA+GGG 0.600976 1.4:+10867369 None:intergenic
GTGATGAGCTCTTCATCGGT+AGG 0.601835 1.4:+10869705 None:intergenic
TACAAAGGTCGTGCTCCTAG+AGG 0.602672 1.4:-10868783 MS.gene021504:CDS
ATATTCATGCATGACCCAGT+TGG 0.607778 1.4:+10868752 None:intergenic
GGCAATAGGTACAATATGCA+GGG 0.608820 1.4:-10867138 MS.gene021504:CDS
CAAAATAGTTTGTGATGACG+TGG 0.610809 1.4:+10867314 None:intergenic
TAAAGTGATCAGTAAGAAGG+TGG 0.627141 1.4:+10867078 None:intergenic
CTGGATATTGGAAAACCACA+GGG 0.650427 1.4:-10868872 MS.gene021504:CDS
GGGTACTATGGAAAATTGTG+TGG 0.654095 1.4:-10867118 MS.gene021504:CDS
ATATTATTATTAAAGCTAGG+AGG 0.657871 1.4:+10867531 None:intergenic
TATGCAGCAGGATGAATGGG+TGG 0.662923 1.4:-10867658 MS.gene021504:intron
ATCCAGTATAAGAACCAACA+AGG 0.673356 1.4:-10868715 MS.gene021504:intron
ATAGAGCTGAAAATGAGTTG+CGG 0.679738 1.4:+10867470 None:intergenic
GAAAACCACAGGGAAAGACA+AGG 0.680177 1.4:-10868862 MS.gene021504:CDS
TAGAGGAGAGAAAACCAACT+GGG 0.682123 1.4:-10868766 MS.gene021504:CDS
GGATGAAATCGAAATCCGGG+AGG 0.762260 1.4:+10869726 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATATATATA+TGG + chr1.4:10867610-10867591 None:intergenic 0.0%
!! AAAATTTAAAGATGTATAAT+AGG + chr1.4:10868481-10868500 None:intergenic 10.0%
!! AAATTTAAAGATGTATAATA+GGG + chr1.4:10868480-10868499 None:intergenic 10.0%
!! AGAAAAATTAAAATTAGTTA+TGG - chr1.4:10867824-10867843 MS.gene021504:intron 10.0%
!! ATGAAAAAAATTATGATAAT+AGG - chr1.4:10868447-10868466 MS.gene021504:intron 10.0%
!! TGAAAAAAATTATGATAATA+GGG - chr1.4:10868448-10868467 MS.gene021504:intron 10.0%
!! TTTATAAAAACAAAAAACTA+GGG - chr1.4:10867728-10867747 MS.gene021504:intron 10.0%
!!! AAAAAAAAGATTTGATTTTT+AGG - chr1.4:10868860-10868879 MS.gene021504:CDS 10.0%
!!! AAAAATTTAAACTTTTTATG+GGG - chr1.4:10869076-10869095 MS.gene021504:intron 10.0%
!!! CAAAAATTTAAACTTTTTAT+GGG - chr1.4:10869075-10869094 MS.gene021504:intron 10.0%
!!! TCAAAAATTTAAACTTTTTA+TGG - chr1.4:10869074-10869093 MS.gene021504:intron 10.0%
!!! TTTTATTTAATTATATAGTG+TGG - chr1.4:10868022-10868041 MS.gene021504:intron 10.0%
!! CTTTATAAAAACAAAAAACT+AGG - chr1.4:10867727-10867746 MS.gene021504:intron 15.0%
!! GGTTAAGAAAATTAAATATA+GGG + chr1.4:10867164-10867183 None:intergenic 15.0%
!! TAAAAGAAAATTAATATGTC+TGG - chr1.4:10867977-10867996 MS.gene021504:intron 15.0%
!! TTCTTGATAAATGAAAAAAA+GGG + chr1.4:10867557-10867576 None:intergenic 15.0%
!!! AAATTTAAAAGCATGTATAA+AGG + chr1.4:10867186-10867205 None:intergenic 15.0%
!!! AATTTAAAAGCATGTATAAA+GGG + chr1.4:10867185-10867204 None:intergenic 15.0%
!!! ATTTACTTCAATTTTATAGT+AGG + chr1.4:10868732-10868751 None:intergenic 15.0%
!!! ATTTTAGTTTCTTAAACTTT+TGG - chr1.4:10868897-10868916 MS.gene021504:CDS 15.0%
!!! TAACGAATAGAATTTTTTTT+AGG - chr1.4:10869046-10869065 MS.gene021504:intron 15.0%
!!! TAATTTTCTTTTACAAAATG+AGG + chr1.4:10867970-10867989 None:intergenic 15.0%
!!! TTTACTTCAATTTTATAGTA+GGG + chr1.4:10868731-10868750 None:intergenic 15.0%
!!! TTTATACATGCTTTTAAATT+TGG - chr1.4:10867185-10867204 MS.gene021504:CDS 15.0%
!!! TTTTTTGTTTTTATAAAGCA+TGG + chr1.4:10867725-10867744 None:intergenic 15.0%
!! AATAATAATAACTTAGGGTT+TGG - chr1.4:10869878-10869897 MS.gene021504:intron 20.0%
!! AATTCATTTCTTAAACTTGT+GGG - chr1.4:10868943-10868962 MS.gene021504:CDS 20.0%
!! AGTTATATAATATACCTTGT+TGG + chr1.4:10868378-10868397 None:intergenic 20.0%
!! ATATTATTATTAAAGCTAGG+AGG + chr1.4:10869548-10869567 None:intergenic 20.0%
!! CAGAGAATAATAATAACTTA+GGG - chr1.4:10869873-10869892 MS.gene021504:intron 20.0%
!! GGGTTAAGAAAATTAAATAT+AGG + chr1.4:10867165-10867184 None:intergenic 20.0%
!! GTTCTTGATAAATGAAAAAA+AGG + chr1.4:10867558-10867577 None:intergenic 20.0%
!! TAATTCATTTCTTAAACTTG+TGG - chr1.4:10868942-10868961 MS.gene021504:CDS 20.0%
!! TTATGTAAAATTTATAGGGA+AGG - chr1.4:10868094-10868113 MS.gene021504:intron 20.0%
!! TTATTCAGACTATTATAAGA+TGG + chr1.4:10868635-10868654 None:intergenic 20.0%
!!! AAAACTTTGGTTTTTTACAA+AGG - chr1.4:10868278-10868297 MS.gene021504:intron 20.0%
!!! ATTTTTTTCCAATACTATGA+CGG + chr1.4:10869160-10869179 None:intergenic 20.0%
!!! GTTGAAGAAATTTTGTATAT+AGG + chr1.4:10868670-10868689 None:intergenic 20.0%
!!! TCTAAAATTTGTATGCTTTT+TGG + chr1.4:10869201-10869220 None:intergenic 20.0%
!!! TTGGTGACTAAAAATATTAT+AGG + chr1.4:10868701-10868720 None:intergenic 20.0%
! AAGATGAAAGTCATATATTG+TGG + chr1.4:10867887-10867906 None:intergenic 25.0%
! ACTTCTAGATTAATACTGTA+AGG + chr1.4:10869521-10869540 None:intergenic 25.0%
! GCAGAGAATAATAATAACTT+AGG - chr1.4:10869872-10869891 MS.gene021504:intron 25.0%
! GGCATATTATTATTAAAGCT+AGG + chr1.4:10869551-10869570 None:intergenic 25.0%
! TACAGTATTAATCTAGAAGT+TGG - chr1.4:10869521-10869540 MS.gene021504:intron 25.0%
! TTTATAGTAGGGATTCAAAT+TGG + chr1.4:10868720-10868739 None:intergenic 25.0%
!! AAGAGTATATTTGCAAAGTT+GGG + chr1.4:10868776-10868795 None:intergenic 25.0%
!! AATTTTACATGCAAAGCAAT+AGG - chr1.4:10867428-10867447 MS.gene021504:CDS 25.0%
!! TAAGAGTATATTTGCAAAGT+TGG + chr1.4:10868777-10868796 None:intergenic 25.0%
!! TCCAGGTAAAATTTTATGTA+TGG - chr1.4:10867487-10867506 MS.gene021504:CDS 25.0%
!! TCCATACATAAAATTTTACC+TGG + chr1.4:10867491-10867510 None:intergenic 25.0%
!! TTTTATAAAGCATGGATGAA+AGG + chr1.4:10867717-10867736 None:intergenic 25.0%
!!! AATTTGTATGCTTTTTGGAT+TGG + chr1.4:10869196-10869215 None:intergenic 25.0%
!!! TAGTTTTGATGCATTGTTAT+TGG - chr1.4:10869259-10869278 MS.gene021504:intron 25.0%
!!! TGATTTTTAGGTCTAAGTTT+GGG - chr1.4:10868872-10868891 MS.gene021504:CDS 25.0%
!!! TTGATTTTTAGGTCTAAGTT+TGG - chr1.4:10868871-10868890 MS.gene021504:CDS 25.0%
AAATGGGAATATTGATGCAT+TGG + chr1.4:10869677-10869696 None:intergenic 30.0%
AAGAAGTTGTTAGCAAAGAA+AGG - chr1.4:10867282-10867301 MS.gene021504:CDS 30.0%
AATAATAACTTAGGGTTTGG+TGG - chr1.4:10869881-10869900 MS.gene021504:intron 30.0%
ATTCAAATTAAGCCCTGAAA+TGG + chr1.4:10869732-10869751 None:intergenic 30.0%
CTTTCATCTTTCTTGTGATA+TGG - chr1.4:10867897-10867916 MS.gene021504:intron 30.0%
TAGCATTCTTCAATACAACA+TGG + chr1.4:10868509-10868528 None:intergenic 30.0%
TCTTTCTTGTGATATGGTTA+AGG - chr1.4:10867903-10867922 MS.gene021504:intron 30.0%
TTCTTATACTGGATTTGGAA+TGG + chr1.4:10868355-10868374 None:intergenic 30.0%
TTGTAAGATTTGAGGAAGAA+GGG + chr1.4:10869484-10869503 None:intergenic 30.0%
! TAAGGGTGATGATGATAAAT+GGG + chr1.4:10869693-10869712 None:intergenic 30.0%
!! TTTTTGTGTGTTATTCCAGA+AGG - chr1.4:10867256-10867275 MS.gene021504:CDS 30.0%
AATAATGCAAACCCTACTCA+TGG - chr1.4:10869917-10869936 MS.gene021504:intron 35.0%
ACTAATAGAGCAACAAACAC+TGG - chr1.4:10868185-10868204 MS.gene021504:intron 35.0%
AGAAAGGAAGGATTTGGAAA+TGG - chr1.4:10867298-10867317 MS.gene021504:CDS 35.0%
AGAGATCGTAAATATCCAAC+AGG - chr1.4:10868155-10868174 MS.gene021504:intron 35.0%
AGTCAAAACCGTCATAGTAT+TGG - chr1.4:10869149-10869168 MS.gene021504:intron 35.0%
AGTGTTACATCAGAATTGGT+TGG - chr1.4:10868248-10868267 MS.gene021504:intron 35.0%
AGTTGTTAGCAAAGAAAGGA+AGG - chr1.4:10867286-10867305 MS.gene021504:CDS 35.0%
ATAGAGCTGAAAATGAGTTG+CGG + chr1.4:10869609-10869628 None:intergenic 35.0%
ATATATGCAGCAGGATGAAT+GGG - chr1.4:10869415-10869434 MS.gene021504:intron 35.0%
ATCCAGTATAAGAACCAACA+AGG - chr1.4:10868361-10868380 MS.gene021504:intron 35.0%
ATGTCGAATATATATGCAGC+AGG - chr1.4:10869406-10869425 MS.gene021504:intron 35.0%
ATTATTCTCTGCAGCAACAA+GGG + chr1.4:10869864-10869883 None:intergenic 35.0%
CAACAATGATGCAGCATTTA+GGG - chr1.4:10869576-10869595 MS.gene021504:intron 35.0%
CAACAGTGTTACATCAGAAT+TGG - chr1.4:10868244-10868263 MS.gene021504:intron 35.0%
CATTTATCATCATCACCCTT+AGG - chr1.4:10869692-10869711 MS.gene021504:CDS 35.0%
CTTGTAAGATTTGAGGAAGA+AGG + chr1.4:10869485-10869504 None:intergenic 35.0%
TAAATAGACCTCACACAAAG+TGG + chr1.4:10868601-10868620 None:intergenic 35.0%
TAACAACTTCTTTGTCCTTC+TGG + chr1.4:10867274-10867293 None:intergenic 35.0%
TAGCAAAGAAAGGAAGGATT+TGG - chr1.4:10867292-10867311 MS.gene021504:CDS 35.0%
TATATATGCAGCAGGATGAA+TGG - chr1.4:10869414-10869433 MS.gene021504:intron 35.0%
TATTATTCTCTGCAGCAACA+AGG + chr1.4:10869865-10869884 None:intergenic 35.0%
TCTAACACTCACTCTTCTAT+TGG - chr1.4:10868554-10868573 MS.gene021504:intron 35.0%
! CAAAATAGTTTGTGATGACG+TGG + chr1.4:10869765-10869784 None:intergenic 35.0%
! CGTCATCACAAACTATTTTG+AGG - chr1.4:10869765-10869784 MS.gene021504:CDS 35.0%
! CTAAGGGTGATGATGATAAA+TGG + chr1.4:10869694-10869713 None:intergenic 35.0%
! GGTTGGTATGAAGAAAACTT+TGG - chr1.4:10868265-10868284 MS.gene021504:intron 35.0%
! GTTGGTTCTTATACTGGATT+TGG + chr1.4:10868360-10868379 None:intergenic 35.0%
! TCAGGGCTTAATTTGAATCT+TGG - chr1.4:10869734-10869753 MS.gene021504:CDS 35.0%
!! TACCTTGTTGGTTCTTATAC+TGG + chr1.4:10868366-10868385 None:intergenic 35.0%
AAATGCTGCATCATTGTTGG+TGG + chr1.4:10869575-10869594 None:intergenic 40.0%
ACTGGATATTGGAAAACCAC+AGG - chr1.4:10868203-10868222 MS.gene021504:intron 40.0%
AGGAAGGATTTGGAAATGGA+AGG - chr1.4:10867302-10867321 MS.gene021504:CDS 40.0%
ATATTCATGCATGACCCAGT+TGG + chr1.4:10868327-10868346 None:intergenic 40.0%
ATTTATAGGGAAGGCCAAGA+TGG - chr1.4:10868103-10868122 MS.gene021504:intron 40.0%
ATTTGCACCTGTCATCATGT+TGG + chr1.4:10869834-10869853 None:intergenic 40.0%
CCAACAATGATGCAGCATTT+AGG - chr1.4:10869575-10869594 MS.gene021504:intron 40.0%
CCAAGATGGGTACAAAAGAA+TGG - chr1.4:10868117-10868136 MS.gene021504:intron 40.0%
CCTAAATGCTGCATCATTGT+TGG + chr1.4:10869578-10869597 None:intergenic 40.0%
CTGGATATTGGAAAACCACA+GGG - chr1.4:10868204-10868223 MS.gene021504:intron 40.0%
GACTGCTCTTGTAAGATTTG+AGG + chr1.4:10869492-10869511 None:intergenic 40.0%
GAGAAGGATTCACCATTTCA+GGG - chr1.4:10869717-10869736 MS.gene021504:CDS 40.0%
GAGCAACAAACACTGGATAT+TGG - chr1.4:10868192-10868211 MS.gene021504:intron 40.0%
GCCATAGTATGAGTAGTTGA+TGG + chr1.4:10869797-10869816 None:intergenic 40.0%
GCCATCAACTACTCATACTA+TGG - chr1.4:10869793-10869812 MS.gene021504:CDS 40.0%
GGCAATAGGTACAATATGCA+GGG - chr1.4:10869938-10869957 MS.gene021504:intron 40.0%
GGGTACTATGGAAAATTGTG+TGG - chr1.4:10869958-10869977 MS.gene021504:intron 40.0%
GGTAGGATGAAATCGAAATC+CGG + chr1.4:10867357-10867376 None:intergenic 40.0%
GTAAGTGATGAGCTCTTCAT+CGG + chr1.4:10867378-10867397 None:intergenic 40.0%
GTAGGATGAAATCGAAATCC+GGG + chr1.4:10867356-10867375 None:intergenic 40.0%
GTGTGGATCTTGATCATTAC+TGG - chr1.4:10869975-10869994 MS.gene021504:intron 40.0%
TAGAGGAGAGAAAACCAACT+GGG - chr1.4:10868310-10868329 MS.gene021504:intron 40.0%
TGGCAATAGGTACAATATGC+AGG - chr1.4:10869937-10869956 MS.gene021504:intron 40.0%
TGTACCTATTGCCATGAGTA+GGG + chr1.4:10869931-10869950 None:intergenic 40.0%
TTATCATCATCACCCTTAGG+AGG - chr1.4:10869695-10869714 MS.gene021504:CDS 40.0%
TTGTACCTATTGCCATGAGT+AGG + chr1.4:10869932-10869951 None:intergenic 40.0%
TTTATAGGGAAGGCCAAGAT+GGG - chr1.4:10868104-10868123 MS.gene021504:intron 40.0%
! CCATTCTTTTGTACCCATCT+TGG + chr1.4:10868120-10868139 None:intergenic 40.0%
! CTATTAGTTCTCACACCTGT+TGG + chr1.4:10868173-10868192 None:intergenic 40.0%
! CTCATTTTCAGCTCTATGGA+AGG - chr1.4:10869612-10869631 MS.gene021504:CDS 40.0%
! GCAACTCATTTTCAGCTCTA+TGG - chr1.4:10869608-10869627 MS.gene021504:CDS 40.0%
! GGGCTTAATTTGAATCTTGG+AGG - chr1.4:10869737-10869756 MS.gene021504:CDS 40.0%
! GTACAATATGCAGGGTACTA+TGG - chr1.4:10869946-10869965 MS.gene021504:intron 40.0%
!! AATAACTTAGGGTTTGGTGG+TGG - chr1.4:10869884-10869903 MS.gene021504:intron 40.0%
!! ACTACAGAAGTTCTAAGAGC+TGG - chr1.4:10869647-10869666 MS.gene021504:CDS 40.0%
!! GTATGAGTAGTTGATGGCAT+TGG + chr1.4:10869791-10869810 None:intergenic 40.0%
AAATCGAAATCCGGGAGGTA+GGG + chr1.4:10867348-10867367 None:intergenic 45.0%
AATCTCCTTGTCTTTCCCTG+TGG + chr1.4:10868222-10868241 None:intergenic 45.0%
ATAGACCTCACACAAAGTGG+TGG + chr1.4:10868598-10868617 None:intergenic 45.0%
ATCTCAACAAATGCGAGCCA+TGG - chr1.4:10867459-10867478 MS.gene021504:CDS 45.0%
CAAACCCTACTCATGGCAAT+AGG - chr1.4:10869924-10869943 MS.gene021504:intron 45.0%
CTAGAGGAGAGAAAACCAAC+TGG - chr1.4:10868309-10868328 MS.gene021504:intron 45.0%
GAAAACCACAGGGAAAGACA+AGG - chr1.4:10868214-10868233 MS.gene021504:intron 45.0%
GGAGAAGGATTCACCATTTC+AGG - chr1.4:10869716-10869735 MS.gene021504:CDS 45.0%
GTGAATCCTTCTCCTCCTAA+GGG + chr1.4:10869710-10869729 None:intergenic 45.0%
TAGACCTCACACAAAGTGGT+GGG + chr1.4:10868597-10868616 None:intergenic 45.0%
TCTCAACAAATGCGAGCCAT+GGG - chr1.4:10867460-10867479 MS.gene021504:CDS 45.0%
TGTGTGTGTGTGTGTGTTTC+TGG + chr1.4:10869342-10869361 None:intergenic 45.0%
TTCAGCTCCAACATGATGAC+AGG - chr1.4:10869824-10869843 MS.gene021504:intron 45.0%
! ATTTTACCTGGAAGCTCCCA+TGG + chr1.4:10867479-10867498 None:intergenic 45.0%
!!! CAGTTGGTTTTCTCTCCTCT+AGG + chr1.4:10868311-10868330 None:intergenic 45.0%
!! AATAATATATTTAAGAATAA+GGG - chr1.4:10869102-10869121 MS.gene021504:intron 5.0%
!! TAATAATATATTTAAGAATA+AGG - chr1.4:10869101-10869120 MS.gene021504:intron 5.0%
!! TTAATTATGTAAAATTTATA+GGG - chr1.4:10868090-10868109 MS.gene021504:intron 5.0%
!! TTTAATTATGTAAAATTTAT+AGG - chr1.4:10868089-10868108 MS.gene021504:intron 5.0%
!!! GAATTTTTTAATATTTTTTT+AGG + chr1.4:10868998-10869017 None:intergenic 5.0%
AAAGAGGAAACCCTACCTCC+CGG - chr1.4:10867335-10867354 MS.gene021504:CDS 50.0%
ATGTCCCACCACTTTGTGTG+AGG - chr1.4:10868590-10868609 MS.gene021504:intron 50.0%
CACACACACACACACACACA+TGG - chr1.4:10869346-10869365 MS.gene021504:intron 50.0%
GAAATCGAAATCCGGGAGGT+AGG + chr1.4:10867349-10867368 None:intergenic 50.0%
GGAAGGAACTCGTGAGAAAG+AGG - chr1.4:10867319-10867338 MS.gene021504:CDS 50.0%
GGATGAAATCGAAATCCGGG+AGG + chr1.4:10867353-10867372 None:intergenic 50.0%
GGTGAATCCTTCTCCTCCTA+AGG + chr1.4:10869711-10869730 None:intergenic 50.0%
GTGATGAGCTCTTCATCGGT+AGG + chr1.4:10867374-10867393 None:intergenic 50.0%
TACAAAGGTCGTGCTCCTAG+AGG - chr1.4:10868293-10868312 MS.gene021504:intron 50.0%
TATGCAGCAGGATGAATGGG+TGG - chr1.4:10869418-10869437 MS.gene021504:intron 50.0%
TCATCACCCTTAGGAGGAGA+AGG - chr1.4:10869701-10869720 MS.gene021504:CDS 50.0%
TCTTTGCACCTGCACTCTTG+CGG + chr1.4:10869457-10869476 None:intergenic 50.0%
! TGCTGCATCATTGTTGGTGG+TGG + chr1.4:10869572-10869591 None:intergenic 50.0%
! AGAGTGTTCCGCAAGAGTGC+AGG - chr1.4:10869446-10869465 MS.gene021504:intron 55.0%
TGCGAGCCATGGGAGCTTCC+AGG - chr1.4:10867470-10867489 MS.gene021504:CDS 65.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 10867086 10870012 10867086 ID=MS.gene021504
chr1.4 mRNA 10867086 10870012 10867086 ID=MS.gene021504.t1;Parent=MS.gene021504
chr1.4 exon 10870007 10870012 10870007 ID=MS.gene021504.t1.exon1;Parent=MS.gene021504.t1
chr1.4 CDS 10870007 10870012 10870007 ID=cds.MS.gene021504.t1;Parent=MS.gene021504.t1
chr1.4 exon 10869607 10869823 10869607 ID=MS.gene021504.t1.exon2;Parent=MS.gene021504.t1
chr1.4 CDS 10869607 10869823 10869607 ID=cds.MS.gene021504.t1;Parent=MS.gene021504.t1
chr1.4 exon 10868716 10868987 10868716 ID=MS.gene021504.t1.exon3;Parent=MS.gene021504.t1
chr1.4 CDS 10868716 10868987 10868716 ID=cds.MS.gene021504.t1;Parent=MS.gene021504.t1
chr1.4 exon 10867086 10867673 10867086 ID=MS.gene021504.t1.exon4;Parent=MS.gene021504.t1
chr1.4 CDS 10867086 10867673 10867086 ID=cds.MS.gene021504.t1;Parent=MS.gene021504.t1
Gene Sequence

>MS.gene021504

ATGCAAGTAAGCGAAGTCATCATCAATCAAACAAACTTTTGCACATAGCTTTTATTGTTTGAAAAATTTGTAAAACCCTATATTTAATTTTCTTAACCCTTTATACATGCTTTTAAATTTGGAAAATTTTCAAGCTAGCTCATAAGACAACTATTTGTACATCATGACACTTTTTGTGTGTTATTCCAGAAGGACAAAGAAGTTGTTAGCAAAGAAAGGAAGGATTTGGAAATGGAAGGAACTCGTGAGAAAGAGGAAACCCTACCTCCCGGATTTCGATTTCATCCTACCGATGAAGAGCTCATCACTTACTATCTTGTAAACAAGATTTCAGATTCTGTAAATTTTACATGCAAAGCAATAGGTGATGTAGATCTCAACAAATGCGAGCCATGGGAGCTTCCAGGTAAAATTTTATGTATGGATCTTTTGTTTAATTGAAGATTCACTTGACTCTATTTGATTTTTCCCTTTTTTTCATTTATCAAGAACAAGAATAGATCCATATATATATATATATATATATATATGTATATATATATATATATATATATATATATATATATATATATATATATATATCGATACTAAATATTTGTTTTGTAATTCATCTACTTAATTTACTTTTCCTTTCATCCATGCTTTATAAAAACAAAAAACTAGGGTTTCTTCAAGATTCTACTATTAGCTACAACAAATTAAGCAGCTAACTCATAAACACAACAATTTCTTCATACTAGAAAAATTAAAATTAGTTATGGAAAAAATGATTGTATCATAACTAATCTTTTTGTTTTTCCACAATATATGACTTTCATCTTTCTTGTGATATGGTTAAGGTTTACTATAGTATATACAAAATTTTATTTTATTTCATAAATCCTCATTTTGTAAAAGAAAATTAATATGTCTGGCAAATTAAATATGATAATTTAATTTTATTTAATTATATAGTGTGGTTTTCTCTAGTAAATTGAGTTTATTAATTTTTTTCTTCTAATTATTTAATTATGTAAAATTTATAGGGAAGGCCAAGATGGGTACAAAAGAATGGTATTTCTTCAGTCTAAGAGATCGTAAATATCCAACAGGTGTGAGAACTAATAGAGCAACAAACACTGGATATTGGAAAACCACAGGGAAAGACAAGGAGATTTTCAACAGTGTTACATCAGAATTGGTTGGTATGAAGAAAACTTTGGTTTTTTACAAAGGTCGTGCTCCTAGAGGAGAGAAAACCAACTGGGTCATGCATGAATATCGTATCCATTCCAAATCCAGTATAAGAACCAACAAGGTATATTATATAACTTATATCTACATAATCATAATAAGTTAATTCATAAGCACAAAATGAAGTAATGAAAAAAATTATGATAATAGGGCGTAAACCCTATTATACATCTTTAAATTTTACAAACCATGTTGTATTGAAGAATGCTAGCAACACTCACTTTTGAACACTCTCTCTAACACTCACTCTTCTATTGGATGAAATCAATGTATGTCCCACCACTTTGTGTGAGGTCTATTTAAATAACATGCTCCATCTTATAATAGTCTGAATAAGAATAAAAGAAACCTATATACAAAATTTCTTCAACTTTTAATTCCTATAATATTTTTAGTCACCAATTTGAATCCCTACTATAAAATTGAAGTAAATTGAGACACTATTAAAATGCTACCCAACTTTGCAAATATACTCTTATGTAGTAATTTTTTTTTTTTGACAAAATACTCTATATTGTAATTAGAAGTCTCTGCAAAAAAAAAAAAAAAGATTTGATTTTTAGGTCTAAGTTTGGGTTATTTTAGTTTCTTAAACTTTTGGTATTTTAAAAAAAAATCATATTTAATTCATTTCTTAAACTTGTGGGTAAAGATGTTTATAATGTTCTTTAACATACCTAAAAAAATATTAAAAAATTCAAAGTAAACACATGAATTAACTTAGCTATAACGAATAGAATTTTTTTTAGGTAAAATCAAAAATTTAAACTTTTTATGGGGACTAATAATATATTTAAGAATAAGGGTATTGTAACTAAGATACAAGTTTAAGTCAAAACCGTCATAGTATTGGAAAAAAATCTTATGATCACAACCAATCCAAAAAGCATACAAATTTTAGAAATTTATATTCATAAATCATACTATATAATCATGCATTTAGTTTTGATGCATTGTTATTGGTATTAAAAAATGATAGACTGTTAATCAATCACAAAATCAGTTATAAGTTTATCATATCCAGAAACACACACACACACACACACACACACACATGGACATAATCAACTAGTTACAATAATGATTAATGTCGAATATATATGCAGCAGGATGAATGGGTGGTAAGCAGAGTGTTCCGCAAGAGTGCAGGTGCAAAGAAGTACCCTTCTTCCTCAAATCTTACAAGAGCAGTCATGAATCCTTACAGTATTAATCTAGAAGTTGGTCCTCCTAGCTTTAATAATAATATGCCACCACCAACAATGATGCAGCATTTAGGGCTAGATTCCGCAACTCATTTTCAGCTCTATGGAAGGAACTACATCAACACTACAGAAGTTCTAAGAGCTGGTGTACCAATGCATCAATATTCCCATTTATCATCATCACCCTTAGGAGGAGAAGGATTCACCATTTCAGGGCTTAATTTGAATCTTGGAGGTTCCACGTCATCACAAACTATTTTGAGGCCAATGCCATCAACTACTCATACTATGGCTGCTGATTTCAGCTCCAACATGATGACAGGTGCAAATAGTAATACCCTTGTTGCTGCAGAGAATAATAATAACTTAGGGTTTGGTGGTGGAGATCAAGTGAATAATGCAAACCCTACTCATGGCAATAGGTACAATATGCAGGGTACTATGGAAAATTGTGTGGATCTTGATCATTACTGGCCACCTTCTTACTGA
Protein sequence

>MS.gene021504.t1

MQKDKEVVSKERKDLEMEGTREKEETLPPGFRFHPTDEELITYYLVNKISDSVNFTCKAIGDVDLNKCEPWELPGKAKMGTKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSVTSELVGMKKTLVFYKGRAPRGEKTNWVMHEYRIHSKSSIRTNKQDEWVVSRVFRKSAGAKKYPSSSNLTRAVMNPYSINLEVGPPSFNNNMPPPTMMQHLGLDSATHFQLYGRNYINTTEVLRAGVPMHQYSHLSSSPLGGEGFTISGLNLNLGGSTSSQTILRPMPSTTHTMAADFSSNMMTGANSNTLVAAENNNNLGFGGGDQVNNANPTHGNRYNMQGTMENCVDLDHYWPPSY