AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene02168

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene02168.t1 MTR_2g024390 99.209 253 2 0 1 253 122 374 0.0 534
MS.gene02168.t1 MTR_5g085860 65.873 252 71 4 1 247 51 292 7.28e-102 298
MS.gene02168.t1 MTR_1g017080 60.000 245 88 3 1 237 124 366 2.73e-87 264
MS.gene02168.t1 MTR_5g033720 55.459 229 100 1 2 228 78 306 2.76e-81 246
MS.gene02168.t1 MTR_1g084060 50.833 240 98 5 2 228 25 257 1.34e-66 207
MS.gene02168.t1 MTR_1g084060 50.833 240 98 5 2 228 25 257 3.76e-66 208
MS.gene02168.t1 MTR_1g012960 29.688 256 147 5 1 226 178 430 1.72e-35 131
MS.gene02168.t1 MTR_3g106400 28.889 270 161 6 1 240 111 379 4.15e-34 127
MS.gene02168.t1 MTR_4g116545 31.405 242 139 6 1 216 75 315 5.05e-34 125
MS.gene02168.t1 MTR_2g461240 30.453 243 140 6 1 216 99 339 5.72e-34 126
MS.gene02168.t1 MTR_4g116545 31.405 242 139 6 1 216 75 315 5.94e-34 125
MS.gene02168.t1 MTR_3g106400 29.675 246 142 4 1 216 111 355 6.02e-34 126
MS.gene02168.t1 MTR_3g106400 29.675 246 142 4 1 216 111 355 6.07e-34 126
MS.gene02168.t1 MTR_5g011070 28.000 250 139 4 2 216 33 276 4.26e-29 112
MS.gene02168.t1 MTR_4g019450 42.667 75 43 0 144 218 347 421 2.33e-12 66.6
MS.gene02168.t1 MTR_7g065050 48.333 60 31 0 159 218 307 366 4.08e-12 65.9
MS.gene02168.t1 MTR_3g112300 39.535 86 46 2 133 218 327 406 7.84e-12 65.1
MS.gene02168.t1 MTR_3g112300 39.535 86 46 2 133 218 327 406 8.83e-12 65.1
MS.gene02168.t1 MTR_3g112290 42.254 71 41 0 148 218 339 409 9.54e-12 64.7
MS.gene02168.t1 MTR_1g023050 42.254 71 38 1 148 218 350 417 1.72e-11 64.3
MS.gene02168.t1 MTR_8g078480 40.230 87 47 3 139 222 558 642 2.56e-11 63.5
MS.gene02168.t1 MTR_4g051532 46.667 60 32 0 159 218 404 463 3.15e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene02168.t1 AT1G62360 78.295 258 50 4 1 253 126 382 8.37e-130 372
MS.gene02168.t1 AT4G08150 58.964 251 85 5 1 237 139 385 1.13e-87 266
MS.gene02168.t1 AT1G23380 50.000 246 103 3 2 237 91 326 1.88e-78 240
MS.gene02168.t1 AT1G70510 49.576 236 119 0 2 237 75 310 5.17e-78 238
MS.gene02168.t1 AT1G23380 49.597 248 103 4 2 237 91 328 2.08e-76 234
MS.gene02168.t1 AT1G70510 48.750 240 119 1 2 237 75 314 1.13e-75 232
MS.gene02168.t1 AT5G25220 31.950 241 138 5 1 216 164 403 4.74e-38 138
MS.gene02168.t1 AT5G25220 31.950 241 138 5 1 216 164 403 6.73e-38 137
MS.gene02168.t1 AT4G32040 31.250 240 141 3 1 216 123 362 4.81e-37 134
MS.gene02168.t1 AT4G32040 31.250 240 141 3 1 216 123 362 6.25e-37 134
MS.gene02168.t1 AT5G11060 30.705 241 141 6 1 216 128 367 3.83e-34 127
MS.gene02168.t1 AT1G62990 30.864 243 138 6 2 216 35 275 5.49e-31 116
MS.gene02168.t1 AT1G75430 49.091 55 28 0 164 218 209 263 4.35e-12 65.1
MS.gene02168.t1 AT5G02030 46.667 60 32 0 159 218 350 409 1.28e-11 64.7
MS.gene02168.t1 AT1G19700 46.667 60 32 0 159 218 353 412 1.41e-11 64.3
MS.gene02168.t1 AT1G19700 46.667 60 32 0 159 218 353 412 1.41e-11 64.3
MS.gene02168.t1 AT1G19700 46.667 60 32 0 159 218 353 412 1.41e-11 64.3
MS.gene02168.t1 AT1G19700 46.667 60 32 0 159 218 353 412 1.41e-11 64.3
MS.gene02168.t1 AT1G19700 46.667 60 32 0 159 218 353 412 1.41e-11 64.3
MS.gene02168.t1 AT1G75410 45.000 60 33 0 159 218 348 407 6.69e-11 62.4
MS.gene02168.t1 AT1G75410 45.000 60 33 0 159 218 348 407 6.69e-11 62.4
MS.gene02168.t1 AT4G36870 39.024 82 46 2 139 218 480 559 6.82e-11 62.4
MS.gene02168.t1 AT4G36870 39.024 82 46 2 139 218 480 559 6.82e-11 62.4
MS.gene02168.t1 AT2G27220 45.000 60 33 0 159 218 230 289 8.44e-11 62.0
MS.gene02168.t1 AT2G27220 45.000 60 33 0 159 218 230 289 8.44e-11 62.0
MS.gene02168.t1 AT2G35940 46.667 60 32 0 159 218 387 446 8.55e-11 62.0
MS.gene02168.t1 AT2G35940 46.667 60 32 0 159 218 387 446 8.55e-11 62.0
MS.gene02168.t1 AT2G35940 46.667 60 32 0 159 218 387 446 8.55e-11 62.0
MS.gene02168.t1 AT2G23760 40.278 72 41 1 147 218 416 485 8.64e-11 62.0
MS.gene02168.t1 AT2G23760 40.278 72 41 1 147 218 416 485 8.64e-11 62.0
MS.gene02168.t1 AT2G23760 40.278 72 41 1 147 218 416 485 8.64e-11 62.0
MS.gene02168.t1 AT5G41410 46.667 60 32 0 159 218 393 452 9.14e-11 62.0
MS.gene02168.t1 AT2G27220 45.000 60 33 0 159 218 248 307 9.67e-11 61.6

Find 55 sgRNAs with CRISPR-Local

Find 318 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAACTTTCCAAACCCTTAA+AGG 0.230018 2.2:-61678698 MS.gene02168:CDS
AGCAGAAGACAGGGAATTAA+AGG 0.275275 2.2:-61675117 MS.gene02168:CDS
CATAGCTTCCTTTAAGGGTT+TGG 0.275443 2.2:+61678690 None:intergenic
AATTGTTGCCTTGCCTCTTT+TGG 0.282916 2.2:+61675014 None:intergenic
AAAAGCATAGCTTCCTTTAA+GGG 0.321776 2.2:+61678685 None:intergenic
TCTTCTTCTTCAGATAATAT+TGG 0.323037 2.2:-61678622 MS.gene02168:intron
GCAGTTGGATCAGGTTGTTT+AGG 0.376419 2.2:-61678784 MS.gene02168:CDS
ATCAGAAGCAAATAAACAAC+TGG 0.411205 2.2:-61674118 MS.gene02168:CDS
CAAGGCAACAATTGCTTGAA+TGG 0.428670 2.2:-61675004 MS.gene02168:CDS
AACCTTGCCACCACTTCACT+TGG 0.434594 2.2:+61678847 None:intergenic
TCCAGCTCTAGATCAGTTCA+TGG 0.439689 2.2:-61678755 MS.gene02168:CDS
AATTCCCTGTCTTCTGCTTG+AGG 0.446914 2.2:+61675122 None:intergenic
AGCAAGAGTTTATGAAGAAA+AGG 0.455849 2.2:-61675052 MS.gene02168:CDS
AGAAAATACAGTGGATACTT+AGG 0.456169 2.2:-61675083 MS.gene02168:CDS
TCCTCACTATCACCGTCTCT+TGG 0.481181 2.2:-61679176 MS.gene02168:CDS
TTCAGAGGACATGCAGTTTG+TGG 0.481599 2.2:-61674063 MS.gene02168:CDS
TAGATCCTCAAGCAGAAGAC+AGG 0.488640 2.2:-61675127 MS.gene02168:CDS
CTTGTAGTGAAGGTGGAGAT+AGG 0.494451 2.2:-61675196 MS.gene02168:CDS
TCAATCAAAGGAAACGGCAC+TGG 0.497928 2.2:-61674091 MS.gene02168:CDS
CTGGCTCTAGCAGAGTCAAC+AGG 0.498247 2.2:-61674146 MS.gene02168:CDS
ATGTGCAACTGCAGTGAGAA+TGG 0.501403 2.2:-61678815 MS.gene02168:CDS
GGTGGAGATGCAGTTGGATC+AGG 0.509504 2.2:-61678793 MS.gene02168:CDS
GGACATGCAGTTTGTGGTGA+TGG 0.522795 2.2:-61674057 MS.gene02168:CDS
GCAGAAGACAGGGAATTAAA+GGG 0.524288 2.2:-61675116 MS.gene02168:CDS
AGCCTACATCAACTGTCAAA+AGG 0.527463 2.2:-61679152 MS.gene02168:intron
AAAAGGAAAGCTTCCAAAAG+AGG 0.530019 2.2:-61675027 MS.gene02168:CDS
GGTTTATCAATCAAAGGAAA+CGG 0.544135 2.2:-61674097 MS.gene02168:CDS
AGTGAAGGTGGAGATAGGAA+TGG 0.544711 2.2:-61675191 MS.gene02168:CDS
ATAACAGGAATCACAGAAGC+TGG 0.544820 2.2:-61674165 MS.gene02168:intron
TCCATGAACTGATCTAGAGC+TGG 0.552608 2.2:+61678754 None:intergenic
ATGTAATAGTGTGGATGACT+TGG 0.557999 2.2:+61674032 None:intergenic
ACAACTGGTTTATCAATCAA+AGG 0.560044 2.2:-61674103 MS.gene02168:CDS
CACCAAGTGAAGTGGTGGCA+AGG 0.566973 2.2:-61678849 MS.gene02168:CDS
ATATGATCAGCTTGTAGTGA+AGG 0.580233 2.2:-61675206 MS.gene02168:intron
AAGTCATCCACACTATTACA+TGG 0.581325 2.2:-61674030 MS.gene02168:CDS
CATGGTGTTAGATAGATCCA+TGG 0.582210 2.2:+61673983 None:intergenic
TGTGCAACTGCAGTGAGAAT+GGG 0.589860 2.2:-61678814 MS.gene02168:CDS
GGTTGGAGCACCAAGTGAAG+TGG 0.591898 2.2:-61678857 MS.gene02168:CDS
TCTCAGCAATTCATATCCCA+TGG 0.592615 2.2:-61674000 MS.gene02168:CDS
ACAAACTGCATGTCCTCTGA+AGG 0.595663 2.2:+61674065 None:intergenic
TGATCAGCTTGTAGTGAAGG+TGG 0.598391 2.2:-61675203 MS.gene02168:intron
GGCAACAATTGCTTGAATGG+TGG 0.608396 2.2:-61675001 MS.gene02168:CDS
TCCAAGAGACGGTGATAGTG+AGG 0.612274 2.2:+61679175 None:intergenic
TGGAGCACCAAGTGAAGTGG+TGG 0.614555 2.2:-61678854 MS.gene02168:CDS
GAAAGCTTCCAAAAGAGGCA+AGG 0.624760 2.2:-61675022 MS.gene02168:CDS
TGATGTAGGCTTCCAAGAGA+CGG 0.625494 2.2:+61679164 None:intergenic
ACATTATCCATGTAATAGTG+TGG 0.627160 2.2:+61674023 None:intergenic
ACGGCACTGGAAGCCTTCAG+AGG 0.633606 2.2:-61674078 MS.gene02168:CDS
GTGGTGCTTACAGATGGGTA+AGG 0.637343 2.2:+61674960 None:intergenic
ATGGTGTTAGATAGATCCAT+GGG 0.639715 2.2:+61673984 None:intergenic
AGATCCTCAAGCAGAAGACA+GGG 0.640900 2.2:-61675126 MS.gene02168:CDS
CCGAGGTAATAACTAGAGCA+TGG 0.644204 2.2:+61673965 None:intergenic
AGAATGGGTGGAGATGCAGT+TGG 0.655702 2.2:-61678799 MS.gene02168:CDS
GCAACTGCAGTGAGAATGGG+TGG 0.659150 2.2:-61678811 MS.gene02168:CDS
GGTGGAGCAGACATTACAAG+TGG 0.680780 2.2:-61674983 MS.gene02168:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATAAAAAAA+AGG + chr2.2:61677535-61677554 None:intergenic 0.0%
!! ATTCTAATAATTAATAACAA+TGG - chr2.2:61676649-61676668 MS.gene02168:intron 10.0%
!! TTTGAATATATGAAAATAAA+AGG + chr2.2:61677881-61677900 None:intergenic 10.0%
!!! ACTTCAATTTAATTTAATTA+AGG + chr2.2:61674890-61674909 None:intergenic 10.0%
!! AAATAATAACCAATGAATTA+GGG - chr2.2:61675431-61675450 MS.gene02168:intron 15.0%
!! GTGAATGTTTAATTAAATAA+AGG + chr2.2:61677050-61677069 None:intergenic 15.0%
!! TAAATAATAACCAATGAATT+AGG - chr2.2:61675430-61675449 MS.gene02168:intron 15.0%
!! TAAATATAGAAATCTAACAT+TGG + chr2.2:61677565-61677584 None:intergenic 15.0%
!! TACTATAATTTATGAATAAC+AGG - chr2.2:61678981-61679000 MS.gene02168:intron 15.0%
!! TTGTCAATATTAGTAATAAA+TGG + chr2.2:61674173-61674192 None:intergenic 15.0%
!!! AAGTTTTTTTATGTTTTGAA+GGG + chr2.2:61676377-61676396 None:intergenic 15.0%
!!! TTCATAAATTTTTTACTTCA+TGG - chr2.2:61674270-61674289 MS.gene02168:intron 15.0%
!! AAACATGTATAATTGATAAG+TGG + chr2.2:61676406-61676425 None:intergenic 20.0%
!! AAACATTGAATTGAAAACTT+TGG + chr2.2:61676256-61676275 None:intergenic 20.0%
!! AATAAAATATTCCATCCATA+GGG + chr2.2:61675789-61675808 None:intergenic 20.0%
!! AATACATGTTTATATGGTTA+GGG + chr2.2:61678865-61678884 None:intergenic 20.0%
!! AGGTTAAAATATTAACAATG+TGG + chr2.2:61677515-61677534 None:intergenic 20.0%
!! ATGATATACTACAAAAATAG+AGG + chr2.2:61676301-61676320 None:intergenic 20.0%
!! ATTACTTCAAACATAATCAA+AGG + chr2.2:61676675-61676694 None:intergenic 20.0%
!! ATTTATTAAAATCCGTAACT+AGG + chr2.2:61678311-61678330 None:intergenic 20.0%
!! CAAAATACTTAACTTATGAA+GGG + chr2.2:61676802-61676821 None:intergenic 20.0%
!! CTAAGATAATCTTTCTATAT+AGG + chr2.2:61676467-61676486 None:intergenic 20.0%
!! CTATATAGAAAGATTATCTT+AGG - chr2.2:61676465-61676484 MS.gene02168:intron 20.0%
!! GCAAATAATATAACATTAGA+AGG + chr2.2:61677908-61677927 None:intergenic 20.0%
!! GTAGTACATATATATTTCAT+TGG - chr2.2:61675114-61675133 MS.gene02168:CDS 20.0%
!! TAATAAAATATTCCATCCAT+AGG + chr2.2:61675790-61675809 None:intergenic 20.0%
!! TACATAAAAGTAAACCAATA+AGG + chr2.2:61677206-61677225 None:intergenic 20.0%
!! TATTATCATAGGGATAAAAA+TGG + chr2.2:61676711-61676730 None:intergenic 20.0%
!! TCCTATAATCAAATATATGT+GGG + chr2.2:61677319-61677338 None:intergenic 20.0%
!! TCTATATCAAATGTGTAAAT+TGG - chr2.2:61678624-61678643 MS.gene02168:CDS 20.0%
!! TGATATACTACAAAAATAGA+GGG + chr2.2:61676300-61676319 None:intergenic 20.0%
!! TTGTACAATACATGTTTATA+TGG + chr2.2:61678871-61678890 None:intergenic 20.0%
!! TTTATCATCTATGCTTAAAA+GGG + chr2.2:61674225-61674244 None:intergenic 20.0%
!! TTTATGAAGAAAAGGAAAAA+AGG - chr2.2:61678117-61678136 MS.gene02168:intron 20.0%
!! TTTGCAAATTTGAAAAATCA+TGG + chr2.2:61678476-61678495 None:intergenic 20.0%
!! TTTGTAATGAATCCAAAATT+TGG - chr2.2:61675364-61675383 MS.gene02168:intron 20.0%
!!! AAAATCTGAATAGTATTTTC+TGG + chr2.2:61674605-61674624 None:intergenic 20.0%
!!! AAGACATTGTTTCTTTTTTT+GGG + chr2.2:61674798-61674817 None:intergenic 20.0%
!!! AAGGATTCAAATTTTTAAAG+TGG + chr2.2:61678223-61678242 None:intergenic 20.0%
!!! AATTAAAAATAGGAGTACAA+GGG - chr2.2:61677245-61677264 MS.gene02168:intron 20.0%
!!! ATTTGAAGACTGATTTTTTA+AGG - chr2.2:61678552-61678571 MS.gene02168:intron 20.0%
!!! ATTTTAATGTTCTGTTTATG+AGG - chr2.2:61677584-61677603 MS.gene02168:intron 20.0%
!!! CAAGTTTTTTTATGTTTTGA+AGG + chr2.2:61676378-61676397 None:intergenic 20.0%
!!! CTTGATAGTATTGTTTTTAT+GGG - chr2.2:61675210-61675229 MS.gene02168:intron 20.0%
!!! GATCGATTTTCTTTATAAAA+TGG + chr2.2:61676534-61676553 None:intergenic 20.0%
!!! GTACAATTTACTTTTTTTGA+AGG - chr2.2:61678885-61678904 MS.gene02168:intron 20.0%
!!! TACTTCATGGAAATTATTTT+AGG - chr2.2:61674283-61674302 MS.gene02168:intron 20.0%
!!! TGACTATAAATTGTTTTTAC+CGG - chr2.2:61677713-61677732 MS.gene02168:intron 20.0%
!!! TTACTACTATATACTTCTTT+TGG + chr2.2:61676217-61676236 None:intergenic 20.0%
!!! TTTGATTTCTTTCATTTCAT+AGG - chr2.2:61678279-61678298 MS.gene02168:intron 20.0%
! AAATGCATAGCTTAACTAAA+TGG + chr2.2:61676578-61676597 None:intergenic 25.0%
! AAATGTCATAACATAGAACT+TGG - chr2.2:61677783-61677802 MS.gene02168:intron 25.0%
! AAGCTAAGCTACTAAATTAT+TGG + chr2.2:61677099-61677118 None:intergenic 25.0%
! AATAATTTAGTAGCTTAGCT+TGG - chr2.2:61677098-61677117 MS.gene02168:intron 25.0%
! ACCATGGATATTTGTATATA+TGG + chr2.2:61677463-61677482 None:intergenic 25.0%
! AGTGGAAATCTATTATCATA+GGG + chr2.2:61676721-61676740 None:intergenic 25.0%
! ATATTTGATTATAGGACCTA+AGG - chr2.2:61677323-61677342 MS.gene02168:intron 25.0%
! ATGGATATTTGTATATATGG+GGG + chr2.2:61677460-61677479 None:intergenic 25.0%
! ATTACTTACACATGAATAGA+AGG + chr2.2:61677628-61677647 None:intergenic 25.0%
! CAAATGTGTAAATTGGATTT+GGG - chr2.2:61678631-61678650 MS.gene02168:CDS 25.0%
! CAATACATGTTTATATGGTT+AGG + chr2.2:61678866-61678885 None:intergenic 25.0%
! CATATATATTTCATTGGTGT+TGG - chr2.2:61675120-61675139 MS.gene02168:CDS 25.0%
! CATGGATATTTGTATATATG+GGG + chr2.2:61677461-61677480 None:intergenic 25.0%
! CCAAAATACTTAACTTATGA+AGG + chr2.2:61676803-61676822 None:intergenic 25.0%
! CCATGGATATTTGTATATAT+GGG + chr2.2:61677462-61677481 None:intergenic 25.0%
! CCTATAATCAAATATATGTG+GGG + chr2.2:61677318-61677337 None:intergenic 25.0%
! CTATAATCAAATATATGTGG+GGG + chr2.2:61677317-61677336 None:intergenic 25.0%
! CTTTATCATCTATGCTTAAA+AGG + chr2.2:61674226-61674245 None:intergenic 25.0%
! GAAGAGTTCCAATTAAAAAT+AGG - chr2.2:61677235-61677254 MS.gene02168:intron 25.0%
! GATATACTACAAAAATAGAG+GGG + chr2.2:61676299-61676318 None:intergenic 25.0%
! GTCCTATAATCAAATATATG+TGG + chr2.2:61677320-61677339 None:intergenic 25.0%
! TAAACTCACCATTATTCTTA+AGG + chr2.2:61675703-61675722 None:intergenic 25.0%
! TAACTAAATCCAAGTTTGTA+AGG - chr2.2:61676497-61676516 MS.gene02168:intron 25.0%
! TATAATCAAATATATGTGGG+GGG + chr2.2:61677316-61677335 None:intergenic 25.0%
! TCAAATACTAAATGCATGTT+CGG + chr2.2:61678538-61678557 None:intergenic 25.0%
! TCAAATGTGTAAATTGGATT+TGG - chr2.2:61678630-61678649 MS.gene02168:CDS 25.0%
! TCACAAGTTTCTTTCTAAAT+TGG - chr2.2:61675500-61675519 MS.gene02168:intron 25.0%
! TCTTCTTCTTCAGATAATAT+TGG - chr2.2:61674539-61674558 MS.gene02168:intron 25.0%
! TGCTTGTCTTTAACTAAAAA+TGG - chr2.2:61675960-61675979 MS.gene02168:intron 25.0%
! TTGAAGGAACTTAACTATAT+AGG - chr2.2:61675147-61675166 MS.gene02168:CDS 25.0%
!! AAAAATCTTGCAAAGTTGAT+TGG - chr2.2:61675627-61675646 MS.gene02168:intron 25.0%
!! AAACTGTAAGATTTTTGAAC+TGG + chr2.2:61674520-61674539 None:intergenic 25.0%
!! AAGCTACTAAATTATTGGTT+AGG + chr2.2:61677094-61677113 None:intergenic 25.0%
!! ACTATGTTTGTTAACCTTAT+TGG - chr2.2:61677189-61677208 MS.gene02168:intron 25.0%
!! AGAAAGATTATCTTAGGTTT+TGG - chr2.2:61676471-61676490 MS.gene02168:intron 25.0%
!! AGTTGTTTGCATTAATTTGA+AGG - chr2.2:61678585-61678604 MS.gene02168:intron 25.0%
!! ATCAAAATGGTTAGGATTTT+TGG + chr2.2:61677486-61677505 None:intergenic 25.0%
!! ATTAAAAATAGGAGTACAAG+GGG - chr2.2:61677246-61677265 MS.gene02168:intron 25.0%
!! CAATTAAAAATAGGAGTACA+AGG - chr2.2:61677244-61677263 MS.gene02168:intron 25.0%
!! CCTTCATAAGTTAAGTATTT+TGG - chr2.2:61676800-61676819 MS.gene02168:intron 25.0%
!! GCATTTTTGTCTGAAAATAA+AGG - chr2.2:61675075-61675094 MS.gene02168:CDS 25.0%
!! GTGGATTTTAGATTATGATA+TGG - chr2.2:61675589-61675608 MS.gene02168:intron 25.0%
!! TATTTGGAACTCACTTATTT+AGG + chr2.2:61675027-61675046 None:intergenic 25.0%
!! TCAAAATCTGCATTGATATT+TGG - chr2.2:61678757-61678776 MS.gene02168:CDS 25.0%
!! TTAAAATTTCCCTTTTGATG+AGG - chr2.2:61675271-61675290 MS.gene02168:intron 25.0%
!! TTAAGCTATGCATTTTTCTT+CGG - chr2.2:61676583-61676602 MS.gene02168:intron 25.0%
!! TTTAACTTTGTCTTCTTTGA+AGG - chr2.2:61676859-61676878 MS.gene02168:intron 25.0%
!! TTTTCTATGATGTTCATTGT+TGG - chr2.2:61676005-61676024 MS.gene02168:intron 25.0%
!!! ATAATTGTACTTTGAAACTG+TGG - chr2.2:61674131-61674150 MS.gene02168:CDS 25.0%
!!! CAAGACATTGTTTCTTTTTT+TGG + chr2.2:61674799-61674818 None:intergenic 25.0%
!!! CATAGCTTAATCTCTTTTTT+AGG + chr2.2:61675666-61675685 None:intergenic 25.0%
!!! CTTGTACTCCTATTTTTAAT+TGG + chr2.2:61677246-61677265 None:intergenic 25.0%
!!! CTTTTTTTGTTTGACAAGTT+TGG - chr2.2:61674089-61674108 MS.gene02168:CDS 25.0%
!!! GCTTGATAGTATTGTTTTTA+TGG - chr2.2:61675209-61675228 MS.gene02168:intron 25.0%
!!! TAATTGTACTTTGAAACTGT+GGG - chr2.2:61674132-61674151 MS.gene02168:CDS 25.0%
!!! TCATGGAAATTATTTTAGGT+TGG - chr2.2:61674287-61674306 MS.gene02168:intron 25.0%
AACCTTATCACATAATGCAT+TGG - chr2.2:61676131-61676150 MS.gene02168:intron 30.0%
AATGTGGAGTGAAATCAAAA+TGG + chr2.2:61677499-61677518 None:intergenic 30.0%
AATGTTCTGTTTATGAGGAT+TGG - chr2.2:61677589-61677608 MS.gene02168:intron 30.0%
ACAGTGTAATCTTAATGAGA+AGG + chr2.2:61676625-61676644 None:intergenic 30.0%
ACATTATCCATGTAATAGTG+TGG + chr2.2:61679141-61679160 None:intergenic 30.0%
AGAAAATACAGTGGATACTT+AGG - chr2.2:61678078-61678097 MS.gene02168:intron 30.0%
AGACAAAAATGCATGAGTTA+AGG + chr2.2:61675067-61675086 None:intergenic 30.0%
AGCAAGAGTTTATGAAGAAA+AGG - chr2.2:61678109-61678128 MS.gene02168:intron 30.0%
AGCTAGTTGAAATAGTATCA+TGG - chr2.2:61677150-61677169 MS.gene02168:intron 30.0%
ATCAGAAGCAAATAAACAAC+TGG - chr2.2:61679043-61679062 MS.gene02168:intron 30.0%
ATCCAATGCATTATGTGATA+AGG + chr2.2:61676136-61676155 None:intergenic 30.0%
CAGTGGAAATCTATTATCAT+AGG + chr2.2:61676722-61676741 None:intergenic 30.0%
CATCATAGAAAAATGCATGT+AGG + chr2.2:61675997-61676016 None:intergenic 30.0%
CCCATATATACAAATATCCA+TGG - chr2.2:61677459-61677478 MS.gene02168:intron 30.0%
CCCCACATATATTTGATTAT+AGG - chr2.2:61677315-61677334 MS.gene02168:intron 30.0%
CTATGATAATAGATTTCCAC+TGG - chr2.2:61676720-61676739 MS.gene02168:intron 30.0%
GAAAACTTTGGATCAATATG+TGG + chr2.2:61676244-61676263 None:intergenic 30.0%
GACAAAAATGCATGAGTTAA+GGG + chr2.2:61675066-61675085 None:intergenic 30.0%
GCAAATTTGAAAAATCATGG+TGG + chr2.2:61678473-61678492 None:intergenic 30.0%
GGTTTATCAATCAAAGGAAA+CGG - chr2.2:61679064-61679083 MS.gene02168:intron 30.0%
GTAATGAATCCAAAATTTGG+AGG - chr2.2:61675367-61675386 MS.gene02168:intron 30.0%
TAAGACAGTACATTACTACA+AGG + chr2.2:61676354-61676373 None:intergenic 30.0%
TAATTAAACATTCACCCTTG+TGG - chr2.2:61677055-61677074 MS.gene02168:intron 30.0%
TAATTTGGCATTCAGTTACT+TGG + chr2.2:61677411-61677430 None:intergenic 30.0%
TAGTAGGTCCTTAAGAATAA+TGG - chr2.2:61675692-61675711 MS.gene02168:intron 30.0%
TCAAATGTTAACCTTCAATG+TGG - chr2.2:61676984-61677003 MS.gene02168:intron 30.0%
TCAATGATACACTAAAAGCT+TGG + chr2.2:61676169-61676188 None:intergenic 30.0%
TGAAGGTTAACATTTGAACT+AGG + chr2.2:61676981-61677000 None:intergenic 30.0%
TGTCTGAAAATAAAGGTAGA+TGG - chr2.2:61675082-61675101 MS.gene02168:CDS 30.0%
TTAAGCTATGATGTGTTAGT+AGG - chr2.2:61675676-61675695 MS.gene02168:intron 30.0%
TTATTGCAAAAGCTACACAT+TGG + chr2.2:61678433-61678452 None:intergenic 30.0%
TTCCAAATACTTGAAACCAA+AGG - chr2.2:61675038-61675057 MS.gene02168:CDS 30.0%
TTGGAGCTACAAAAAAATCA+CGG + chr2.2:61678414-61678433 None:intergenic 30.0%
TTGGATCAAAATAAGACGAT+TGG - chr2.2:61678701-61678720 MS.gene02168:CDS 30.0%
! AAAAAGCATAGCTTCCTTTA+AGG + chr2.2:61674480-61674499 None:intergenic 30.0%
! AAAAGCATAGCTTCCTTTAA+GGG + chr2.2:61674479-61674498 None:intergenic 30.0%
! ACAACTGGTTTATCAATCAA+AGG - chr2.2:61679058-61679077 MS.gene02168:intron 30.0%
! ATCCAAGTTTGTAAGGTTTT+CGG - chr2.2:61676504-61676523 MS.gene02168:intron 30.0%
! GGAATCAACTTTTTGCAAAT+CGG - chr2.2:61677804-61677823 MS.gene02168:intron 30.0%
! TGTTTATATGGTTAGGGTTT+TGG + chr2.2:61678859-61678878 None:intergenic 30.0%
! TTTGTCTTCTTTGAAGGAAA+AGG - chr2.2:61676865-61676884 MS.gene02168:intron 30.0%
! TTTTCTCATTTGTCTCATCA+AGG - chr2.2:61675745-61675764 MS.gene02168:intron 30.0%
!! AGTGATTTGCTAAAATTGTG+TGG - chr2.2:61678385-61678404 MS.gene02168:intron 30.0%
!! ATGTATATTTTTGTGTCTGC+AGG - chr2.2:61675859-61675878 MS.gene02168:intron 30.0%
!! GACAAATTTTGATACCACAA+GGG + chr2.2:61677072-61677091 None:intergenic 30.0%
!!! AAGCTATGCTTTTTCTTCAA+AGG - chr2.2:61674486-61674505 MS.gene02168:intron 30.0%
!!! TATTTTGATCCAATGACCTT+TGG + chr2.2:61678694-61678713 None:intergenic 30.0%
AAAAGGAAAGCTTCCAAAAG+AGG - chr2.2:61678134-61678153 MS.gene02168:intron 35.0%
AACATTTGAACTAGGTGCAT+AGG + chr2.2:61676973-61676992 None:intergenic 35.0%
AAGTCATCCACACTATTACA+TGG - chr2.2:61679131-61679150 MS.gene02168:intron 35.0%
ACTCATCCATATACAACCAA+GGG - chr2.2:61677270-61677289 MS.gene02168:intron 35.0%
AGAACTTTCCAAACCCTTAA+AGG - chr2.2:61674463-61674482 MS.gene02168:intron 35.0%
ATATGATCAGCTTGTAGTGA+AGG - chr2.2:61677955-61677974 MS.gene02168:intron 35.0%
ATCCAAAATTTGGAGGACTT+CGG - chr2.2:61675374-61675393 MS.gene02168:intron 35.0%
ATGTAATAGTGTGGATGACT+TGG + chr2.2:61679132-61679151 None:intergenic 35.0%
CAGAAGAAACCCTAATTCAT+TGG + chr2.2:61675443-61675462 None:intergenic 35.0%
CCAACAACAATAATTGCTAC+CGG + chr2.2:61677735-61677754 None:intergenic 35.0%
CTAAACACCACTCAAAGAAA+AGG - chr2.2:61677362-61677381 MS.gene02168:intron 35.0%
CTACACATCCATTATTTCCA+AGG + chr2.2:61676925-61676944 None:intergenic 35.0%
GCATCTAAACCCTGAAATAA+TGG + chr2.2:61676896-61676915 None:intergenic 35.0%
GCTGAAACTAGCATATATGT+TGG + chr2.2:61677133-61677152 None:intergenic 35.0%
GGAGTGAAATCAAAATGGTT+AGG + chr2.2:61677494-61677513 None:intergenic 35.0%
GTCATATGAATTGCATCCTT+AGG + chr2.2:61677342-61677361 None:intergenic 35.0%
GTGGCAAGAGATTAAGAAAA+AGG + chr2.2:61678242-61678261 None:intergenic 35.0%
TACTCATCCATATACAACCA+AGG - chr2.2:61677269-61677288 MS.gene02168:intron 35.0%
TATTTCAGGGTTTAGATGCA+TGG - chr2.2:61676897-61676916 MS.gene02168:intron 35.0%
TGGTGCTTATCAAAAAACTG+TGG - chr2.2:61676025-61676044 MS.gene02168:intron 35.0%
TGTAGTATATCATCGTATGC+TGG - chr2.2:61676308-61676327 MS.gene02168:intron 35.0%
TTAAAGTGGTGCTTACAGAT+GGG + chr2.2:61678209-61678228 None:intergenic 35.0%
TTTCTGTGACCTCATCAAAA+GGG + chr2.2:61675283-61675302 None:intergenic 35.0%
! AAAGAGGTAAAGTACTTTCC+TGG - chr2.2:61675553-61675572 MS.gene02168:intron 35.0%
! AAGAGGTAAAGTACTTTCCT+GGG - chr2.2:61675554-61675573 MS.gene02168:intron 35.0%
! ATGGTGTTAGATAGATCCAT+GGG + chr2.2:61679180-61679199 None:intergenic 35.0%
! CACCTTTGGTTTCAAGTATT+TGG + chr2.2:61675043-61675062 None:intergenic 35.0%
! CGGTAGCAATTATTGTTGTT+GGG - chr2.2:61677733-61677752 MS.gene02168:intron 35.0%
! CTTTTCTTTGAGTGGTGTTT+AGG + chr2.2:61677364-61677383 None:intergenic 35.0%
! TATGCATTTTTCTTCGGCTT+TGG - chr2.2:61676589-61676608 MS.gene02168:intron 35.0%
! TCCAAGTTTGTAAGGTTTTC+GGG - chr2.2:61676505-61676524 MS.gene02168:intron 35.0%
! TCTAGCTTCCAACTATGTAT+GGG - chr2.2:61676191-61676210 MS.gene02168:intron 35.0%
! TTTAAAGTGGTGCTTACAGA+TGG + chr2.2:61678210-61678229 None:intergenic 35.0%
!! AAAGGAGTGTCCATTATTTC+AGG - chr2.2:61676883-61676902 MS.gene02168:intron 35.0%
!! AAGGAGTGTCCATTATTTCA+GGG - chr2.2:61676884-61676903 MS.gene02168:intron 35.0%
!! AGGAAAGTACTTTACCTCTT+TGG + chr2.2:61675554-61675573 None:intergenic 35.0%
!! CAGCTTTTGAGAAAATACAG+TGG - chr2.2:61678069-61678088 MS.gene02168:intron 35.0%
!! GGACAAATTTTGATACCACA+AGG + chr2.2:61677073-61677092 None:intergenic 35.0%
!! GTTACTTGGAAGGTATTTCA+TGG + chr2.2:61677397-61677416 None:intergenic 35.0%
!! TCATTGATTCACCACATTGA+AGG + chr2.2:61676998-61677017 None:intergenic 35.0%
!! TTCTAGCTTCCAACTATGTA+TGG - chr2.2:61676190-61676209 MS.gene02168:intron 35.0%
!! TTGAAAAATCATGGTGGACT+TGG + chr2.2:61678467-61678486 None:intergenic 35.0%
!!! TGGTTTTGATTTCTGCATCT+AGG - chr2.2:61676740-61676759 MS.gene02168:intron 35.0%
AAATGCTAACAAGTGCCCTA+AGG + chr2.2:61674866-61674885 None:intergenic 40.0%
AAGGGCAAGCTAATTACAAG+GGG - chr2.2:61677288-61677307 MS.gene02168:intron 40.0%
AATGCTAACAAGTGCCCTAA+GGG + chr2.2:61674865-61674884 None:intergenic 40.0%
ACCCGAAAACCTTACAAACT+TGG + chr2.2:61676509-61676528 None:intergenic 40.0%
ACCTTTCGATCTTGATCCAA+CGG - chr2.2:61678780-61678799 MS.gene02168:CDS 40.0%
AGCAGAAGACAGGGAATTAA+AGG - chr2.2:61678044-61678063 MS.gene02168:intron 40.0%
AGCCTACATCAACTGTCAAA+AGG - chr2.2:61674009-61674028 MS.gene02168:CDS 40.0%
ATAACAGGAATCACAGAAGC+TGG - chr2.2:61678996-61679015 MS.gene02168:intron 40.0%
ATAACCGTACAATGCCCTTA+GGG - chr2.2:61674848-61674867 MS.gene02168:intron 40.0%
ATAGTAGAGTAGCTCCAAAG+AGG - chr2.2:61675537-61675556 MS.gene02168:intron 40.0%
CAAGGCAACAATTGCTTGAA+TGG - chr2.2:61678157-61678176 MS.gene02168:intron 40.0%
CAAGGGCAAGCTAATTACAA+GGG - chr2.2:61677287-61677306 MS.gene02168:intron 40.0%
CACATGAATAGAAGGCAAGT+TGG + chr2.2:61677620-61677639 None:intergenic 40.0%
CAGAAACTCTCAGATTTCAC+TGG - chr2.2:61675297-61675316 MS.gene02168:intron 40.0%
CATAGGCAATCACCTAGTTA+CGG - chr2.2:61678296-61678315 MS.gene02168:intron 40.0%
CATAGGGAGTAGTGTTTACA+CGG + chr2.2:61675773-61675792 None:intergenic 40.0%
CCGGTAGCAATTATTGTTGT+TGG - chr2.2:61677732-61677751 MS.gene02168:intron 40.0%
CTTGTTAACAAGTGCCCTAA+GGG - chr2.2:61674757-61674776 MS.gene02168:intron 40.0%
GAGAGGGATTGTCACTAATT+TGG + chr2.2:61677426-61677445 None:intergenic 40.0%
GATGCAGAAATCAAAACCAG+TGG + chr2.2:61676739-61676758 None:intergenic 40.0%
GCAGAAGACAGGGAATTAAA+GGG - chr2.2:61678045-61678064 MS.gene02168:intron 40.0%
GTTTCTGTGACCTCATCAAA+AGG + chr2.2:61675284-61675303 None:intergenic 40.0%
TAAACACTACTCCCTATGGA+TGG - chr2.2:61675775-61675794 MS.gene02168:intron 40.0%
TAGCGTGACTTGAAAAACCA+TGG + chr2.2:61678513-61678532 None:intergenic 40.0%
TATCCATGCATGTCTGTGTT+TGG - chr2.2:61674674-61674693 MS.gene02168:intron 40.0%
TCCTTAAACAATGCCCCTTA+GGG + chr2.2:61674774-61674793 None:intergenic 40.0%
TCTCAGCAATTCATATCCCA+TGG - chr2.2:61679161-61679180 MS.gene02168:CDS 40.0%
TGACAACTCATGTTTCGACT+TGG - chr2.2:61678344-61678363 MS.gene02168:intron 40.0%
TGATCCAACGGTCAATAATG+TGG - chr2.2:61678792-61678811 MS.gene02168:CDS 40.0%
TGCAAATCGGATTGAAGAGT+AGG - chr2.2:61677817-61677836 MS.gene02168:intron 40.0%
TGGTGAAGTATACATTCACG+AGG - chr2.2:61676820-61676839 MS.gene02168:intron 40.0%
TTCCTTAAACAATGCCCCTT+AGG + chr2.2:61674775-61674794 None:intergenic 40.0%
TTGACCACATTATTGACCGT+TGG + chr2.2:61678799-61678818 None:intergenic 40.0%
TTGGCATTCAGTTACTTGGA+AGG + chr2.2:61677407-61677426 None:intergenic 40.0%
TTGTTAACAAGTGCCCTAAG+GGG - chr2.2:61674758-61674777 MS.gene02168:intron 40.0%
! AATTGTTGCCTTGCCTCTTT+TGG + chr2.2:61678150-61678169 None:intergenic 40.0%
! ACTTGTTAACAAGTGCCCTA+AGG - chr2.2:61674756-61674775 MS.gene02168:intron 40.0%
! AGAGGTAAAGTACTTTCCTG+GGG - chr2.2:61675555-61675574 MS.gene02168:intron 40.0%
! CATAGCTTCCTTTAAGGGTT+TGG + chr2.2:61674474-61674493 None:intergenic 40.0%
! CATGGTGTTAGATAGATCCA+TGG + chr2.2:61679181-61679200 None:intergenic 40.0%
! GAAGATTGGTGGGTGAATTT+AGG - chr2.2:61675402-61675421 MS.gene02168:intron 40.0%
! GCAATAGCCTTTTCTTTGAG+TGG + chr2.2:61677372-61677391 None:intergenic 40.0%
! TCTTTTGGCCCATACATAGT+TGG + chr2.2:61676202-61676221 None:intergenic 40.0%
! TTCCGAAGTCCTCCAAATTT+TGG + chr2.2:61675379-61675398 None:intergenic 40.0%
!! ACTTGGAAGGTATTTCATGG+AGG + chr2.2:61677394-61677413 None:intergenic 40.0%
!! GACCTTTTGACAGTTGATGT+AGG + chr2.2:61674014-61674033 None:intergenic 40.0%
!! TGGTTAGGATTTTTGGACCA+TGG + chr2.2:61677479-61677498 None:intergenic 40.0%
AAAGTCACGTTGAACCACCA+TGG - chr2.2:61678493-61678512 MS.gene02168:intron 45.0%
AATTCCCTGTCTTCTGCTTG+AGG + chr2.2:61678042-61678061 None:intergenic 45.0%
AATTTGGAGGACTTCGGAAC+AGG - chr2.2:61675380-61675399 MS.gene02168:intron 45.0%
ACAAACTGCATGTCCTCTGA+AGG + chr2.2:61679099-61679118 None:intergenic 45.0%
ACCGTTGGATCAAGATCGAA+AGG + chr2.2:61678784-61678803 None:intergenic 45.0%
ACCTCGCAATTACCACTTCT+GGG + chr2.2:61675474-61675493 None:intergenic 45.0%
ACTAGGGTCTCTTGTGTGTA+TGG - chr2.2:61676767-61676786 MS.gene02168:intron 45.0%
AGATCCTCAAGCAGAAGACA+GGG - chr2.2:61678035-61678054 MS.gene02168:intron 45.0%
AGCTTGCCCTTGGTTGTATA+TGG + chr2.2:61677279-61677298 None:intergenic 45.0%
AGGTGCATAGGATAAAGAGC+CGG + chr2.2:61676961-61676980 None:intergenic 45.0%
AGTGAAGGTGGAGATAGGAA+TGG - chr2.2:61677970-61677989 MS.gene02168:intron 45.0%
ATGTGCAACTGCAGTGAGAA+TGG - chr2.2:61674346-61674365 MS.gene02168:intron 45.0%
CATAACCGTACAATGCCCTT+AGG - chr2.2:61674847-61674866 MS.gene02168:intron 45.0%
CCAAGGGCAAGCTAATTACA+AGG - chr2.2:61677286-61677305 MS.gene02168:intron 45.0%
CGGATTGAAGAGTAGGTCTT+GGG - chr2.2:61677824-61677843 MS.gene02168:intron 45.0%
CGTGACTTGAAAAACCATGG+TGG + chr2.2:61678510-61678529 None:intergenic 45.0%
CGTGTAAACACTACTCCCTA+TGG - chr2.2:61675771-61675790 MS.gene02168:intron 45.0%
CTTCCAAACACAGACATGCA+TGG + chr2.2:61674680-61674699 None:intergenic 45.0%
CTTGTAGTGAAGGTGGAGAT+AGG - chr2.2:61677965-61677984 MS.gene02168:intron 45.0%
GAAAGCTTCCAAAAGAGGCA+AGG - chr2.2:61678139-61678158 MS.gene02168:intron 45.0%
GCATGGAGCCTTGGAAATAA+TGG - chr2.2:61676914-61676933 MS.gene02168:intron 45.0%
GGCAACAATTGCTTGAATGG+TGG - chr2.2:61678160-61678179 MS.gene02168:intron 45.0%
GTGTAGATAATGTGCCTTCC+CGG - chr2.2:61676939-61676958 MS.gene02168:intron 45.0%
TACCTCGCAATTACCACTTC+TGG + chr2.2:61675475-61675494 None:intergenic 45.0%
TAGATCCTCAAGCAGAAGAC+AGG - chr2.2:61678034-61678053 MS.gene02168:intron 45.0%
TCAATCAAAGGAAACGGCAC+TGG - chr2.2:61679070-61679089 MS.gene02168:intron 45.0%
TCGGATTGAAGAGTAGGTCT+TGG - chr2.2:61677823-61677842 MS.gene02168:intron 45.0%
TCTGCATCTAGGCTTGACTA+GGG - chr2.2:61676751-61676770 MS.gene02168:intron 45.0%
TGATCAGCTTGTAGTGAAGG+TGG - chr2.2:61677958-61677977 MS.gene02168:intron 45.0%
TGATCCAATGACCTTTGGTG+TGG + chr2.2:61678689-61678708 None:intergenic 45.0%
TGATGTAGGCTTCCAAGAGA+CGG + chr2.2:61674000-61674019 None:intergenic 45.0%
TGTGCAACTGCAGTGAGAAT+GGG - chr2.2:61674347-61674366 MS.gene02168:intron 45.0%
TTCAGAGGACATGCAGTTTG+TGG - chr2.2:61679098-61679117 MS.gene02168:intron 45.0%
TTCGGAACAGGAAGATTGGT+GGG - chr2.2:61675392-61675411 MS.gene02168:intron 45.0%
TTCTGCATCTAGGCTTGACT+AGG - chr2.2:61676750-61676769 MS.gene02168:intron 45.0%
! GCAGTTGGATCAGGTTGTTT+AGG - chr2.2:61674377-61674396 MS.gene02168:intron 45.0%
! TCCATGAACTGATCTAGAGC+TGG + chr2.2:61674410-61674429 None:intergenic 45.0%
! TTTGTATATATGGGGGCGCA+AGG + chr2.2:61677453-61677472 None:intergenic 45.0%
!! CATTGGTGTTGGTGCATTGA+AGG - chr2.2:61675131-61675150 MS.gene02168:CDS 45.0%
!! CCTTGTAATTAGCTTGCCCT+TGG + chr2.2:61677289-61677308 None:intergenic 45.0%
!! GTTTCGACTTGGTGCATGTT+TGG - chr2.2:61678355-61678374 MS.gene02168:intron 45.0%
!! TCCAGCTCTAGATCAGTTCA+TGG - chr2.2:61674406-61674425 MS.gene02168:intron 45.0%
!! TTGATTATTAATTAATTAAA+GGG - chr2.2:61674732-61674751 MS.gene02168:intron 5.0%
!! TTTGATTATTAATTAATTAA+AGG - chr2.2:61674731-61674750 MS.gene02168:intron 5.0%
AACCTTGCCACCACTTCACT+TGG + chr2.2:61674317-61674336 None:intergenic 50.0%
AGAATGGGTGGAGATGCAGT+TGG - chr2.2:61674362-61674381 MS.gene02168:intron 50.0%
CACACCACACCAAAGGTCAT+TGG - chr2.2:61678682-61678701 MS.gene02168:CDS 50.0%
CATAGGATAAAGAGCCGGGA+AGG + chr2.2:61676956-61676975 None:intergenic 50.0%
CTTCGGAACAGGAAGATTGG+TGG - chr2.2:61675391-61675410 MS.gene02168:intron 50.0%
GGACATGCAGTTTGTGGTGA+TGG - chr2.2:61679104-61679123 MS.gene02168:intron 50.0%
GGACTTCGGAACAGGAAGAT+TGG - chr2.2:61675388-61675407 MS.gene02168:intron 50.0%
GGTGCATAGGATAAAGAGCC+GGG + chr2.2:61676960-61676979 None:intergenic 50.0%
GGTGGAGCAGACATTACAAG+TGG - chr2.2:61678178-61678197 MS.gene02168:intron 50.0%
GGTTTAGATGCATGGAGCCT+TGG - chr2.2:61676905-61676924 MS.gene02168:intron 50.0%
GTGGTGCTTACAGATGGGTA+AGG + chr2.2:61678204-61678223 None:intergenic 50.0%
TCCCAGAAGTGGTAATTGCG+AGG - chr2.2:61675470-61675489 MS.gene02168:intron 50.0%
TCCTCACTATCACCGTCTCT+TGG - chr2.2:61673985-61674004 MS.gene02168:CDS 50.0%
TCTGCACTTGTTCCCAGAAG+TGG - chr2.2:61675459-61675478 MS.gene02168:intron 50.0%
! TCCAAGAGACGGTGATAGTG+AGG + chr2.2:61673989-61674008 None:intergenic 50.0%
! TTTGGTGTGGTGTGACTGCA+CGG + chr2.2:61678676-61678695 None:intergenic 50.0%
!! AGTGCCCTAAGGGCATTGTA+CGG + chr2.2:61674855-61674874 None:intergenic 50.0%
!! GCATGAGTTAAGGGCACCTT+TGG + chr2.2:61675057-61675076 None:intergenic 50.0%
!! GCCCTAAGGGGCATTGTTTA+AGG - chr2.2:61674770-61674789 MS.gene02168:intron 50.0%
CACCAAGTGAAGTGGTGGCA+AGG - chr2.2:61674312-61674331 MS.gene02168:intron 55.0%
GCAACTGCAGTGAGAATGGG+TGG - chr2.2:61674350-61674369 MS.gene02168:intron 55.0%
GGTGGAGATGCAGTTGGATC+AGG - chr2.2:61674368-61674387 MS.gene02168:intron 55.0%
GTGCAGTCACACCACACCAA+AGG - chr2.2:61678675-61678694 MS.gene02168:CDS 55.0%
TCCACTATGCACTTGTCCCC+AGG + chr2.2:61675574-61675593 None:intergenic 55.0%
TCCTGGGGACAAGTGCATAG+TGG - chr2.2:61675570-61675589 MS.gene02168:intron 55.0%
! GGTTGGAGCACCAAGTGAAG+TGG - chr2.2:61674304-61674323 MS.gene02168:intron 55.0%
! TGGAGCACCAAGTGAAGTGG+TGG - chr2.2:61674307-61674326 MS.gene02168:intron 55.0%
!! CTGGCTCTAGCAGAGTCAAC+AGG - chr2.2:61679015-61679034 MS.gene02168:intron 55.0%
! ACGGCACTGGAAGCCTTCAG+AGG - chr2.2:61679083-61679102 MS.gene02168:intron 60.0%
! GGGGGCGCAAGGAAAAGAGA+GGG + chr2.2:61677442-61677461 None:intergenic 60.0%
! TGGGGGCGCAAGGAAAAGAG+AGG + chr2.2:61677443-61677462 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 61673977 61679206 61673977 ID=MS.gene02168
chr2.2 mRNA 61673977 61679206 61673977 ID=MS.gene02168.t1;Parent=MS.gene02168
chr2.2 exon 61679153 61679206 61679153 ID=MS.gene02168.t1.exon1;Parent=MS.gene02168.t1
chr2.2 CDS 61679153 61679206 61679153 ID=cds.MS.gene02168.t1;Parent=MS.gene02168.t1
chr2.2 exon 61678623 61678878 61678623 ID=MS.gene02168.t1.exon2;Parent=MS.gene02168.t1
chr2.2 CDS 61678623 61678878 61678623 ID=cds.MS.gene02168.t1;Parent=MS.gene02168.t1
chr2.2 exon 61674971 61675218 61674971 ID=MS.gene02168.t1.exon3;Parent=MS.gene02168.t1
chr2.2 CDS 61674971 61675218 61674971 ID=cds.MS.gene02168.t1;Parent=MS.gene02168.t1
chr2.2 exon 61673977 61674180 61673977 ID=MS.gene02168.t1.exon4;Parent=MS.gene02168.t1
chr2.2 CDS 61673977 61674180 61673977 ID=cds.MS.gene02168.t1;Parent=MS.gene02168.t1
Gene Sequence

>MS.gene02168

ATGGCTCATCCTCACTATCACCGTCTCTTGGAAGCCTACATCAACTGTCAAAAGGTCAGAAAAAAAAAAGATAATTATTTTGAAAACGATGTGTGTAATTAATTTCTTTGTACTTTTTTTGTTTGACAAGTTTGGATCTGACGAGCTGTGTTGTATAATTGTACTTTGAAACTGTGGGCTTTTGTTTTCATTTCCATTTATTACTAATATTGACAAACTATCATGTATATTATTGTAAGTCAAAACCCTTTTAAGCATAGATGATAAAGACACTTCATTTCATGACTATTTTTTTCATAAATTTTTTACTTCATGGAAATTATTTTAGGTTGGAGCACCAAGTGAAGTGGTGGCAAGGTTAGAAGAAGCATGTGCAACTGCAGTGAGAATGGGTGGAGATGCAGTTGGATCAGGTTGTTTAGGTGAAGATCCAGCTCTAGATCAGTTCATGGAAGCTTACTGTGAGATGCTTATCAAGTATGAGCAAGAACTTTCCAAACCCTTAAAGGAAGCTATGCTTTTTCTTCAAAGGATTGAAGTCCAGTTCAAAAATCTTACAGTTTCTTCTTCTTCAGATAATATTGGTGATAATAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCAGAAAATACTATTCAGATTTTAAATCATAATCTTGATTGCTTGCTTGATATTTGTTGCTGTTTACATATGTATCCATGCATGTCTGTGTTTGGAAGAGTTTGTTAATTTTGTTAGTATGTAAAAGTGTTTGATTATTAATTAATTAAAGGGCACTTGTTAACAAGTGCCCTAAGGGGCATTGTTTAAGGAACCCAAAAAAAGAAACAATGTCTTGAAAATACAAGTCAAACATTTTTTAGAGTCATAACCGTACAATGCCCTTAGGGCACTTGTTAGCATTTTCCTTAATTAAATTAAATTGAAGTTAATGACAAGATCTACTTTTTCTTTGCAGCTTTTCATAAAAAAATTCTTAATTAGTCTTTCTCATTGATTTTTCATTTTATATTTCTAGCTTGTACTCTTTTTAATCTTCTTTGCCTAAATAAGTGAGTTCCAAATACTTGAAACCAAAGGTGCCCTTAACTCATGCATTTTTGTCTGAAAATAAAGGTAGATGGTGATGTTTAGTAGTACATATATATTTCATTGGTGTTGGTGCATTGAAGGAACTTAACTATATAGGCATCTTGTTAAATTCGTCGTTTCTTGTGTGTGTGTGTGCGCTTGATAGTATTGTTTTTATGGGAACTATAAGACTTACATCATCACATATATAGCTTTTTCTTAAAATTTCCCTTTTGATGAGGTCACAGAAACTCTCAGATTTCACTGGCTTTTGTAGTGTTCTTAATATATTAACATTATTAAAGAATCTACTTTGTAATGAATCCAAAATTTGGAGGACTTCGGAACAGGAAGATTGGTGGGTGAATTTAGGTTTTGTAAATAATAACCAATGAATTAGGGTTTCTTCTGCACTTGTTCCCAGAAGTGGTAATTGCGAGGTATATACTCACAAGTTTCTTTCTAAATTGGAATGCAAAATGCAGATAGTAGAGTAGCTCCAAAGAGGTAAAGTACTTTCCTGGGGACAAGTGCATAGTGGATTTTAGATTATGATATGGATCAATTAACATGAAAAAAATCTTGCAAAGTTGATTGGATTTGATTAATGACCTAAAAAAGAGATTAAGCTATGATGTGTTAGTAGGTCCTTAAGAATAATGGTGAGTTTAATTGATTTGTTCTCTTGCTTCTTTTTCTCATTTGTCTCATCAAGGTTCCGTGTAAACACTACTCCCTATGGATGGAATATTTTATTAATTTGTATAATTTCATATAGATAGTGTGATTATATGTGTTGTCATCATTATGTATATTTTTGTGTCTGCAGGTATAGATGCATATTATAATGCTTGTAAAATTATGTTTGTGTGTTGATATTATTATATATATTTGATAAAAAACTTGTTTGCTTGTCTTTAACTAAAAATGGATATACATTGTCCTACATGCATTTTTCTATGATGTTCATTGTTGGTGCTTATCAAAAAACTGTGGCATCTATGTTGAATGAAGACTACAATTGAATTTGAGTCAAACTTTGCTGCTATAGAGTTAATGACTATGATGAAAATAAGCAGAACCTTATCACATAATGCATTGGATATAAACATGACCAAGCTTTTAGTGTATCATTGATTTCTAGCTTCCAACTATGTATGGGCCAAAAGAAGTATATAGTAGTAACTTTCCACATATTGATCCAAAGTTTTCAATTCAATGTTTCTTATCTTTATGTTCATGTTCCCCTCTATTTTTGTAGTATATCATCGTATGCTGGTTTTTCAATTATTGAAGTCTCCTTGTAGTAATGTACTGTCTTACCCTTCAAAACATAAAAAAACTTGAACTTCCACTTATCAATTATACATGTTTTTGTTTATGCTTTTGATGTGTTAATTTTGTTAAACTCTCCTATATAGAAAGATTATCTTAGGTTTTGGTTCTAACTAAATCCAAGTTTGTAAGGTTTTCGGGTGTCCATTTTATAAAGAAAATCGATCGATCTTCGACTTGAGTTTTTTCCATTTAGTTAAGCTATGCATTTTTCTTCGGCTTTGGCATCTGAAAACCTTCTCATTAAGATTACACTGTGTTAATTCTAATAATTAATAACAATGGCCTTTGATTATGTTTGAAGTAATATAATATATTGTACCATTTTTATCCCTATGATAATAGATTTCCACTGGTTTTGATTTCTGCATCTAGGCTTGACTAGGGTCTCTTGTGTGTATGGATTATGTTGCCCTTCATAAGTTAAGTATTTTGGTGAAGTATACATTCACGAGGAATAAACTTTATCATCTTTAACTTTGTCTTCTTTGAAGGAAAAGGAGTGTCCATTATTTCAGGGTTTAGATGCATGGAGCCTTGGAAATAATGGATGTGTAGATAATGTGCCTTCCCGGCTCTTTATCCTATGCACCTAGTTCAAATGTTAACCTTCAATGTGGTGAATCAATGATTTTCAATGATTGAAGATTGTACTTTTATCCTTTATTTAATTAAACATTCACCCTTGTGGTATCAAAATTTGTCCTAACCAATAATTTAGTAGCTTAGCTTGGCATTTAAATCCAACATATATGCTAGTTTCAGCTAGTTGAAATAGTATCATGGTTTAAAAAGTTAAGCTACTATGTTTGTTAACCTTATTGGTTTACTTTTATGTAAACAGCAAAGAAGAGTTCCAATTAAAAATAGGAGTACAAGGGGTACTCATCCATATACAACCAAGGGCAAGCTAATTACAAGGGGTACCCCCCACATATATTTGATTATAGGACCTAAGGATGCAATTCATATGACCTAAACACCACTCAAAGAAAAGGCTATTGCCTCCATGAAATACCTTCCAAGTAACTGAATGCCAAATTAGTGACAATCCCTCTCTTTTCCTTGCGCCCCCATATATACAAATATCCATGGTCCAAAAATCCTAACCATTTTGATTTCACTCCACATTGTTAATATTTTAACCTTTTTTTTATATATATATATATTTTCTTCCAATGTTAGATTTCTATATTTATTTTAATGTTCTGTTTATGAGGATTGGTTTTGCCAACTTGCCTTCTATTCATGTGTAAGTAATATTGATAGTAAATAAGAAGTCAAACAATAAAAAAAATTGTTACTGTTGTTTTAAAAAAAAAATGATGACTATAAATTGTTTTTACCGGTAGCAATTATTGTTGTTGGGTAAAAGCTCAAGTGTCACATTGCTTAGAAATGTCATAACATAGAACTTGGAATCAACTTTTTGCAAATCGGATTGAAGAGTAGGTCTTGGGATATACACAATACTATGTATTTTGAATACAACCTTTTATTTTCATATATTCAAAATATCCTTCTAATGTTATATTATTTGCAATCATCATAATTGATTTGATTCATATATATGATCAGCTTGTAGTGAAGGTGGAGATAGGAATGGATCATCTGAAGAAGATCATGTTGATATGTACAACAACATGATAGATCCTCAAGCAGAAGACAGGGAATTAAAGGGTCAGCTTTTGAGAAAATACAGTGGATACTTAGGCAGTCTGAAGCAAGAGTTTATGAAGAAAAGGAAAAAAGGAAAGCTTCCAAAAGAGGCAAGGCAACAATTGCTTGAATGGTGGAGCAGACATTACAAGTGGCCTTACCCATCTGTAAGCACCACTTTAAAAATTTGAATCCTTTTTCTTAATCTCTTGCCACAATATTTCTAATTAAATTTTGATTTCTTTCATTTCATAGGCAATCACCTAGTTACGGATTTTAATAAATTAATCAAAGATAATGACAACTCATGTTTCGACTTGGTGCATGTTTGGATTCACGAGTGATTTGCTAAAATTGTGTGGAGACCGTGATTTTTTTGTAGCTCCAATGTGTAGCTTTTGCAATAAGTCATGATCAACCAAGTCCACCATGATTTTTCAAATTTGCAAAGTCACGTTGAACCACCATGGTTTTTCAAGTCACGCTAAGCCGAACATGCATTTAGTATTTGAAGACTGATTTTTTAAGGTCAAAATGTGAGTTGTTTGCATTAATTTGAAGGTTTCGCATGACTATATTCTATATCAAATGTGTAAATTGGATTTGGGTTGTTGAGCAGTCACAATACCGTGCAGTCACACCACACCAAAGGTCATTGGATCAAAATAAGACGATTGGATTTAAAGTTTAGTGTGTTAGATTTTTTTTTAATCAAAATCTGCATTGATATTTGGACCTTTCGATCTTGATCCAACGGTCAATAATGTGGTCAACTGTGTGACTTGACGATTTTGTGATTTCACACGCAATCCAAAACCCTAACCATATAAACATGTATTGTACAATTTACTTTTTTTGAAGGTAAGAATTTTACTTTATAATAACTAGCATGAAGACAAATTGATAATAAGTTGTCTCACACAATTCAAATGTACTACTATAATTTATGAATAACAGGAATCACAGAAGCTGGCTCTAGCAGAGTCAACAGGTCTTGATCAGAAGCAAATAAACAACTGGTTTATCAATCAAAGGAAACGGCACTGGAAGCCTTCAGAGGACATGCAGTTTGTGGTGATGGATCCAAGTCATCCACACTATTACATGGATAATGTTCTCAGCAATTCATATCCCATGGATCTATCTAACACCATGCTCTAG
Protein sequence

>MS.gene02168.t1

MAHPHYHRLLEAYINCQKVGAPSEVVARLEEACATAVRMGGDAVGSGCLGEDPALDQFMEAYCEMLIKYEQELSKPLKEAMLFLQRIEVQFKNLTVSSSSDNIACSEGGDRNGSSEEDHVDMYNNMIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLEWWSRHYKWPYPSESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDPSHPHYYMDNVLSNSYPMDLSNTML