Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021927.t1 | XP_013447599.1 | 96.9 | 351 | 11 | 0 | 1 | 351 | 1 | 351 | 3.30E-172 | 614.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021927.t1 | Q9S7W5 | 63.7 | 124 | 42 | 1 | 6 | 129 | 26 | 146 | 7.3e-35 | 149.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021927.t1 | A0A072U750 | 96.9 | 351 | 11 | 0 | 1 | 351 | 1 | 351 | 2.4e-172 | 614.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene021927.t1 | TF | TCP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021927.t1 | MTR_7g015010 | 97.151 | 351 | 10 | 0 | 1 | 351 | 1 | 351 | 0.0 | 697 |
| MS.gene021927.t1 | MTR_6g015350 | 42.973 | 370 | 154 | 16 | 1 | 351 | 2 | 333 | 1.45e-62 | 203 |
| MS.gene021927.t1 | MTR_4g109660 | 62.185 | 119 | 42 | 2 | 1 | 118 | 1 | 117 | 3.71e-45 | 157 |
| MS.gene021927.t1 | MTR_3g026050 | 44.783 | 230 | 101 | 9 | 1 | 209 | 1 | 225 | 1.67e-44 | 157 |
| MS.gene021927.t1 | MTR_8g463380 | 60.526 | 76 | 30 | 0 | 51 | 126 | 48 | 123 | 2.56e-24 | 103 |
| MS.gene021927.t1 | MTR_4g079580 | 58.442 | 77 | 32 | 0 | 51 | 127 | 16 | 92 | 6.87e-24 | 100 |
| MS.gene021927.t1 | MTR_2g078200 | 61.644 | 73 | 28 | 0 | 51 | 123 | 14 | 86 | 9.70e-24 | 99.8 |
| MS.gene021927.t1 | MTR_2g090960 | 60.811 | 74 | 29 | 0 | 51 | 124 | 18 | 91 | 2.92e-23 | 99.0 |
| MS.gene021927.t1 | MTR_4g111935 | 31.330 | 233 | 127 | 9 | 58 | 264 | 133 | 358 | 3.58e-15 | 76.3 |
| MS.gene021927.t1 | MTR_6g017055 | 39.623 | 106 | 58 | 3 | 58 | 158 | 127 | 231 | 9.46e-14 | 72.0 |
| MS.gene021927.t1 | MTR_7g018500 | 50.877 | 57 | 28 | 0 | 59 | 115 | 122 | 178 | 4.65e-13 | 70.1 |
| MS.gene021927.t1 | MTR_1g103380 | 48.333 | 60 | 31 | 0 | 56 | 115 | 200 | 259 | 1.10e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021927.t1 | AT3G02150 | 75.000 | 100 | 25 | 0 | 30 | 129 | 47 | 146 | 1.66e-45 | 157 |
| MS.gene021927.t1 | AT3G02150 | 75.000 | 100 | 25 | 0 | 30 | 129 | 47 | 146 | 4.05e-45 | 158 |
| MS.gene021927.t1 | AT5G08070 | 71.717 | 99 | 24 | 2 | 25 | 123 | 4 | 98 | 5.56e-42 | 147 |
| MS.gene021927.t1 | AT5G08070 | 71.717 | 99 | 24 | 2 | 25 | 123 | 4 | 98 | 5.56e-42 | 147 |
| MS.gene021927.t1 | AT5G60970 | 83.750 | 80 | 12 | 1 | 43 | 122 | 49 | 127 | 6.14e-42 | 150 |
| MS.gene021927.t1 | AT1G30210 | 75.000 | 72 | 18 | 0 | 47 | 118 | 40 | 111 | 9.20e-30 | 116 |
| MS.gene021927.t1 | AT1G30210 | 75.000 | 72 | 18 | 0 | 47 | 118 | 40 | 111 | 9.20e-30 | 116 |
| MS.gene021927.t1 | AT4G18390 | 35.000 | 260 | 112 | 8 | 47 | 298 | 32 | 242 | 3.00e-27 | 110 |
| MS.gene021927.t1 | AT4G18390 | 35.000 | 260 | 112 | 8 | 47 | 298 | 32 | 242 | 3.00e-27 | 110 |
| MS.gene021927.t1 | AT1G53230 | 61.842 | 76 | 29 | 0 | 51 | 126 | 43 | 118 | 2.06e-25 | 105 |
| MS.gene021927.t1 | AT1G53230 | 61.842 | 76 | 29 | 0 | 51 | 126 | 43 | 118 | 2.06e-25 | 105 |
| MS.gene021927.t1 | AT3G15030 | 60.811 | 74 | 29 | 0 | 51 | 124 | 39 | 112 | 9.62e-24 | 101 |
| MS.gene021927.t1 | AT3G15030 | 60.811 | 74 | 29 | 0 | 51 | 124 | 39 | 112 | 9.62e-24 | 101 |
| MS.gene021927.t1 | AT3G15030 | 60.811 | 74 | 29 | 0 | 51 | 124 | 39 | 112 | 9.62e-24 | 101 |
| MS.gene021927.t1 | AT3G15030 | 60.811 | 74 | 29 | 0 | 51 | 124 | 39 | 112 | 9.62e-24 | 101 |
| MS.gene021927.t1 | AT2G31070 | 64.615 | 65 | 23 | 0 | 51 | 115 | 23 | 87 | 5.33e-21 | 93.2 |
| MS.gene021927.t1 | AT1G68800 | 47.761 | 67 | 35 | 0 | 49 | 115 | 104 | 170 | 5.49e-15 | 75.5 |
| MS.gene021927.t1 | AT1G68800 | 47.761 | 67 | 35 | 0 | 49 | 115 | 104 | 170 | 5.92e-15 | 75.5 |
| MS.gene021927.t1 | AT1G67260 | 42.105 | 76 | 44 | 0 | 46 | 121 | 76 | 151 | 6.28e-15 | 75.5 |
| MS.gene021927.t1 | AT1G67260 | 42.105 | 76 | 44 | 0 | 46 | 121 | 76 | 151 | 6.28e-15 | 75.5 |
| MS.gene021927.t1 | AT1G67260 | 42.105 | 76 | 44 | 0 | 46 | 121 | 76 | 151 | 7.01e-15 | 75.5 |
| MS.gene021927.t1 | AT3G18550 | 44.048 | 84 | 41 | 2 | 32 | 115 | 129 | 206 | 1.25e-13 | 72.0 |
| MS.gene021927.t1 | AT3G18550 | 44.048 | 84 | 41 | 2 | 32 | 115 | 129 | 206 | 1.39e-13 | 72.0 |
| MS.gene021927.t1 | AT3G18550 | 44.048 | 84 | 41 | 2 | 32 | 115 | 129 | 206 | 1.39e-13 | 72.0 |
| MS.gene021927.t1 | AT3G18550 | 44.048 | 84 | 41 | 2 | 32 | 115 | 129 | 206 | 1.71e-13 | 71.6 |
Find 61 sgRNAs with CRISPR-Local
Find 68 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAAATCACCCTTCATTTAT+TGG | 0.099357 | 7.1:-81421222 | MS.gene021927:CDS |
| TGTAACATATTGTTATTATT+TGG | 0.154767 | 7.1:+81421249 | None:intergenic |
| CTTCAAGTCAAAATTCTTCT+TGG | 0.156785 | 7.1:-81421404 | MS.gene021927:CDS |
| AGTGAACTCTTGTTCTTTAT+TGG | 0.160335 | 7.1:+81420849 | None:intergenic |
| AATTCTCTTGAAACTTCTTT+AGG | 0.204373 | 7.1:+81421372 | None:intergenic |
| GTTCCTACAGGTGGAAAATT+AGG | 0.209351 | 7.1:+81421519 | None:intergenic |
| CTTGATACTCTGACAATTCT+TGG | 0.239929 | 7.1:+81421738 | None:intergenic |
| GTACTATTCATCAAGTAATT+TGG | 0.245121 | 7.1:+81421336 | None:intergenic |
| TGCTGAAAATTCTTCTCAAT+TGG | 0.271973 | 7.1:-81421142 | MS.gene021927:CDS |
| ATTCTCTTGAAACTTCTTTA+GGG | 0.288069 | 7.1:+81421373 | None:intergenic |
| CCAATAAATGAAGGGTGATT+TGG | 0.289695 | 7.1:+81421222 | None:intergenic |
| ATTCTTGGATCTTTCAATCT+TGG | 0.296306 | 7.1:+81421753 | None:intergenic |
| GTCAGAGTATCAAGAGCTTT+TGG | 0.318336 | 7.1:-81421729 | MS.gene021927:CDS |
| TAAAGAAGTTTCAAGAGAAT+TGG | 0.320601 | 7.1:-81421370 | MS.gene021927:CDS |
| AATTCTTCTCAAATGATGTT+AGG | 0.334825 | 7.1:-81421066 | MS.gene021927:CDS |
| TCAATAGGAACAATATTCAT+TGG | 0.339202 | 7.1:-81421437 | MS.gene021927:CDS |
| TATGATCTTCAAGATAGGTT+AGG | 0.344793 | 7.1:-81421618 | MS.gene021927:CDS |
| GATTGAGAGATAGAAGAATA+AGG | 0.365377 | 7.1:-81421668 | MS.gene021927:CDS |
| CCAATGTTGTCTTTATCAAC+TGG | 0.374206 | 7.1:-81421090 | MS.gene021927:CDS |
| TGATGAACCTCTTGTTTCAA+TGG | 0.375029 | 7.1:+81421846 | None:intergenic |
| AACAATTGTTCAATTTCAAT+AGG | 0.377158 | 7.1:-81421452 | MS.gene021927:CDS |
| AACCTAGCAAAGTTGTTGAT+TGG | 0.387978 | 7.1:-81421587 | MS.gene021927:CDS |
| GCTGAAAATTCTTCTCAATT+GGG | 0.390841 | 7.1:-81421141 | MS.gene021927:CDS |
| CAACAATCCATCCTTCAGTT+TGG | 0.407175 | 7.1:-81420905 | MS.gene021927:CDS |
| GTAGGAACAAATTTCAACTT+TGG | 0.419771 | 7.1:-81421504 | MS.gene021927:CDS |
| AACTTTATGATCTTCAAGAT+AGG | 0.421843 | 7.1:-81421623 | MS.gene021927:CDS |
| ATGATCTTCAAGATAGGTTA+GGG | 0.433727 | 7.1:-81421617 | MS.gene021927:CDS |
| AGCAAAGTATGCACAATAAG+AGG | 0.437085 | 7.1:-81421690 | MS.gene021927:CDS |
| TTTAATAAACCAATAAATGA+AGG | 0.455410 | 7.1:+81421213 | None:intergenic |
| CAATAGGAACAATATTCATT+GGG | 0.458388 | 7.1:-81421436 | MS.gene021927:CDS |
| TTGAAATTTGTTCCTACAGG+TGG | 0.465228 | 7.1:+81421510 | None:intergenic |
| TTGTTGAGAGAATTAGTCAT+TGG | 0.470696 | 7.1:+81420922 | None:intergenic |
| AAGTTGAAATTTGTTCCTAC+AGG | 0.474911 | 7.1:+81421507 | None:intergenic |
| TTTGATGATAATGATGGTTG+TGG | 0.483862 | 7.1:+81420974 | None:intergenic |
| ACTTGGTACTAATTACCAAT+GGG | 0.492610 | 7.1:-81421181 | MS.gene021927:CDS |
| TTCTTCAAATGTTAATGCAA+TGG | 0.492790 | 7.1:-81421025 | MS.gene021927:CDS |
| TAGAAATTTGGCCAAACTGA+AGG | 0.496121 | 7.1:+81420894 | None:intergenic |
| TTGTTGAGTTCATTAGAAGA+TGG | 0.499012 | 7.1:+81421477 | None:intergenic |
| TCTTCTCAATTGGGAAACAA+TGG | 0.501500 | 7.1:-81421132 | MS.gene021927:CDS |
| TTATTAAATCCTATGCCACT+TGG | 0.521662 | 7.1:-81421198 | MS.gene021927:CDS |
| AAATGTTAATGCAATGGAGA+TGG | 0.523566 | 7.1:-81421019 | MS.gene021927:CDS |
| ACAGGTGGAAAATTAGGTAA+TGG | 0.536982 | 7.1:+81421525 | None:intergenic |
| CCAGTTGATAAAGACAACAT+TGG | 0.545201 | 7.1:+81421090 | None:intergenic |
| TCAACATTTGATGATAATGA+TGG | 0.545561 | 7.1:+81420968 | None:intergenic |
| AACCAATCAACAACTTTGCT+AGG | 0.547433 | 7.1:+81421585 | None:intergenic |
| TAATTAGTACCAAGTGGCAT+AGG | 0.547722 | 7.1:+81421189 | None:intergenic |
| GATGAAAATATTAACAAGCA+AGG | 0.549563 | 7.1:-81421306 | MS.gene021927:CDS |
| CACTTGGTACTAATTACCAA+TGG | 0.556420 | 7.1:-81421182 | MS.gene021927:CDS |
| CATTGGAAGTACCTCCCCAT+TGG | 0.558728 | 7.1:+81421166 | None:intergenic |
| AATTTGGCCAAACTGAAGGA+TGG | 0.562622 | 7.1:+81420898 | None:intergenic |
| TGGCCATTGTGATGAAGCTA+AGG | 0.563573 | 7.1:+81421773 | None:intergenic |
| AGGAACAATATTCATTGGGA+AGG | 0.563907 | 7.1:-81421432 | MS.gene021927:CDS |
| GGTGGAAAATTAGGTAATGG+TGG | 0.564196 | 7.1:+81421528 | None:intergenic |
| GTTGATAAAGACAACATTGG+TGG | 0.570845 | 7.1:+81421093 | None:intergenic |
| TCATAAAGTTGAATAGCTGT+TGG | 0.592296 | 7.1:+81421636 | None:intergenic |
| TTAATAAACCAATAAATGAA+GGG | 0.612685 | 7.1:+81421214 | None:intergenic |
| GAAGCTAAGGAGCTTGATGA+TGG | 0.616225 | 7.1:+81421786 | None:intergenic |
| GCTCCTTAGCTTCATCACAA+TGG | 0.647279 | 7.1:-81421776 | MS.gene021927:CDS |
| GGTACTAATTACCAATGGGG+AGG | 0.679474 | 7.1:-81421177 | MS.gene021927:CDS |
| CATTGGTAATTAGTACCAAG+TGG | 0.701178 | 7.1:+81421183 | None:intergenic |
| CTTGGTACTAATTACCAATG+GGG | 0.737610 | 7.1:-81421180 | MS.gene021927:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATAAACCAATAAATGAA+GGG | + | chr7.1:81421502-81421521 | None:intergenic | 15.0% |
| !! | TTTAATAAACCAATAAATGA+AGG | + | chr7.1:81421503-81421522 | None:intergenic | 15.0% |
| !!! | TGTAACATATTGTTATTATT+TGG | + | chr7.1:81421467-81421486 | None:intergenic | 15.0% |
| !! | AACAATTGTTCAATTTCAAT+AGG | - | chr7.1:81421261-81421280 | MS.gene021927:CDS | 20.0% |
| ! | AAACGATCATGAAAAAGAAA+AGG | - | chr7.1:81420896-81420915 | MS.gene021927:CDS | 25.0% |
| ! | AACTTTATGATCTTCAAGAT+AGG | - | chr7.1:81421090-81421109 | MS.gene021927:CDS | 25.0% |
| ! | AATTCTCTTGAAACTTCTTT+AGG | + | chr7.1:81421344-81421363 | None:intergenic | 25.0% |
| ! | AATTCTTCTCAAATGATGTT+AGG | - | chr7.1:81421647-81421666 | MS.gene021927:CDS | 25.0% |
| ! | ATTCTCTTGAAACTTCTTTA+GGG | + | chr7.1:81421343-81421362 | None:intergenic | 25.0% |
| ! | CAATAGGAACAATATTCATT+GGG | - | chr7.1:81421277-81421296 | MS.gene021927:CDS | 25.0% |
| ! | GATGAAAATATTAACAAGCA+AGG | - | chr7.1:81421407-81421426 | MS.gene021927:CDS | 25.0% |
| ! | GTACTATTCATCAAGTAATT+TGG | + | chr7.1:81421380-81421399 | None:intergenic | 25.0% |
| ! | TAAAGAAGTTTCAAGAGAAT+TGG | - | chr7.1:81421343-81421362 | MS.gene021927:CDS | 25.0% |
| ! | TCAATAGGAACAATATTCAT+TGG | - | chr7.1:81421276-81421295 | MS.gene021927:CDS | 25.0% |
| ! | TTCTTCAAATGTTAATGCAA+TGG | - | chr7.1:81421688-81421707 | MS.gene021927:CDS | 25.0% |
| !! | TCAACATTTGATGATAATGA+TGG | + | chr7.1:81421748-81421767 | None:intergenic | 25.0% |
| AAATGTTAATGCAATGGAGA+TGG | - | chr7.1:81421694-81421713 | MS.gene021927:CDS | 30.0% | |
| ACTTGGTACTAATTACCAAT+GGG | - | chr7.1:81421532-81421551 | MS.gene021927:CDS | 30.0% | |
| AGTGAACTCTTGTTCTTTAT+TGG | + | chr7.1:81421867-81421886 | None:intergenic | 30.0% | |
| ATGATCTTCAAGATAGGTTA+GGG | - | chr7.1:81421096-81421115 | MS.gene021927:CDS | 30.0% | |
| ATTCTTGGATCTTTCAATCT+TGG | + | chr7.1:81420963-81420982 | None:intergenic | 30.0% | |
| CTTCAAGTCAAAATTCTTCT+TGG | - | chr7.1:81421309-81421328 | MS.gene021927:CDS | 30.0% | |
| GATTGAGAGATAGAAGAATA+AGG | - | chr7.1:81421045-81421064 | MS.gene021927:CDS | 30.0% | |
| GCTGAAAATTCTTCTCAATT+GGG | - | chr7.1:81421572-81421591 | MS.gene021927:CDS | 30.0% | |
| GTAGGAACAAATTTCAACTT+TGG | - | chr7.1:81421209-81421228 | MS.gene021927:CDS | 30.0% | |
| TATGATCTTCAAGATAGGTT+AGG | - | chr7.1:81421095-81421114 | MS.gene021927:CDS | 30.0% | |
| TCATAAAGTTGAATAGCTGT+TGG | + | chr7.1:81421080-81421099 | None:intergenic | 30.0% | |
| TGCTGAAAATTCTTCTCAAT+TGG | - | chr7.1:81421571-81421590 | MS.gene021927:CDS | 30.0% | |
| TTATTAAATCCTATGCCACT+TGG | - | chr7.1:81421515-81421534 | MS.gene021927:CDS | 30.0% | |
| TTGTTGAGAGAATTAGTCAT+TGG | + | chr7.1:81421794-81421813 | None:intergenic | 30.0% | |
| TTGTTGAGTTCATTAGAAGA+TGG | + | chr7.1:81421239-81421258 | None:intergenic | 30.0% | |
| TTTGGAAAAACATTTGCAGT+AGG | + | chr7.1:81421449-81421468 | None:intergenic | 30.0% | |
| ! | AAGTTGAAATTTGTTCCTAC+AGG | + | chr7.1:81421209-81421228 | None:intergenic | 30.0% |
| ! | AGAAGAATTTTCAGCATCAT+TGG | + | chr7.1:81421567-81421586 | None:intergenic | 30.0% |
| ! | AGATTTTCCATTGAAACAAG+AGG | - | chr7.1:81420860-81420879 | MS.gene021927:CDS | 30.0% |
| ! | TTTGATGATAATGATGGTTG+TGG | + | chr7.1:81421742-81421761 | None:intergenic | 30.0% |
| !!! | TCTGCTGTTTTGTAGAAATT+TGG | + | chr7.1:81421834-81421853 | None:intergenic | 30.0% |
| AACCAATCAACAACTTTGCT+AGG | + | chr7.1:81421131-81421150 | None:intergenic | 35.0% | |
| AACCTAGCAAAGTTGTTGAT+TGG | - | chr7.1:81421126-81421145 | MS.gene021927:CDS | 35.0% | |
| ACAGGTGGAAAATTAGGTAA+TGG | + | chr7.1:81421191-81421210 | None:intergenic | 35.0% | |
| AGCAAAGTATGCACAATAAG+AGG | - | chr7.1:81421023-81421042 | MS.gene021927:CDS | 35.0% | |
| AGGAACAATATTCATTGGGA+AGG | - | chr7.1:81421281-81421300 | MS.gene021927:CDS | 35.0% | |
| CACTTGGTACTAATTACCAA+TGG | - | chr7.1:81421531-81421550 | MS.gene021927:CDS | 35.0% | |
| CCAAATCACCCTTCATTTAT+TGG | - | chr7.1:81421491-81421510 | MS.gene021927:CDS | 35.0% | |
| CCAATAAATGAAGGGTGATT+TGG | + | chr7.1:81421494-81421513 | None:intergenic | 35.0% | |
| CCAATGTTGTCTTTATCAAC+TGG | - | chr7.1:81421623-81421642 | MS.gene021927:CDS | 35.0% | |
| CTTGATACTCTGACAATTCT+TGG | + | chr7.1:81420978-81420997 | None:intergenic | 35.0% | |
| CTTGGTACTAATTACCAATG+GGG | - | chr7.1:81421533-81421552 | MS.gene021927:CDS | 35.0% | |
| TAATTAGTACCAAGTGGCAT+AGG | + | chr7.1:81421527-81421546 | None:intergenic | 35.0% | |
| TAGAAATTTGGCCAAACTGA+AGG | + | chr7.1:81421822-81421841 | None:intergenic | 35.0% | |
| TCTTCTCAATTGGGAAACAA+TGG | - | chr7.1:81421581-81421600 | MS.gene021927:CDS | 35.0% | |
| ! | CATTGGTAATTAGTACCAAG+TGG | + | chr7.1:81421533-81421552 | None:intergenic | 35.0% |
| ! | GTTGATAAAGACAACATTGG+TGG | + | chr7.1:81421623-81421642 | None:intergenic | 35.0% |
| ! | TGATGAACCTCTTGTTTCAA+TGG | + | chr7.1:81420870-81420889 | None:intergenic | 35.0% |
| ! | TTACCTAATTTTCCACCTGT+AGG | - | chr7.1:81421191-81421210 | MS.gene021927:CDS | 35.0% |
| ! | TTGAAATTTGTTCCTACAGG+TGG | + | chr7.1:81421206-81421225 | None:intergenic | 35.0% |
| !! | CCAGTTGATAAAGACAACAT+TGG | + | chr7.1:81421626-81421645 | None:intergenic | 35.0% |
| AATTTGGCCAAACTGAAGGA+TGG | + | chr7.1:81421818-81421837 | None:intergenic | 40.0% | |
| CAACAATCCATCCTTCAGTT+TGG | - | chr7.1:81421808-81421827 | MS.gene021927:CDS | 40.0% | |
| GTTCCTACAGGTGGAAAATT+AGG | + | chr7.1:81421197-81421216 | None:intergenic | 40.0% | |
| ! | GGTGGAAAATTAGGTAATGG+TGG | + | chr7.1:81421188-81421207 | None:intergenic | 40.0% |
| !! | AGAGTATCAAGAGCTTTTGG+TGG | - | chr7.1:81420987-81421006 | MS.gene021927:CDS | 40.0% |
| !! | GTCAGAGTATCAAGAGCTTT+TGG | - | chr7.1:81420984-81421003 | MS.gene021927:CDS | 40.0% |
| GAAGCTAAGGAGCTTGATGA+TGG | + | chr7.1:81420930-81420949 | None:intergenic | 45.0% | |
| GCTCCTTAGCTTCATCACAA+TGG | - | chr7.1:81420937-81420956 | MS.gene021927:CDS | 45.0% | |
| GGTACTAATTACCAATGGGG+AGG | - | chr7.1:81421536-81421555 | MS.gene021927:CDS | 45.0% | |
| TGGCCATTGTGATGAAGCTA+AGG | + | chr7.1:81420943-81420962 | None:intergenic | 45.0% | |
| !! | CATTGGAAGTACCTCCCCAT+TGG | + | chr7.1:81421550-81421569 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 81420840 | 81421895 | 81420840 | ID=MS.gene021927 |
| chr7.1 | mRNA | 81420840 | 81421895 | 81420840 | ID=MS.gene021927.t1;Parent=MS.gene021927 |
| chr7.1 | exon | 81420840 | 81421895 | 81420840 | ID=MS.gene021927.t1.exon1;Parent=MS.gene021927.t1 |
| chr7.1 | CDS | 81420840 | 81421895 | 81420840 | ID=cds.MS.gene021927.t1;Parent=MS.gene021927.t1 |
| Gene Sequence |
| Protein sequence |
