AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene021744

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene021744.t1 MTR_7g011130 87.784 352 36 2 1 345 1 352 0.0 628
MS.gene021744.t1 MTR_7g011120 83.582 335 29 4 12 345 1 310 0.0 558
MS.gene021744.t1 MTR_3g070030 71.545 369 64 4 1 345 1 352 0.0 514
MS.gene021744.t1 MTR_3g070040 71.268 355 61 6 12 345 1 335 6.45e-176 491
MS.gene021744.t1 MTR_6g012670 51.190 336 131 6 14 345 15 321 1.36e-101 302
MS.gene021744.t1 MTR_4g108760 45.304 362 156 10 13 345 11 359 4.61e-84 259
MS.gene021744.t1 MTR_3g435150 48.993 298 125 7 5 292 2 282 5.02e-81 249
MS.gene021744.t1 MTR_2g078700 55.204 221 73 3 22 223 26 239 2.99e-74 234
MS.gene021744.t1 MTR_6g084430 60.541 185 58 4 19 203 5 174 3.31e-70 222
MS.gene021744.t1 MTR_6g032770 55.909 220 82 6 14 229 13 221 1.21e-69 222
MS.gene021744.t1 MTR_7g085260 42.969 384 161 17 11 345 9 383 1.39e-69 222
MS.gene021744.t1 MTR_3g109340 60.241 166 54 2 19 182 22 177 2.59e-65 211
MS.gene021744.t1 MTR_3g109340 60.241 166 53 2 19 182 22 176 4.80e-65 210
MS.gene021744.t1 MTR_1g008740 57.692 182 61 4 11 186 2 173 4.34e-63 204
MS.gene021744.t1 MTR_1g008740 57.065 184 63 4 9 186 14 187 5.90e-63 204
MS.gene021744.t1 MTR_3g116070 61.783 157 56 3 7 160 12 167 3.86e-60 197
MS.gene021744.t1 MTR_8g059170 51.497 167 74 2 16 182 11 170 7.09e-55 182
MS.gene021744.t1 MTR_5g012080 47.393 211 81 6 22 220 10 202 1.36e-54 182
MS.gene021744.t1 MTR_4g101680 54.938 162 53 3 22 177 10 157 3.65e-54 182
MS.gene021744.t1 MTR_4g035590 56.707 164 54 3 22 181 11 161 1.31e-53 180
MS.gene021744.t1 MTR_8g024480 51.149 174 82 1 14 184 10 183 1.46e-53 182
MS.gene021744.t1 MTR_4g036030 54.088 159 59 2 22 177 10 157 2.36e-53 179
MS.gene021744.t1 MTR_2g079990 48.503 167 77 1 16 182 13 170 1.29e-52 177
MS.gene021744.t1 MTR_2g064470 54.321 162 62 5 16 176 8 158 5.05e-52 174
MS.gene021744.t1 MTR_5g041940 48.824 170 78 2 17 184 1 163 7.16e-52 172
MS.gene021744.t1 MTR_8g094580 49.711 173 77 4 17 187 5 169 1.81e-51 172
MS.gene021744.t1 MTR_3g088110 47.929 169 77 3 16 182 4 163 2.21e-51 172
MS.gene021744.t1 MTR_4g081870 48.810 168 77 2 18 183 8 168 3.11e-51 171
MS.gene021744.t1 MTR_2g062730 52.439 164 63 3 22 181 13 165 3.22e-51 174
MS.gene021744.t1 MTR_2g080010 47.701 174 81 3 15 181 11 181 3.67e-51 174
MS.gene021744.t1 MTR_5g021710 53.125 160 61 3 22 178 11 159 4.71e-51 173
MS.gene021744.t1 MTR_2157s0010 41.250 240 123 5 12 236 1 237 6.02e-51 171
MS.gene021744.t1 MTR_3g093040 49.425 174 70 3 17 181 106 270 5.67e-50 169
MS.gene021744.t1 MTR_7g085220 46.629 178 81 2 12 180 1 173 6.75e-50 170
MS.gene021744.t1 MTR_8g076110 45.455 187 88 3 22 205 9 184 8.83e-50 169
MS.gene021744.t1 MTR_5g069030 39.407 236 121 4 18 251 24 239 9.70e-50 176
MS.gene021744.t1 MTR_7g100990 50.000 168 77 3 11 176 3 165 1.11e-49 169
MS.gene021744.t1 MTR_4g089135 47.126 174 76 3 21 178 17 190 1.20e-49 169
MS.gene021744.t1 MTR_2g079990 44.086 186 85 2 16 182 13 198 1.28e-49 170
MS.gene021744.t1 MTR_3g096920 47.126 174 79 3 16 186 4 167 4.12e-49 166
MS.gene021744.t1 MTR_1g069805 47.337 169 71 3 22 188 13 165 4.98e-49 166
MS.gene021744.t1 MTR_3g093050 52.866 157 63 2 22 176 25 172 7.08e-49 173
MS.gene021744.t1 MTR_1g096430 50.311 161 60 3 22 176 10 156 7.17e-49 167
MS.gene021744.t1 MTR_3g093050 52.866 157 63 2 22 176 25 172 1.48e-48 172
MS.gene021744.t1 MTR_8g467490 48.447 161 77 3 22 178 17 175 4.66e-48 167
MS.gene021744.t1 MTR_0036s0150 50.292 171 71 4 22 189 8 167 1.20e-47 169
MS.gene021744.t1 MTR_8g063550 44.000 175 86 3 18 190 5 169 2.75e-47 163
MS.gene021744.t1 MTR_1g090723 40.909 242 120 6 12 250 1 222 3.69e-47 168
MS.gene021744.t1 MTR_1g090723 40.909 242 120 6 12 250 1 222 6.73e-47 168
MS.gene021744.t1 MTR_6g011860 42.233 206 112 5 22 224 18 219 6.93e-47 163
MS.gene021744.t1 MTR_3g096920 56.391 133 56 2 12 144 1 131 1.11e-46 161
MS.gene021744.t1 MTR_1g090723 40.909 242 121 6 12 250 1 223 1.24e-46 167
MS.gene021744.t1 MTR_8g063550 44.000 175 86 3 18 190 5 169 1.43e-46 164
MS.gene021744.t1 MTR_5g040420 47.826 161 77 3 22 178 17 174 1.77e-46 162
MS.gene021744.t1 MTR_8g063550 44.000 175 86 3 18 190 5 169 2.05e-46 163
MS.gene021744.t1 MTR_7g005280 49.419 172 71 5 13 182 9 166 2.49e-46 158
MS.gene021744.t1 MTR_2g093810 42.500 200 100 3 19 216 14 200 8.82e-46 159
MS.gene021744.t1 MTR_7g097090 47.436 156 67 2 22 175 13 155 1.09e-45 157
MS.gene021744.t1 MTR_2g064090 55.000 140 57 2 17 150 4 143 1.14e-45 159
MS.gene021744.t1 MTR_6g477900 49.383 162 71 2 17 176 4 156 2.38e-45 155
MS.gene021744.t1 MTR_5g076850 41.096 219 108 3 17 223 4 213 3.15e-45 164
MS.gene021744.t1 MTR_3g096140 44.444 171 83 4 22 190 10 170 1.95e-44 154
MS.gene021744.t1 MTR_3g064580 48.148 162 74 2 17 176 4 157 5.71e-44 160
MS.gene021744.t1 MTR_8g093580 42.286 175 89 3 18 190 5 169 6.81e-44 157
MS.gene021744.t1 MTR_4g098630 40.455 220 112 6 15 229 2 207 7.68e-44 154
MS.gene021744.t1 MTR_5g014300 54.545 132 51 2 22 144 9 140 1.25e-43 153
MS.gene021744.t1 MTR_3g096140 44.444 171 83 4 22 190 10 170 1.59e-43 154
MS.gene021744.t1 MTR_2g086880 54.098 122 55 1 22 142 21 142 1.76e-43 157
MS.gene021744.t1 MTR_2g086880 54.098 122 55 1 22 142 21 142 2.12e-43 158
MS.gene021744.t1 MTR_2g068920 43.814 194 93 7 1 182 1 190 5.95e-43 150
MS.gene021744.t1 MTR_5g090970 42.690 171 93 2 9 176 10 178 7.04e-43 150
MS.gene021744.t1 MTR_2g068880 46.707 167 81 4 22 181 25 190 1.88e-42 150
MS.gene021744.t1 MTR_4g134460 45.513 156 73 2 22 176 57 201 3.20e-42 152
MS.gene021744.t1 MTR_5g090970 42.690 171 92 3 9 176 10 177 1.61e-41 147
MS.gene021744.t1 MTR_1g097300 44.444 171 81 4 22 189 22 181 3.80e-41 151
MS.gene021744.t1 MTR_8g023840 57.812 128 48 5 21 143 13 139 1.19e-38 142
MS.gene021744.t1 MTR_1g090720 49.068 161 77 2 22 180 45 202 2.64e-38 142
MS.gene021744.t1 MTR_2g064730 85.526 76 10 1 220 294 6 81 2.01e-37 129
MS.gene021744.t1 MTR_3g096140 42.675 157 78 4 36 190 3 149 9.68e-37 135
MS.gene021744.t1 MTR_4g075980 50.000 130 62 1 22 148 18 147 1.27e-36 134
MS.gene021744.t1 MTR_8g023860 54.688 128 52 5 21 143 14 140 1.69e-36 136
MS.gene021744.t1 MTR_8g099750 39.655 174 91 4 12 180 7 171 5.73e-34 125
MS.gene021744.t1 MTR_3g098810 38.235 170 96 3 12 177 7 171 2.24e-33 124
MS.gene021744.t1 MTR_8g094580 52.033 123 49 4 67 187 1 115 4.96e-33 122
MS.gene021744.t1 MTR_3g098810 43.066 137 72 2 12 144 7 141 1.17e-31 117
MS.gene021744.t1 MTR_2g086690 46.512 129 62 4 22 143 7 135 3.55e-31 118
MS.gene021744.t1 MTR_8g023900 34.630 257 118 11 21 258 195 420 6.46e-31 122
MS.gene021744.t1 MTR_8g023900 37.500 200 98 9 21 212 14 194 3.45e-29 117
MS.gene021744.t1 MTR_8g023930 34.510 255 118 11 21 257 26 249 8.14e-31 122
MS.gene021744.t1 MTR_4g052620 38.690 168 94 4 19 177 5 172 3.98e-30 115
MS.gene021744.t1 MTR_7g105170 38.012 171 93 6 22 184 7 172 2.24e-27 108
MS.gene021744.t1 MTR_4g094302 34.118 170 99 3 21 188 13 171 1.77e-26 104
MS.gene021744.t1 MTR_8g023880 46.099 141 54 7 22 143 10 147 1.12e-25 104
MS.gene021744.t1 MTR_4g094302 38.281 128 69 2 19 144 11 130 1.24e-24 98.6
MS.gene021744.t1 MTR_7g070140 50.000 88 39 2 72 154 17 104 6.85e-23 93.2
MS.gene021744.t1 MTR_8g093790 35.928 167 75 7 17 183 8 142 1.56e-18 82.8
MS.gene021744.t1 MTR_7g083360 31.818 154 92 6 12 155 3 153 1.86e-17 79.0
MS.gene021744.t1 MTR_3g096400 31.707 164 103 4 15 175 3 160 2.69e-17 79.7
MS.gene021744.t1 MTR_4g078875 28.713 202 107 7 19 197 48 235 1.05e-14 73.9
MS.gene021744.t1 MTR_4g088245 29.293 198 107 6 2 180 51 234 1.70e-13 70.9
MS.gene021744.t1 MTR_7g083330 33.333 129 80 5 17 142 16 141 3.53e-13 67.8
MS.gene021744.t1 MTR_8g069160 30.120 166 99 4 2 151 51 215 3.46e-12 66.2
MS.gene021744.t1 MTR_7g083370 31.579 133 85 4 21 150 12 141 8.02e-12 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene021744.t1 AT5G61430 45.763 354 144 9 13 345 10 336 3.05e-87 266
MS.gene021744.t1 AT5G07680 45.845 349 149 11 10 345 8 329 3.64e-86 263
MS.gene021744.t1 AT5G07680 46.471 340 142 11 19 345 3 315 7.00e-85 259
MS.gene021744.t1 AT3G29035 52.941 238 95 2 3 230 8 238 7.48e-80 246
MS.gene021744.t1 AT5G39610 64.205 176 56 1 13 188 14 182 1.78e-74 232
MS.gene021744.t1 AT3G18400 43.333 330 156 9 22 343 8 314 1.37e-71 225
MS.gene021744.t1 AT5G18270 45.016 311 133 10 15 314 17 300 3.66e-70 222
MS.gene021744.t1 AT5G18270 45.016 311 133 10 15 314 17 300 4.90e-70 222
MS.gene021744.t1 AT3G04060 57.488 207 79 5 7 211 8 207 1.12e-69 221
MS.gene021744.t1 AT5G53950 67.516 157 42 2 22 176 20 169 1.49e-68 219
MS.gene021744.t1 AT2G24430 59.091 176 60 2 9 182 6 171 3.57e-66 211
MS.gene021744.t1 AT2G24430 59.091 176 60 2 9 182 6 171 3.57e-66 211
MS.gene021744.t1 AT3G15170 51.818 220 91 4 11 228 13 219 7.82e-65 208
MS.gene021744.t1 AT1G76420 61.146 157 49 2 22 176 25 171 9.52e-63 203
MS.gene021744.t1 AT5G61430 42.667 300 124 9 67 345 1 273 2.13e-61 197
MS.gene021744.t1 AT2G46770 49.733 187 87 2 14 193 11 197 8.97e-56 186
MS.gene021744.t1 AT1G56010 44.053 227 112 7 1 225 1 214 5.91e-55 182
MS.gene021744.t1 AT3G12977 39.167 240 121 5 22 261 21 235 1.08e-54 181
MS.gene021744.t1 AT3G61910 41.322 242 122 3 14 235 6 247 1.56e-54 182
MS.gene021744.t1 AT4G10350 57.055 163 58 3 22 181 12 165 3.06e-54 181
MS.gene021744.t1 AT1G12260 55.975 159 56 3 22 177 10 157 1.07e-53 180
MS.gene021744.t1 AT1G12260 55.346 159 57 3 22 177 10 157 1.48e-53 181
MS.gene021744.t1 AT4G27410 50.610 164 66 3 16 176 11 162 1.74e-53 178
MS.gene021744.t1 AT3G15500 47.305 167 79 1 16 182 11 168 6.58e-53 177
MS.gene021744.t1 AT2G18060 46.269 201 93 4 15 212 5 193 6.85e-53 179
MS.gene021744.t1 AT2G18060 46.269 201 93 4 15 212 5 193 6.85e-53 179
MS.gene021744.t1 AT1G52890 47.904 167 78 1 16 182 11 168 2.37e-52 176
MS.gene021744.t1 AT1G62700 55.346 159 57 3 22 177 10 157 2.41e-52 178
MS.gene021744.t1 AT1G62700 55.346 159 57 3 22 177 10 157 2.41e-52 178
MS.gene021744.t1 AT1G33280 49.741 193 74 5 22 203 11 191 2.52e-52 175
MS.gene021744.t1 AT4G35580 47.895 190 83 4 22 206 12 190 1.71e-51 178
MS.gene021744.t1 AT4G35580 47.895 190 83 4 22 206 12 190 2.05e-51 179
MS.gene021744.t1 AT4G35580 47.895 190 83 4 22 206 12 190 2.44e-51 178
MS.gene021744.t1 AT5G66300 53.125 160 62 3 22 178 15 164 2.87e-51 172
MS.gene021744.t1 AT5G08790 49.102 167 80 2 16 182 4 165 3.79e-51 171
MS.gene021744.t1 AT1G32770 36.637 333 172 11 14 323 11 327 4.34e-51 174
MS.gene021744.t1 AT1G01720 46.154 169 85 2 14 182 2 164 5.65e-51 171
MS.gene021744.t1 AT1G77450 44.330 194 96 4 17 207 8 192 8.73e-51 170
MS.gene021744.t1 AT1G33060 52.866 157 63 2 22 176 27 174 9.94e-51 179
MS.gene021744.t1 AT1G71930 51.266 158 63 3 22 176 12 158 1.11e-50 172
MS.gene021744.t1 AT1G71930 51.266 158 63 3 22 176 12 158 1.11e-50 172
MS.gene021744.t1 AT1G33060 52.866 157 63 2 22 176 27 174 1.13e-50 179
MS.gene021744.t1 AT1G61110 50.943 159 74 2 22 176 19 177 2.07e-50 171
MS.gene021744.t1 AT5G63790 48.837 172 82 3 11 182 53 218 3.58e-50 170
MS.gene021744.t1 AT5G63790 48.837 172 82 3 11 182 43 208 3.76e-50 170
MS.gene021744.t1 AT3G15510 48.256 172 79 3 23 187 21 189 4.80e-50 171
MS.gene021744.t1 AT3G04070 47.917 192 87 4 13 196 4 190 5.15e-50 170
MS.gene021744.t1 AT4G36160 52.201 159 62 3 22 177 13 160 6.81e-50 171
MS.gene021744.t1 AT4G36160 52.201 159 62 3 22 177 13 160 6.81e-50 171
MS.gene021744.t1 AT4G36160 52.201 159 62 3 22 177 17 164 7.80e-50 171
MS.gene021744.t1 AT5G39820 47.093 172 77 2 22 179 23 194 9.21e-50 169
MS.gene021744.t1 AT5G62380 48.876 178 71 4 22 190 10 176 1.05e-49 170
MS.gene021744.t1 AT5G62380 48.876 178 71 4 22 190 10 176 1.05e-49 170
MS.gene021744.t1 AT4G27410 45.856 181 66 4 16 176 11 179 5.91e-49 167
MS.gene021744.t1 AT1G69490 48.485 165 76 2 22 184 12 169 1.90e-48 164
MS.gene021744.t1 AT2G27300 56.349 126 54 1 22 146 17 142 2.56e-48 166
MS.gene021744.t1 AT3G04070 46.667 195 83 4 22 196 13 206 4.72e-48 166
MS.gene021744.t1 AT3G10480 52.761 163 62 3 22 180 30 181 8.38e-48 167
MS.gene021744.t1 AT1G26870 46.111 180 92 2 1 178 1 177 1.52e-47 166
MS.gene021744.t1 AT5G04410 50.000 170 73 3 22 189 12 171 1.55e-47 169
MS.gene021744.t1 AT3G10480 52.439 164 62 3 22 180 30 182 3.25e-47 166
MS.gene021744.t1 AT1G79580 50.299 167 67 4 16 178 14 168 3.96e-47 164
MS.gene021744.t1 AT1G79580 50.299 167 67 4 16 178 14 168 3.96e-47 164
MS.gene021744.t1 AT1G79580 50.299 167 67 4 16 178 14 168 3.96e-47 164
MS.gene021744.t1 AT1G79580 50.299 167 67 4 16 178 14 168 3.96e-47 164
MS.gene021744.t1 AT1G79580 50.299 167 67 4 16 178 14 168 3.96e-47 164
MS.gene021744.t1 AT3G49530 49.686 159 68 3 21 176 15 164 4.07e-47 164
MS.gene021744.t1 AT3G10500 48.235 170 76 3 22 189 12 171 6.35e-47 167
MS.gene021744.t1 AT3G10490 51.852 162 66 3 22 180 30 182 1.37e-46 158
MS.gene021744.t1 AT3G49530 49.686 159 68 3 21 176 15 164 1.57e-46 164
MS.gene021744.t1 AT3G10490 51.852 162 66 3 22 180 30 182 1.44e-45 161
MS.gene021744.t1 AT3G03200 50.920 163 68 3 17 176 4 157 1.62e-45 162
MS.gene021744.t1 AT5G46590 57.480 127 51 2 21 144 8 134 2.70e-45 156
MS.gene021744.t1 AT5G24590 47.826 161 72 3 21 178 15 166 5.16e-45 160
MS.gene021744.t1 AT5G46590 57.937 126 50 2 22 144 9 134 5.55e-45 156
MS.gene021744.t1 AT5G13180 45.665 173 79 4 12 182 7 166 7.86e-45 154
MS.gene021744.t1 AT3G17730 55.725 131 56 1 17 145 4 134 7.90e-45 154
MS.gene021744.t1 AT1G65910 45.455 176 83 3 17 189 4 169 9.47e-45 162
MS.gene021744.t1 AT2G33480 48.171 164 67 3 17 177 13 161 1.42e-44 154
MS.gene021744.t1 AT5G17260 49.693 163 70 3 17 176 4 157 2.18e-44 159
MS.gene021744.t1 AT5G09330 42.614 176 89 3 16 189 3 168 2.27e-44 159
MS.gene021744.t1 AT5G09330 42.614 176 89 3 16 189 3 168 2.27e-44 159
MS.gene021744.t1 AT5G09330 42.614 176 89 3 16 189 3 168 2.27e-44 159
MS.gene021744.t1 AT5G09330 42.614 176 89 3 16 189 3 168 2.27e-44 159
MS.gene021744.t1 AT5G09330 42.614 176 89 3 16 189 3 168 2.27e-44 159
MS.gene021744.t1 AT1G52880 48.750 160 77 2 23 178 21 179 3.37e-44 154
MS.gene021744.t1 AT2G02450 43.478 184 89 3 22 204 54 223 4.54e-44 155
MS.gene021744.t1 AT2G02450 43.478 184 89 3 22 204 54 223 5.05e-44 156
MS.gene021744.t1 AT2G43000 42.308 156 82 1 21 176 20 167 5.28e-44 153
MS.gene021744.t1 AT2G33480 48.447 161 69 3 17 177 13 159 6.29e-44 152
MS.gene021744.t1 AT4G28530 38.938 226 102 6 18 220 9 221 8.54e-44 154
MS.gene021744.t1 AT5G64060 42.045 176 90 4 16 189 3 168 6.53e-43 152
MS.gene021744.t1 AT1G54330 48.765 162 69 2 17 176 4 153 9.78e-43 150
MS.gene021744.t1 AT5G22290 50.388 129 63 1 22 149 24 152 1.04e-42 151
MS.gene021744.t1 AT4G17980 55.118 127 53 2 22 144 9 135 2.22e-42 148
MS.gene021744.t1 AT4G17980 55.118 127 53 2 22 144 9 135 4.06e-42 148
MS.gene021744.t1 AT3G44290 51.163 129 62 1 22 149 17 145 4.99e-42 146
MS.gene021744.t1 AT3G44290 51.163 129 62 1 22 149 17 145 6.03e-41 146
MS.gene021744.t1 AT3G10480 44.162 197 61 4 22 180 30 215 5.24e-40 148
MS.gene021744.t1 AT1G32510 49.296 142 63 2 22 154 9 150 2.03e-39 141
MS.gene021744.t1 AT1G34180 42.857 175 87 4 18 189 14 178 9.69e-39 143
MS.gene021744.t1 AT1G34190 42.857 175 87 4 18 189 14 178 2.44e-38 144
MS.gene021744.t1 AT1G34180 42.857 175 87 4 18 189 14 178 4.49e-38 143
MS.gene021744.t1 AT3G12910 34.586 266 129 9 13 237 15 276 2.29e-37 136
MS.gene021744.t1 AT3G12977 38.660 194 94 5 68 261 14 182 3.42e-37 133
MS.gene021744.t1 AT1G56010 47.500 160 70 6 67 225 1 147 5.75e-37 134
MS.gene021744.t1 AT1G34180 40.107 187 87 4 18 189 14 190 6.41e-37 138
MS.gene021744.t1 AT1G34180 40.107 187 87 4 18 189 14 190 2.28e-36 138
MS.gene021744.t1 AT2G17040 48.507 134 65 2 22 151 9 142 2.76e-36 132
MS.gene021744.t1 AT4G10350 57.895 114 36 3 68 178 11 115 1.05e-34 129
MS.gene021744.t1 AT1G32870 50.758 132 61 2 22 151 13 142 3.93e-34 132
MS.gene021744.t1 AT1G32870 50.758 132 61 2 22 151 13 142 4.51e-34 131
MS.gene021744.t1 AT1G32870 50.758 132 61 2 22 151 49 178 6.86e-34 131
MS.gene021744.t1 AT5G04395 45.775 142 61 2 22 147 31 172 7.08e-32 118
MS.gene021744.t1 AT2G33480 49.541 109 40 2 72 177 8 104 1.90e-28 110
MS.gene021744.t1 AT4G01550 44.030 134 69 4 17 144 2 135 2.04e-28 115
MS.gene021744.t1 AT3G04420 41.270 126 70 2 21 142 5 130 5.78e-26 105
MS.gene021744.t1 AT5G22380 36.686 169 96 6 22 180 8 175 7.88e-26 103
MS.gene021744.t1 AT4G28530 46.296 108 42 1 18 109 9 116 1.13e-25 105
MS.gene021744.t1 AT3G04420 41.270 126 70 2 21 142 5 130 1.26e-25 105
MS.gene021744.t1 AT3G44350 31.513 238 134 9 18 236 4 231 1.81e-25 103
MS.gene021744.t1 AT1G02230 45.736 129 60 6 21 142 5 130 5.02e-25 104
MS.gene021744.t1 AT3G44350 39.597 149 79 6 18 155 4 152 1.68e-24 98.2
MS.gene021744.t1 AT4G01520 37.086 151 80 6 17 160 2 144 7.06e-24 100
MS.gene021744.t1 AT4G01540 37.736 159 78 7 22 173 7 151 7.43e-24 102
MS.gene021744.t1 AT4G01540 37.736 159 78 7 22 173 7 151 8.02e-24 101
MS.gene021744.t1 AT4G01540 37.736 159 78 7 22 173 7 151 1.11e-23 101
MS.gene021744.t1 AT4G01540 37.736 159 78 7 22 173 7 151 1.26e-23 101
MS.gene021744.t1 AT2G18060 45.690 116 51 3 97 212 2 105 2.34e-23 98.2
MS.gene021744.t1 AT5G64530 33.898 177 95 6 21 188 5 168 1.52e-22 93.6
MS.gene021744.t1 AT3G10490 54.444 90 31 2 92 180 2 82 1.24e-21 94.7
MS.gene021744.t1 AT3G10490 54.444 90 31 2 92 180 2 82 1.24e-21 94.7
MS.gene021744.t1 AT1G01010 36.129 155 73 6 21 161 5 147 1.43e-21 95.5
MS.gene021744.t1 AT5G64530 36.508 126 66 3 21 144 5 118 3.05e-21 89.4
MS.gene021744.t1 AT1G02250 40.310 129 67 4 21 142 5 130 4.61e-21 93.2
MS.gene021744.t1 AT1G02220 38.095 126 71 3 21 142 5 127 4.69e-21 93.6
MS.gene021744.t1 AT2G43000 37.113 97 53 1 80 176 1 89 7.10e-18 81.3
MS.gene021744.t1 AT5G22290 59.615 52 21 0 98 149 2 53 1.06e-17 81.6
MS.gene021744.t1 AT5G14000 29.534 193 113 4 7 197 3 174 3.01e-16 77.0
MS.gene021744.t1 AT3G56530 31.343 134 89 2 15 145 48 181 6.11e-16 77.8
MS.gene021744.t1 AT5G50820 32.877 146 80 6 7 144 3 138 1.15e-15 75.1
MS.gene021744.t1 AT5G14000 30.667 150 99 3 7 153 3 150 1.06e-14 71.2
MS.gene021744.t1 AT3G04430 33.557 149 76 5 25 160 6 144 1.41e-14 72.0
MS.gene021744.t1 AT3G55210 29.861 144 87 3 19 148 11 154 6.76e-14 71.6
MS.gene021744.t1 AT4G28500 30.601 183 91 7 19 180 59 226 6.61e-13 68.9

Find 70 sgRNAs with CRISPR-Local

Find 154 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATTCAGTGATGGCTAAAA+TGG 0.255694 7.4:-88192270 MS.gene021744:intron
TACAAGGGAAATTCATTAAT+CGG 0.266589 7.4:-88192131 MS.gene021744:CDS
GCGTAATTGTGGAAAGAAAA+TGG 0.290534 7.4:-88191428 MS.gene021744:CDS
TTGCAGCCAACGATAGCTTT+TGG 0.305597 7.4:-88190949 MS.gene021744:CDS
GATATCTCATCTGTGGTATA+TGG 0.312060 7.4:-88191031 MS.gene021744:CDS
ATCTCTATTGTCTCCATTGT+TGG 0.314151 7.4:-88191347 MS.gene021744:CDS
TTTGGTTTCTCTGTTTGATT+TGG 0.323737 7.4:+88191250 None:intergenic
TTCATCCTCTTCAAAACAAA+TGG 0.376699 7.4:-88191176 MS.gene021744:CDS
ATCGGTTGTGCTCAGGAAAA+AGG 0.384221 7.4:+88192000 None:intergenic
GAGCTACTAATGCTGGCTAT+TGG 0.387868 7.4:-88192181 MS.gene021744:CDS
GCCAGCATTAGTAGCTCTAT+TGG 0.388516 7.4:+88192187 None:intergenic
GCAATTGTTGCTTCAGCTAA+AGG 0.397040 7.4:+88191145 None:intergenic
AGAGATGCAATAGTATTTGA+TGG 0.410698 7.4:+88191364 None:intergenic
TATTGGTCCTTTGACCAGTT+GGG 0.417126 7.4:+88192204 None:intergenic
CAATTGTTGCTTCAGCTAAA+GGG 0.417276 7.4:+88191146 None:intergenic
CTCTACCAAAAGAAAACTCT+TGG 0.419341 7.4:+88191071 None:intergenic
ACAAGGGAAATTCATTAATC+GGG 0.420542 7.4:-88192130 MS.gene021744:CDS
TTTCTCTGTTTGATTTGGAT+TGG 0.425619 7.4:+88191255 None:intergenic
GATTTGTCACCAGCTTCTAC+TGG 0.426239 7.4:-88190974 MS.gene021744:CDS
ATTAGAGAAATCAGAAATAG+TGG 0.434895 7.4:+88191294 None:intergenic
ACATGTTTCAAAGGTGGTCT+AGG 0.435057 7.4:-88191003 MS.gene021744:CDS
CTATTGGTCCTTTGACCAGT+TGG 0.441493 7.4:+88192203 None:intergenic
AAAATGGATGGGTCAAAACT+TGG 0.452019 7.4:-88191412 MS.gene021744:CDS
GAAAAGGTCAAATTTGATGC+TGG 0.459107 7.4:-88193085 MS.gene021744:CDS
CCTGACCATTGAGGCTTGGT+TGG 0.460064 7.4:+88191117 None:intergenic
AAATCAATACCTTGTCAAGA+AGG 0.466786 7.4:-88193029 MS.gene021744:CDS
GCTGGCTATTGGAAAGCAAC+AGG 0.467708 7.4:-88192170 MS.gene021744:CDS
CCAACCAAGCCTCAATGGTC+AGG 0.470889 7.4:-88191117 MS.gene021744:CDS
TATGAATAAGTTTGAACCAT+GGG 0.479736 7.4:-88192963 MS.gene021744:CDS
ACCAATAGAGCTACTAATGC+TGG 0.495849 7.4:-88192188 MS.gene021744:CDS
TTGATTTATAAGCTCTTCAT+CGG 0.497039 7.4:+88193045 None:intergenic
TATTCAGTGATGGCTAAAAT+GGG 0.501147 7.4:-88192269 MS.gene021744:intron
TGATTCCAACCAAGCCTCAA+TGG 0.502339 7.4:-88191122 MS.gene021744:CDS
GATGGCTAAAATGGGAGAAA+CGG 0.521245 7.4:-88192261 MS.gene021744:CDS
TCTACCAAAAGAAAACTCTT+GGG 0.529282 7.4:+88191072 None:intergenic
TTTATAAGCTCTTCATCGGT+CGG 0.536559 7.4:+88193049 None:intergenic
AGGGACAGAAAATACCCAAC+TGG 0.538414 7.4:-88192218 MS.gene021744:CDS
AATTGTGGAAAGAAAATGGA+TGG 0.538683 7.4:-88191424 MS.gene021744:CDS
AATTCCTGACCATTGAGGCT+TGG 0.540638 7.4:+88191113 None:intergenic
CAACCGATCCACACATGGAA+TGG 0.549333 7.4:-88191985 MS.gene021744:intron
TGTGTGGATCGGTTGTGCTC+AGG 0.549723 7.4:+88191993 None:intergenic
GTCTTTGAGAAGCGTAATTG+TGG 0.550437 7.4:-88191439 MS.gene021744:CDS
TGATGAATTCCTGACCATTG+AGG 0.558569 7.4:+88191108 None:intergenic
AATTCACCTGGTAAATCCCA+TGG 0.558848 7.4:+88192947 None:intergenic
GAAATTCCAAAAGCTATCGT+TGG 0.561554 7.4:+88190943 None:intergenic
TTACCATTCCATGTGTGGAT+CGG 0.563735 7.4:+88191982 None:intergenic
GTATTCATGCATGACCCAGT+TGG 0.566311 7.4:+88192055 None:intergenic
ATGGAAATGACATGTTTCAA+AGG 0.567928 7.4:-88191012 MS.gene021744:CDS
CAAAGACAAAGAGATTTACA+AGG 0.568333 7.4:-88192147 MS.gene021744:CDS
CAATATTACCATTCCATGTG+TGG 0.569497 7.4:+88191977 None:intergenic
TTTGAACCATGGGATTTACC+AGG 0.572917 7.4:-88192953 MS.gene021744:intron
GCTGCAAGTCCAGTAGAAGC+TGG 0.583251 7.4:+88190965 None:intergenic
AGAGTGAGTTACCCTCCAAT+CGG 0.585613 7.4:+88192033 None:intergenic
GGTCATGCATGAATACCGAT+TGG 0.588791 7.4:-88192048 MS.gene021744:CDS
ATTTGATGGTCCTTCTCTAG+AGG 0.592265 7.4:+88191378 None:intergenic
CATGCATGAATACCGATTGG+AGG 0.592763 7.4:-88192045 MS.gene021744:CDS
GAAAATACCCAACTGGTCAA+AGG 0.598845 7.4:-88192211 MS.gene021744:CDS
CTAAAATGGGAGAAACGGAA+TGG 0.600206 7.4:-88192256 MS.gene021744:CDS
AGGTCTAACTCCTCTAGAGA+AGG 0.604208 7.4:-88191388 MS.gene021744:CDS
ATATGAATAAGTTTGAACCA+TGG 0.611857 7.4:-88192964 MS.gene021744:CDS
TGGATGGGTCAAAACTTGGA+AGG 0.614869 7.4:-88191408 MS.gene021744:CDS
ATGCATGAATACCGATTGGA+GGG 0.621001 7.4:-88192044 MS.gene021744:CDS
GAAATGACATGTTTCAAAGG+TGG 0.623013 7.4:-88191009 MS.gene021744:CDS
TATGGAGAATAATCCAACAA+TGG 0.629197 7.4:+88191334 None:intergenic
GAGCACAACCGATCCACACA+TGG 0.630980 7.4:-88191990 MS.gene021744:CDS
TGTCATCAACCTTCTTGACA+AGG 0.634308 7.4:+88193020 None:intergenic
ATTGTGGAAAGAAAATGGAT+GGG 0.648110 7.4:-88191423 MS.gene021744:CDS
AAAGACAAAGAGATTTACAA+GGG 0.662925 7.4:-88192146 MS.gene021744:CDS
TGATGCTGATATCTCATCTG+TGG 0.664657 7.4:-88191038 MS.gene021744:CDS
TACATAGGAAGAGCTCCAAG+AGG 0.736988 7.4:-88192086 MS.gene021744:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATAATTGATTTTTTGATAA+AGG + chr7.4:88192408-88192427 None:intergenic 10.0%
!! AAAAAGAAAGAAAAACAATT+TGG - chr7.4:88191460-88191479 MS.gene021744:CDS 15.0%
!!! AAAAAATCTTTTCAAAATCA+CGG + chr7.4:88192228-88192247 None:intergenic 15.0%
!!! AATTATGCTTTCTTATTTTT+TGG - chr7.4:88191773-88191792 MS.gene021744:intron 15.0%
!!! AGTTTACTTTATTTAGAAAA+AGG + chr7.4:88192354-88192373 None:intergenic 15.0%
!!! GTGAATTTAATGTTTTTTAT+AGG - chr7.4:88191136-88191155 MS.gene021744:CDS 15.0%
!! GGTTACACATTAATATTAAA+TGG + chr7.4:88192577-88192596 None:intergenic 20.0%
!! TAAAAAACATTAAATTCACC+TGG + chr7.4:88191135-88191154 None:intergenic 20.0%
!! TCAAAAAATGGAAAATGAAA+AGG - chr7.4:88190966-88190985 MS.gene021744:CDS 20.0%
!!! ATAAATTTTAGAGAAACTAC+TGG - chr7.4:88192432-88192451 MS.gene021744:intron 20.0%
!!! TTCATTTTCCATTTTTTGAT+TGG + chr7.4:88190965-88190984 None:intergenic 20.0%
! AAAGACAAAGAGATTTACAA+GGG - chr7.4:88191921-88191940 MS.gene021744:intron 25.0%
! AACAGATCTTAGTAATTGTT+TGG + chr7.4:88192305-88192324 None:intergenic 25.0%
! ACGTAATTATATCAAACACA+TGG + chr7.4:88192198-88192217 None:intergenic 25.0%
! ACTGTACAAAATCAATGATA+TGG - chr7.4:88191262-88191281 MS.gene021744:CDS 25.0%
! ATATGAATAAGTTTGAACCA+TGG - chr7.4:88191103-88191122 MS.gene021744:CDS 25.0%
! ATGATTTCTACTTTGACTAT+AGG - chr7.4:88192142-88192161 MS.gene021744:CDS 25.0%
! ATTAGAGAAATCAGAAATAG+TGG + chr7.4:88192776-88192795 None:intergenic 25.0%
! GATAAAGGTTACATTTATCA+TGG + chr7.4:88192393-88192412 None:intergenic 25.0%
! GTATGTTTCCAATCAAAAAA+TGG - chr7.4:88190954-88190973 MS.gene021744:CDS 25.0%
! TACAAGGGAAATTCATTAAT+CGG - chr7.4:88191936-88191955 MS.gene021744:intron 25.0%
! TATGAATAAGTTTGAACCAT+GGG - chr7.4:88191104-88191123 MS.gene021744:CDS 25.0%
! TCATAAAAACATACCAAAGA+AGG - chr7.4:88191404-88191423 MS.gene021744:CDS 25.0%
! TTGATTTATAAGCTCTTCAT+CGG + chr7.4:88191025-88191044 None:intergenic 25.0%
!! AAAATTTGCTCCAATTACAA+GGG - chr7.4:88191329-88191348 MS.gene021744:CDS 25.0%
!!! AATATCCATTTGTTTTGAAG+AGG + chr7.4:88192899-88192918 None:intergenic 25.0%
!!! GTTTGATTTTCACTATTGTA+TGG + chr7.4:88192754-88192773 None:intergenic 25.0%
!!! TTTTTTGGTTTATTCAGTGA+TGG - chr7.4:88191788-88191807 MS.gene021744:intron 25.0%
AAATCAATACCTTGTCAAGA+AGG - chr7.4:88191038-88191057 MS.gene021744:CDS 30.0%
AAGAAACGAGAATATATCGA+AGG + chr7.4:88191561-88191580 None:intergenic 30.0%
AATTGTGGAAAGAAAATGGA+TGG - chr7.4:88192643-88192662 MS.gene021744:intron 30.0%
ACAAAATCAATGATATGGCA+GGG - chr7.4:88191267-88191286 MS.gene021744:CDS 30.0%
ACAAGGGAAATTCATTAATC+GGG - chr7.4:88191937-88191956 MS.gene021744:intron 30.0%
AGAGATGCAATAGTATTTGA+TGG + chr7.4:88192706-88192725 None:intergenic 30.0%
ATGGAAATGACATGTTTCAA+AGG - chr7.4:88193055-88193074 MS.gene021744:CDS 30.0%
ATTCTCGTTTCTTACTTTGA+TGG - chr7.4:88191568-88191587 MS.gene021744:intron 30.0%
ATTGTGGAAAGAAAATGGAT+GGG - chr7.4:88192644-88192663 MS.gene021744:intron 30.0%
CAAAGAAGGCTTAAATTATG+TGG - chr7.4:88191418-88191437 MS.gene021744:CDS 30.0%
CAAAGACAAAGAGATTTACA+AGG - chr7.4:88191920-88191939 MS.gene021744:intron 30.0%
CACATAATTTAAGCCTTCTT+TGG + chr7.4:88191420-88191439 None:intergenic 30.0%
CCTATAATATAGACCATTTC+CGG - chr7.4:88191210-88191229 MS.gene021744:CDS 30.0%
CGGAAATGGTCTATATTATA+GGG + chr7.4:88191212-88191231 None:intergenic 30.0%
CTATAATATAGACCATTTCC+GGG - chr7.4:88191211-88191230 MS.gene021744:CDS 30.0%
GAAAGAAAAACAATTTGGAG+TGG - chr7.4:88191465-88191484 MS.gene021744:intron 30.0%
GAAATGGTCTATATTATAGG+GGG + chr7.4:88191210-88191229 None:intergenic 30.0%
GGAAATGGTCTATATTATAG+GGG + chr7.4:88191211-88191230 None:intergenic 30.0%
TACAAAATCAATGATATGGC+AGG - chr7.4:88191266-88191285 MS.gene021744:CDS 30.0%
TATGGAGAATAATCCAACAA+TGG + chr7.4:88192736-88192755 None:intergenic 30.0%
TATTCAGTGATGGCTAAAAT+GGG - chr7.4:88191798-88191817 MS.gene021744:intron 30.0%
TCTACCAAAAGAAAACTCTT+GGG + chr7.4:88192998-88193017 None:intergenic 30.0%
TTATTCAGTGATGGCTAAAA+TGG - chr7.4:88191797-88191816 MS.gene021744:intron 30.0%
TTCATCCTCTTCAAAACAAA+TGG - chr7.4:88192891-88192910 MS.gene021744:intron 30.0%
! AAATTTGCTCCAATTACAAG+GGG - chr7.4:88191330-88191349 MS.gene021744:CDS 30.0%
! CAAAATTTGCTCCAATTACA+AGG - chr7.4:88191328-88191347 MS.gene021744:CDS 30.0%
! CTTGTAATTGGAGCAAATTT+TGG + chr7.4:88191330-88191349 None:intergenic 30.0%
! CTTTTCTCCTTACAAATGAA+GGG + chr7.4:88191521-88191540 None:intergenic 30.0%
! TCTTTTCTCCTTACAAATGA+AGG + chr7.4:88191522-88191541 None:intergenic 30.0%
! TTTGGTTTCTCTGTTTGATT+TGG + chr7.4:88192820-88192839 None:intergenic 30.0%
!! TTTCTCTGTTTGATTTGGAT+TGG + chr7.4:88192815-88192834 None:intergenic 30.0%
!!! AAAACACTGGTTTTCTACAT+AGG - chr7.4:88191966-88191985 MS.gene021744:intron 30.0%
!!! AACCTTTTTTGTAGAGTGAA+TGG - chr7.4:88192593-88192612 MS.gene021744:intron 30.0%
!!! AATGGTATTTTTTCTGTGTG+AGG - chr7.4:88191829-88191848 MS.gene021744:intron 30.0%
!!! ACCTTTTTTGTAGAGTGAAT+GGG - chr7.4:88192594-88192613 MS.gene021744:intron 30.0%
!!! ATGGTATTTTTTCTGTGTGA+GGG - chr7.4:88191830-88191849 MS.gene021744:intron 30.0%
AAAATCAATGATATGGCAGG+GGG - chr7.4:88191269-88191288 MS.gene021744:CDS 35.0%
AAAATGGATGGGTCAAAACT+TGG - chr7.4:88192655-88192674 MS.gene021744:intron 35.0%
AACACATTATGATGTGTCAG+TGG + chr7.4:88191622-88191641 None:intergenic 35.0%
AAGAGGTGAAAAATCCAACT+GGG - chr7.4:88191998-88192017 MS.gene021744:CDS 35.0%
AATCGGGATGAAAAAAACAC+TGG - chr7.4:88191953-88191972 MS.gene021744:intron 35.0%
ACCCATTCACTCTACAAAAA+AGG + chr7.4:88192598-88192617 None:intergenic 35.0%
ATCTCTATTGTCTCCATTGT+TGG - chr7.4:88192720-88192739 MS.gene021744:intron 35.0%
CAAAATCAATGATATGGCAG+GGG - chr7.4:88191268-88191287 MS.gene021744:CDS 35.0%
CAATATTACCATTCCATGTG+TGG + chr7.4:88192093-88192112 None:intergenic 35.0%
CCGGAAATGGTCTATATTAT+AGG + chr7.4:88191213-88191232 None:intergenic 35.0%
CTCTACCAAAAGAAAACTCT+TGG + chr7.4:88192999-88193018 None:intergenic 35.0%
CTGACACATCATAATGTGTT+AGG - chr7.4:88191622-88191641 MS.gene021744:intron 35.0%
CTGGTACTTTGAGCAAATTT+CGG + chr7.4:88191299-88191318 None:intergenic 35.0%
GAAAAGGTCAAATTTGATGC+TGG - chr7.4:88190982-88191001 MS.gene021744:CDS 35.0%
GAAATGACATGTTTCAAAGG+TGG - chr7.4:88193058-88193077 MS.gene021744:CDS 35.0%
GAAATTCCAAAAGCTATCGT+TGG + chr7.4:88193127-88193146 None:intergenic 35.0%
GATATCTCATCTGTGGTATA+TGG - chr7.4:88193036-88193055 MS.gene021744:CDS 35.0%
GCGTAATTGTGGAAAGAAAA+TGG - chr7.4:88192639-88192658 MS.gene021744:intron 35.0%
TAAACCACCCTTCATTTGTA+AGG - chr7.4:88191511-88191530 MS.gene021744:intron 35.0%
TTACAAATGAAGGGTGGTTT+AGG + chr7.4:88191512-88191531 None:intergenic 35.0%
TTTATAAGCTCTTCATCGGT+CGG + chr7.4:88191021-88191040 None:intergenic 35.0%
TTTGTAAGGAGAAAAGAGAG+TGG - chr7.4:88191525-88191544 MS.gene021744:intron 35.0%
! AAATTTGCTCAAAGTACCAG+GGG - chr7.4:88191299-88191318 MS.gene021744:CDS 35.0%
! AATTTGCTCCAATTACAAGG+GGG - chr7.4:88191331-88191350 MS.gene021744:CDS 35.0%
! ACAATTTGGAGTGGTGATTT+CGG - chr7.4:88191474-88191493 MS.gene021744:intron 35.0%
! ATGTTGTCATCTCGTGTTTT+TGG + chr7.4:88192838-88192857 None:intergenic 35.0%
! CAATTGTTGCTTCAGCTAAA+GGG + chr7.4:88192924-88192943 None:intergenic 35.0%
! GAAATTTGCTCAAAGTACCA+GGG - chr7.4:88191298-88191317 MS.gene021744:CDS 35.0%
! TTCTCCCAAGAGTTTTCTTT+TGG - chr7.4:88192991-88193010 MS.gene021744:CDS 35.0%
AATTCACCTGGTAAATCCCA+TGG + chr7.4:88191123-88191142 None:intergenic 40.0%
ACATGTTTCAAAGGTGGTCT+AGG - chr7.4:88193064-88193083 MS.gene021744:CDS 40.0%
ACCAATAGAGCTACTAATGC+TGG - chr7.4:88191879-88191898 MS.gene021744:intron 40.0%
CAACATGACACTAATAGACG+TGG - chr7.4:88191654-88191673 MS.gene021744:intron 40.0%
CAAGAGGTGAAAAATCCAAC+TGG - chr7.4:88191997-88192016 MS.gene021744:CDS 40.0%
CACGTCTATTAGTGTCATGT+TGG + chr7.4:88191656-88191675 None:intergenic 40.0%
CTAAAATGGGAGAAACGGAA+TGG - chr7.4:88191811-88191830 MS.gene021744:intron 40.0%
GAAAATACCCAACTGGTCAA+AGG - chr7.4:88191856-88191875 MS.gene021744:intron 40.0%
GATGGCTAAAATGGGAGAAA+CGG - chr7.4:88191806-88191825 MS.gene021744:intron 40.0%
TATTGGTCCTTTGACCAGTT+GGG + chr7.4:88191866-88191885 None:intergenic 40.0%
TCAGTTTACCCCCTTGTAAT+TGG + chr7.4:88191342-88191361 None:intergenic 40.0%
TGATGAATTCCTGACCATTG+AGG + chr7.4:88192962-88192981 None:intergenic 40.0%
TGATGCTGATATCTCATCTG+TGG - chr7.4:88193029-88193048 MS.gene021744:CDS 40.0%
TGTCATCAACCTTCTTGACA+AGG + chr7.4:88191050-88191069 None:intergenic 40.0%
TTACCATTCCATGTGTGGAT+CGG + chr7.4:88192088-88192107 None:intergenic 40.0%
TTCTCCTTACAAATGAAGGG+TGG + chr7.4:88191518-88191537 None:intergenic 40.0%
TTGTACAGTCAGATGACCTA+GGG + chr7.4:88191251-88191270 None:intergenic 40.0%
TTTGAACCATGGGATTTACC+AGG - chr7.4:88191114-88191133 MS.gene021744:CDS 40.0%
TTTGTACAGTCAGATGACCT+AGG + chr7.4:88191252-88191271 None:intergenic 40.0%
! AATTTGCTCAAAGTACCAGG+GGG - chr7.4:88191300-88191319 MS.gene021744:CDS 40.0%
! ATGCATGAATACCGATTGGA+GGG - chr7.4:88192023-88192042 MS.gene021744:CDS 40.0%
! ATTTGATGGTCCTTCTCTAG+AGG + chr7.4:88192692-88192711 None:intergenic 40.0%
! CAATTTGGAGTGGTGATTTC+GGG - chr7.4:88191475-88191494 MS.gene021744:intron 40.0%
! CAGTTGGATTTTTCACCTCT+TGG + chr7.4:88191999-88192018 None:intergenic 40.0%
! CGAAATTTGCTCAAAGTACC+AGG - chr7.4:88191297-88191316 MS.gene021744:CDS 40.0%
! GCAATTGTTGCTTCAGCTAA+AGG + chr7.4:88192925-88192944 None:intergenic 40.0%
! GTCTTTGAGAAGCGTAATTG+TGG - chr7.4:88192628-88192647 MS.gene021744:intron 40.0%
!!! GGTATTTTGAAACCCGGAAA+TGG + chr7.4:88191226-88191245 None:intergenic 40.0%
AATTCCTGACCATTGAGGCT+TGG + chr7.4:88192957-88192976 None:intergenic 45.0%
AGAGTGAGTTACCCTCCAAT+CGG + chr7.4:88192037-88192056 None:intergenic 45.0%
AGGGACAGAAAATACCCAAC+TGG - chr7.4:88191849-88191868 MS.gene021744:intron 45.0%
ATCGGTTGTGCTCAGGAAAA+AGG + chr7.4:88192070-88192089 None:intergenic 45.0%
CTATTGGTCCTTTGACCAGT+TGG + chr7.4:88191867-88191886 None:intergenic 45.0%
GATTTGTCACCAGCTTCTAC+TGG - chr7.4:88193093-88193112 MS.gene021744:CDS 45.0%
GGTCATGCATGAATACCGAT+TGG - chr7.4:88192019-88192038 MS.gene021744:CDS 45.0%
GTATTCATGCATGACCCAGT+TGG + chr7.4:88192015-88192034 None:intergenic 45.0%
TACATAGGAAGAGCTCCAAG+AGG - chr7.4:88191981-88192000 MS.gene021744:intron 45.0%
TGATTCCAACCAAGCCTCAA+TGG - chr7.4:88192945-88192964 MS.gene021744:intron 45.0%
TGGATGGGTCAAAACTTGGA+AGG - chr7.4:88192659-88192678 MS.gene021744:intron 45.0%
TGTACAGTCAGATGACCTAG+GGG + chr7.4:88191250-88191269 None:intergenic 45.0%
! AGGTCTAACTCCTCTAGAGA+AGG - chr7.4:88192679-88192698 MS.gene021744:intron 45.0%
! CATGCATGAATACCGATTGG+AGG - chr7.4:88192022-88192041 MS.gene021744:CDS 45.0%
! GAGCTACTAATGCTGGCTAT+TGG - chr7.4:88191886-88191905 MS.gene021744:intron 45.0%
! GCCAGCATTAGTAGCTCTAT+TGG + chr7.4:88191883-88191902 None:intergenic 45.0%
! TTGCAGCCAACGATAGCTTT+TGG - chr7.4:88193118-88193137 MS.gene021744:CDS 45.0%
!!! GCAAATTTTGGTTTACCCCC+TGG + chr7.4:88191318-88191337 None:intergenic 45.0%
!!! TTGTTTTTATATAATATTAT+AGG - chr7.4:88191169-88191188 MS.gene021744:CDS 5.0%
ACGTTGTTCGTCGTCCTCTT+TGG + chr7.4:88191366-88191385 None:intergenic 50.0%
CAACCGATCCACACATGGAA+TGG - chr7.4:88192082-88192101 MS.gene021744:CDS 50.0%
GCTGGCTATTGGAAAGCAAC+AGG - chr7.4:88191897-88191916 MS.gene021744:intron 50.0%
GGGGGTAAACTGAACCAAAG+AGG - chr7.4:88191349-88191368 MS.gene021744:CDS 50.0%
GGTTTCAAAATACCCCCCCT+AGG - chr7.4:88191232-88191251 MS.gene021744:CDS 50.0%
GTACAGTCAGATGACCTAGG+GGG + chr7.4:88191249-88191268 None:intergenic 50.0%
TACAGTCAGATGACCTAGGG+GGG + chr7.4:88191248-88191267 None:intergenic 50.0%
!!! AGGGGGGGTATTTTGAAACC+CGG + chr7.4:88191232-88191251 None:intergenic 50.0%
ACAGTCAGATGACCTAGGGG+GGG + chr7.4:88191247-88191266 None:intergenic 55.0%
CCAACCAAGCCTCAATGGTC+AGG - chr7.4:88192950-88192969 MS.gene021744:intron 55.0%
GAGCACAACCGATCCACACA+TGG - chr7.4:88192077-88192096 MS.gene021744:CDS 55.0%
GCTGCAAGTCCAGTAGAAGC+TGG + chr7.4:88193105-88193124 None:intergenic 55.0%
TGTGTGGATCGGTTGTGCTC+AGG + chr7.4:88192077-88192096 None:intergenic 55.0%
! CCTGACCATTGAGGCTTGGT+TGG + chr7.4:88192953-88192972 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 88190940 88193149 88190940 ID=MS.gene021744
chr7.4 mRNA 88190940 88193149 88190940 ID=MS.gene021744.t1;Parent=MS.gene021744
chr7.4 exon 88192954 88193149 88192954 ID=MS.gene021744.t1.exon1;Parent=MS.gene021744.t1
chr7.4 CDS 88192954 88193149 88192954 ID=cds.MS.gene021744.t1;Parent=MS.gene021744.t1
chr7.4 exon 88191986 88192284 88191986 ID=MS.gene021744.t1.exon2;Parent=MS.gene021744.t1
chr7.4 CDS 88191986 88192284 88191986 ID=cds.MS.gene021744.t1;Parent=MS.gene021744.t1
chr7.4 exon 88190940 88191482 88190940 ID=MS.gene021744.t1.exon3;Parent=MS.gene021744.t1
chr7.4 CDS 88190940 88191482 88190940 ID=cds.MS.gene021744.t1;Parent=MS.gene021744.t1
Gene Sequence

>MS.gene021744

ATGGGATCAAATGAGTATGTTTCCAATCAAAAAATGGAAAATGAAAAGGTCAAATTTGATGCTGGTTTTCGATTCTTTCCGACCGATGAAGAGCTTATAAATCAATACCTTGTCAAGAAGGTTGATGACAATAGCTTCTGTGCTATAGCTATTGCTGAAGTTGATATGAATAAGTTTGAACCATGGGATTTACCAGGTGAATTTAATGTTTTTTATAGGCAAATATTAGTTGTTTTTATATAATATTATAGGATTAATAGTGTTTTACCCCCTATAATATAGACCATTTCCGGGTTTCAAAATACCCCCCCTAGGTCATCTGACTGTACAAAATCAATGATATGGCAGGGGGTAAACCGAAATTTGCTCAAAGTACCAGGGGGTAAACCAAAATTTGCTCCAATTACAAGGGGGTAAACTGAACCAAAGAGGACGACGAACAACGTCGTACTAAGACGACGAAATCATAAAAACATACCAAAGAAGGCTTAAATTATGTGGAAGTCACTTATTTATCTAAAAAAAGAAAGAAAAACAATTTGGAGTGGTGATTTCGGGACAAAATTAAACCTAAACCACCCTTCATTTGTAAGGAGAAAAGAGAGTGGTTTAATTACACCTTCGATATATTCTCGTTTCTTACTTTGATGGTTATATGTTTTCTCTTAATTACTATGTACCACTGACACATCATAATGTGTTAGGTATATGCACCAACATGACACTAATAGACGTGGTTAAATTTAATTATTTTATTTTTTAAAGTGATTATGAGTGTCAATTTTGTCAGTGTCATGTCTAATGTATGTATGTCTTTCAACGTTTCATAACTTAATTATGCTTTCTTATTTTTTGGTTTATTCAGTGATGGCTAAAATGGGAGAAACGGAATGGTATTTTTTCTGTGTGAGGGACAGAAAATACCCAACTGGTCAAAGGACCAATAGAGCTACTAATGCTGGCTATTGGAAAGCAACAGGCAAAGACAAAGAGATTTACAAGGGAAATTCATTAATCGGGATGAAAAAAACACTGGTTTTCTACATAGGAAGAGCTCCAAGAGGTGAAAAATCCAACTGGGTCATGCATGAATACCGATTGGAGGGTAACTCACTCTCTAAGCACAACCTTTTTCCTGAGCACAACCGATCCACACATGGAATGGTAATATTGCTATATTTTTTATTACTTTGTTTTTGTCAATGATTTCTACTTTGACTATAGGTGAAAATTTATTAGTGTATGTTCACATCGACCATGTGTTTGATATAATTACGTTATATTACCGTGATTTTGAAAAGATTTTTTTTTTTTAAATTTTAACAAAGTTAGCATTTTATCATTGTCAAACTTATCGTCGATCCAAACAATTACTAAGATCTGTTTGTAACAAATTATAAAAATTTAATTTCCTTTTTCTAAATAAAGTAAACTATTTTATGTTTGATCACCATGATAAATGTAACCTTTATCAAAAAATCAATTATAAAATATAAATTTTAGAGAAACTACTGGAAACAACTTTTTGTTTGAAACATATATAATATTCTTTCAAATAGTATTTTATTTAAAAACACTTTAATAAATGAATGAATACTAAATAATGATAGTGTTTTTTAAATAATGTCTTTTTTCCATTTAATATTAATGTGTAACCTTTTTTGTAGAGTGAATGGGTTGTCACTAGAGTCTTTGAGAAGCGTAATTGTGGAAAGAAAATGGATGGGTCAAAACTTGGAAGGTCTAACTCCTCTAGAGAAGGACCATCAAATACTATTGCATCTCTATTGTCTCCATTGTTGGATTATTCTCCATACAATAGTGAAAATCAAACCACTATTTCTGATTTCTCTAATGTGTTGAATTCATTCACCAATCCAAATCAAACAGAGAAACCAAAAACACGAGATGACAACATTGTTCATAACAATGAAACTAGTATCTTGAACATTTCATCCTCTTCAAAACAAATGGATATTTACCCTTTAGCTGAAGCAACAATTGCTGATTCCAACCAAGCCTCAATGGTCAGGAATTCATCAAACTTTTTCTTCTCCCAAGAGTTTTCTTTTGGTAGAGACTGTAATGCTGATGCTGATATCTCATCTGTGGTATATGGAAATGACATGTTTCAAAGGTGGTCTAGGAATCAAGATTTGTCACCAGCTTCTACTGGACTTGCAGCCAACGATAGCTTTTGGAATTTCTGA
Protein sequence

>MS.gene021744.t1

MGSNEYVSNQKMENEKVKFDAGFRFFPTDEELINQYLVKKVDDNSFCAIAIAEVDMNKFEPWDLPVMAKMGETEWYFFCVRDRKYPTGQRTNRATNAGYWKATGKDKEIYKGNSLIGMKKTLVFYIGRAPRGEKSNWVMHEYRLEGNSLSKHNLFPEHNRSTHGMSEWVVTRVFEKRNCGKKMDGSKLGRSNSSREGPSNTIASLLSPLLDYSPYNSENQTTISDFSNVLNSFTNPNQTEKPKTRDDNIVHNNETSILNISSSSKQMDIYPLAEATIADSNQASMVRNSSNFFFSQEFSFGRDCNADADISSVVYGNDMFQRWSRNQDLSPASTGLAANDSFWNF