Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021901.t1 | XP_024629447.1 | 71.4 | 517 | 144 | 1 | 1 | 517 | 1 | 513 | 4.50E-219 | 770.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021901.t1 | Q9SZL8 | 33.1 | 537 | 340 | 8 | 2 | 531 | 62 | 586 | 6.8e-83 | 309.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021901.t1 | A0A396GJD5 | 71.4 | 517 | 144 | 1 | 1 | 517 | 1 | 513 | 3.2e-219 | 770.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene021901.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021901.t1 | MTR_6g051425 | 87.009 | 331 | 43 | 0 | 1 | 331 | 1 | 331 | 0.0 | 591 |
| MS.gene021901.t1 | MTR_3g465760 | 97.143 | 70 | 2 | 0 | 40 | 109 | 1 | 70 | 4.52e-42 | 145 |
| MS.gene021901.t1 | MTR_4g035820 | 29.819 | 332 | 197 | 11 | 18 | 333 | 76 | 387 | 5.59e-32 | 131 |
| MS.gene021901.t1 | MTR_0558s0020 | 31.076 | 251 | 154 | 6 | 22 | 255 | 41 | 289 | 1.44e-29 | 119 |
| MS.gene021901.t1 | MTR_1g070355 | 32.051 | 234 | 149 | 5 | 25 | 255 | 82 | 308 | 6.48e-29 | 121 |
| MS.gene021901.t1 | MTR_2g039370 | 69.231 | 78 | 20 | 1 | 49 | 126 | 98 | 171 | 1.71e-28 | 115 |
| MS.gene021901.t1 | MTR_6g090505 | 31.579 | 209 | 121 | 4 | 64 | 255 | 21 | 224 | 6.78e-25 | 106 |
| MS.gene021901.t1 | MTR_7g446480 | 32.941 | 170 | 114 | 0 | 105 | 274 | 149 | 318 | 3.17e-24 | 103 |
| MS.gene021901.t1 | MTR_8g446020 | 31.731 | 208 | 124 | 5 | 61 | 255 | 47 | 249 | 4.43e-24 | 102 |
| MS.gene021901.t1 | MTR_7g446520 | 28.185 | 259 | 160 | 4 | 25 | 280 | 96 | 331 | 7.27e-24 | 103 |
| MS.gene021901.t1 | MTR_7g446510 | 32.544 | 169 | 114 | 0 | 105 | 273 | 164 | 332 | 7.96e-23 | 100 |
| MS.gene021901.t1 | MTR_1g083640 | 27.948 | 229 | 146 | 5 | 22 | 233 | 56 | 282 | 2.77e-20 | 91.7 |
| MS.gene021901.t1 | MTR_1g013060 | 26.636 | 214 | 146 | 5 | 13 | 222 | 23 | 229 | 4.17e-19 | 87.0 |
| MS.gene021901.t1 | MTR_5g076070 | 25.551 | 227 | 163 | 4 | 25 | 250 | 61 | 282 | 4.59e-18 | 85.1 |
| MS.gene021901.t1 | MTR_3g450850 | 24.609 | 256 | 171 | 6 | 17 | 263 | 47 | 289 | 1.06e-14 | 76.3 |
| MS.gene021901.t1 | MTR_0402s0040 | 28.736 | 174 | 106 | 6 | 29 | 195 | 38 | 200 | 1.94e-14 | 76.3 |
| MS.gene021901.t1 | MTR_6g022070 | 32.168 | 143 | 93 | 1 | 316 | 458 | 1 | 139 | 3.25e-14 | 74.7 |
| MS.gene021901.t1 | MTR_2g014100 | 30.198 | 202 | 122 | 7 | 22 | 204 | 49 | 250 | 3.86e-13 | 70.1 |
| MS.gene021901.t1 | MTR_1g008290 | 26.316 | 114 | 83 | 1 | 105 | 218 | 32 | 144 | 5.69e-13 | 67.0 |
| MS.gene021901.t1 | MTR_0337s0040 | 26.374 | 182 | 116 | 4 | 61 | 229 | 48 | 224 | 1.26e-11 | 65.1 |
| MS.gene021901.t1 | MTR_2g098920 | 31.579 | 114 | 70 | 3 | 11 | 124 | 77 | 182 | 4.42e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021901.t1 | AT4G38180 | 33.895 | 534 | 340 | 8 | 2 | 531 | 62 | 586 | 6.25e-97 | 312 |
| MS.gene021901.t1 | AT4G15090 | 31.174 | 494 | 321 | 8 | 27 | 513 | 61 | 542 | 5.93e-75 | 254 |
| MS.gene021901.t1 | AT4G15090 | 31.174 | 494 | 321 | 8 | 27 | 513 | 61 | 542 | 5.93e-75 | 254 |
| MS.gene021901.t1 | AT4G15090 | 31.174 | 494 | 321 | 8 | 27 | 513 | 61 | 542 | 5.93e-75 | 254 |
| MS.gene021901.t1 | AT4G15090 | 31.174 | 494 | 321 | 8 | 27 | 513 | 61 | 542 | 5.93e-75 | 254 |
| MS.gene021901.t1 | AT4G15090 | 31.174 | 494 | 321 | 8 | 27 | 513 | 61 | 542 | 5.93e-75 | 254 |
| MS.gene021901.t1 | AT2G27110 | 29.498 | 478 | 302 | 7 | 19 | 495 | 51 | 494 | 3.41e-70 | 242 |
| MS.gene021901.t1 | AT2G27110 | 29.498 | 478 | 302 | 7 | 19 | 495 | 51 | 494 | 3.41e-70 | 242 |
| MS.gene021901.t1 | AT3G22170 | 29.423 | 503 | 307 | 10 | 20 | 505 | 73 | 544 | 2.39e-64 | 226 |
| MS.gene021901.t1 | AT3G22170 | 29.423 | 503 | 307 | 10 | 20 | 505 | 73 | 544 | 2.39e-64 | 226 |
| MS.gene021901.t1 | AT3G06250 | 28.543 | 494 | 298 | 10 | 2 | 493 | 177 | 617 | 1.42e-62 | 219 |
| MS.gene021901.t1 | AT3G06250 | 28.543 | 494 | 298 | 10 | 2 | 493 | 177 | 617 | 1.42e-62 | 219 |
| MS.gene021901.t1 | AT3G06250 | 28.543 | 494 | 298 | 10 | 2 | 493 | 177 | 617 | 1.42e-62 | 219 |
| MS.gene021901.t1 | AT1G76320 | 29.039 | 489 | 330 | 9 | 27 | 513 | 7 | 480 | 1.53e-62 | 218 |
| MS.gene021901.t1 | AT1G76320 | 28.921 | 491 | 332 | 9 | 25 | 513 | 5 | 480 | 4.56e-62 | 218 |
| MS.gene021901.t1 | AT1G76320 | 28.921 | 491 | 332 | 9 | 25 | 513 | 5 | 480 | 4.56e-62 | 218 |
| MS.gene021901.t1 | AT1G76320 | 28.921 | 491 | 332 | 9 | 25 | 513 | 5 | 480 | 5.21e-62 | 218 |
| MS.gene021901.t1 | AT2G27110 | 34.441 | 331 | 212 | 4 | 177 | 506 | 33 | 359 | 1.32e-61 | 216 |
| MS.gene021901.t1 | AT1G52520 | 28.482 | 481 | 324 | 6 | 10 | 490 | 81 | 541 | 3.73e-59 | 209 |
| MS.gene021901.t1 | AT4G19990 | 27.841 | 528 | 319 | 9 | 1 | 508 | 1 | 486 | 1.66e-57 | 206 |
| MS.gene021901.t1 | AT4G19990 | 27.841 | 528 | 319 | 9 | 1 | 508 | 1 | 486 | 1.66e-57 | 206 |
| MS.gene021901.t1 | AT4G19990 | 27.841 | 528 | 319 | 9 | 1 | 508 | 1 | 486 | 2.12e-57 | 205 |
| MS.gene021901.t1 | AT4G19990 | 27.841 | 528 | 319 | 9 | 1 | 508 | 1 | 486 | 2.46e-57 | 205 |
| MS.gene021901.t1 | AT4G19990 | 27.841 | 528 | 319 | 9 | 1 | 508 | 1 | 486 | 2.46e-57 | 205 |
| MS.gene021901.t1 | AT5G18960 | 28.138 | 494 | 300 | 11 | 5 | 495 | 202 | 643 | 3.60e-57 | 205 |
| MS.gene021901.t1 | AT5G18960 | 28.138 | 494 | 300 | 11 | 5 | 495 | 202 | 643 | 3.60e-57 | 205 |
| MS.gene021901.t1 | AT4G19990 | 27.863 | 524 | 316 | 9 | 5 | 508 | 19 | 500 | 7.32e-57 | 204 |
| MS.gene021901.t1 | AT1G80010 | 27.926 | 487 | 329 | 8 | 20 | 496 | 98 | 572 | 1.47e-56 | 202 |
| MS.gene021901.t1 | AT1G10240 | 30.128 | 468 | 297 | 12 | 18 | 472 | 49 | 499 | 2.65e-54 | 196 |
| MS.gene021901.t1 | AT1G10240 | 30.128 | 468 | 297 | 12 | 18 | 472 | 49 | 499 | 2.65e-54 | 196 |
| MS.gene021901.t1 | AT4G19990 | 28.702 | 439 | 268 | 6 | 74 | 508 | 32 | 429 | 3.96e-53 | 192 |
| MS.gene021901.t1 | AT5G28530 | 28.217 | 443 | 286 | 8 | 18 | 439 | 56 | 487 | 6.99e-51 | 186 |
| MS.gene021901.t1 | AT5G28530 | 28.217 | 443 | 286 | 8 | 18 | 439 | 56 | 487 | 6.99e-51 | 186 |
| MS.gene021901.t1 | AT5G28530 | 28.217 | 443 | 286 | 8 | 18 | 439 | 56 | 487 | 8.18e-51 | 186 |
| MS.gene021901.t1 | AT2G32250 | 26.737 | 475 | 299 | 7 | 20 | 493 | 41 | 467 | 8.56e-51 | 187 |
| MS.gene021901.t1 | AT2G32250 | 26.596 | 470 | 296 | 7 | 25 | 493 | 5 | 426 | 1.02e-50 | 186 |
| MS.gene021901.t1 | AT2G32250 | 26.596 | 470 | 296 | 7 | 25 | 493 | 5 | 426 | 1.08e-50 | 186 |
| MS.gene021901.t1 | AT2G32250 | 26.526 | 475 | 300 | 7 | 20 | 493 | 41 | 467 | 1.19e-50 | 187 |
| MS.gene021901.t1 | AT2G32250 | 26.526 | 475 | 300 | 7 | 20 | 493 | 41 | 467 | 1.19e-50 | 187 |
| MS.gene021901.t1 | AT2G32250 | 26.526 | 475 | 300 | 7 | 20 | 493 | 41 | 467 | 1.19e-50 | 187 |
| MS.gene021901.t1 | AT2G32250 | 26.526 | 475 | 300 | 7 | 20 | 493 | 41 | 467 | 1.20e-50 | 187 |
| MS.gene021901.t1 | AT2G32250 | 26.526 | 475 | 300 | 7 | 20 | 493 | 41 | 467 | 1.20e-50 | 187 |
| MS.gene021901.t1 | AT4G38170 | 29.431 | 299 | 204 | 4 | 199 | 495 | 21 | 314 | 5.09e-47 | 173 |
| MS.gene021901.t1 | AT5G28530 | 23.963 | 434 | 253 | 10 | 18 | 439 | 56 | 424 | 2.77e-25 | 110 |
| MS.gene021901.t1 | AT5G28530 | 23.963 | 434 | 253 | 10 | 18 | 439 | 56 | 424 | 3.16e-25 | 110 |
Find 91 sgRNAs with CRISPR-Local
Find 233 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGAATGCACCTTCTCATTT+TGG | 0.108203 | 7.1:-82100928 | MS.gene021901:CDS |
| ACTAATGTTTGGAGTTATTT+AGG | 0.178667 | 7.1:-82101474 | MS.gene021901:CDS |
| TGTATAAAATTCGTCATAAA+TGG | 0.250035 | 7.1:-82100765 | MS.gene021901:CDS |
| CATAAACGGTGACATGTATT+TGG | 0.254781 | 7.1:+82100967 | None:intergenic |
| AAAAGTTTCATGGTTTGTTT+TGG | 0.257014 | 7.1:-82100888 | MS.gene021901:CDS |
| AACTCTGATCAAAAGTTTCA+TGG | 0.276945 | 7.1:-82100898 | MS.gene021901:CDS |
| CCATCTTGAAGCCATGTTCT+TGG | 0.280191 | 7.1:+82101841 | None:intergenic |
| CACGTTTAACCAATGTGTTT+TGG | 0.307246 | 7.1:-82101272 | MS.gene021901:CDS |
| TTTCTCACACTTCCACATAT+TGG | 0.312837 | 7.1:+82098457 | None:intergenic |
| GCGAATTACTAAGTTGATAA+TGG | 0.317295 | 7.1:-82101613 | MS.gene021901:CDS |
| GAAAAGAGTAAATTAATTAA+AGG | 0.318587 | 7.1:-82101384 | MS.gene021901:CDS |
| AAAGTTGATTATGATTGTTT+TGG | 0.323388 | 7.1:-82101234 | MS.gene021901:CDS |
| CATTGGTTAAACGTGATTCT+TGG | 0.328206 | 7.1:+82101280 | None:intergenic |
| AAACTTCTGTTTCTTTCAAT+TGG | 0.330619 | 7.1:-82101089 | MS.gene021901:CDS |
| CATGTCACCGTTTATGCTTA+TGG | 0.342415 | 7.1:-82100960 | MS.gene021901:CDS |
| CTTATTAGCATTTGAAAAGA+TGG | 0.359804 | 7.1:-82100626 | MS.gene021901:CDS |
| TCACCTACGATTTCTCCTTC+TGG | 0.371892 | 7.1:+82101714 | None:intergenic |
| GCAAGTGATTGATTAAAGAT+TGG | 0.373633 | 7.1:+82101352 | None:intergenic |
| CAAGTGATTGATTAAAGATT+GGG | 0.384672 | 7.1:+82101353 | None:intergenic |
| GTATGAAAGTTACTAATGTT+TGG | 0.386893 | 7.1:-82101485 | MS.gene021901:CDS |
| AGACTTTATGAGACCTCCTT+TGG | 0.388927 | 7.1:+82101521 | None:intergenic |
| AGGAGGTCTCATAAAGTCTA+TGG | 0.403748 | 7.1:-82101517 | MS.gene021901:CDS |
| GAAGTACTTCTAAAGACATT+GGG | 0.403994 | 7.1:-82100441 | MS.gene021901:CDS |
| AAAACAATCATAATCAACTT+TGG | 0.409741 | 7.1:+82101236 | None:intergenic |
| ACTTAGACTGGTTGCTGCTC+CGG | 0.416105 | 7.1:+82100654 | None:intergenic |
| CATTTGCAAAATGTCATGTT+TGG | 0.424549 | 7.1:-82101132 | MS.gene021901:CDS |
| CATTACGTCTCCGATTGCTT+TGG | 0.425284 | 7.1:+82100990 | None:intergenic |
| AATGAGTATCTTGCTGGAAC+TGG | 0.425528 | 7.1:-82100466 | MS.gene021901:CDS |
| CTTATCAAAGGGCTGATTCA+AGG | 0.444079 | 7.1:-82101686 | MS.gene021901:CDS |
| ATATTGGAATGGTATTCAAC+TGG | 0.454234 | 7.1:+82098473 | None:intergenic |
| CGATTTAATGTTAGCAAGGA+TGG | 0.456458 | 7.1:-82101642 | MS.gene021901:CDS |
| CTCACTGATATTTATGATGC+GGG | 0.456755 | 7.1:+82100543 | None:intergenic |
| GATTCAAAAGAAGAGTTTGA+AGG | 0.459181 | 7.1:-82100847 | MS.gene021901:CDS |
| TATTTAGGAGAAGAGGTTGG+TGG | 0.461595 | 7.1:-82101459 | MS.gene021901:CDS |
| GTCTCCGATTGCTTTGGCCA+TGG | 0.463672 | 7.1:+82100996 | None:intergenic |
| AGAGTTCTTGCTTCTTCTCA+AGG | 0.471868 | 7.1:-82098424 | MS.gene021901:CDS |
| ATATATGCCATAAGCATAAA+CGG | 0.475933 | 7.1:+82100953 | None:intergenic |
| AGTGTGTTAAGTGCGATTGC+CGG | 0.478839 | 7.1:-82100673 | MS.gene021901:CDS |
| TGATGCGGGGAGGCATACTT+TGG | 0.480707 | 7.1:+82100557 | None:intergenic |
| GTTGGTGGATTTGATAAGCT+TGG | 0.492644 | 7.1:-82101444 | MS.gene021901:CDS |
| GAAGCAAGAACTCTATAAGA+AGG | 0.494328 | 7.1:+82098433 | None:intergenic |
| TGATGATTTACCCCAACAAA+AGG | 0.496863 | 7.1:+82101153 | None:intergenic |
| TTGAATACCATTCCAATATG+TGG | 0.499157 | 7.1:-82098469 | MS.gene021901:CDS |
| TCTTGCTTCTTCTCAAGGAA+AGG | 0.500027 | 7.1:-82098419 | MS.gene021901:CDS |
| AAGAAGAGTTTGAAGGCACT+TGG | 0.500098 | 7.1:-82100840 | MS.gene021901:CDS |
| CAAGAACATGGCTTCAAGAT+GGG | 0.500638 | 7.1:-82101840 | MS.gene021901:CDS |
| GCGCATGAGCAGAAGGATCA+TGG | 0.501604 | 7.1:-82098388 | MS.gene021901:CDS |
| ACAAGCTTCAAAATCACAAA+TGG | 0.503549 | 7.1:-82100798 | MS.gene021901:CDS |
| CCAAGAACATGGCTTCAAGA+TGG | 0.507821 | 7.1:-82101841 | MS.gene021901:CDS |
| AGTTATTTAGGAGAAGAGGT+TGG | 0.508257 | 7.1:-82101462 | MS.gene021901:CDS |
| GGAGCCATGGCCAAAGCAAT+CGG | 0.517653 | 7.1:-82101000 | MS.gene021901:CDS |
| GGAAGTACTTCTAAAGACAT+TGG | 0.522331 | 7.1:-82100442 | MS.gene021901:CDS |
| TTGGAGTTATTTAGGAGAAG+AGG | 0.526196 | 7.1:-82101466 | MS.gene021901:CDS |
| GAGTATCTTGCTGGAACTGG+TGG | 0.526825 | 7.1:-82100463 | MS.gene021901:CDS |
| ATGTTAGCAAGGATGGAGAA+TGG | 0.532233 | 7.1:-82101635 | MS.gene021901:CDS |
| TAGGTGAAGTTGCTTATCAA+AGG | 0.533461 | 7.1:-82101698 | MS.gene021901:CDS |
| AAGAGTAAATTAATTAAAGG+TGG | 0.536645 | 7.1:-82101381 | MS.gene021901:CDS |
| CACACTTCCACATATTGGAA+TGG | 0.537411 | 7.1:+82098462 | None:intergenic |
| AATGGATCACAACCATGCTT+TGG | 0.538091 | 7.1:-82101595 | MS.gene021901:CDS |
| TAATAAGAAATGACTTAGAC+TGG | 0.538323 | 7.1:+82100642 | None:intergenic |
| ATTATTATTGTTCTAAACAA+GGG | 0.540953 | 7.1:-82101752 | MS.gene021901:CDS |
| GATTATTATTGTTCTAAACA+AGG | 0.542483 | 7.1:-82101753 | MS.gene021901:CDS |
| AGGTGAAGTTGCTTATCAAA+GGG | 0.546039 | 7.1:-82101697 | MS.gene021901:CDS |
| TACAGATCAAGATGGAGCCA+TGG | 0.551336 | 7.1:-82101013 | MS.gene021901:CDS |
| TCAAATCATATGTATTAGTA+CGG | 0.557489 | 7.1:+82101184 | None:intergenic |
| GCGACAATTAGAGACTGAAA+AGG | 0.558235 | 7.1:-82100593 | MS.gene021901:CDS |
| ATATGTATTAGTACGGTAAG+TGG | 0.559004 | 7.1:+82101191 | None:intergenic |
| AAGGACAAATTGTAAAGCAA+TGG | 0.564077 | 7.1:-82101667 | MS.gene021901:CDS |
| ATAAAGTCTATGGTGAATGC+TGG | 0.565519 | 7.1:-82101507 | MS.gene021901:CDS |
| GCTCGAGCGGCACCAAAGCA+TGG | 0.565748 | 7.1:+82101583 | None:intergenic |
| TGATCAAGCGCATGAGCAGA+AGG | 0.569915 | 7.1:-82098395 | MS.gene021901:CDS |
| GAATGGTATTCAACTGGAAG+CGG | 0.572146 | 7.1:+82098479 | None:intergenic |
| TGGTCAAGTTGTGCATAGCA+AGG | 0.581013 | 7.1:-82101883 | MS.gene021901:CDS |
| ACCATCTCTCCAAAACACAT+TGG | 0.590535 | 7.1:+82101263 | None:intergenic |
| GGTGCGATTTAATGTTAGCA+AGG | 0.593147 | 7.1:-82101646 | MS.gene021901:CDS |
| TCTCACTGATATTTATGATG+CGG | 0.607441 | 7.1:+82100542 | None:intergenic |
| TTAAGATCACCAAAATGAGA+AGG | 0.607446 | 7.1:+82100919 | None:intergenic |
| CTGCACACTATAGTAGAACA+TGG | 0.618082 | 7.1:+82101308 | None:intergenic |
| TTGAAAAGATGGTAAACAAG+TGG | 0.620155 | 7.1:-82100615 | MS.gene021901:CDS |
| TTTAAGAACAATGAACCAGA+AGG | 0.621796 | 7.1:-82101729 | MS.gene021901:CDS |
| ATGGAGCACTGCATATAGCA+AGG | 0.629512 | 7.1:-82100746 | MS.gene021901:CDS |
| TTCAACTGGAAGCGGTACAG+AGG | 0.635966 | 7.1:+82098487 | None:intergenic |
| GAACCAGAAGGAGAAATCGT+AGG | 0.643994 | 7.1:-82101717 | MS.gene021901:CDS |
| AGAAAAGTATCAGAAACCAA+AGG | 0.645801 | 7.1:-82101537 | MS.gene021901:CDS |
| AACAAATGTCTTTGCTCGAG+CGG | 0.656974 | 7.1:+82101570 | None:intergenic |
| TATAACTTATACCAAGAACA+TGG | 0.669118 | 7.1:-82101852 | MS.gene021901:CDS |
| AAGTACTTCTAAAGACATTG+GGG | 0.673250 | 7.1:-82100440 | MS.gene021901:CDS |
| CTGATATTTATGATGCGGGG+AGG | 0.680172 | 7.1:+82100547 | None:intergenic |
| AAAGTATCAGAAACCAAAGG+AGG | 0.690747 | 7.1:-82101534 | MS.gene021901:CDS |
| TCACTGATATTTATGATGCG+GGG | 0.700675 | 7.1:+82100544 | None:intergenic |
| CATGAGCAGAAGGATCATGG+AGG | 0.767436 | 7.1:-82098385 | MS.gene021901:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTTGTATTAAAAATTTCTA+AGG | + | chr7.1:82101472-82101491 | None:intergenic | 15.0% |
| !! | GAAAAGAGTAAATTAATTAA+AGG | - | chr7.1:82098927-82098946 | MS.gene021901:intron | 15.0% |
| !!! | AAAAATGTTTTTGTTTTTGT+TGG | - | chr7.1:82100319-82100338 | MS.gene021901:intron | 15.0% |
| !!! | AACAAAAACAAAAACATTTT+TGG | + | chr7.1:82100320-82100339 | None:intergenic | 15.0% |
| !!! | ATGTTTTTTGATTAAATTCT+TGG | + | chr7.1:82100976-82100995 | None:intergenic | 15.0% |
| !!! | ATTATTATTGTTCTAAACAA+GGG | - | chr7.1:82098559-82098578 | MS.gene021901:intron | 15.0% |
| !!! | TTGATTTTAAGTTTGAAAAT+TGG | - | chr7.1:82100342-82100361 | MS.gene021901:intron | 15.0% |
| !!! | TTTTATTTTAGTTGAATTGA+AGG | - | chr7.1:82100237-82100256 | MS.gene021901:intron | 15.0% |
| !! | AAAACAATCATAATCAACTT+TGG | + | chr7.1:82099078-82099097 | None:intergenic | 20.0% |
| !! | AAATGAAAAAGAAAATTCGA+TGG | - | chr7.1:82100481-82100500 | MS.gene021901:CDS | 20.0% |
| !! | AAGAAAAAATAAGATATCAC+CGG | + | chr7.1:82100001-82100020 | None:intergenic | 20.0% |
| !! | AAGAGTAAATTAATTAAAGG+TGG | - | chr7.1:82098930-82098949 | MS.gene021901:intron | 20.0% |
| !! | AATGAAAAAGAAAATTCGAT+GGG | - | chr7.1:82100482-82100501 | MS.gene021901:CDS | 20.0% |
| !! | GAAAGATTACTAAAATTCTA+AGG | - | chr7.1:82101011-82101030 | MS.gene021901:CDS | 20.0% |
| !! | GTGTTAAATAAAGTGTAAAT+AGG | + | chr7.1:82101152-82101171 | None:intergenic | 20.0% |
| !! | TCAAATCATATGTATTAGTA+CGG | + | chr7.1:82099130-82099149 | None:intergenic | 20.0% |
| !! | TGTATAAAATTCGTCATAAA+TGG | - | chr7.1:82099546-82099565 | MS.gene021901:intron | 20.0% |
| !!! | AAAGTTGATTATGATTGTTT+TGG | - | chr7.1:82099077-82099096 | MS.gene021901:intron | 20.0% |
| !!! | GATTATTATTGTTCTAAACA+AGG | - | chr7.1:82098558-82098577 | MS.gene021901:intron | 20.0% |
| !!! | GTGATATCTTATTTTTTCTT+GGG | - | chr7.1:82100001-82100020 | MS.gene021901:intron | 20.0% |
| !!! | TAATGTTTTATCTTGGTTTT+CGG | - | chr7.1:82099940-82099959 | MS.gene021901:intron | 20.0% |
| !!! | TGATCTGTAAAAAATGTTTT+TGG | + | chr7.1:82099287-82099306 | None:intergenic | 20.0% |
| ! | AATTAGTCATTTGCAAAATG+TGG | - | chr7.1:82100421-82100440 | MS.gene021901:CDS | 25.0% |
| ! | ACTACTTTCTTAATAAACCT+TGG | + | chr7.1:82100518-82100537 | None:intergenic | 25.0% |
| ! | AGAAAATCCACTTATTTACA+CGG | - | chr7.1:82101173-82101192 | MS.gene021901:CDS | 25.0% |
| ! | ATATATGCCATAAGCATAAA+CGG | + | chr7.1:82099361-82099380 | None:intergenic | 25.0% |
| ! | CAAGTGATTGATTAAAGATT+GGG | + | chr7.1:82098961-82098980 | None:intergenic | 25.0% |
| ! | CTACTTTCTTAATAAACCTT+GGG | + | chr7.1:82100517-82100536 | None:intergenic | 25.0% |
| ! | CTTATTAGCATTTGAAAAGA+TGG | - | chr7.1:82099685-82099704 | MS.gene021901:intron | 25.0% |
| ! | GAAAACCAAGATAAAACATT+AGG | + | chr7.1:82099941-82099960 | None:intergenic | 25.0% |
| ! | GAAAATAAAGCTAAAGTTGA+AGG | - | chr7.1:82100837-82100856 | MS.gene021901:CDS | 25.0% |
| ! | GTATGAAAGTTACTAATGTT+TGG | - | chr7.1:82098826-82098845 | MS.gene021901:intron | 25.0% |
| ! | TAATAAGAAATGACTTAGAC+TGG | + | chr7.1:82099672-82099691 | None:intergenic | 25.0% |
| ! | TATAACTTATACCAAGAACA+TGG | - | chr7.1:82098459-82098478 | MS.gene021901:CDS | 25.0% |
| ! | TGTAAAATAAAGTGAACCAA+AGG | - | chr7.1:82101341-82101360 | MS.gene021901:CDS | 25.0% |
| !! | AAACTTCTGTTTCTTTCAAT+TGG | - | chr7.1:82099222-82099241 | MS.gene021901:intron | 25.0% |
| !! | ACTAATGTTTGGAGTTATTT+AGG | - | chr7.1:82098837-82098856 | MS.gene021901:intron | 25.0% |
| !! | ATATGCCTAATGTTTTATCT+TGG | - | chr7.1:82099933-82099952 | MS.gene021901:intron | 25.0% |
| !! | GTGGAATTTTTACATAAAAG+AGG | - | chr7.1:82101623-82101642 | MS.gene021901:CDS | 25.0% |
| !! | TTTTTCTAAGTGTAAATCCT+AGG | - | chr7.1:82100574-82100593 | MS.gene021901:CDS | 25.0% |
| !!! | AAAAGTTTCATGGTTTGTTT+TGG | - | chr7.1:82099423-82099442 | MS.gene021901:intron | 25.0% |
| !!! | AAAATTCTAAGGCAAAACTA+AGG | - | chr7.1:82101022-82101041 | MS.gene021901:CDS | 25.0% |
| !!! | AATGTTTTATCTTGGTTTTC+GGG | - | chr7.1:82099941-82099960 | MS.gene021901:intron | 25.0% |
| !!! | ACATTTTTTACAGATCAAGA+TGG | - | chr7.1:82099290-82099309 | MS.gene021901:intron | 25.0% |
| !!! | ATCTTATTTTTTCTTGGGAA+GGG | - | chr7.1:82100006-82100025 | MS.gene021901:intron | 25.0% |
| !!! | GATGTTGTTCACATTTTTTT+TGG | - | chr7.1:82100544-82100563 | MS.gene021901:CDS | 25.0% |
| !!! | GGTGATATCTTATTTTTTCT+TGG | - | chr7.1:82100000-82100019 | MS.gene021901:intron | 25.0% |
| !!! | TATCTTATTTTTTCTTGGGA+AGG | - | chr7.1:82100005-82100024 | MS.gene021901:intron | 25.0% |
| !!! | TTGGCTATTTAAAGTGTTTT+TGG | - | chr7.1:82099241-82099260 | MS.gene021901:intron | 25.0% |
| AAATTAAAGACGGTTCCTAT+AGG | + | chr7.1:82100119-82100138 | None:intergenic | 30.0% | |
| AACTCTGATCAAAAGTTTCA+TGG | - | chr7.1:82099413-82099432 | MS.gene021901:intron | 30.0% | |
| AAGGACAAATTGTAAAGCAA+TGG | - | chr7.1:82098644-82098663 | MS.gene021901:intron | 30.0% | |
| AAGTTAGAATGTAAAAGCCT+AGG | + | chr7.1:82100797-82100816 | None:intergenic | 30.0% | |
| AATCATGATGTGAGAAATCA+AGG | - | chr7.1:82101090-82101109 | MS.gene021901:CDS | 30.0% | |
| ACAAGCTTCAAAATCACAAA+TGG | - | chr7.1:82099513-82099532 | MS.gene021901:intron | 30.0% | |
| AGAGTTTCTAAGTGAAGAAT+TGG | - | chr7.1:82100192-82100211 | MS.gene021901:intron | 30.0% | |
| AGTAAAGTACAAGAATTCCT+AGG | - | chr7.1:82100777-82100796 | MS.gene021901:CDS | 30.0% | |
| ATAGGATACTATAGTCGTTA+TGG | + | chr7.1:82100101-82100120 | None:intergenic | 30.0% | |
| ATATGCTCATGAAACATGAA+AGG | - | chr7.1:82100865-82100884 | MS.gene021901:CDS | 30.0% | |
| ATATGTATTAGTACGGTAAG+TGG | + | chr7.1:82099123-82099142 | None:intergenic | 30.0% | |
| ATATTGGAATGGTATTCAAC+TGG | + | chr7.1:82101841-82101860 | None:intergenic | 30.0% | |
| ATCATGATGTGAGAAATCAA+GGG | - | chr7.1:82101091-82101110 | MS.gene021901:CDS | 30.0% | |
| CAAACATACATCAAATCAAG+AGG | - | chr7.1:82101230-82101249 | MS.gene021901:CDS | 30.0% | |
| CATTTGCAAAATGTCATGTT+TGG | - | chr7.1:82099179-82099198 | MS.gene021901:intron | 30.0% | |
| GATTCAAAAGAAGAGTTTGA+AGG | - | chr7.1:82099464-82099483 | MS.gene021901:intron | 30.0% | |
| GCAAGTGATTGATTAAAGAT+TGG | + | chr7.1:82098962-82098981 | None:intergenic | 30.0% | |
| GCATGTTTAGATGTATGTTT+AGG | + | chr7.1:82100620-82100639 | None:intergenic | 30.0% | |
| TAACGACTATAGTATCCTAT+AGG | - | chr7.1:82100101-82100120 | MS.gene021901:intron | 30.0% | |
| TAGGATACTATAGTCGTTAT+GGG | + | chr7.1:82100100-82100119 | None:intergenic | 30.0% | |
| TCATGAAACATGAAAGGAAA+GGG | - | chr7.1:82100871-82100890 | MS.gene021901:CDS | 30.0% | |
| TCTCACTGATATTTATGATG+CGG | + | chr7.1:82099772-82099791 | None:intergenic | 30.0% | |
| TCTTCACTTAGAAACTCTTA+GGG | + | chr7.1:82100190-82100209 | None:intergenic | 30.0% | |
| TGACCAAGAAAAATATCTCT+GGG | + | chr7.1:82098414-82098433 | None:intergenic | 30.0% | |
| TTAAGATCACCAAAATGAGA+AGG | + | chr7.1:82099395-82099414 | None:intergenic | 30.0% | |
| TTCTTCACTTAGAAACTCTT+AGG | + | chr7.1:82100191-82100210 | None:intergenic | 30.0% | |
| TTGAAAAGATGGTAAACAAG+TGG | - | chr7.1:82099696-82099715 | MS.gene021901:intron | 30.0% | |
| TTGAATACCATTCCAATATG+TGG | - | chr7.1:82101842-82101861 | MS.gene021901:CDS | 30.0% | |
| TTGACCAAGAAAAATATCTC+TGG | + | chr7.1:82098415-82098434 | None:intergenic | 30.0% | |
| TTTAAGAACAATGAACCAGA+AGG | - | chr7.1:82098582-82098601 | MS.gene021901:intron | 30.0% | |
| TTTCTAAGTGAAGAATTGGA+GGG | - | chr7.1:82100196-82100215 | MS.gene021901:intron | 30.0% | |
| ! | AAATTTTCTTGTAGCTTCCT+TGG | + | chr7.1:82101603-82101622 | None:intergenic | 30.0% |
| ! | AAGAAAATTCGATGGGATTT+TGG | - | chr7.1:82100489-82100508 | MS.gene021901:CDS | 30.0% |
| ! | AAGTACTTCTAAAGACATTG+GGG | - | chr7.1:82099871-82099890 | MS.gene021901:intron | 30.0% |
| ! | ATGGTCTTGCAAGAATTTAA+AGG | - | chr7.1:82100748-82100767 | MS.gene021901:CDS | 30.0% |
| ! | CTTTTTACCGTGTAAATAAG+TGG | + | chr7.1:82101183-82101202 | None:intergenic | 30.0% |
| ! | GAAGTACTTCTAAAGACATT+GGG | - | chr7.1:82099870-82099889 | MS.gene021901:intron | 30.0% |
| ! | TTTTTGAATGAGTATCTTGC+TGG | - | chr7.1:82099839-82099858 | MS.gene021901:intron | 30.0% |
| !! | AACTCTAAAAAAAAGTGCCA+AGG | - | chr7.1:82101583-82101602 | MS.gene021901:CDS | 30.0% |
| !! | ACATTTTTGGAAGAGAACTA+CGG | + | chr7.1:82100307-82100326 | None:intergenic | 30.0% |
| !! | AGAAAAGTATCAGAAACCAA+AGG | - | chr7.1:82098774-82098793 | MS.gene021901:intron | 30.0% |
| !! | ATGTTTTATCTTGGTTTTCG+GGG | - | chr7.1:82099942-82099961 | MS.gene021901:intron | 30.0% |
| !! | GCGAATTACTAAGTTGATAA+TGG | - | chr7.1:82098698-82098717 | MS.gene021901:intron | 30.0% |
| !! | GGATTTTGAAGAATAGAAAG+AGG | - | chr7.1:82100363-82100382 | MS.gene021901:intron | 30.0% |
| !! | TAAGATATCACCGGTTTAAA+AGG | + | chr7.1:82099992-82100011 | None:intergenic | 30.0% |
| AAAATCAGCAACACACACAA+AGG | - | chr7.1:82101707-82101726 | MS.gene021901:CDS | 35.0% | |
| AGGAAAACCATGTTACTAGT+AGG | - | chr7.1:82101748-82101767 | MS.gene021901:CDS | 35.0% | |
| AGGTGAAGTTGCTTATCAAA+GGG | - | chr7.1:82098614-82098633 | MS.gene021901:intron | 35.0% | |
| AGTTATTTAGGAGAAGAGGT+TGG | - | chr7.1:82098849-82098868 | MS.gene021901:intron | 35.0% | |
| ATAAAGTCTATGGTGAATGC+TGG | - | chr7.1:82098804-82098823 | MS.gene021901:intron | 35.0% | |
| CAAGACCATAGAATGTATCT+AGG | + | chr7.1:82100737-82100756 | None:intergenic | 35.0% | |
| CATAAACGGTGACATGTATT+TGG | + | chr7.1:82099347-82099366 | None:intergenic | 35.0% | |
| CATGAAACATGAAAGGAAAG+GGG | - | chr7.1:82100872-82100891 | MS.gene021901:CDS | 35.0% | |
| CCGAAGTAGGTGAATTAATT+CGG | + | chr7.1:82101531-82101550 | None:intergenic | 35.0% | |
| CCGAATTAATTCACCTACTT+CGG | - | chr7.1:82101528-82101547 | MS.gene021901:CDS | 35.0% | |
| CGATTTAATGTTAGCAAGGA+TGG | - | chr7.1:82098669-82098688 | MS.gene021901:intron | 35.0% | |
| CTCACTGATATTTATGATGC+GGG | + | chr7.1:82099771-82099790 | None:intergenic | 35.0% | |
| CTCATGAAACATGAAAGGAA+AGG | - | chr7.1:82100870-82100889 | MS.gene021901:CDS | 35.0% | |
| GAAGCAAGAACTCTATAAGA+AGG | + | chr7.1:82101881-82101900 | None:intergenic | 35.0% | |
| GGAAGCTACAAGAAAATTTG+TGG | - | chr7.1:82101604-82101623 | MS.gene021901:CDS | 35.0% | |
| GTATGTTTAGATGAATGCCT+AGG | + | chr7.1:82100594-82100613 | None:intergenic | 35.0% | |
| GTTTCTAAGTGAAGAATTGG+AGG | - | chr7.1:82100195-82100214 | MS.gene021901:intron | 35.0% | |
| TACATAAAAGAGGACATGCA+GGG | - | chr7.1:82101633-82101652 | MS.gene021901:CDS | 35.0% | |
| TAGGTGAAGTTGCTTATCAA+AGG | - | chr7.1:82098613-82098632 | MS.gene021901:intron | 35.0% | |
| TATCTAGGCCAATGATGTAA+AGG | + | chr7.1:82100722-82100741 | None:intergenic | 35.0% | |
| TCACTGATATTTATGATGCG+GGG | + | chr7.1:82099770-82099789 | None:intergenic | 35.0% | |
| TCCATTGTCCTTTACATCAT+TGG | - | chr7.1:82100711-82100730 | MS.gene021901:CDS | 35.0% | |
| TGATGATTTACCCCAACAAA+AGG | + | chr7.1:82099161-82099180 | None:intergenic | 35.0% | |
| TTACATAAAAGAGGACATGC+AGG | - | chr7.1:82101632-82101651 | MS.gene021901:CDS | 35.0% | |
| TTGGAGTTATTTAGGAGAAG+AGG | - | chr7.1:82098845-82098864 | MS.gene021901:intron | 35.0% | |
| TTTCTCACACTTCCACATAT+TGG | + | chr7.1:82101857-82101876 | None:intergenic | 35.0% | |
| ! | AAAGTATCAGAAACCAAAGG+AGG | - | chr7.1:82098777-82098796 | MS.gene021901:intron | 35.0% |
| ! | AACCAAAGGCACACAAAATA+TGG | - | chr7.1:82101355-82101374 | MS.gene021901:CDS | 35.0% |
| ! | AAGCCCAGAGATATTTTTCT+TGG | - | chr7.1:82098408-82098427 | MS.gene021901:CDS | 35.0% |
| ! | ACAAAACCTAGTGCACTTTT+TGG | + | chr7.1:82101324-82101343 | None:intergenic | 35.0% |
| ! | ATTGGCCTAGATACATTCTA+TGG | - | chr7.1:82100729-82100748 | MS.gene021901:CDS | 35.0% |
| ! | CACGTTTAACCAATGTGTTT+TGG | - | chr7.1:82099039-82099058 | MS.gene021901:intron | 35.0% |
| ! | CATTGGTTAAACGTGATTCT+TGG | + | chr7.1:82099034-82099053 | None:intergenic | 35.0% |
| ! | TGATATGTGCTCCTTTTGTT+GGG | - | chr7.1:82099147-82099166 | MS.gene021901:intron | 35.0% |
| ! | TGCGTTTGAACCTTTTAAAC+CGG | - | chr7.1:82099979-82099998 | MS.gene021901:intron | 35.0% |
| ! | TTGATATGTGCTCCTTTTGT+TGG | - | chr7.1:82099146-82099165 | MS.gene021901:intron | 35.0% |
| ! | TTTTAGTGTGAGAAAAGGGA+AGG | - | chr7.1:82098494-82098513 | MS.gene021901:CDS | 35.0% |
| !! | ATGGGTTTTAGTGTGAGAAA+AGG | - | chr7.1:82098489-82098508 | MS.gene021901:CDS | 35.0% |
| !! | GGAAGTACTTCTAAAGACAT+TGG | - | chr7.1:82099869-82099888 | MS.gene021901:intron | 35.0% |
| !! | TATTGATTTCGATCCGAAGT+AGG | + | chr7.1:82101544-82101563 | None:intergenic | 35.0% |
| !! | TGGGTTTTAGTGTGAGAAAA+GGG | - | chr7.1:82098490-82098509 | MS.gene021901:CDS | 35.0% |
| !!! | AAAGTGTTTTTGGAGAGCAT+GGG | - | chr7.1:82099251-82099270 | MS.gene021901:intron | 35.0% |
| !!! | GTGTTGCTGATTTTGTTTTG+TGG | + | chr7.1:82101701-82101720 | None:intergenic | 35.0% |
| !!! | TAAAGTGTTTTTGGAGAGCA+TGG | - | chr7.1:82099250-82099269 | MS.gene021901:intron | 35.0% |
| !!! | TGATTGTTTTGGAGATGTTG+TGG | - | chr7.1:82099088-82099107 | MS.gene021901:intron | 35.0% |
| !!! | TTGTTTTGGAAATGCATGTC+AGG | - | chr7.1:82099437-82099456 | MS.gene021901:intron | 35.0% |
| AACAAATGTCTTTGCTCGAG+CGG | + | chr7.1:82098744-82098763 | None:intergenic | 40.0% | |
| AAGAATAGAAAGAGGCCTCA+AGG | - | chr7.1:82100371-82100390 | MS.gene021901:intron | 40.0% | |
| AATGAGTATCTTGCTGGAAC+TGG | - | chr7.1:82099845-82099864 | MS.gene021901:intron | 40.0% | |
| AATGGATCACAACCATGCTT+TGG | - | chr7.1:82098716-82098735 | MS.gene021901:intron | 40.0% | |
| ACATAAAAGAGGACATGCAG+GGG | - | chr7.1:82101634-82101653 | MS.gene021901:CDS | 40.0% | |
| ACCATCTCTCCAAAACACAT+TGG | + | chr7.1:82099051-82099070 | None:intergenic | 40.0% | |
| ACCCTTGATGTGAGGATTAT+AGG | + | chr7.1:82101048-82101067 | None:intergenic | 40.0% | |
| AGAATAGAAAGAGGCCTCAA+GGG | - | chr7.1:82100372-82100391 | MS.gene021901:intron | 40.0% | |
| AGACTTTATGAGACCTCCTT+TGG | + | chr7.1:82098793-82098812 | None:intergenic | 40.0% | |
| AGAGTTCTTGCTTCTTCTCA+AGG | - | chr7.1:82101887-82101906 | MS.gene021901:CDS | 40.0% | |
| AGGAGGTCTCATAAAGTCTA+TGG | - | chr7.1:82098794-82098813 | MS.gene021901:intron | 40.0% | |
| ATGTTAGCAAGGATGGAGAA+TGG | - | chr7.1:82098676-82098695 | MS.gene021901:intron | 40.0% | |
| CAAGAACATGGCTTCAAGAT+GGG | - | chr7.1:82098471-82098490 | MS.gene021901:CDS | 40.0% | |
| CACACTTCCACATATTGGAA+TGG | + | chr7.1:82101852-82101871 | None:intergenic | 40.0% | |
| CATGTCACCGTTTATGCTTA+TGG | - | chr7.1:82099351-82099370 | MS.gene021901:intron | 40.0% | |
| CTGCACACTATAGTAGAACA+TGG | + | chr7.1:82099006-82099025 | None:intergenic | 40.0% | |
| GAAATGTTACCCTTGATGTG+AGG | + | chr7.1:82101056-82101075 | None:intergenic | 40.0% | |
| GAATGGTATTCAACTGGAAG+CGG | + | chr7.1:82101835-82101854 | None:intergenic | 40.0% | |
| GCCAATGATGTAAAGGACAA+TGG | + | chr7.1:82100715-82100734 | None:intergenic | 40.0% | |
| GCCTATAATCCTCACATCAA+GGG | - | chr7.1:82101044-82101063 | MS.gene021901:CDS | 40.0% | |
| GCGACAATTAGAGACTGAAA+AGG | - | chr7.1:82099718-82099737 | MS.gene021901:intron | 40.0% | |
| GCGATCTTGGATCATGATTT+CGG | + | chr7.1:82101300-82101319 | None:intergenic | 40.0% | |
| GGTGCGATTTAATGTTAGCA+AGG | - | chr7.1:82098665-82098684 | MS.gene021901:intron | 40.0% | |
| GTGGATTTGATCCCTTAAAC+GGG | + | chr7.1:82100285-82100304 | None:intergenic | 40.0% | |
| TATTTAGGAGAAGAGGTTGG+TGG | - | chr7.1:82098852-82098871 | MS.gene021901:intron | 40.0% | |
| TCTTGCTTCTTCTCAAGGAA+AGG | - | chr7.1:82101892-82101911 | MS.gene021901:CDS | 40.0% | |
| ! | AGTAACATGGTTTTCCTCTC+AGG | + | chr7.1:82101745-82101764 | None:intergenic | 40.0% |
| ! | ATGGTTTTCCTCTCAGGTAT+GGG | + | chr7.1:82101739-82101758 | None:intergenic | 40.0% |
| ! | CAGAATGCACCTTCTCATTT+TGG | - | chr7.1:82099383-82099402 | MS.gene021901:intron | 40.0% |
| ! | CGATACTTGTCATTTGCTTG+TGG | + | chr7.1:82101421-82101440 | None:intergenic | 40.0% |
| ! | CTTATCAAAGGGCTGATTCA+AGG | - | chr7.1:82098625-82098644 | MS.gene021901:intron | 40.0% |
| ! | GATATGTGCTCCTTTTGTTG+GGG | - | chr7.1:82099148-82099167 | MS.gene021901:intron | 40.0% |
| ! | GGTGGATTTGATCCCTTAAA+CGG | + | chr7.1:82100286-82100305 | None:intergenic | 40.0% |
| ! | TGCCATATTTTGTGTGCCTT+TGG | + | chr7.1:82101360-82101379 | None:intergenic | 40.0% |
| ! | TGGAGGGAGAAGAATGTTTT+TGG | - | chr7.1:82100212-82100231 | MS.gene021901:intron | 40.0% |
| !! | AAGAAGAGTTTGAAGGCACT+TGG | - | chr7.1:82099471-82099490 | MS.gene021901:intron | 40.0% |
| !! | GTTGGTGGATTTGATAAGCT+TGG | - | chr7.1:82098867-82098886 | MS.gene021901:intron | 40.0% |
| !! | TTTTTGGAAGAGAACTACGG+TGG | + | chr7.1:82100304-82100323 | None:intergenic | 40.0% |
| !!! | ACCAATGTGTTTTGGAGAGA+TGG | - | chr7.1:82099047-82099066 | MS.gene021901:intron | 40.0% |
| AGCAAAACCCTTGAGAATCG+AGG | - | chr7.1:82100037-82100056 | MS.gene021901:intron | 45.0% | |
| AGTGATGTGTGTGCATGTGT+CGG | - | chr7.1:82100661-82100680 | MS.gene021901:CDS | 45.0% | |
| AGTGTGTTAAGTGCGATTGC+CGG | - | chr7.1:82099638-82099657 | MS.gene021901:intron | 45.0% | |
| CATAAAAGAGGACATGCAGG+GGG | - | chr7.1:82101635-82101654 | MS.gene021901:CDS | 45.0% | |
| CATGAGGTTGGGAAATTGTG+AGG | - | chr7.1:82100395-82100414 | MS.gene021901:intron | 45.0% | |
| CATTACGTCTCCGATTGCTT+TGG | + | chr7.1:82099324-82099343 | None:intergenic | 45.0% | |
| CCAAGAACATGGCTTCAAGA+TGG | - | chr7.1:82098470-82098489 | MS.gene021901:CDS | 45.0% | |
| CCATCTTGAAGCCATGTTCT+TGG | + | chr7.1:82098473-82098492 | None:intergenic | 45.0% | |
| CTGATATTTATGATGCGGGG+AGG | + | chr7.1:82099767-82099786 | None:intergenic | 45.0% | |
| GAACCAGAAGGAGAAATCGT+AGG | - | chr7.1:82098594-82098613 | MS.gene021901:intron | 45.0% | |
| GCGCGCGTAGAAATTAAAGA+CGG | + | chr7.1:82100129-82100148 | None:intergenic | 45.0% | |
| GGCCTATAATCCTCACATCA+AGG | - | chr7.1:82101043-82101062 | MS.gene021901:CDS | 45.0% | |
| TACAGATCAAGATGGAGCCA+TGG | - | chr7.1:82099298-82099317 | MS.gene021901:intron | 45.0% | |
| TCACCTACGATTTCTCCTTC+TGG | + | chr7.1:82098600-82098619 | None:intergenic | 45.0% | |
| TTGCCTACGTACCCGTTTAA+GGG | - | chr7.1:82100271-82100290 | MS.gene021901:intron | 45.0% | |
| ! | ATCGCTCCAAAAAGTGCACT+AGG | - | chr7.1:82101315-82101334 | MS.gene021901:CDS | 45.0% |
| ! | CATGGTTTTCCTCTCAGGTA+TGG | + | chr7.1:82101740-82101759 | None:intergenic | 45.0% |
| ! | GCGTGTTCGTAAAGCTTTGA+TGG | + | chr7.1:82101794-82101813 | None:intergenic | 45.0% |
| ! | TGGTCAAGTTGTGCATAGCA+AGG | - | chr7.1:82098428-82098447 | MS.gene021901:CDS | 45.0% |
| !! | ATGGAGCACTGCATATAGCA+AGG | - | chr7.1:82099565-82099584 | MS.gene021901:intron | 45.0% |
| !!! | TGCACTTTTTGGAGCGATCT+TGG | + | chr7.1:82101313-82101332 | None:intergenic | 45.0% |
| AACCCTTGAGAATCGAGGTC+CGG | - | chr7.1:82100042-82100061 | MS.gene021901:intron | 50.0% | |
| ACCATGTTACTAGTAGGCGC+AGG | - | chr7.1:82101754-82101773 | MS.gene021901:CDS | 50.0% | |
| CATGAGCAGAAGGATCATGG+AGG | - | chr7.1:82101926-82101945 | MS.gene021901:CDS | 50.0% | |
| CTTAAACGGGTACGTAGGCA+AGG | + | chr7.1:82100272-82100291 | None:intergenic | 50.0% | |
| CTTGCCTACGTACCCGTTTA+AGG | - | chr7.1:82100270-82100289 | MS.gene021901:intron | 50.0% | |
| GAGTATCTTGCTGGAACTGG+TGG | - | chr7.1:82099848-82099867 | MS.gene021901:intron | 50.0% | |
| GATCCCTTAAACGGGTACGT+AGG | + | chr7.1:82100277-82100296 | None:intergenic | 50.0% | |
| TCCTGCGCCTACTAGTAACA+TGG | + | chr7.1:82101758-82101777 | None:intergenic | 50.0% | |
| TGATCAAGCGCATGAGCAGA+AGG | - | chr7.1:82101916-82101935 | MS.gene021901:CDS | 50.0% | |
| TTCAACTGGAAGCGGTACAG+AGG | + | chr7.1:82101827-82101846 | None:intergenic | 50.0% | |
| TTTCCTCTCAGGTATGGGCT+TGG | + | chr7.1:82101734-82101753 | None:intergenic | 50.0% | |
| ! | ACTTAGACTGGTTGCTGCTC+CGG | + | chr7.1:82099660-82099679 | None:intergenic | 50.0% |
| ! | CGATGGGATTTTGGATCCCA+AGG | - | chr7.1:82100498-82100517 | MS.gene021901:CDS | 50.0% |
| !! | GAGTTGTTTTCGCTACGGGA+AGG | - | chr7.1:82100065-82100084 | MS.gene021901:intron | 50.0% |
| !! | TCCGGGAGTTGTTTTCGCTA+CGG | - | chr7.1:82100060-82100079 | MS.gene021901:intron | 50.0% |
| !! | TTTCGCTACGGGAAGGTGTT+AGG | - | chr7.1:82100072-82100091 | MS.gene021901:intron | 50.0% |
| ACCCTTGAGAATCGAGGTCC+GGG | - | chr7.1:82100043-82100062 | MS.gene021901:intron | 55.0% | |
| CCCGTAGCGAAAACAACTCC+CGG | + | chr7.1:82100064-82100083 | None:intergenic | 55.0% | |
| GCGCATGAGCAGAAGGATCA+TGG | - | chr7.1:82101923-82101942 | MS.gene021901:CDS | 55.0% | |
| GGAGCCATGGCCAAAGCAAT+CGG | - | chr7.1:82099311-82099330 | MS.gene021901:intron | 55.0% | |
| GTCTCCGATTGCTTTGGCCA+TGG | + | chr7.1:82099318-82099337 | None:intergenic | 55.0% | |
| TCCCGGACCTCGATTCTCAA+GGG | + | chr7.1:82100047-82100066 | None:intergenic | 55.0% | |
| TTCCCAACCTCATGCCCTTG+AGG | + | chr7.1:82100389-82100408 | None:intergenic | 55.0% | |
| ! | AAAGAGGCCTCAAGGGCATG+AGG | - | chr7.1:82100379-82100398 | MS.gene021901:intron | 55.0% |
| ! | GCATGTGTCGGTGCTTGTGT+CGG | - | chr7.1:82100673-82100692 | MS.gene021901:CDS | 55.0% |
| ! | TGATGCGGGGAGGCATACTT+TGG | + | chr7.1:82099757-82099776 | None:intergenic | 55.0% |
| !! | CCGGGAGTTGTTTTCGCTAC+GGG | - | chr7.1:82100061-82100080 | MS.gene021901:intron | 55.0% |
| AAGAGGACATGCAGGGGGTG+TGG | - | chr7.1:82101640-82101659 | MS.gene021901:CDS | 60.0% | |
| CTCCCGGACCTCGATTCTCA+AGG | + | chr7.1:82100048-82100067 | None:intergenic | 60.0% | |
| GGTCCAAGCCCATACCTGAG+AGG | - | chr7.1:82101728-82101747 | MS.gene021901:CDS | 60.0% | |
| ! | AGGCCTCAAGGGCATGAGGT+TGG | - | chr7.1:82100383-82100402 | MS.gene021901:intron | 60.0% |
| ! | GGCCTCAAGGGCATGAGGTT+GGG | - | chr7.1:82100384-82100403 | MS.gene021901:intron | 60.0% |
| GCTCGAGCGGCACCAAAGCA+TGG | + | chr7.1:82098731-82098750 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 82098372 | 82101961 | 82098372 | ID=MS.gene021901 |
| chr7.1 | mRNA | 82098372 | 82101961 | 82098372 | ID=MS.gene021901.t1;Parent=MS.gene021901 |
| chr7.1 | exon | 82100414 | 82101961 | 82100414 | ID=MS.gene021901.t1.exon1;Parent=MS.gene021901.t1 |
| chr7.1 | CDS | 82100414 | 82101961 | 82100414 | ID=cds.MS.gene021901.t1;Parent=MS.gene021901.t1 |
| chr7.1 | exon | 82098372 | 82098533 | 82098372 | ID=MS.gene021901.t1.exon2;Parent=MS.gene021901.t1 |
| chr7.1 | CDS | 82098372 | 82098533 | 82098372 | ID=cds.MS.gene021901.t1;Parent=MS.gene021901.t1 |
| Gene Sequence |
| Protein sequence |
