Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021509.t1 | XP_003588595.1 | 95.9 | 339 | 11 | 2 | 1 | 337 | 1 | 338 | 1.60E-171 | 612.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021509.t1 | Q9FUD3 | 50.4 | 234 | 89 | 6 | 112 | 337 | 62 | 276 | 4.5e-42 | 173.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021509.t1 | G7I545 | 95.9 | 339 | 11 | 2 | 1 | 337 | 1 | 338 | 1.1e-171 | 612.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene021509.t1 | TF | bZIP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021509.t1 | MTR_1g008990 | 95.870 | 339 | 11 | 2 | 1 | 337 | 1 | 338 | 0.0 | 660 |
| MS.gene021509.t1 | MTR_1g008990 | 93.902 | 246 | 12 | 2 | 1 | 244 | 1 | 245 | 5.83e-156 | 437 |
| MS.gene021509.t1 | MTR_3g109310 | 63.177 | 277 | 75 | 13 | 71 | 337 | 35 | 294 | 2.01e-97 | 290 |
| MS.gene021509.t1 | MTR_3g110010 | 66.929 | 127 | 38 | 4 | 174 | 297 | 633 | 758 | 1.53e-38 | 145 |
| MS.gene021509.t1 | MTR_3g109982 | 66.142 | 127 | 39 | 4 | 174 | 297 | 649 | 774 | 3.85e-38 | 144 |
| MS.gene021509.t1 | MTR_1g080920 | 58.065 | 124 | 48 | 2 | 139 | 258 | 177 | 300 | 9.53e-27 | 109 |
| MS.gene021509.t1 | MTR_7g115120 | 52.381 | 147 | 54 | 4 | 117 | 258 | 150 | 285 | 1.60e-25 | 105 |
| MS.gene021509.t1 | MTR_7g115140 | 43.810 | 105 | 58 | 1 | 138 | 242 | 103 | 206 | 7.01e-19 | 84.0 |
| MS.gene021509.t1 | MTR_1g022495 | 29.747 | 158 | 96 | 2 | 142 | 299 | 3 | 145 | 9.94e-12 | 62.8 |
| MS.gene021509.t1 | MTR_3g117120 | 41.558 | 77 | 45 | 0 | 167 | 243 | 27 | 103 | 1.15e-11 | 62.4 |
| MS.gene021509.t1 | MTR_8g086020 | 35.294 | 85 | 55 | 0 | 165 | 249 | 30 | 114 | 3.97e-11 | 61.2 |
| MS.gene021509.t1 | MTR_8g015250 | 43.478 | 92 | 47 | 1 | 151 | 242 | 60 | 146 | 6.00e-11 | 61.2 |
| MS.gene021509.t1 | MTR_6g016375 | 40.385 | 104 | 56 | 3 | 155 | 257 | 77 | 175 | 6.87e-11 | 61.2 |
| MS.gene021509.t1 | MTR_7g029400 | 43.478 | 92 | 47 | 1 | 151 | 242 | 70 | 156 | 7.35e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021509.t1 | AT5G24800 | 50.427 | 234 | 89 | 6 | 112 | 337 | 62 | 276 | 2.50e-60 | 195 |
| MS.gene021509.t1 | AT5G28770 | 58.333 | 108 | 43 | 1 | 154 | 259 | 130 | 237 | 2.35e-24 | 101 |
| MS.gene021509.t1 | AT5G28770 | 58.333 | 108 | 43 | 1 | 154 | 259 | 137 | 244 | 2.79e-24 | 101 |
| MS.gene021509.t1 | AT5G28770 | 61.111 | 90 | 35 | 0 | 154 | 243 | 137 | 226 | 2.12e-20 | 89.4 |
| MS.gene021509.t1 | AT4G02640 | 53.097 | 113 | 51 | 1 | 143 | 253 | 188 | 300 | 1.30e-15 | 77.8 |
| MS.gene021509.t1 | AT4G02640 | 53.097 | 113 | 51 | 1 | 143 | 253 | 194 | 306 | 1.36e-15 | 77.8 |
| MS.gene021509.t1 | AT4G02640 | 53.097 | 113 | 51 | 1 | 143 | 253 | 194 | 306 | 1.42e-15 | 77.4 |
| MS.gene021509.t1 | AT4G02640 | 53.097 | 113 | 51 | 1 | 143 | 253 | 188 | 300 | 1.66e-15 | 77.4 |
| MS.gene021509.t1 | AT3G54620 | 51.136 | 88 | 43 | 0 | 166 | 253 | 227 | 314 | 4.30e-13 | 70.1 |
| MS.gene021509.t1 | AT1G75390 | 39.759 | 83 | 50 | 0 | 167 | 249 | 38 | 120 | 9.15e-12 | 63.2 |
| MS.gene021509.t1 | AT2G18160 | 36.190 | 105 | 57 | 1 | 145 | 249 | 16 | 110 | 1.46e-11 | 62.8 |
| MS.gene021509.t1 | AT3G30530 | 39.773 | 88 | 53 | 0 | 155 | 242 | 66 | 153 | 6.82e-11 | 60.8 |
Find 75 sgRNAs with CRISPR-Local
Find 281 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTTCTTGGGAGTGAGGTTT+TGG | 0.180329 | 1.4:-10806424 | None:intergenic |
| TGTTCAATTGACTCTGATTT+TGG | 0.206784 | 1.4:-10808890 | None:intergenic |
| AGTATTACCGGTGGCATAAA+TGG | 0.282549 | 1.4:-10806480 | None:intergenic |
| GGCAGAATGGTGCTCCATTT+TGG | 0.285783 | 1.4:-10803666 | None:intergenic |
| GTCATCGAAGCTGGAGAATA+TGG | 0.297219 | 1.4:-10803697 | None:intergenic |
| CATCTGTAAGCTGCTTAAAT+AGG | 0.310185 | 1.4:-10808414 | None:intergenic |
| TTTGGCAGACCTTGAGGTTC+AGG | 0.310946 | 1.4:+10808232 | MS.gene021509:CDS |
| CCTGCGAAATGGAACCAAAA+TGG | 0.330729 | 1.4:+10803652 | None:intergenic |
| CTAAGACGCTTCATATCAAC+AGG | 0.337570 | 1.4:-10807447 | None:intergenic |
| TGCAGTGATGGTGGAGTTCT+TGG | 0.341951 | 1.4:-10806438 | None:intergenic |
| TGAGCTCTTTGACTAGCTTA+TGG | 0.345147 | 1.4:+10809093 | MS.gene021509:CDS |
| AAGAAGAAAACAAGCACATT+TGG | 0.358483 | 1.4:+10808214 | MS.gene021509:CDS |
| TGTTGTTGTAGTCACTCCTT+TGG | 0.367802 | 1.4:-10807358 | None:intergenic |
| GGTGAAGTTAGCAGAGGATA+TGG | 0.388906 | 1.4:+10808827 | MS.gene021509:intron |
| ATTGTTGTTTCGACGGTAAC+GGG | 0.405328 | 1.4:-10803768 | None:intergenic |
| CAGAATTCAGCTATTGGACT+TGG | 0.407633 | 1.4:+10809014 | MS.gene021509:CDS |
| AGTGGACAGAATTCAGCTAT+TGG | 0.421178 | 1.4:+10809008 | MS.gene021509:CDS |
| CCAGCTTCGATGACCTCAAA+TGG | 0.421645 | 1.4:+10803706 | MS.gene021509:CDS |
| CTGGAGAATATGGAGGTTGC+TGG | 0.422279 | 1.4:-10803687 | None:intergenic |
| TTTCCATGGACGGTGATTGT+AGG | 0.427364 | 1.4:-10808966 | None:intergenic |
| CATGGAAACGACGCTTCATA+TGG | 0.432634 | 1.4:+10808981 | MS.gene021509:CDS |
| CAAACAAGAGTATTATTTGT+TGG | 0.433570 | 1.4:-10806398 | None:intergenic |
| CACTAGTAATCTCCGTTGTA+TGG | 0.434010 | 1.4:+10808932 | MS.gene021509:CDS |
| GATTGTTGTTTCGACGGTAA+CGG | 0.434855 | 1.4:-10803769 | None:intergenic |
| TGTTAGCATCGCGAAATTGT+TGG | 0.440152 | 1.4:-10808441 | None:intergenic |
| TTGATATGAAGCGTCTTAGA+AGG | 0.440492 | 1.4:+10807451 | MS.gene021509:CDS |
| CCATTTGAGGTCATCGAAGC+TGG | 0.443299 | 1.4:-10803706 | None:intergenic |
| TTAGGTTGAACAGCTGAGGC+TGG | 0.444559 | 1.4:+10808381 | MS.gene021509:intron |
| CATATGAAGCGTCGTTTCCA+TGG | 0.454343 | 1.4:-10808980 | None:intergenic |
| GACGCTTCATATGGTGTTAG+TGG | 0.460901 | 1.4:+10808990 | MS.gene021509:CDS |
| ACATCGCCGACACCGATGAA+TGG | 0.462932 | 1.4:-10803825 | None:intergenic |
| ATTCTGCTGTGATCCATTTG+AGG | 0.470171 | 1.4:-10803719 | None:intergenic |
| AGCAGAGGATATGGTCTCTA+GGG | 0.483549 | 1.4:+10808836 | MS.gene021509:CDS |
| GCAGTGATGGTGGAGTTCTT+GGG | 0.488823 | 1.4:-10806437 | None:intergenic |
| TGGTGGAGTTCTTGGGAGTG+AGG | 0.489497 | 1.4:-10806430 | None:intergenic |
| AGATTACTAGTGTTGATTTG+TGG | 0.491316 | 1.4:-10808921 | None:intergenic |
| ACTGACCAGATTATGAAAAT+CGG | 0.504341 | 1.4:-10803874 | None:intergenic |
| TAGCAGAGGATATGGTCTCT+AGG | 0.512033 | 1.4:+10808835 | MS.gene021509:CDS |
| CGATGTAAAACCGTGTAAGA+TGG | 0.513999 | 1.4:+10803800 | MS.gene021509:CDS |
| AGAAGCTGGTTGTTAAAAGT+AGG | 0.514450 | 1.4:-10808867 | None:intergenic |
| TGCAGTCATGATTTCAACAA+TGG | 0.523773 | 1.4:+10809053 | MS.gene021509:CDS |
| TGTTGAAGCTTTAAGAGCTA+AGG | 0.529338 | 1.4:+10808489 | MS.gene021509:CDS |
| AGCTCTTAAAGCTTCAACAT+CGG | 0.530694 | 1.4:-10808485 | None:intergenic |
| GCTTCATCATCTTCATCAGA+TGG | 0.530813 | 1.4:-10807399 | None:intergenic |
| CTCAATAGTTGCAGTGATGG+TGG | 0.531409 | 1.4:-10806447 | None:intergenic |
| ACATGTTGAAAATGAAGTTA+CGG | 0.531605 | 1.4:-10806369 | None:intergenic |
| TTTCTTAGGTTGAACAGCTG+AGG | 0.532387 | 1.4:+10808377 | MS.gene021509:intron |
| TCGCCTACAATCACCGTCCA+TGG | 0.536280 | 1.4:+10808963 | MS.gene021509:CDS |
| GTCGTCGATTGTTGTTTCGA+CGG | 0.537944 | 1.4:-10803775 | None:intergenic |
| CAATCATCCATTTATGCCAC+CGG | 0.538188 | 1.4:+10806473 | MS.gene021509:CDS |
| TGAAGCGTCGTTTCCATGGA+CGG | 0.541190 | 1.4:-10808976 | None:intergenic |
| AGCATCGCGAAATTGTTGGC+TGG | 0.553901 | 1.4:-10808437 | None:intergenic |
| GGTGTCGGCGATGTTTGCTC+TGG | 0.562967 | 1.4:+10803834 | MS.gene021509:CDS |
| CTAGGTTTATTAGCTGACAC+TGG | 0.571493 | 1.4:-10807321 | None:intergenic |
| AGCACATTTGGCAGACCTTG+AGG | 0.572432 | 1.4:+10808226 | MS.gene021509:CDS |
| TCTGATGAAGATGATGAAGC+AGG | 0.584800 | 1.4:+10807402 | MS.gene021509:CDS |
| GGGTTTGTACTTTGTTCACA+AGG | 0.595616 | 1.4:-10807426 | None:intergenic |
| AATTAATTACCTGAACCTCA+AGG | 0.595756 | 1.4:-10808241 | None:intergenic |
| ATGGATCCATTCATCGGTGT+CGG | 0.602190 | 1.4:+10803819 | MS.gene021509:CDS |
| AGACTCAATAGTTGCAGTGA+TGG | 0.603647 | 1.4:-10806450 | None:intergenic |
| AGTAGAGAAAATCAAACCAA+AGG | 0.615439 | 1.4:+10807342 | MS.gene021509:CDS |
| TATGGAGGTTGCTGGCAGAA+TGG | 0.618667 | 1.4:-10803679 | None:intergenic |
| GGAGTGACTACAACAACAAG+TGG | 0.619797 | 1.4:+10807363 | MS.gene021509:CDS |
| TTACTAGTGTTGATTTGTGG+CGG | 0.621086 | 1.4:-10808918 | None:intergenic |
| TGTAAGATGGATCCATTCAT+CGG | 0.623168 | 1.4:+10803813 | MS.gene021509:CDS |
| GCGAAACATGCGCCATACAA+CGG | 0.641264 | 1.4:-10808944 | None:intergenic |
| AATTTAGGTGAAGTTAGCAG+AGG | 0.643088 | 1.4:+10808821 | MS.gene021509:intron |
| ATGAATGGATCCATCTTACA+CGG | 0.644634 | 1.4:-10803810 | None:intergenic |
| TTCATCAGATGGATCACGTG+AGG | 0.658342 | 1.4:-10807388 | None:intergenic |
| GACCAGATTATGAAAATCGG+CGG | 0.666849 | 1.4:-10803871 | None:intergenic |
| CTAATCGCGAGTCTGCCAGA+AGG | 0.671078 | 1.4:+10808186 | MS.gene021509:CDS |
| AGTGTTGATTTGTGGCGGAG+TGG | 0.681459 | 1.4:-10808913 | None:intergenic |
| GCAGAGGATATGGTCTCTAG+GGG | 0.691454 | 1.4:+10808837 | MS.gene021509:CDS |
| ATCGAAGCTGGAGAATATGG+AGG | 0.698276 | 1.4:-10803694 | None:intergenic |
| TAAGACGCTTCATATCAACA+GGG | 0.724365 | 1.4:-10807446 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATAAAATCACATTTAA+AGG | - | chr1.4:10808006-10808025 | None:intergenic | 10.0% |
| !! | ACAATATATATAAACTATTA+TGG | - | chr1.4:10807227-10807246 | None:intergenic | 10.0% |
| !! | ATATAATAGTAAATATAAAG+TGG | + | chr1.4:10806796-10806815 | MS.gene021509:intron | 10.0% |
| !! | CAAAATAAATAAATATAAAG+TGG | + | chr1.4:10806847-10806866 | MS.gene021509:intron | 10.0% |
| !! | TTATGACAAAATAATAAATT+CGG | + | chr1.4:10804388-10804407 | MS.gene021509:intron | 10.0% |
| !!! | AAACTAAATTTTACATTTTA+AGG | - | chr1.4:10804157-10804176 | None:intergenic | 10.0% |
| !!! | AGAAATCATATTATTTTTTT+GGG | + | chr1.4:10807680-10807699 | MS.gene021509:intron | 10.0% |
| !!! | CACTTTATATTTATTTATTT+TGG | - | chr1.4:10806849-10806868 | None:intergenic | 10.0% |
| !!! | CATAATTTTAACATTTTAAT+TGG | - | chr1.4:10806697-10806716 | None:intergenic | 10.0% |
| !!! | GTTTTTAATTGAATTAATTT+TGG | - | chr1.4:10808112-10808131 | None:intergenic | 10.0% |
| !!! | TTTATTATATTTTGTTTCTT+AGG | + | chr1.4:10808363-10808382 | MS.gene021509:intron | 10.0% |
| !!! | TTTTTTTTTTTTGTTACAAA+AGG | - | chr1.4:10808293-10808312 | None:intergenic | 10.0% |
| !! | AAAAAAAGAAACAATTCATT+AGG | - | chr1.4:10805995-10806014 | None:intergenic | 15.0% |
| !! | AATTTATAGTAAGATGAATT+AGG | + | chr1.4:10805498-10805517 | MS.gene021509:intron | 15.0% |
| !! | ATAGAATACATCAATTATAA+AGG | - | chr1.4:10804285-10804304 | None:intergenic | 15.0% |
| !! | ATATAATAAAATTCTCATAG+TGG | - | chr1.4:10808353-10808372 | None:intergenic | 15.0% |
| !! | GTAAAAAAAATGAATAGAAA+AGG | + | chr1.4:10805664-10805683 | MS.gene021509:intron | 15.0% |
| !! | TAAGTAATCTTATCTTATAT+TGG | - | chr1.4:10807108-10807127 | None:intergenic | 15.0% |
| !! | TCTTATAATATATAAACTCA+TGG | - | chr1.4:10807661-10807680 | None:intergenic | 15.0% |
| !!! | AAATCATATTATTTTTTTGG+GGG | + | chr1.4:10807682-10807701 | MS.gene021509:intron | 15.0% |
| !!! | ATTTTATAAATTCTCAATGT+TGG | + | chr1.4:10807515-10807534 | MS.gene021509:intron | 15.0% |
| !!! | ATTTTTTTTGTCTTTTACTT+TGG | + | chr1.4:10804858-10804877 | MS.gene021509:intron | 15.0% |
| !!! | GAAATCATATTATTTTTTTG+GGG | + | chr1.4:10807681-10807700 | MS.gene021509:intron | 15.0% |
| !!! | GAGAAATCATATTATTTTTT+TGG | + | chr1.4:10807679-10807698 | MS.gene021509:intron | 15.0% |
| !!! | TTAGATACTTTTATTTCAAA+AGG | + | chr1.4:10805142-10805161 | MS.gene021509:intron | 15.0% |
| !!! | TTTCTATGTTGTTTTATTTA+GGG | + | chr1.4:10805918-10805937 | MS.gene021509:intron | 15.0% |
| !!! | TTTTCTATGTTGTTTTATTT+AGG | + | chr1.4:10805917-10805936 | MS.gene021509:intron | 15.0% |
| !!! | TTTTTTTTGTCTTTTACTTT+GGG | + | chr1.4:10804859-10804878 | MS.gene021509:intron | 15.0% |
| !! | AAATCATCATTTATTATTGC+TGG | + | chr1.4:10804028-10804047 | MS.gene021509:intron | 20.0% |
| !! | AATATAATAGAAAAGAAGAG+AGG | - | chr1.4:10805579-10805598 | None:intergenic | 20.0% |
| !! | ACAATGAAGTTATCTATAAA+GGG | - | chr1.4:10807181-10807200 | None:intergenic | 20.0% |
| !! | ACATGGATTTCTTAAATTTA+TGG | - | chr1.4:10806911-10806930 | None:intergenic | 20.0% |
| !! | AGAGAAATTATAATCTAACA+AGG | + | chr1.4:10807707-10807726 | MS.gene021509:intron | 20.0% |
| !! | ATATAATAGAAAAGAAGAGA+GGG | - | chr1.4:10805578-10805597 | None:intergenic | 20.0% |
| !! | ATGGAATTTGGTATATTTAA+AGG | + | chr1.4:10804628-10804647 | MS.gene021509:intron | 20.0% |
| !! | ATTAACCAAACAACAAAAAT+AGG | - | chr1.4:10805383-10805402 | None:intergenic | 20.0% |
| !! | TAAATATAAAGTGGAGTTTA+GGG | + | chr1.4:10806805-10806824 | MS.gene021509:intron | 20.0% |
| !! | TACAATGAAGTTATCTATAA+AGG | - | chr1.4:10807182-10807201 | None:intergenic | 20.0% |
| !! | TCTATCTTAATTCTTTGATT+TGG | - | chr1.4:10804582-10804601 | None:intergenic | 20.0% |
| !! | TGGAATTTGGTATATTTAAA+GGG | + | chr1.4:10804629-10804648 | MS.gene021509:intron | 20.0% |
| !! | TTAACCAAACAACAAAAATA+GGG | - | chr1.4:10805382-10805401 | None:intergenic | 20.0% |
| !! | TTCAAAAAAATTCTCAATGT+TGG | + | chr1.4:10807542-10807561 | MS.gene021509:intron | 20.0% |
| !!! | AAATTGATTTTGGTATGTTT+TGG | + | chr1.4:10807905-10807924 | MS.gene021509:intron | 20.0% |
| !!! | AAGAATTTTATGTCCAATTT+AGG | + | chr1.4:10808806-10808825 | MS.gene021509:intron | 20.0% |
| !!! | AATCATATTATTTTTTTGGG+GGG | + | chr1.4:10807683-10807702 | MS.gene021509:intron | 20.0% |
| !!! | AATTGTAGGACTAAATTTTA+AGG | + | chr1.4:10806965-10806984 | MS.gene021509:intron | 20.0% |
| !!! | ACATTTTTTCCTGAATTAAT+AGG | - | chr1.4:10806133-10806152 | None:intergenic | 20.0% |
| !!! | AGAAATATGTTTCTTTTCTT+TGG | + | chr1.4:10806595-10806614 | MS.gene021509:intron | 20.0% |
| !!! | AGAGTTTTTTTTTATGTGAA+TGG | + | chr1.4:10804609-10804628 | MS.gene021509:intron | 20.0% |
| !!! | ATATATCATAGAGCTTATTT+TGG | + | chr1.4:10807269-10807288 | MS.gene021509:intron | 20.0% |
| !!! | ATGATTTTTTACCTTCTTTA+AGG | - | chr1.4:10806050-10806069 | None:intergenic | 20.0% |
| !!! | ATTAAAGAAGAACTTTTACT+AGG | + | chr1.4:10807595-10807614 | MS.gene021509:intron | 20.0% |
| !!! | ATTATAAAGGTTGATTTGAT+TGG | - | chr1.4:10804272-10804291 | None:intergenic | 20.0% |
| !!! | ATTTATTTTGGTACAAAAGA+GGG | - | chr1.4:10806837-10806856 | None:intergenic | 20.0% |
| !!! | GTATCACTACAATTTTAATT+TGG | - | chr1.4:10804480-10804499 | None:intergenic | 20.0% |
| !!! | TACATTTTAAGGTGAATAAT+CGG | - | chr1.4:10804146-10804165 | None:intergenic | 20.0% |
| !!! | TATATAACATAGAGTATTAC+CGG | - | chr1.4:10806495-10806514 | None:intergenic | 20.0% |
| !!! | TATTTATTTTGGTACAAAAG+AGG | - | chr1.4:10806838-10806857 | None:intergenic | 20.0% |
| !!! | TCAATAATTCATGTTTGTTT+TGG | - | chr1.4:10804515-10804534 | None:intergenic | 20.0% |
| !!! | TGAAGACTTAAAATTGATTT+TGG | + | chr1.4:10807895-10807914 | MS.gene021509:intron | 20.0% |
| !!! | TGCATATTTGAATTTACTTT+TGG | + | chr1.4:10807854-10807873 | MS.gene021509:intron | 20.0% |
| !!! | TTCTATGTTGTTTTATTTAG+GGG | + | chr1.4:10805919-10805938 | MS.gene021509:intron | 20.0% |
| !!! | TTTGCCAAAAATAATTTGTT+GGG | + | chr1.4:10808738-10808757 | MS.gene021509:intron | 20.0% |
| !!! | TTTTGCCAAAAATAATTTGT+TGG | + | chr1.4:10808737-10808756 | MS.gene021509:intron | 20.0% |
| !!! | TTTTGGATTGAATTGTATAA+TGG | + | chr1.4:10807286-10807305 | MS.gene021509:intron | 20.0% |
| !!! | TTTTTAATAGTGTTTGATTG+AGG | - | chr1.4:10805603-10805622 | None:intergenic | 20.0% |
| !!! | TTTTTTATGTGAATGGAATT+TGG | + | chr1.4:10804616-10804635 | MS.gene021509:intron | 20.0% |
| ! | AAAAATGTTGTGTGACATAT+CGG | + | chr1.4:10808616-10808635 | MS.gene021509:intron | 25.0% |
| ! | AATAAAGACGTGTAAATGAA+AGG | + | chr1.4:10806019-10806038 | MS.gene021509:intron | 25.0% |
| ! | AATATAATAGAGCAACAACA+TGG | + | chr1.4:10805687-10805706 | MS.gene021509:intron | 25.0% |
| ! | ACATGTTGAAAATGAAGTTA+CGG | - | chr1.4:10806372-10806391 | None:intergenic | 25.0% |
| ! | AGGTTGTCAACTTTATTAAT+AGG | - | chr1.4:10806113-10806132 | None:intergenic | 25.0% |
| ! | ATAAAGTGGAGTCTTAAAAT+AGG | + | chr1.4:10806861-10806880 | MS.gene021509:intron | 25.0% |
| ! | ATAACTAGTGATTTCAAAGA+TGG | - | chr1.4:10808317-10808336 | None:intergenic | 25.0% |
| ! | ATATAATAGAGCAACAACAT+GGG | + | chr1.4:10805688-10805707 | MS.gene021509:intron | 25.0% |
| ! | CAATAATACTATAACTAGCT+AGG | - | chr1.4:10805831-10805850 | None:intergenic | 25.0% |
| ! | GAAATTATAATCTAACAAGG+TGG | + | chr1.4:10807710-10807729 | MS.gene021509:intron | 25.0% |
| ! | GACAAATTGAAAAGGAATAT+AGG | + | chr1.4:10805642-10805661 | MS.gene021509:intron | 25.0% |
| ! | GAGATTCCTATTTGAATAAA+GGG | + | chr1.4:10805345-10805364 | MS.gene021509:intron | 25.0% |
| ! | GTAAATATAAAGTGGAGTTT+AGG | + | chr1.4:10806804-10806823 | MS.gene021509:intron | 25.0% |
| ! | TAATATATAAACTCATGGTC+TGG | - | chr1.4:10807656-10807675 | None:intergenic | 25.0% |
| ! | TAGAAAAGCTAAGCTATAAA+AGG | - | chr1.4:10805904-10805923 | None:intergenic | 25.0% |
| ! | TCATTTATTATTGCTGGTAA+TGG | + | chr1.4:10804034-10804053 | MS.gene021509:intron | 25.0% |
| ! | TGAGATTCCTATTTGAATAA+AGG | + | chr1.4:10805344-10805363 | MS.gene021509:intron | 25.0% |
| ! | TGCATAATATATGCAAAGTA+CGG | + | chr1.4:10804988-10805007 | MS.gene021509:intron | 25.0% |
| ! | TTACAAGTGACAAATTGAAA+AGG | + | chr1.4:10805634-10805653 | MS.gene021509:intron | 25.0% |
| ! | TTACGATTAGATTGCAAAAA+CGG | + | chr1.4:10808546-10808565 | MS.gene021509:intron | 25.0% |
| ! | TTTGCAAGCAAAATTTATAC+TGG | - | chr1.4:10806538-10806557 | None:intergenic | 25.0% |
| !! | AAAATTCTCATAGTGGAAAT+TGG | - | chr1.4:10808346-10808365 | None:intergenic | 25.0% |
| !! | CATATTTGTTAAGAGTCTAT+TGG | - | chr1.4:10805776-10805795 | None:intergenic | 25.0% |
| !! | GACTAATACAAGGTTTTTAT+TGG | + | chr1.4:10805167-10805186 | MS.gene021509:intron | 25.0% |
| !! | GCTATAATTCATTCTTTTCT+CGG | - | chr1.4:10805552-10805571 | None:intergenic | 25.0% |
| !! | GGACATAATTTTCATATAGA+AGG | - | chr1.4:10805726-10805745 | None:intergenic | 25.0% |
| !! | GGATTTATCTAGTTCAAAAT+AGG | - | chr1.4:10807635-10807654 | None:intergenic | 25.0% |
| !! | TATCCCCAACAAATTATTTT+TGG | - | chr1.4:10808745-10808764 | None:intergenic | 25.0% |
| !! | TTACATGAATTTGATGATCT+TGG | - | chr1.4:10808697-10808716 | None:intergenic | 25.0% |
| !! | TTAGAGTAATGTTATTTGTC+TGG | - | chr1.4:10806295-10806314 | None:intergenic | 25.0% |
| !!! | ACATTTTAAGGTGAATAATC+GGG | - | chr1.4:10804145-10804164 | None:intergenic | 25.0% |
| !!! | ATTAGAGATATTCAAGTTGT+TGG | + | chr1.4:10804342-10804361 | MS.gene021509:intron | 25.0% |
| !!! | CAAACAAGAGTATTATTTGT+TGG | - | chr1.4:10806401-10806420 | None:intergenic | 25.0% |
| !!! | CATGAACATCTTTTTTTTTG+TGG | - | chr1.4:10805031-10805050 | None:intergenic | 25.0% |
| !!! | GAATTCTTGATTTGTAATCA+CGG | - | chr1.4:10808653-10808672 | None:intergenic | 25.0% |
| !!! | GGGATTTTTAAGATAATTGT+AGG | + | chr1.4:10806951-10806970 | MS.gene021509:intron | 25.0% |
| !!! | TATCTTTACTTTTCATGAAG+TGG | + | chr1.4:10805804-10805823 | MS.gene021509:intron | 25.0% |
| !!! | TGTTTGTTTTGGTAGAATTA+CGG | - | chr1.4:10804504-10804523 | None:intergenic | 25.0% |
| !!! | TTGCCAAAAATAATTTGTTG+GGG | + | chr1.4:10808739-10808758 | MS.gene021509:intron | 25.0% |
| !!! | TTTGATTTATACCTTTTGCT+TGG | + | chr1.4:10805956-10805975 | MS.gene021509:intron | 25.0% |
| AAGAAGAAAACAAGCACATT+TGG | + | chr1.4:10808214-10808233 | MS.gene021509:CDS | 30.0% | |
| AATCCATGTAATCATGAAGT+TGG | + | chr1.4:10806922-10806941 | MS.gene021509:intron | 30.0% | |
| AATTAATTACCTGAACCTCA+AGG | - | chr1.4:10808244-10808263 | None:intergenic | 30.0% | |
| ACTAATTGACAACCAAACTT+TGG | + | chr1.4:10805281-10805300 | MS.gene021509:intron | 30.0% | |
| ACTGACCAGATTATGAAAAT+CGG | - | chr1.4:10803877-10803896 | None:intergenic | 30.0% | |
| AGTAGAGAAAATCAAACCAA+AGG | + | chr1.4:10807342-10807361 | MS.gene021509:CDS | 30.0% | |
| AGTCAAACATTAAACATGCA+TGG | + | chr1.4:10805111-10805130 | MS.gene021509:intron | 30.0% | |
| AGTTGACAACCTATTAATTC+AGG | + | chr1.4:10806121-10806140 | MS.gene021509:intron | 30.0% | |
| ATATTTAAAGGGTGAAGCAA+AGG | + | chr1.4:10804640-10804659 | MS.gene021509:intron | 30.0% | |
| CAAACTATATAACTTCAAGC+TGG | - | chr1.4:10807974-10807993 | None:intergenic | 30.0% | |
| CAATCTAATCGTAATACACA+TGG | - | chr1.4:10808540-10808559 | None:intergenic | 30.0% | |
| CATAATATATGCAAAGTACG+GGG | + | chr1.4:10804990-10805009 | MS.gene021509:intron | 30.0% | |
| CATGTGATATTGAAGAAACT+TGG | - | chr1.4:10805470-10805489 | None:intergenic | 30.0% | |
| GAAAGGAATATCCTTAAAGA+AGG | + | chr1.4:10806036-10806055 | MS.gene021509:intron | 30.0% | |
| GCATAATATATGCAAAGTAC+GGG | + | chr1.4:10804989-10805008 | MS.gene021509:intron | 30.0% | |
| GCTACATCTGAAAATTTGAT+AGG | + | chr1.4:10806070-10806089 | MS.gene021509:intron | 30.0% | |
| TAATACAACCGTAGTTAGTA+GGG | - | chr1.4:10803979-10803998 | None:intergenic | 30.0% | |
| TACACTCTTAATGTGATTTC+AGG | + | chr1.4:10808156-10808175 | MS.gene021509:intron | 30.0% | |
| TATAGCGAATAACCATTGTA+TGG | - | chr1.4:10805201-10805220 | None:intergenic | 30.0% | |
| TATCAAAGTAGAAACTCCAA+AGG | - | chr1.4:10804065-10804084 | None:intergenic | 30.0% | |
| TCAAAAGGAAGACTAATACA+AGG | + | chr1.4:10805157-10805176 | MS.gene021509:intron | 30.0% | |
| TCACATAGCTAGAATTTGAT+TGG | + | chr1.4:10806221-10806240 | MS.gene021509:intron | 30.0% | |
| TGAAAATTATGTCCAATGCA+TGG | + | chr1.4:10805732-10805751 | MS.gene021509:intron | 30.0% | |
| TGTAATTATGACTGTTGCAT+TGG | - | chr1.4:10807136-10807155 | None:intergenic | 30.0% | |
| TTAATACAACCGTAGTTAGT+AGG | - | chr1.4:10803980-10803999 | None:intergenic | 30.0% | |
| TTCCATCCCTTTATTCAAAT+AGG | - | chr1.4:10805354-10805373 | None:intergenic | 30.0% | |
| TTCCTATTTGAATAAAGGGA+TGG | + | chr1.4:10805349-10805368 | MS.gene021509:intron | 30.0% | |
| ! | ACTTTGTTTAGTGATGAAGA+AGG | + | chr1.4:10804689-10804708 | MS.gene021509:intron | 30.0% |
| ! | ATTTTCATATAGAAGGCCAA+AGG | - | chr1.4:10805719-10805738 | None:intergenic | 30.0% |
| ! | CTTTTTGTGTTATGATGCAA+TGG | + | chr1.4:10807036-10807055 | MS.gene021509:intron | 30.0% |
| ! | GTAACTTCATTTTCAACATG+TGG | + | chr1.4:10806371-10806390 | MS.gene021509:CDS | 30.0% |
| !! | AGATTACTAGTGTTGATTTG+TGG | - | chr1.4:10808924-10808943 | None:intergenic | 30.0% |
| !! | TGTTCAATTGACTCTGATTT+TGG | - | chr1.4:10808893-10808912 | None:intergenic | 30.0% |
| !! | TTGGTTTGATTTTCTCTACT+AGG | - | chr1.4:10807342-10807361 | None:intergenic | 30.0% |
| !!! | AGTTTTTTAGGAGAAGCATA+GGG | - | chr1.4:10805527-10805546 | None:intergenic | 30.0% |
| !!! | ATCTTTTTTTTTGTGGTGGT+CGG | - | chr1.4:10805024-10805043 | None:intergenic | 30.0% |
| !!! | CTTTTCTCGGTTAGTTTTTT+AGG | - | chr1.4:10805539-10805558 | None:intergenic | 30.0% |
| !!! | GAAACCCTATTTTTGTTGTT+TGG | + | chr1.4:10805375-10805394 | MS.gene021509:intron | 30.0% |
| !!! | GAACATCTTTTTTTTTGTGG+TGG | - | chr1.4:10805028-10805047 | None:intergenic | 30.0% |
| !!! | TAGTTTTTTAGGAGAAGCAT+AGG | - | chr1.4:10805528-10805547 | None:intergenic | 30.0% |
| AAACGTTTCCCTACTAACTA+CGG | + | chr1.4:10803968-10803987 | MS.gene021509:intron | 35.0% | |
| AAGGGCTGAATTAAGAACAA+TGG | - | chr1.4:10806334-10806353 | None:intergenic | 35.0% | |
| AAGTTCTATCACAAAACCAC+AGG | - | chr1.4:10804552-10804571 | None:intergenic | 35.0% | |
| AATCATGAAGTTGGCAAGTT+GGG | + | chr1.4:10806931-10806950 | MS.gene021509:intron | 35.0% | |
| AATTATGACTGTTGCATTGG+TGG | - | chr1.4:10807133-10807152 | None:intergenic | 35.0% | |
| AATTTAGGTGAAGTTAGCAG+AGG | + | chr1.4:10808821-10808840 | MS.gene021509:intron | 35.0% | |
| ACATGGAAGAACTTGTAAAG+TGG | - | chr1.4:10808523-10808542 | None:intergenic | 35.0% | |
| ACCTAATAGATACCATGCAT+TGG | - | chr1.4:10805747-10805766 | None:intergenic | 35.0% | |
| ACTGAAACATGAACATCTAG+AGG | - | chr1.4:10804929-10804948 | None:intergenic | 35.0% | |
| AGAAGCTGGTTGTTAAAAGT+AGG | - | chr1.4:10808870-10808889 | None:intergenic | 35.0% | |
| AGCTCTTAAAGCTTCAACAT+CGG | - | chr1.4:10808488-10808507 | None:intergenic | 35.0% | |
| ATCATACATGTGATCGTATG+TGG | - | chr1.4:10806202-10806221 | None:intergenic | 35.0% | |
| ATGAATGGATCCATCTTACA+CGG | - | chr1.4:10803813-10803832 | None:intergenic | 35.0% | |
| ATTATTGCCCACAATCTTAG+CGG | + | chr1.4:10805844-10805863 | MS.gene021509:intron | 35.0% | |
| CATCTGTAAGCTGCTTAAAT+AGG | - | chr1.4:10808417-10808436 | None:intergenic | 35.0% | |
| CCATAAATTCTGTCTGCATA+AGG | + | chr1.4:10805070-10805089 | MS.gene021509:intron | 35.0% | |
| CCTTATGCAGACAGAATTTA+TGG | - | chr1.4:10805073-10805092 | None:intergenic | 35.0% | |
| CGAATAACCATTGTATGGTT+TGG | - | chr1.4:10805196-10805215 | None:intergenic | 35.0% | |
| CTATTGTCATCATGTACATG+TGG | - | chr1.4:10807770-10807789 | None:intergenic | 35.0% | |
| CTCTTAATGTGATTTCAGGA+AGG | + | chr1.4:10808160-10808179 | MS.gene021509:intron | 35.0% | |
| GCATAAGGTGATTATTTACG+AGG | + | chr1.4:10805085-10805104 | MS.gene021509:intron | 35.0% | |
| GTGTTCAACTTTCACGTTAA+CGG | + | chr1.4:10808033-10808052 | MS.gene021509:intron | 35.0% | |
| TAAGACGCTTCATATCAACA+GGG | - | chr1.4:10807449-10807468 | None:intergenic | 35.0% | |
| TAATCATGAAGTTGGCAAGT+TGG | + | chr1.4:10806930-10806949 | MS.gene021509:intron | 35.0% | |
| TCCAATGCATGGTATCTATT+AGG | + | chr1.4:10805743-10805762 | MS.gene021509:intron | 35.0% | |
| TCTGCTAACTTCACCTAAAT+TGG | - | chr1.4:10808822-10808841 | None:intergenic | 35.0% | |
| TGCAGTCATGATTTCAACAA+TGG | + | chr1.4:10809053-10809072 | MS.gene021509:CDS | 35.0% | |
| TGTAAGATGGATCCATTCAT+CGG | + | chr1.4:10803813-10803832 | MS.gene021509:CDS | 35.0% | |
| TGTGTTATGATGCAATGGTT+GGG | + | chr1.4:10807041-10807060 | MS.gene021509:intron | 35.0% | |
| TTGCCAACTTCATGATTACA+TGG | - | chr1.4:10806928-10806947 | None:intergenic | 35.0% | |
| TTGTGTTATGATGCAATGGT+TGG | + | chr1.4:10807040-10807059 | MS.gene021509:intron | 35.0% | |
| TTTGTAATCACGGTATGTGT+TGG | - | chr1.4:10808643-10808662 | None:intergenic | 35.0% | |
| ! | ATAACATAGAGTATTACCGG+TGG | - | chr1.4:10806492-10806511 | None:intergenic | 35.0% |
| ! | ATTATGACTGTTGCATTGGT+GGG | - | chr1.4:10807132-10807151 | None:intergenic | 35.0% |
| ! | GTTTTTGCTTTCCAAGCAAA+AGG | - | chr1.4:10805970-10805989 | None:intergenic | 35.0% |
| ! | TTGATATGAAGCGTCTTAGA+AGG | + | chr1.4:10807451-10807470 | MS.gene021509:CDS | 35.0% |
| ! | TTGATCATGAACTTTTCACG+AGG | + | chr1.4:10803742-10803761 | MS.gene021509:CDS | 35.0% |
| !! | AGAGATATTCAAGTTGTTGG+AGG | + | chr1.4:10804345-10804364 | MS.gene021509:intron | 35.0% |
| !! | ATGTGCTTGTTTTCTTCTTC+TGG | - | chr1.4:10808213-10808232 | None:intergenic | 35.0% |
| !! | GAGATATTCAAGTTGTTGGA+GGG | + | chr1.4:10804346-10804365 | MS.gene021509:intron | 35.0% |
| !! | TAAAGTGGAGTTTAGGGTTT+TGG | + | chr1.4:10806811-10806830 | MS.gene021509:intron | 35.0% |
| !! | TGTTGAAGCTTTAAGAGCTA+AGG | + | chr1.4:10808489-10808508 | MS.gene021509:CDS | 35.0% |
| !! | TTACTAGTGTTGATTTGTGG+CGG | - | chr1.4:10808921-10808940 | None:intergenic | 35.0% |
| !!! | TCTTTTTTTTTGTGGTGGTC+GGG | - | chr1.4:10805023-10805042 | None:intergenic | 35.0% |
| AAGCTTGAAAGTCACGTTAG+AGG | - | chr1.4:10803942-10803961 | None:intergenic | 40.0% | |
| AGACTCAATAGTTGCAGTGA+TGG | - | chr1.4:10806453-10806472 | None:intergenic | 40.0% | |
| AGTATTACCGGTGGCATAAA+TGG | - | chr1.4:10806483-10806502 | None:intergenic | 40.0% | |
| AGTGGACAGAATTCAGCTAT+TGG | + | chr1.4:10809008-10809027 | MS.gene021509:CDS | 40.0% | |
| ATTCAGCCCTTCATAATTGC+AGG | + | chr1.4:10806343-10806362 | MS.gene021509:intron | 40.0% | |
| ATTCTGCTGTGATCCATTTG+AGG | - | chr1.4:10803722-10803741 | None:intergenic | 40.0% | |
| CAATCATCCATTTATGCCAC+CGG | + | chr1.4:10806473-10806492 | MS.gene021509:CDS | 40.0% | |
| CACTAGTAATCTCCGTTGTA+TGG | + | chr1.4:10808932-10808951 | MS.gene021509:CDS | 40.0% | |
| CAGAATTCAGCTATTGGACT+TGG | + | chr1.4:10809014-10809033 | MS.gene021509:CDS | 40.0% | |
| CGATGTAAAACCGTGTAAGA+TGG | + | chr1.4:10803800-10803819 | MS.gene021509:CDS | 40.0% | |
| CGATTAGATTGCAAAAACGG+AGG | + | chr1.4:10808549-10808568 | MS.gene021509:intron | 40.0% | |
| CTAAGACGCTTCATATCAAC+AGG | - | chr1.4:10807450-10807469 | None:intergenic | 40.0% | |
| CTAGGTTTATTAGCTGACAC+TGG | - | chr1.4:10807324-10807343 | None:intergenic | 40.0% | |
| GAAAGCAAACATGAAACCTG+TGG | + | chr1.4:10804533-10804552 | MS.gene021509:intron | 40.0% | |
| GACCAGATTATGAAAATCGG+CGG | - | chr1.4:10803874-10803893 | None:intergenic | 40.0% | |
| GCTTCATCATCTTCATCAGA+TGG | - | chr1.4:10807402-10807421 | None:intergenic | 40.0% | |
| GGGTTTGTACTTTGTTCACA+AGG | - | chr1.4:10807429-10807448 | None:intergenic | 40.0% | |
| GTGTTATGATGCAATGGTTG+GGG | + | chr1.4:10807042-10807061 | MS.gene021509:intron | 40.0% | |
| TCTGATGAAGATGATGAAGC+AGG | + | chr1.4:10807402-10807421 | MS.gene021509:CDS | 40.0% | |
| TGAAGCAAAGGAACTTGTGA+AGG | + | chr1.4:10804652-10804671 | MS.gene021509:intron | 40.0% | |
| TGAGAGACATGTCCAAAGTT+TGG | - | chr1.4:10805296-10805315 | None:intergenic | 40.0% | |
| TGTTAGCATCGCGAAATTGT+TGG | - | chr1.4:10808444-10808463 | None:intergenic | 40.0% | |
| TGTTGTTGTAGTCACTCCTT+TGG | - | chr1.4:10807361-10807380 | None:intergenic | 40.0% | |
| TTATTGCCCACAATCTTAGC+GGG | + | chr1.4:10805845-10805864 | MS.gene021509:intron | 40.0% | |
| TTGGCTTCCAAACCATACAA+TGG | + | chr1.4:10805186-10805205 | MS.gene021509:intron | 40.0% | |
| ! | ATCATGAACTTTTCACGAGG+CGG | + | chr1.4:10803745-10803764 | MS.gene021509:CDS | 40.0% |
| ! | GTGTTGTCTTTTGAACTCGT+GGG | + | chr1.4:10804796-10804815 | MS.gene021509:intron | 40.0% |
| ! | TGTGTTGTCTTTTGAACTCG+TGG | + | chr1.4:10804795-10804814 | MS.gene021509:intron | 40.0% |
| ! | TTATGACTGTTGCATTGGTG+GGG | - | chr1.4:10807131-10807150 | None:intergenic | 40.0% |
| ! | TTTTCTTCTTCTGGACCTTC+TGG | - | chr1.4:10808204-10808223 | None:intergenic | 40.0% |
| !! | ATTGTTGTTTCGACGGTAAC+GGG | - | chr1.4:10803771-10803790 | None:intergenic | 40.0% |
| !! | CAACATCGGATTTTAGCACT+CGG | - | chr1.4:10808474-10808493 | None:intergenic | 40.0% |
| !! | GATTGTTGTTTCGACGGTAA+CGG | - | chr1.4:10803772-10803791 | None:intergenic | 40.0% |
| !! | TGAGCTCTTTGACTAGCTTA+TGG | + | chr1.4:10809093-10809112 | MS.gene021509:CDS | 40.0% |
| !! | TTTCTTAGGTTGAACAGCTG+AGG | + | chr1.4:10808377-10808396 | MS.gene021509:intron | 40.0% |
| !!! | CTTTTTTTTTGTGGTGGTCG+GGG | - | chr1.4:10805022-10805041 | None:intergenic | 40.0% |
| !!! | GCTGGTAATGGTTTTTCCTT+TGG | + | chr1.4:10804046-10804065 | MS.gene021509:intron | 40.0% |
| AACAACATGGGTCGTTCCTT+TGG | + | chr1.4:10805700-10805719 | MS.gene021509:intron | 45.0% | |
| AACACTCCACCTCTTTCACA+AGG | - | chr1.4:10805872-10805891 | None:intergenic | 45.0% | |
| ACGGCATCCTGCAATTATGA+AGG | - | chr1.4:10806353-10806372 | None:intergenic | 45.0% | |
| AGCAGAGGATATGGTCTCTA+GGG | + | chr1.4:10808836-10808855 | MS.gene021509:CDS | 45.0% | |
| ATCGAAGCTGGAGAATATGG+AGG | - | chr1.4:10803697-10803716 | None:intergenic | 45.0% | |
| ATGGATCCATTCATCGGTGT+CGG | + | chr1.4:10803819-10803838 | MS.gene021509:CDS | 45.0% | |
| CATGGAAACGACGCTTCATA+TGG | + | chr1.4:10808981-10809000 | MS.gene021509:CDS | 45.0% | |
| CGGCATCCTGCAATTATGAA+GGG | - | chr1.4:10806352-10806371 | None:intergenic | 45.0% | |
| CTCAATAGTTGCAGTGATGG+TGG | - | chr1.4:10806450-10806469 | None:intergenic | 45.0% | |
| GGAGTGACTACAACAACAAG+TGG | + | chr1.4:10807363-10807382 | MS.gene021509:CDS | 45.0% | |
| GGTGAAGTTAGCAGAGGATA+TGG | + | chr1.4:10808827-10808846 | MS.gene021509:intron | 45.0% | |
| GTCATCGAAGCTGGAGAATA+TGG | - | chr1.4:10803700-10803719 | None:intergenic | 45.0% | |
| TAGCAGAGGATATGGTCTCT+AGG | + | chr1.4:10808835-10808854 | MS.gene021509:CDS | 45.0% | |
| TGGACATGTCTCTCAACAGA+AGG | + | chr1.4:10805301-10805320 | MS.gene021509:intron | 45.0% | |
| TGGGAACGCACTACTTTATG+AGG | + | chr1.4:10804815-10804834 | MS.gene021509:intron | 45.0% | |
| TTCATCAGATGGATCACGTG+AGG | - | chr1.4:10807391-10807410 | None:intergenic | 45.0% | |
| TTTCCATGGACGGTGATTGT+AGG | - | chr1.4:10808969-10808988 | None:intergenic | 45.0% | |
| ! | AAACAAAGTCCCTGATGACG+TGG | - | chr1.4:10804678-10804697 | None:intergenic | 45.0% |
| ! | AGTTCTTGGGAGTGAGGTTT+TGG | - | chr1.4:10806427-10806446 | None:intergenic | 45.0% |
| ! | GACGCTTCATATGGTGTTAG+TGG | + | chr1.4:10808990-10809009 | MS.gene021509:CDS | 45.0% |
| ! | GTTCTTGGGAGTGAGGTTTT+GGG | - | chr1.4:10806426-10806445 | None:intergenic | 45.0% |
| !! | CATATGAAGCGTCGTTTCCA+TGG | - | chr1.4:10808983-10809002 | None:intergenic | 45.0% |
| !! | GACTCTGATTTTGGAGAAGC+TGG | - | chr1.4:10808884-10808903 | None:intergenic | 45.0% |
| !! | GTCGTCGATTGTTGTTTCGA+CGG | - | chr1.4:10803778-10803797 | None:intergenic | 45.0% |
| !!! | CACCGCCGATTTTCATAATC+TGG | + | chr1.4:10803869-10803888 | MS.gene021509:CDS | 45.0% |
| ACAACTGAGCTAAGCTCACG+AGG | - | chr1.4:10804959-10804978 | None:intergenic | 50.0% | |
| ACAAGGACCCGCTAAGATTG+TGG | - | chr1.4:10805855-10805874 | None:intergenic | 50.0% | |
| AGCACATTTGGCAGACCTTG+AGG | + | chr1.4:10808226-10808245 | MS.gene021509:CDS | 50.0% | |
| AGCATCGCGAAATTGTTGGC+TGG | - | chr1.4:10808440-10808459 | None:intergenic | 50.0% | |
| CAAGGACCCGCTAAGATTGT+GGG | - | chr1.4:10805854-10805873 | None:intergenic | 50.0% | |
| CCAGCTTCGATGACCTCAAA+TGG | + | chr1.4:10803706-10803725 | MS.gene021509:CDS | 50.0% | |
| CTGGAGAATATGGAGGTTGC+TGG | - | chr1.4:10803690-10803709 | None:intergenic | 50.0% | |
| GCAGAGGATATGGTCTCTAG+GGG | + | chr1.4:10808837-10808856 | MS.gene021509:CDS | 50.0% | |
| GCGAAACATGCGCCATACAA+CGG | - | chr1.4:10808947-10808966 | None:intergenic | 50.0% | |
| TATGGAGGTTGCTGGCAGAA+TGG | - | chr1.4:10803682-10803701 | None:intergenic | 50.0% | |
| TTGTGAAGGCCACGTCATCA+GGG | + | chr1.4:10804666-10804685 | MS.gene021509:intron | 50.0% | |
| TTTGGCAGACCTTGAGGTTC+AGG | + | chr1.4:10808232-10808251 | MS.gene021509:CDS | 50.0% | |
| ! | CCATTTGAGGTCATCGAAGC+TGG | - | chr1.4:10803709-10803728 | None:intergenic | 50.0% |
| ! | GGCAGAATGGTGCTCCATTT+TGG | - | chr1.4:10803669-10803688 | None:intergenic | 50.0% |
| ! | TTAGCGGGTCCTTGTGAAAG+AGG | + | chr1.4:10805860-10805879 | MS.gene021509:intron | 50.0% |
| !! | AGTGTTGATTTGTGGCGGAG+TGG | - | chr1.4:10808916-10808935 | None:intergenic | 50.0% |
| !! | GCAGTGATGGTGGAGTTCTT+GGG | - | chr1.4:10806440-10806459 | None:intergenic | 50.0% |
| !! | TGAAGCGTCGTTTCCATGGA+CGG | - | chr1.4:10808979-10808998 | None:intergenic | 50.0% |
| !! | TGCAGTGATGGTGGAGTTCT+TGG | - | chr1.4:10806441-10806460 | None:intergenic | 50.0% |
| !! | TTAGGTTGAACAGCTGAGGC+TGG | + | chr1.4:10808381-10808400 | MS.gene021509:intron | 50.0% |
| ACATCGCCGACACCGATGAA+TGG | - | chr1.4:10803828-10803847 | None:intergenic | 55.0% | |
| AGCTAAGCTCACGAGGACTG+AGG | - | chr1.4:10804952-10804971 | None:intergenic | 55.0% | |
| CTAATCGCGAGTCTGCCAGA+AGG | + | chr1.4:10808186-10808205 | MS.gene021509:CDS | 55.0% | |
| CTTGTGAAGGCCACGTCATC+AGG | + | chr1.4:10804665-10804684 | MS.gene021509:intron | 55.0% | |
| TCGCCTACAATCACCGTCCA+TGG | + | chr1.4:10808963-10808982 | MS.gene021509:CDS | 55.0% | |
| TGGTGGAGTTCTTGGGAGTG+AGG | - | chr1.4:10806433-10806452 | None:intergenic | 55.0% | |
| GCGGGTCCTTGTGAAAGAGG+TGG | + | chr1.4:10805863-10805882 | MS.gene021509:intron | 60.0% | |
| !! | GGTGTCGGCGATGTTTGCTC+TGG | + | chr1.4:10803834-10803853 | MS.gene021509:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 10803660 | 10809121 | 10803660 | ID=MS.gene021509 |
| chr1.4 | mRNA | 10803660 | 10809121 | 10803660 | ID=MS.gene021509.t1;Parent=MS.gene021509 |
| chr1.4 | exon | 10803660 | 10803890 | 10803660 | ID=MS.gene021509.t1.exon1;Parent=MS.gene021509.t1 |
| chr1.4 | CDS | 10803660 | 10803890 | 10803660 | ID=cds.MS.gene021509.t1;Parent=MS.gene021509.t1 |
| chr1.4 | exon | 10806365 | 10806494 | 10806365 | ID=MS.gene021509.t1.exon2;Parent=MS.gene021509.t1 |
| chr1.4 | CDS | 10806365 | 10806494 | 10806365 | ID=cds.MS.gene021509.t1;Parent=MS.gene021509.t1 |
| chr1.4 | exon | 10807313 | 10807472 | 10807313 | ID=MS.gene021509.t1.exon3;Parent=MS.gene021509.t1 |
| chr1.4 | CDS | 10807313 | 10807472 | 10807313 | ID=cds.MS.gene021509.t1;Parent=MS.gene021509.t1 |
| chr1.4 | exon | 10808178 | 10808253 | 10808178 | ID=MS.gene021509.t1.exon4;Parent=MS.gene021509.t1 |
| chr1.4 | CDS | 10808178 | 10808253 | 10808178 | ID=cds.MS.gene021509.t1;Parent=MS.gene021509.t1 |
| chr1.4 | exon | 10808385 | 10808510 | 10808385 | ID=MS.gene021509.t1.exon5;Parent=MS.gene021509.t1 |
| chr1.4 | CDS | 10808385 | 10808510 | 10808385 | ID=cds.MS.gene021509.t1;Parent=MS.gene021509.t1 |
| chr1.4 | exon | 10808828 | 10809121 | 10808828 | ID=MS.gene021509.t1.exon6;Parent=MS.gene021509.t1 |
| chr1.4 | CDS | 10808828 | 10809121 | 10808828 | ID=cds.MS.gene021509.t1;Parent=MS.gene021509.t1 |
| Gene Sequence |
| Protein sequence |
