AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene021989

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene021989.t1 MTR_7g016600 97.600 250 5 1 1 250 1 249 0.0 498
MS.gene021989.t1 MTR_6g015975 88.142 253 24 5 1 250 1 250 4.12e-161 446
MS.gene021989.t1 MTR_3g084980 65.079 252 76 4 1 249 1 243 8.52e-107 308
MS.gene021989.t1 MTR_8g097090 64.542 251 77 4 1 249 1 241 2.24e-103 300
MS.gene021989.t1 MTR_4g109810 54.545 253 101 6 1 250 1 242 5.61e-83 248
MS.gene021989.t1 MTR_8g033270 49.219 256 119 6 1 250 1 251 2.35e-70 216
MS.gene021989.t1 MTR_7g075850 50.196 255 117 6 1 250 1 250 2.48e-70 216
MS.gene021989.t1 MTR_4g109830 57.988 169 71 0 1 169 1 169 6.38e-60 189
MS.gene021989.t1 MTR_8g066260 47.534 223 107 4 1 222 1 214 4.31e-56 179
MS.gene021989.t1 MTR_6g464720 52.023 173 82 1 1 172 1 173 1.07e-53 174
MS.gene021989.t1 MTR_1g101970 49.419 172 85 2 1 171 1 171 1.09e-49 161
MS.gene021989.t1 MTR_7g016630 38.372 258 144 4 1 250 1 251 2.45e-49 163
MS.gene021989.t1 MTR_5g046790 48.851 174 89 0 1 174 1 174 2.84e-49 161
MS.gene021989.t1 MTR_4g102530 50.000 168 83 1 1 168 1 167 3.45e-47 155
MS.gene021989.t1 MTR_8g087860 42.081 221 118 4 1 216 17 232 4.14e-47 157
MS.gene021989.t1 MTR_3g452380 42.793 222 117 4 1 220 16 229 1.87e-46 155
MS.gene021989.t1 MTR_3g005530 46.857 175 92 1 1 175 1 174 4.24e-46 153
MS.gene021989.t1 MTR_5g046870 83.750 80 13 0 1 80 1 80 8.05e-46 149
MS.gene021989.t1 MTR_7g075870 49.112 169 86 0 1 169 1 169 1.15e-45 152
MS.gene021989.t1 MTR_2g017865 44.565 184 100 2 1 184 16 197 1.61e-45 153
MS.gene021989.t1 MTR_8g033220 42.365 203 115 2 1 202 1 202 9.44e-45 150
MS.gene021989.t1 MTR_8g033220 42.365 203 115 2 1 202 1 202 1.23e-44 150
MS.gene021989.t1 MTR_7g075870 49.704 169 84 1 1 169 1 168 3.76e-44 148
MS.gene021989.t1 MTR_2g009890 43.094 181 97 3 1 179 1 177 1.96e-39 138
MS.gene021989.t1 MTR_5g046830 47.468 158 77 3 92 249 20 171 3.34e-39 134
MS.gene021989.t1 MTR_4g036050 43.787 169 94 1 1 168 1 169 1.84e-38 133
MS.gene021989.t1 MTR_5g031000 38.889 216 123 5 1 213 1 210 3.56e-37 130
MS.gene021989.t1 MTR_5g031000 41.899 179 101 3 1 179 1 176 4.81e-37 130
MS.gene021989.t1 MTR_4g036050 43.671 158 88 1 1 157 1 158 3.65e-36 127
MS.gene021989.t1 MTR_1g038300 39.884 173 100 2 1 169 1 173 1.94e-35 126
MS.gene021989.t1 MTR_4g036050 45.517 145 78 1 1 144 1 145 1.00e-34 122
MS.gene021989.t1 MTR_5g066180 38.914 221 118 7 1 216 1 209 1.23e-34 124
MS.gene021989.t1 MTR_4g036050 45.833 144 77 1 1 143 1 144 1.46e-34 122
MS.gene021989.t1 MTR_1g053070 37.945 253 132 8 1 233 1 248 3.26e-34 124
MS.gene021989.t1 MTR_0003s0590 44.633 177 95 2 1 175 1 176 4.12e-34 123
MS.gene021989.t1 MTR_3g088615 43.537 147 77 2 1 146 1 142 3.68e-33 119
MS.gene021989.t1 MTR_5g032520 41.667 168 97 1 1 168 1 167 1.17e-32 119
MS.gene021989.t1 MTR_5g032150 41.667 168 97 1 1 168 1 167 1.75e-32 118
MS.gene021989.t1 MTR_2g461710 81.356 59 11 0 1 59 1 59 3.88e-29 105
MS.gene021989.t1 MTR_3g113030 42.138 159 85 4 1 158 1 153 5.76e-29 109
MS.gene021989.t1 MTR_1g029670 38.286 175 98 3 1 174 1 166 9.81e-29 107
MS.gene021989.t1 MTR_5g021270 39.011 182 95 5 1 174 1 174 1.79e-28 108
MS.gene021989.t1 MTR_5g021270 39.011 182 95 5 1 174 1 174 2.10e-28 108
MS.gene021989.t1 MTR_4g093970 38.021 192 109 5 1 187 27 213 9.31e-28 106
MS.gene021989.t1 MTR_5g066960 65.000 60 21 0 1 60 1 60 5.37e-24 91.7
MS.gene021989.t1 MTR_4g084740 57.143 70 30 0 1 70 1 70 1.18e-21 92.4
MS.gene021989.t1 MTR_2g461760 34.555 191 104 5 63 250 1 173 1.41e-20 85.9
MS.gene021989.t1 MTR_3g102570 57.143 70 30 0 1 70 1 70 1.42e-20 89.0
MS.gene021989.t1 MTR_4g093030 61.667 60 23 0 1 60 1 60 2.65e-20 85.1
MS.gene021989.t1 MTR_2g461760 31.282 195 104 5 63 250 1 172 4.05e-20 84.7
MS.gene021989.t1 MTR_1g041615 80.000 45 9 0 16 60 20 64 1.03e-18 80.1
MS.gene021989.t1 MTR_2g030740 52.174 69 32 1 2 70 9 76 2.94e-17 78.6
MS.gene021989.t1 MTR_2g093190 50.704 71 32 2 2 70 7 76 9.30e-17 77.0
MS.gene021989.t1 MTR_1g108510 50.704 71 32 2 2 70 7 76 1.11e-16 77.0
MS.gene021989.t1 MTR_3g030770 50.704 71 32 2 2 70 7 76 1.20e-16 76.6
MS.gene021989.t1 MTR_1g108580 50.704 71 32 2 2 70 7 76 1.45e-16 76.6
MS.gene021989.t1 MTR_8g086290 41.667 96 52 2 2 97 12 103 1.74e-16 75.1
MS.gene021989.t1 MTR_3g052920 52.174 69 32 1 2 70 9 76 1.96e-16 76.3
MS.gene021989.t1 MTR_3g052870 49.275 69 34 1 2 70 9 76 9.47e-16 74.3
MS.gene021989.t1 MTR_5g045560 51.429 70 33 1 1 70 8 76 1.27e-15 74.3
MS.gene021989.t1 MTR_8g043650 49.275 69 34 1 2 70 9 76 1.28e-15 74.3
MS.gene021989.t1 MTR_1g105910 49.275 69 34 1 2 70 9 76 1.48e-15 73.9
MS.gene021989.t1 MTR_1g105920 49.275 69 34 1 2 70 9 76 1.52e-15 73.9
MS.gene021989.t1 MTR_8g051580 49.180 61 31 0 1 61 1 61 3.31e-15 72.0
MS.gene021989.t1 MTR_1g012570 50.725 69 33 1 2 70 9 76 3.87e-15 72.8
MS.gene021989.t1 MTR_2g085280 50.725 69 33 1 2 70 9 76 3.99e-15 72.8
MS.gene021989.t1 MTR_2g085250 50.725 69 33 1 2 70 9 76 4.03e-15 72.8
MS.gene021989.t1 MTR_1g075600 47.826 69 35 1 2 70 9 76 5.34e-15 72.4
MS.gene021989.t1 MTR_5g041650 32.787 183 92 7 1 155 38 217 5.51e-15 73.9
MS.gene021989.t1 MTR_8g079502 52.632 57 27 0 1 57 1 57 7.26e-15 70.9
MS.gene021989.t1 MTR_2g105290 54.386 57 26 0 1 57 11 67 7.67e-15 70.9
MS.gene021989.t1 MTR_1g077360 47.826 69 35 1 2 70 9 76 1.29e-14 71.2
MS.gene021989.t1 MTR_1g047550 52.632 57 27 0 1 57 1 57 2.30e-14 69.7
MS.gene021989.t1 MTR_4g094632 47.541 61 32 0 1 61 1 61 3.08e-14 68.6
MS.gene021989.t1 MTR_1g106070 46.377 69 36 1 2 70 9 76 3.20e-14 69.3
MS.gene021989.t1 MTR_5g055100 49.275 69 34 1 2 70 9 76 3.55e-14 70.1
MS.gene021989.t1 MTR_1g054265 50.877 57 28 0 1 57 1 57 5.35e-14 68.2
MS.gene021989.t1 MTR_5g053390 49.275 69 34 1 2 70 9 76 6.32e-14 69.3
MS.gene021989.t1 MTR_1g063160 49.123 57 29 0 1 57 1 57 8.99e-14 67.8
MS.gene021989.t1 MTR_0121s0100 51.724 58 26 1 2 57 7 64 1.08e-13 66.6
MS.gene021989.t1 MTR_4g131030 49.123 57 29 0 1 57 1 57 1.29e-13 68.2
MS.gene021989.t1 MTR_0121s0080 46.479 71 35 2 2 70 7 76 4.17e-13 67.0
MS.gene021989.t1 MTR_4g108720 50.943 53 26 0 1 53 1 53 7.42e-13 67.8
MS.gene021989.t1 MTR_7g028448 34.307 137 82 4 16 148 26 158 8.38e-13 65.1
MS.gene021989.t1 MTR_4g036915 34.307 137 82 4 16 148 26 158 8.38e-13 65.1
MS.gene021989.t1 MTR_3g030780 43.478 69 38 1 2 70 9 76 1.17e-12 63.9
MS.gene021989.t1 MTR_4g094638 32.237 152 78 7 1 139 1 140 1.31e-12 64.7
MS.gene021989.t1 MTR_3g080940 41.429 70 40 1 1 70 8 76 2.09e-12 64.7
MS.gene021989.t1 MTR_8g046350 44.262 61 34 0 1 61 1 61 3.84e-12 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene021989.t1 AT3G02310 73.725 255 57 8 1 250 1 250 8.08e-129 365
MS.gene021989.t1 AT5G15800 73.828 256 56 7 1 250 1 251 5.16e-121 345
MS.gene021989.t1 AT5G15800 71.970 264 58 8 1 250 1 262 1.18e-119 342
MS.gene021989.t1 AT3G02310 84.884 172 24 2 1 171 1 171 4.69e-101 293
MS.gene021989.t1 AT1G24260 62.055 253 83 3 1 249 1 244 5.81e-100 291
MS.gene021989.t1 AT1G24260 62.302 252 83 3 1 249 1 243 1.12e-99 291
MS.gene021989.t1 AT1G24260 60.317 252 75 4 1 249 1 230 6.53e-94 276
MS.gene021989.t1 AT2G03710 53.030 264 104 5 1 250 1 258 8.92e-86 256
MS.gene021989.t1 AT2G03710 53.030 264 103 6 1 250 1 257 5.22e-84 251
MS.gene021989.t1 AT2G03710 65.896 173 57 2 1 172 1 172 7.00e-75 226
MS.gene021989.t1 AT2G45650 50.391 256 117 7 1 250 1 252 6.88e-71 218
MS.gene021989.t1 AT1G69120 52.874 174 82 0 1 174 1 174 9.78e-58 184
MS.gene021989.t1 AT1G69120 52.874 174 82 0 1 174 1 174 6.77e-57 182
MS.gene021989.t1 AT1G26310 54.545 176 78 2 1 174 1 176 9.52e-56 179
MS.gene021989.t1 AT5G60910 42.857 252 125 6 1 250 1 235 9.97e-54 174
MS.gene021989.t1 AT3G61120 53.448 174 78 2 1 174 1 171 1.60e-52 171
MS.gene021989.t1 AT4G09960 44.503 191 103 3 1 190 1 189 2.12e-49 162
MS.gene021989.t1 AT4G09960 44.503 191 103 3 1 190 2 190 2.28e-49 162
MS.gene021989.t1 AT4G09960 44.503 191 103 3 1 190 11 199 3.40e-49 162
MS.gene021989.t1 AT4G09960 44.503 191 103 3 1 190 27 215 1.20e-48 161
MS.gene021989.t1 AT3G30260 51.316 152 74 0 1 152 1 152 8.61e-48 159
MS.gene021989.t1 AT2G45660 49.708 171 85 1 1 171 1 170 3.71e-47 156
MS.gene021989.t1 AT4G09960 44.103 195 94 6 1 184 1 191 1.42e-46 154
MS.gene021989.t1 AT3G58780 42.647 204 116 1 1 204 16 218 2.52e-46 155
MS.gene021989.t1 AT3G58780 42.647 204 116 1 1 204 22 224 3.24e-46 155
MS.gene021989.t1 AT4G09960 49.367 158 77 3 1 157 96 251 6.31e-46 156
MS.gene021989.t1 AT2G42830 47.126 174 91 1 1 174 16 188 1.78e-45 152
MS.gene021989.t1 AT4G18960 45.455 187 100 2 2 188 18 202 3.41e-45 152
MS.gene021989.t1 AT2G45660 50.318 157 77 1 1 157 1 156 5.50e-45 149
MS.gene021989.t1 AT2G42830 48.408 157 80 1 1 157 16 171 3.87e-44 149
MS.gene021989.t1 AT3G58780 41.667 204 111 1 1 204 16 211 5.60e-44 149
MS.gene021989.t1 AT4G11880 51.592 157 75 1 1 157 1 156 1.96e-43 145
MS.gene021989.t1 AT4G11880 51.592 157 75 1 1 157 1 156 1.96e-43 145
MS.gene021989.t1 AT4G22950 46.821 173 90 2 1 173 1 171 5.64e-43 144
MS.gene021989.t1 AT3G58780 50.000 152 75 1 1 152 16 166 1.33e-42 146
MS.gene021989.t1 AT3G58780 38.158 228 117 1 1 204 16 243 3.42e-42 145
MS.gene021989.t1 AT4G22950 47.619 168 86 2 1 168 1 166 4.48e-42 143
MS.gene021989.t1 AT4G22950 47.619 168 86 2 1 168 1 166 4.48e-42 143
MS.gene021989.t1 AT4G11880 50.289 173 85 1 1 173 1 172 4.79e-42 143
MS.gene021989.t1 AT4G11880 50.289 173 85 1 1 173 1 172 4.79e-42 143
MS.gene021989.t1 AT5G62165 45.109 184 96 2 1 184 1 179 9.08e-41 139
MS.gene021989.t1 AT5G62165 45.109 184 96 2 1 184 1 179 9.08e-41 139
MS.gene021989.t1 AT5G62165 45.109 184 96 2 1 184 1 179 9.08e-41 139
MS.gene021989.t1 AT4G37940 38.756 209 124 3 1 207 1 207 1.28e-40 139
MS.gene021989.t1 AT3G57230 42.458 179 101 2 1 179 1 177 5.24e-40 138
MS.gene021989.t1 AT3G57230 42.458 179 101 2 1 179 1 177 5.24e-40 138
MS.gene021989.t1 AT5G51870 40.816 196 103 4 1 191 1 188 6.07e-38 132
MS.gene021989.t1 AT3G57230 47.619 147 75 2 1 147 1 145 6.38e-38 130
MS.gene021989.t1 AT5G62165 45.509 167 70 3 1 157 1 156 7.02e-38 130
MS.gene021989.t1 AT5G62165 45.509 167 70 3 1 157 1 156 7.02e-38 130
MS.gene021989.t1 AT5G62165 45.509 167 70 3 1 157 1 156 7.02e-38 130
MS.gene021989.t1 AT5G51870 40.291 206 110 4 1 201 1 198 7.57e-37 129
MS.gene021989.t1 AT2G22630 40.223 179 105 2 1 179 1 177 8.77e-37 130
MS.gene021989.t1 AT2G22630 40.223 179 105 2 1 179 1 177 8.77e-37 130
MS.gene021989.t1 AT5G23260 39.623 212 115 5 1 211 1 200 8.86e-37 130
MS.gene021989.t1 AT5G13790 41.441 222 118 4 1 218 1 214 1.01e-36 130
MS.gene021989.t1 AT5G51870 40.291 206 110 4 1 201 11 208 1.04e-36 129
MS.gene021989.t1 AT5G23260 39.623 212 115 5 1 211 17 216 1.33e-36 130
MS.gene021989.t1 AT5G13790 41.704 223 119 4 1 218 1 217 2.76e-36 129
MS.gene021989.t1 AT4G37940 40.625 192 111 3 1 191 1 190 3.60e-36 127
MS.gene021989.t1 AT2G14210 44.048 168 93 1 1 168 1 167 4.55e-36 128
MS.gene021989.t1 AT5G62165 45.223 157 65 3 1 147 1 146 5.57e-36 125
MS.gene021989.t1 AT5G62165 45.223 157 65 3 1 147 1 146 5.57e-36 125
MS.gene021989.t1 AT5G62165 45.223 157 65 3 1 147 1 146 5.57e-36 125
MS.gene021989.t1 AT5G62165 45.223 157 65 3 1 147 1 146 5.57e-36 125
MS.gene021989.t1 AT5G62165 45.223 157 65 3 1 147 1 146 5.57e-36 125
MS.gene021989.t1 AT2G14210 44.048 168 93 1 1 168 1 167 6.23e-36 127
MS.gene021989.t1 AT5G62165 45.223 157 85 1 1 157 1 156 1.32e-35 125
MS.gene021989.t1 AT5G62165 45.223 157 85 1 1 157 1 156 1.32e-35 125
MS.gene021989.t1 AT5G51860 42.045 176 98 3 1 174 1 174 1.68e-35 125
MS.gene021989.t1 AT1G71692 42.935 184 98 2 1 177 1 184 2.25e-35 125
MS.gene021989.t1 AT2G22540 39.881 168 100 1 1 168 1 167 3.02e-35 126
MS.gene021989.t1 AT2G22540 39.881 168 100 1 1 168 1 167 3.02e-35 126
MS.gene021989.t1 AT4G37940 46.853 143 74 2 1 143 1 141 3.24e-35 124
MS.gene021989.t1 AT5G51860 39.175 194 108 4 1 192 1 186 3.28e-35 125
MS.gene021989.t1 AT5G10140 42.197 173 88 3 1 169 1 165 1.33e-34 122
MS.gene021989.t1 AT3G57390 42.778 180 95 2 1 173 1 179 7.65e-34 122
MS.gene021989.t1 AT5G23260 39.151 212 111 6 1 211 17 211 1.34e-33 122
MS.gene021989.t1 AT3G57390 42.778 180 95 2 1 173 1 179 1.57e-33 122
MS.gene021989.t1 AT5G20240 39.429 175 96 3 1 174 1 166 2.11e-33 120
MS.gene021989.t1 AT5G10140 45.270 148 73 2 1 148 1 140 2.15e-33 119
MS.gene021989.t1 AT5G10140 45.270 148 73 2 1 148 1 140 2.65e-33 120
MS.gene021989.t1 AT5G10140 45.270 148 73 2 1 148 1 140 3.24e-33 119
MS.gene021989.t1 AT5G65050 41.420 169 91 2 1 169 1 161 3.47e-33 119
MS.gene021989.t1 AT5G51870 45.205 146 78 2 1 145 1 145 8.86e-33 117
MS.gene021989.t1 AT5G65050 41.420 169 91 2 1 169 1 161 1.25e-32 118
MS.gene021989.t1 AT5G65050 40.237 169 82 2 1 169 1 150 2.85e-32 117
MS.gene021989.t1 AT5G51870 45.205 146 78 2 1 145 24 168 3.32e-32 117
MS.gene021989.t1 AT5G65060 37.895 190 103 3 1 183 1 182 3.54e-32 117
MS.gene021989.t1 AT5G65060 39.053 169 95 2 1 169 1 161 1.35e-31 115
MS.gene021989.t1 AT5G20240 44.681 141 72 2 1 140 1 136 1.87e-31 114
MS.gene021989.t1 AT5G65050 39.884 173 92 3 1 169 1 165 5.19e-31 113
MS.gene021989.t1 AT5G23260 43.243 148 80 3 1 147 1 145 6.57e-31 115
MS.gene021989.t1 AT5G65060 37.870 169 86 2 1 169 1 150 1.08e-30 112
MS.gene021989.t1 AT5G65070 40.000 190 101 4 1 189 1 178 1.70e-30 112
MS.gene021989.t1 AT4G24540 40.000 175 104 1 1 175 1 174 3.33e-30 112
MS.gene021989.t1 AT5G62165 70.833 72 20 1 1 72 1 71 3.83e-30 108
MS.gene021989.t1 AT2G22540 36.905 168 100 1 1 168 1 162 4.83e-30 112
MS.gene021989.t1 AT3G54340 37.368 190 113 3 1 189 1 185 2.32e-28 108
MS.gene021989.t1 AT5G65080 39.873 158 85 3 1 157 8 156 7.23e-28 105
MS.gene021989.t1 AT5G65070 36.279 215 105 6 1 189 1 209 4.26e-27 104
MS.gene021989.t1 AT1G31140 42.105 152 78 3 1 147 1 147 3.47e-25 99.4
MS.gene021989.t1 AT1G31140 42.105 152 80 4 1 147 1 149 7.05e-25 98.6
MS.gene021989.t1 AT1G77080 35.294 187 99 2 1 180 1 172 7.88e-25 97.4
MS.gene021989.t1 AT5G65070 41.611 149 77 3 1 148 1 140 8.11e-25 96.3
MS.gene021989.t1 AT5G65070 34.404 218 106 5 1 189 1 210 2.32e-24 97.8
MS.gene021989.t1 AT1G77080 35.795 176 91 2 1 169 1 161 4.28e-24 95.5
MS.gene021989.t1 AT5G65080 39.103 156 86 3 1 156 8 154 7.35e-24 95.5
MS.gene021989.t1 AT1G77080 35.795 176 91 2 1 169 1 161 8.55e-24 95.1
MS.gene021989.t1 AT5G65070 61.972 71 27 0 1 71 1 71 1.27e-23 95.1
MS.gene021989.t1 AT1G77080 34.197 193 98 4 1 169 1 188 6.23e-21 88.2
MS.gene021989.t1 AT1G77980 54.054 74 34 0 1 74 1 74 9.51e-21 89.7
MS.gene021989.t1 AT1G22130 55.714 70 31 0 1 70 1 70 1.23e-20 89.7
MS.gene021989.t1 AT1G77080 35.503 169 97 3 1 169 1 157 5.99e-20 85.1
MS.gene021989.t1 AT1G69120 40.179 112 67 0 63 174 1 112 4.49e-19 82.8
MS.gene021989.t1 AT1G77950 52.857 70 33 0 1 70 1 70 3.97e-18 81.3
MS.gene021989.t1 AT1G77950 52.857 70 33 0 1 70 1 70 3.97e-18 81.3
MS.gene021989.t1 AT1G77950 52.857 70 33 0 1 70 1 70 3.97e-18 81.3
MS.gene021989.t1 AT1G77950 52.857 70 33 0 1 70 1 70 3.97e-18 81.3
MS.gene021989.t1 AT1G77080 35.032 157 90 3 1 157 1 145 1.92e-17 77.0
MS.gene021989.t1 AT4G37435 59.649 57 23 0 1 57 1 57 9.26e-17 76.3
MS.gene021989.t1 AT1G01530 52.941 68 31 1 1 68 6 72 4.20e-16 75.9
MS.gene021989.t1 AT2G03060 45.333 75 40 1 1 74 1 75 1.79e-15 75.5
MS.gene021989.t1 AT2G03060 45.333 75 40 1 1 74 1 75 1.79e-15 75.5
MS.gene021989.t1 AT2G03060 45.333 75 40 1 1 74 1 75 1.79e-15 75.5
MS.gene021989.t1 AT2G03060 45.333 75 40 1 1 74 1 75 2.28e-15 75.1
MS.gene021989.t1 AT1G65360 43.421 76 42 1 1 76 6 80 3.58e-15 72.8
MS.gene021989.t1 AT5G60910 38.596 114 66 2 63 174 1 112 8.18e-15 70.9
MS.gene021989.t1 AT1G18750 52.632 57 27 0 1 57 1 57 1.22e-14 73.2
MS.gene021989.t1 AT1G18750 52.632 57 27 0 1 57 1 57 1.34e-14 72.8
MS.gene021989.t1 AT1G18750 52.632 57 27 0 1 57 1 57 1.68e-14 72.8
MS.gene021989.t1 AT4G36590 53.333 60 28 0 2 61 7 66 6.39e-14 69.7
MS.gene021989.t1 AT5G60440 46.377 69 36 1 2 70 7 74 7.61e-14 70.1
MS.gene021989.t1 AT1G69540 28.025 157 90 4 1 157 1 134 8.66e-14 70.5
MS.gene021989.t1 AT1G69540 28.025 157 90 4 1 157 1 134 8.68e-14 70.5
MS.gene021989.t1 AT1G72350 46.377 69 34 1 2 70 43 108 3.57e-13 67.4
MS.gene021989.t1 AT2G24840 45.714 70 37 1 1 70 62 130 5.21e-13 67.4
MS.gene021989.t1 AT3G04100 43.836 73 40 1 2 74 14 85 5.87e-13 66.2
MS.gene021989.t1 AT3G66656 47.368 57 30 0 1 57 1 57 6.79e-13 65.5
MS.gene021989.t1 AT2G34440 34.906 106 63 3 1 105 1 101 7.66e-13 65.1
MS.gene021989.t1 AT1G29962 50.000 60 30 0 2 61 8 67 1.21e-11 62.4
MS.gene021989.t1 AT1G47760 36.607 112 61 5 1 108 1 106 1.23e-11 62.4
MS.gene021989.t1 AT1G28460 48.333 60 31 0 2 61 8 67 6.35e-11 60.1

Find 41 sgRNAs with CRISPR-Local

Find 224 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATCTTTCAGTTCTGATTAT+AGG 0.166644 7.1:-80129604 MS.gene021989:intron
TGATTGCCTGTAGTGATTTC+TGG 0.197665 7.1:+80130247 None:intergenic
ATTGGCTGATCTTCAAAATA+AGG 0.303924 7.1:-80131135 MS.gene021989:intron
AATAGCTACCTCAAGTTCTT+TGG 0.310821 7.1:+80132549 None:intergenic
CAGCACCATAACTGCACTTC+TGG 0.351179 7.1:+80132590 None:intergenic
TGAGCAGCTTGAACGGCAAT+TGG 0.374852 7.1:-80131997 MS.gene021989:CDS
GCAATCCTACATTGCAGATT+GGG 0.382564 7.1:-80130145 MS.gene021989:intron
CTTGGGGCCACTAAGTTCTA+AGG 0.401577 7.1:-80132024 MS.gene021989:CDS
ACAATTCATGCTGGACCAAT+TGG 0.407437 7.1:-80131153 MS.gene021989:CDS
CAAGTGAATGGATTTGTTCC+TGG 0.418508 7.1:-80129530 MS.gene021989:CDS
TCAGAGCTTCTTCCAGCAGC+TGG 0.423930 7.1:-80130171 MS.gene021989:CDS
ACATTTGCAAAGAGAAGAAA+TGG 0.428741 7.1:-80134372 MS.gene021989:CDS
GCATGCTCAAAACTCTTGAT+AGG 0.431018 7.1:-80132615 MS.gene021989:CDS
TCAAGATCCTTAGAACTTAG+TGG 0.434757 7.1:+80132017 None:intergenic
TGCAATCCTACATTGCAGAT+TGG 0.436020 7.1:-80130146 MS.gene021989:CDS
GAAATCACTACAGGCAATCA+TGG 0.441544 7.1:-80130244 MS.gene021989:CDS
GAGGAAGAGTTGAGTTGAAG+AGG 0.453499 7.1:-80134422 MS.gene021989:CDS
ATATTGCATGCTTTGATCAC+CGG 0.459468 7.1:+80130217 None:intergenic
GGTGATCAAAGCATGCAATA+TGG 0.460751 7.1:-80130215 MS.gene021989:CDS
GTTTCAGCTTCAAGTATTCA+CGG 0.476057 7.1:+80132206 None:intergenic
AGGTACCAGAAGTGCAGTTA+TGG 0.477506 7.1:-80132595 MS.gene021989:CDS
TTCTGTTCTTTGTGATGCTG+AGG 0.481866 7.1:-80134325 MS.gene021989:CDS
GCTACCTCAAGTTCTTTGGC+AGG 0.490765 7.1:+80132553 None:intergenic
TAGGATTGCAATCCAGCTGC+TGG 0.491957 7.1:+80130159 None:intergenic
CAAGCTCAACAACAAGTGAA+TGG 0.495301 7.1:-80129542 MS.gene021989:CDS
TATTACCCAATCTGCAATGT+AGG 0.507401 7.1:+80130140 None:intergenic
CTCAATTATAGCATCCATCC+AGG 0.520557 7.1:+80129512 None:intergenic
CTTATCATCTTCTCTACTCG+TGG 0.542095 7.1:-80134297 MS.gene021989:CDS
GAACAGATCCTTGTCAATCA+AGG 0.552989 7.1:-80131010 MS.gene021989:intron
TCAATTCCAGAAATCACTAC+AGG 0.554040 7.1:-80130253 MS.gene021989:CDS
TACAGGCAATCATGGGAAGC+CGG 0.554692 7.1:-80130236 MS.gene021989:CDS
AGGATCTTGAGCAGCTTGAA+CGG 0.572971 7.1:-80132004 MS.gene021989:CDS
TTTGCAGACACAATTCATGC+TGG 0.573767 7.1:-80131162 MS.gene021989:intron
TTTGTTACAGGAACATATGT+TGG 0.580851 7.1:-80131040 MS.gene021989:intron
TGAATGGATTTGTTCCTGGA+TGG 0.588184 7.1:-80129526 MS.gene021989:CDS
AAATCACTACAGGCAATCAT+GGG 0.592196 7.1:-80130243 MS.gene021989:CDS
CAAACCTGCCAAAGAACTTG+AGG 0.622488 7.1:-80132557 MS.gene021989:intron
ATTCATCTCTGAAGCAAGTG+AGG 0.626186 7.1:-80131974 MS.gene021989:CDS
TGTGTTTACCTTGATTGACA+AGG 0.630709 7.1:+80131002 None:intergenic
GAAGCAAGTGAGGTCAACAA+AGG 0.665671 7.1:-80131964 MS.gene021989:intron
AAAATCTTCAAAGAACACAG+AGG 0.732334 7.1:-80132174 MS.gene021989:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAATATATTTATATACTTC+TGG - chr7.1:80130383-80130402 MS.gene021989:intron 10.0%
!! AAAAAAGAAGTAAAAATAAG+TGG + chr7.1:80132528-80132547 None:intergenic 15.0%
!! AAAAATCAAATCAAAATTCT+TGG + chr7.1:80129943-80129962 None:intergenic 15.0%
!! AAGTCAAAACATATATATAA+AGG + chr7.1:80134315-80134334 None:intergenic 15.0%
!! AATACAATCTTATTATGAAT+GGG + chr7.1:80132572-80132591 None:intergenic 15.0%
!! ATAAGAAAATGTAAATCAAA+TGG + chr7.1:80132677-80132696 None:intergenic 15.0%
!! CCATAAAATAATTCAAATTT+AGG + chr7.1:80132469-80132488 None:intergenic 15.0%
!! TATCTATTGCAAATATTATA+AGG - chr7.1:80130638-80130657 MS.gene021989:intron 15.0%
!! TTATTTATTTATTTGTCATC+CGG + chr7.1:80133960-80133979 None:intergenic 15.0%
!!! AAAAAAAAGAAACTTTTAGA+TGG - chr7.1:80133583-80133602 MS.gene021989:intron 15.0%
!!! AATTAATAGTGTTGATATAT+TGG + chr7.1:80131846-80131865 None:intergenic 15.0%
!!! CCTAAATTTGAATTATTTTA+TGG - chr7.1:80132466-80132485 MS.gene021989:intron 15.0%
!!! GATAACTTTTAGTAAAAATA+AGG - chr7.1:80130833-80130852 MS.gene021989:intron 15.0%
!!! TGATTTTCTCAAATTATTAA+CGG + chr7.1:80133324-80133343 None:intergenic 15.0%
!! AAAATAAGGAATATTGAAAC+TGG - chr7.1:80130847-80130866 MS.gene021989:intron 20.0%
!! AATGTAATACATTACAATTG+TGG + chr7.1:80131055-80131074 None:intergenic 20.0%
!! AATTAATAAAGCAACTTCTT+TGG - chr7.1:80132858-80132877 MS.gene021989:intron 20.0%
!! ACAGTTAACAATTTAAGTAA+AGG - chr7.1:80131155-80131174 MS.gene021989:CDS 20.0%
!! ATTAATAAAGCAACTTCTTT+GGG - chr7.1:80132859-80132878 MS.gene021989:intron 20.0%
!! CAGTTAACAATTTAAGTAAA+GGG - chr7.1:80131156-80131175 MS.gene021989:CDS 20.0%
!! GAATACAATCTTATTATGAA+TGG + chr7.1:80132573-80132592 None:intergenic 20.0%
!! TAAGATATAAGAAAGAAACA+AGG + chr7.1:80130189-80130208 None:intergenic 20.0%
!! TAGAACTTTCTTAATTAACA+TGG - chr7.1:80132025-80132044 MS.gene021989:CDS 20.0%
!! TAGTCAAATATATTATCAGA+AGG + chr7.1:80133650-80133669 None:intergenic 20.0%
!! TCAAAACATATATATAAAGG+TGG + chr7.1:80134312-80134331 None:intergenic 20.0%
!! TGTACAAGAAATATCTATTA+TGG - chr7.1:80133241-80133260 MS.gene021989:intron 20.0%
!! TTAATAAATGCATTACTCTA+TGG + chr7.1:80130361-80130380 None:intergenic 20.0%
!! TTGAAGATTTATTCATTTGA+TGG - chr7.1:80130977-80130996 MS.gene021989:intron 20.0%
!! TTTAGTGTAATTATATGTGT+TGG - chr7.1:80133349-80133368 MS.gene021989:intron 20.0%
!!! AAAAAAACATTTGTTTTCCA+TGG + chr7.1:80130700-80130719 None:intergenic 20.0%
!!! AATTAAGTTGTTTATCTTTC+TGG - chr7.1:80130291-80130310 MS.gene021989:intron 20.0%
!!! ACTGTCTTTGTTTTATTTTT+GGG - chr7.1:80130086-80130105 MS.gene021989:intron 20.0%
!!! ATATCAGTGTTGATTATAAA+TGG + chr7.1:80131427-80131446 None:intergenic 20.0%
!!! ATTAATTTCCATGTTTTCTT+TGG - chr7.1:80130234-80130253 MS.gene021989:CDS 20.0%
!!! CAATATTTCAGAAATCTTTT+AGG - chr7.1:80131893-80131912 MS.gene021989:intron 20.0%
!!! CTAAAAGATTTCTGAAATAT+TGG + chr7.1:80131895-80131914 None:intergenic 20.0%
!!! GAAATCAATGTTTTAAAAAC+TGG + chr7.1:80134269-80134288 None:intergenic 20.0%
!!! GAATTTCATTTTCTAATCAA+AGG + chr7.1:80132285-80132304 None:intergenic 20.0%
!!! GTATAACTTCAATTTTTCTT+AGG - chr7.1:80132428-80132447 MS.gene021989:intron 20.0%
!!! TAAAATGAGTGTATTTTGTA+CGG + chr7.1:80131482-80131501 None:intergenic 20.0%
!!! TGCGTTATTGTTTTAAAAAA+CGG - chr7.1:80133863-80133882 MS.gene021989:intron 20.0%
! AAAACAGATTGAAACAAACA+CGG - chr7.1:80134021-80134040 MS.gene021989:intron 25.0%
! AAATGTTTATGTCCTTTGTA+CGG - chr7.1:80130037-80130056 MS.gene021989:intron 25.0%
! AAGCAATGTTTCAATGAAAA+AGG + chr7.1:80130136-80130155 None:intergenic 25.0%
! ACCAATTAAATCGTTTAGTT+CGG - chr7.1:80134242-80134261 MS.gene021989:intron 25.0%
! AGGCTATTAGATAAAAGATA+GGG - chr7.1:80130455-80130474 MS.gene021989:intron 25.0%
! ATAATCAGAACTGAAAGATA+GGG + chr7.1:80134342-80134361 None:intergenic 25.0%
! CTACATCACAATAATATTCA+AGG + chr7.1:80132729-80132748 None:intergenic 25.0%
! GCACAAGAATGTTATTAAAA+TGG - chr7.1:80131092-80131111 MS.gene021989:intron 25.0%
! GTTATTAAAATGGCACAATA+TGG - chr7.1:80131102-80131121 MS.gene021989:intron 25.0%
! TATAATCAGAACTGAAAGAT+AGG + chr7.1:80134343-80134362 None:intergenic 25.0%
! TCAATGAATTCAAGAATTCA+AGG + chr7.1:80130571-80130590 None:intergenic 25.0%
! TCGTTCAATTTAGCATTAAA+TGG + chr7.1:80132102-80132121 None:intergenic 25.0%
! TTATTCATTTGATGGAAACT+GGG - chr7.1:80130985-80131004 MS.gene021989:intron 25.0%
! TTTATAAGTCTTTCAATCCA+TGG - chr7.1:80130680-80130699 MS.gene021989:intron 25.0%
! TTTATTCATTTGATGGAAAC+TGG - chr7.1:80130984-80131003 MS.gene021989:intron 25.0%
!! TATCTTTCAGTTCTGATTAT+AGG - chr7.1:80134342-80134361 MS.gene021989:CDS 25.0%
!! TCAATTTTTCTTAGGTCATT+TGG - chr7.1:80132436-80132455 MS.gene021989:intron 25.0%
!! TGCATTTTCTTGCAATATAA+AGG + chr7.1:80133036-80133055 None:intergenic 25.0%
!!! CTCATATTTGTTTTGAATTG+TGG - chr7.1:80132992-80133011 MS.gene021989:intron 25.0%
!!! CTGTCTTTGTTTTATTTTTG+GGG - chr7.1:80130087-80130106 MS.gene021989:intron 25.0%
!!! GACTGTCTTTGTTTTATTTT+TGG - chr7.1:80130085-80130104 MS.gene021989:intron 25.0%
!!! GCTGCAACATAATTTTTTTT+AGG + chr7.1:80133101-80133120 None:intergenic 25.0%
!!! TGACTATAATTTGTTTCAGT+TGG - chr7.1:80133664-80133683 MS.gene021989:intron 25.0%
!!! TGTCTTTGTTTTATTTTTGG+GGG - chr7.1:80130088-80130107 MS.gene021989:intron 25.0%
!!! TTTGACATTTTTTTTCTTCC+TGG - chr7.1:80131296-80131315 MS.gene021989:intron 25.0%
AAAATCTTCAAAGAACACAG+AGG - chr7.1:80131772-80131791 MS.gene021989:intron 30.0%
AACGATTTAATTGGTTGAAC+TGG + chr7.1:80134237-80134256 None:intergenic 30.0%
ACAATAATATTCAAGGAGAG+GGG + chr7.1:80132722-80132741 None:intergenic 30.0%
ACATTTGCAAAGAGAAGAAA+TGG - chr7.1:80129574-80129593 MS.gene021989:CDS 30.0%
ACCGAACTAAACGATTTAAT+TGG + chr7.1:80134246-80134265 None:intergenic 30.0%
ACGAGATTCAAATCATGAAT+CGG + chr7.1:80132617-80132636 None:intergenic 30.0%
AGTTGTAACACTATTACCTT+AGG - chr7.1:80132057-80132076 MS.gene021989:intron 30.0%
ATTGGCTGATCTTCAAAATA+AGG - chr7.1:80132811-80132830 MS.gene021989:intron 30.0%
CAACCTGACTACATTATAAT+TGG - chr7.1:80134087-80134106 MS.gene021989:intron 30.0%
CAAGTACATGTAGATCTAAT+AGG + chr7.1:80129807-80129826 None:intergenic 30.0%
CACAATAATATTCAAGGAGA+GGG + chr7.1:80132723-80132742 None:intergenic 30.0%
CGCATAAATTATTATGCAAG+AGG + chr7.1:80133847-80133866 None:intergenic 30.0%
CTAACTAAATTTCGTGTAGT+CGG - chr7.1:80132385-80132404 MS.gene021989:intron 30.0%
CTAAGACCAATTCTAAATTG+TGG + chr7.1:80133463-80133482 None:intergenic 30.0%
GAGATGAATATCATGTATAC+TGG + chr7.1:80132975-80132994 None:intergenic 30.0%
GAGGCTATTAGATAAAAGAT+AGG - chr7.1:80130454-80130473 MS.gene021989:intron 30.0%
GATCCAATTATAATGTAGTC+AGG + chr7.1:80134093-80134112 None:intergenic 30.0%
GATCTTCAAAATAAGGTACA+TGG - chr7.1:80132818-80132837 MS.gene021989:intron 30.0%
GCATAGACAATTTACATTGA+AGG + chr7.1:80131245-80131264 None:intergenic 30.0%
GTTTAACCTGTAATCAACTT+TGG - chr7.1:80134052-80134071 MS.gene021989:intron 30.0%
TAAGGAATATTGAAACTGGT+TGG - chr7.1:80130851-80130870 MS.gene021989:intron 30.0%
TACAAAGATGACAGAATAAG+TGG + chr7.1:80132411-80132430 None:intergenic 30.0%
TATTCCGAACACATTCTATA+CGG + chr7.1:80131553-80131572 None:intergenic 30.0%
TCACAATAATATTCAAGGAG+AGG + chr7.1:80132724-80132743 None:intergenic 30.0%
TCTCAAATTATTAACGGTGT+AGG + chr7.1:80133318-80133337 None:intergenic 30.0%
TTCATGATTTGAATCTCGTT+TGG - chr7.1:80132618-80132637 MS.gene021989:intron 30.0%
TTTGTTACAGGAACATATGT+TGG - chr7.1:80132906-80132925 MS.gene021989:intron 30.0%
! AAGTTGATTACAGGTTAAAC+CGG + chr7.1:80134052-80134071 None:intergenic 30.0%
! ATTGAACCAAAGTTGATTAC+AGG + chr7.1:80134061-80134080 None:intergenic 30.0%
! CGGAATGCAATTTAAAACAA+TGG - chr7.1:80133155-80133174 MS.gene021989:intron 30.0%
!! AAATCTTTTAGGTGAAGACT+TGG - chr7.1:80131904-80131923 MS.gene021989:intron 30.0%
!! AATCTTTTAGGTGAAGACTT+GGG - chr7.1:80131905-80131924 MS.gene021989:intron 30.0%
!! CTATAATTTGTTTCAGTTGG+AGG - chr7.1:80133667-80133686 MS.gene021989:intron 30.0%
!! TATTTTGAAGATCAGCCAAT+TGG + chr7.1:80132811-80132830 None:intergenic 30.0%
!! TCAAGCTATTGTTTTGTTAC+AGG - chr7.1:80132894-80132913 MS.gene021989:intron 30.0%
AAATCACTACAGGCAATCAT+GGG - chr7.1:80133703-80133722 MS.gene021989:intron 35.0%
AAATGGAGATACGACTCATA+TGG + chr7.1:80132085-80132104 None:intergenic 35.0%
AATAGCTACCTCAAGTTCTT+TGG + chr7.1:80131400-80131419 None:intergenic 35.0%
ACCAAAAAGTAACCGTACAA+AGG + chr7.1:80130052-80130071 None:intergenic 35.0%
ATATTGCATGCTTTGATCAC+CGG + chr7.1:80133732-80133751 None:intergenic 35.0%
CAATTGAACCAATAACCTAG+AGG + chr7.1:80133911-80133930 None:intergenic 35.0%
CGATTTAACCAAAGTTGAAC+CGG - chr7.1:80133938-80133957 MS.gene021989:intron 35.0%
GAAACCGTATAGAATGTGTT+CGG - chr7.1:80131546-80131565 MS.gene021989:intron 35.0%
GTATGATGGTTTATGAAGCA+CGG + chr7.1:80133416-80133435 None:intergenic 35.0%
GTTTCAGCTTCAAGTATTCA+CGG + chr7.1:80131743-80131762 None:intergenic 35.0%
TAAGAAACTACATTGAGCAG+TGG + chr7.1:80132654-80132673 None:intergenic 35.0%
TATTACCCAATCTGCAATGT+AGG + chr7.1:80133809-80133828 None:intergenic 35.0%
TCAAGATCCTTAGAACTTAG+TGG + chr7.1:80131932-80131951 None:intergenic 35.0%
TCAATTCCAGAAATCACTAC+AGG - chr7.1:80133693-80133712 MS.gene021989:intron 35.0%
TGGAAACAAGTCGAATTCAA+AGG + chr7.1:80134217-80134236 None:intergenic 35.0%
TGTGTTTACCTTGATTGACA+AGG + chr7.1:80132947-80132966 None:intergenic 35.0%
TTGAAATCTGTTGATGTTGC+TGG - chr7.1:80130592-80130611 MS.gene021989:intron 35.0%
! ACCTAATCTTCTTCTAGCTA+TGG + chr7.1:80133187-80133206 None:intergenic 35.0%
! AGAGTCTTATCTATCTGATG+TGG - chr7.1:80134118-80134137 MS.gene021989:intron 35.0%
! AGTGTATTTTGTACGGTGTT+GGG + chr7.1:80131475-80131494 None:intergenic 35.0%
! ATTTACATTGAAGGTGTGTC+AGG + chr7.1:80131236-80131255 None:intergenic 35.0%
! CCTAATCTTCTTCTAGCTAT+GGG + chr7.1:80133186-80133205 None:intergenic 35.0%
! GAGTCTTATCTATCTGATGT+GGG - chr7.1:80134119-80134138 MS.gene021989:intron 35.0%
! TACGGACCACAATTTAGAAT+TGG - chr7.1:80133454-80133473 MS.gene021989:intron 35.0%
! TGACGAACTTTTTGCAGAAA+GGG - chr7.1:80130426-80130445 MS.gene021989:intron 35.0%
! TGTTTGGTTTCAACATGTGT+CGG + chr7.1:80132260-80132279 None:intergenic 35.0%
! TTGACGAACTTTTTGCAGAA+AGG - chr7.1:80130425-80130444 MS.gene021989:intron 35.0%
! TTTCTAATCAAAGGCGTGTT+TGG + chr7.1:80132276-80132295 None:intergenic 35.0%
!! ATCTTTTAGGTGAAGACTTG+GGG - chr7.1:80131906-80131925 MS.gene021989:intron 35.0%
!! CTCTAGGTTATTGGTTCAAT+TGG - chr7.1:80133909-80133928 MS.gene021989:intron 35.0%
!! TACACTCATTTTAGTGCGTT+TGG - chr7.1:80131489-80131508 MS.gene021989:intron 35.0%
!! TTTTCTTTGGAAGCTTGGTT+AGG - chr7.1:80130247-80130266 MS.gene021989:CDS 35.0%
!!! TCCTTTGTACGGTTACTTTT+TGG - chr7.1:80130048-80130067 MS.gene021989:intron 35.0%
!!! TTGGGGGTGTTTTTGATATT+AGG - chr7.1:80130104-80130123 MS.gene021989:intron 35.0%
AACAGTTCAATGTAACCAGC+AGG + chr7.1:80132753-80132772 None:intergenic 40.0%
ACAATTCATGCTGGACCAAT+TGG - chr7.1:80132793-80132812 MS.gene021989:intron 40.0%
AGCAACCGTAATTGCAGTTA+CGG - chr7.1:80133436-80133455 MS.gene021989:intron 40.0%
ATCAAATGAGTGAGACCTCT+AGG - chr7.1:80133893-80133912 MS.gene021989:intron 40.0%
ATCTATCTGATGTGGGACAT+GGG - chr7.1:80134126-80134145 MS.gene021989:intron 40.0%
ATGAATCTCTAGCGTGTATC+TGG - chr7.1:80132307-80132326 MS.gene021989:intron 40.0%
CAAGCTCAACAACAAGTGAA+TGG - chr7.1:80134404-80134423 MS.gene021989:CDS 40.0%
CAATTACGGTTGCTGTATGA+TGG + chr7.1:80133430-80133449 None:intergenic 40.0%
CACATGTGTCTGTATCATGT+TGG - chr7.1:80132225-80132244 MS.gene021989:intron 40.0%
CCAAGCTTCCAAAGAAAACA+TGG + chr7.1:80130245-80130264 None:intergenic 40.0%
CCCATAGCTAGAAGAAGATT+AGG - chr7.1:80133183-80133202 MS.gene021989:intron 40.0%
CTTATCATCTTCTCTACTCG+TGG - chr7.1:80129649-80129668 MS.gene021989:intron 40.0%
GAAATCACTACAGGCAATCA+TGG - chr7.1:80133702-80133721 MS.gene021989:intron 40.0%
GAACAGATCCTTGTCAATCA+AGG - chr7.1:80132936-80132955 MS.gene021989:intron 40.0%
GCAATCCTACATTGCAGATT+GGG - chr7.1:80133801-80133820 MS.gene021989:intron 40.0%
GCATGCTCAAAACTCTTGAT+AGG - chr7.1:80131331-80131350 MS.gene021989:intron 40.0%
GGTCTCACTCATTTGATCTT+TGG + chr7.1:80133890-80133909 None:intergenic 40.0%
GGTGATCAAAGCATGCAATA+TGG - chr7.1:80133731-80133750 MS.gene021989:intron 40.0%
TACGACTCATATGGAACCTA+AGG + chr7.1:80132076-80132095 None:intergenic 40.0%
TATCTATCTGATGTGGGACA+TGG - chr7.1:80134125-80134144 MS.gene021989:intron 40.0%
TGAAACAAACACGGTTGAAC+CGG - chr7.1:80134030-80134049 MS.gene021989:intron 40.0%
TGATTGCCTGTAGTGATTTC+TGG + chr7.1:80133702-80133721 None:intergenic 40.0%
TGCAATCCTACATTGCAGAT+TGG - chr7.1:80133800-80133819 MS.gene021989:intron 40.0%
TGCATTACTCTATGGTTCAG+AGG + chr7.1:80130353-80130372 None:intergenic 40.0%
TTATTGTGATGTAGTCCTGC+TGG - chr7.1:80132735-80132754 MS.gene021989:intron 40.0%
TTCTGTTCTTTGTGATGCTG+AGG - chr7.1:80129621-80129640 MS.gene021989:intron 40.0%
TTGTGGCTGTTGTTATGCTA+CGG - chr7.1:80133009-80133028 MS.gene021989:intron 40.0%
TTTGCAGACACAATTCATGC+TGG - chr7.1:80132784-80132803 MS.gene021989:intron 40.0%
TTTGTCATCCGGTTCAACTT+TGG + chr7.1:80133949-80133968 None:intergenic 40.0%
! ACGAACTTTTTGCAGAAAGG+GGG - chr7.1:80130428-80130447 MS.gene021989:intron 40.0%
! CAAGTGAATGGATTTGTTCC+TGG - chr7.1:80134416-80134435 MS.gene021989:CDS 40.0%
! GACGAACTTTTTGCAGAAAG+GGG - chr7.1:80130427-80130446 MS.gene021989:intron 40.0%
! GAGTGTATTTTGTACGGTGT+TGG + chr7.1:80131476-80131495 None:intergenic 40.0%
! TGAATGGATTTGTTCCTGGA+TGG - chr7.1:80134420-80134439 MS.gene021989:CDS 40.0%
!! ATTCATCTCTGAAGCAAGTG+AGG - chr7.1:80131972-80131991 MS.gene021989:CDS 40.0%
!! CCATGTTTTCTTTGGAAGCT+TGG - chr7.1:80130242-80130261 MS.gene021989:CDS 40.0%
!! GTGTATTTTGTACGGTGTTG+GGG + chr7.1:80131474-80131493 None:intergenic 40.0%
AGGATCTTGAGCAGCTTGAA+CGG - chr7.1:80131942-80131961 MS.gene021989:intron 45.0%
AGTCGATGCAGATGAAATCG+CGG - chr7.1:80133055-80133074 MS.gene021989:intron 45.0%
CAAACCTGCCAAAGAACTTG+AGG - chr7.1:80131389-80131408 MS.gene021989:intron 45.0%
CTTGGTTAGGTGACTCTTGA+TGG - chr7.1:80130260-80130279 MS.gene021989:CDS 45.0%
GAAGCAAGTGAGGTCAACAA+AGG - chr7.1:80131982-80132001 MS.gene021989:CDS 45.0%
GAGTGAGACCTCTAGGTTAT+TGG - chr7.1:80133900-80133919 MS.gene021989:intron 45.0%
GATGTTGCTGGAAATTGTGC+TGG - chr7.1:80130604-80130623 MS.gene021989:intron 45.0%
GTGGTCCGTAACTGCAATTA+CGG + chr7.1:80133444-80133463 None:intergenic 45.0%
TATGAAGCACGGACACTACT+CGG + chr7.1:80133405-80133424 None:intergenic 45.0%
TGGTTGTGGTAGCAATCACA+CGG - chr7.1:80133129-80133148 MS.gene021989:intron 45.0%
! AGGTACCAGAAGTGCAGTTA+TGG - chr7.1:80131351-80131370 MS.gene021989:intron 45.0%
! CGAACTTTTTGCAGAAAGGG+GGG - chr7.1:80130429-80130448 MS.gene021989:intron 45.0%
! GAACTTTTTGCAGAAAGGGG+GGG - chr7.1:80130430-80130449 MS.gene021989:intron 45.0%
!! ATATGTGTTGGTGTCGTGTC+CGG - chr7.1:80133361-80133380 MS.gene021989:intron 45.0%
!! GAGGAAGAGTTGAGTTGAAG+AGG - chr7.1:80129524-80129543 MS.gene021989:CDS 45.0%
!! GCATGCTGTTTCAACAAACC+AGG + chr7.1:80131317-80131336 None:intergenic 45.0%
!! AATATTTAACTATAAAAAAT+AGG + chr7.1:80131821-80131840 None:intergenic 5.0%
!! ATATATAATTTATTAAACTA+AGG + chr7.1:80133486-80133505 None:intergenic 5.0%
AACCGCATGTGTCAGCAACT+CGG - chr7.1:80131193-80131212 MS.gene021989:intron 50.0%
AGGAGAGGGGCTATTGCATA+AGG + chr7.1:80132709-80132728 None:intergenic 50.0%
CAGCACCATAACTGCACTTC+TGG + chr7.1:80131359-80131378 None:intergenic 50.0%
CTTGGGGCCACTAAGTTCTA+AGG - chr7.1:80131922-80131941 MS.gene021989:intron 50.0%
GCTACCTCAAGTTCTTTGGC+AGG + chr7.1:80131396-80131415 None:intergenic 50.0%
TACAGGCAATCATGGGAAGC+CGG - chr7.1:80133710-80133729 MS.gene021989:intron 50.0%
TAGGATTGCAATCCAGCTGC+TGG + chr7.1:80133790-80133809 None:intergenic 50.0%
TGAGCAGCTTGAACGGCAAT+TGG - chr7.1:80131949-80131968 MS.gene021989:intron 50.0%
TGCTACCACAACCACAACTG+CGG + chr7.1:80133123-80133142 None:intergenic 50.0%
TGGTAGCAATCACACGGTTG+CGG - chr7.1:80133135-80133154 MS.gene021989:intron 50.0%
TTATGTTGCAGCCGCAGTTG+TGG - chr7.1:80133109-80133128 MS.gene021989:intron 50.0%
!! TCAGCAACTCGGTGTCATGT+CGG - chr7.1:80131204-80131223 MS.gene021989:intron 50.0%
CACCGAGTTGCTGACACATG+CGG + chr7.1:80131198-80131217 None:intergenic 55.0%
TACTCGGACAAGGTGTGTCC+CGG + chr7.1:80133389-80133408 None:intergenic 55.0%
TCAGAGCTTCTTCCAGCAGC+TGG - chr7.1:80133775-80133794 MS.gene021989:intron 55.0%
! TTTTGCAGAAAGGGGGGGAG+AGG - chr7.1:80130435-80130454 MS.gene021989:intron 55.0%
!! CACCAAGCCCAAAGAGTGCT+GGG + chr7.1:80134177-80134196 None:intergenic 55.0%
!! GGCTTGGTGCGTGAATCAGT+AGG - chr7.1:80134188-80134207 MS.gene021989:intron 55.0%
CCTCACGCCCAGCACTCTTT+GGG - chr7.1:80134167-80134186 MS.gene021989:intron 60.0%
GACAAGGTGTGTCCCGGTAC+CGG + chr7.1:80133383-80133402 None:intergenic 60.0%
GCACGGACACTACTCGGACA+AGG + chr7.1:80133399-80133418 None:intergenic 60.0%
TGCAGCCGCAGTTGTGGTTG+TGG - chr7.1:80133115-80133134 MS.gene021989:intron 60.0%
! GCACCAAGCCCAAAGAGTGC+TGG + chr7.1:80134178-80134197 None:intergenic 60.0%
!! AAAGAGTGCTGGGCGTGAGG+GGG + chr7.1:80134167-80134186 None:intergenic 60.0%
!! CAAAGAGTGCTGGGCGTGAG+GGG + chr7.1:80134168-80134187 None:intergenic 60.0%
!! CCAAAGAGTGCTGGGCGTGA+GGG + chr7.1:80134169-80134188 None:intergenic 60.0%
!! GTTGGTGTCGTGTCCGGTAC+CGG - chr7.1:80133367-80133386 MS.gene021989:intron 60.0%
!! TTGGTGTCGTGTCCGGTACC+GGG - chr7.1:80133368-80133387 MS.gene021989:intron 60.0%
CCCTCACGCCCAGCACTCTT+TGG - chr7.1:80134166-80134185 MS.gene021989:intron 65.0%
CGCCCAGCACTCTTTGGGCT+TGG - chr7.1:80134172-80134191 MS.gene021989:intron 65.0%
! GGGCGTGAGGGGGGTGTATT+GGG + chr7.1:80134157-80134176 None:intergenic 65.0%
! TGGGCGTGAGGGGGGTGTAT+TGG + chr7.1:80134158-80134177 None:intergenic 65.0%
!! AAGAGTGCTGGGCGTGAGGG+GGG + chr7.1:80134166-80134185 None:intergenic 65.0%
!! CCCAAAGAGTGCTGGGCGTG+AGG + chr7.1:80134170-80134189 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 80129517 80134451 80129517 ID=MS.gene021989
chr7.1 mRNA 80129517 80134451 80129517 ID=MS.gene021989.t1;Parent=MS.gene021989
chr7.1 exon 80134267 80134451 80134267 ID=MS.gene021989.t1.exon1;Parent=MS.gene021989.t1
chr7.1 CDS 80134267 80134451 80134267 ID=cds.MS.gene021989.t1;Parent=MS.gene021989.t1
chr7.1 exon 80132558 80132636 80132558 ID=MS.gene021989.t1.exon2;Parent=MS.gene021989.t1
chr7.1 CDS 80132558 80132636 80132558 ID=cds.MS.gene021989.t1;Parent=MS.gene021989.t1
chr7.1 exon 80132175 80132239 80132175 ID=MS.gene021989.t1.exon3;Parent=MS.gene021989.t1
chr7.1 CDS 80132175 80132239 80132175 ID=cds.MS.gene021989.t1;Parent=MS.gene021989.t1
chr7.1 exon 80131965 80132064 80131965 ID=MS.gene021989.t1.exon4;Parent=MS.gene021989.t1
chr7.1 CDS 80131965 80132064 80131965 ID=cds.MS.gene021989.t1;Parent=MS.gene021989.t1
chr7.1 exon 80131136 80131177 80131136 ID=MS.gene021989.t1.exon5;Parent=MS.gene021989.t1
chr7.1 CDS 80131136 80131177 80131136 ID=cds.MS.gene021989.t1;Parent=MS.gene021989.t1
chr7.1 exon 80131011 80131052 80131011 ID=MS.gene021989.t1.exon6;Parent=MS.gene021989.t1
chr7.1 CDS 80131011 80131052 80131011 ID=cds.MS.gene021989.t1;Parent=MS.gene021989.t1
chr7.1 exon 80130146 80130285 80130146 ID=MS.gene021989.t1.exon7;Parent=MS.gene021989.t1
chr7.1 CDS 80130146 80130285 80130146 ID=cds.MS.gene021989.t1;Parent=MS.gene021989.t1
chr7.1 exon 80129517 80129616 80129517 ID=MS.gene021989.t1.exon8;Parent=MS.gene021989.t1
chr7.1 CDS 80129517 80129616 80129517 ID=cds.MS.gene021989.t1;Parent=MS.gene021989.t1
Gene Sequence

>MS.gene021989

ATGGGAAGAGGAAGAGTTGAGTTGAAGAGGATAGAGAACAAGATAAACAGACAAGTTACATTTGCAAAGAGAAGAAATGGTCTTCTTAAGAAAGCTTATGAACTTTCTGTTCTTTGTGATGCTGAGGTTGCTCTTATCATCTTCTCTACTCGTGGAAAGCTTTATGAATTTTGTAGCACATCTAAGTATGCAATCTTTCTCTCTTTATATGAATTTTTGTTCTTGTTTTTAATTTTATATTTGTGTTTTTAATTTTATAATTTGTGAAAGTACTTTCTCTTTTTTGACCTATTAGATCTACATGTACTTGCTTCATTATTTTAATTATTTTTTATTTAGACTAGACAAAGTTATAGCTTCGTCTTAAACATTTTTAGTTATTTTTTAATCAATTTTTTGTATCATTTTCATAATTATTTTTGTCCAAGAATTTTGATTTGATTTTTTGTGTGTAATATGTTGCAAATGATAACAGATTTATCAGATCTAGTAAAATTGTACATGATCTGATGAATATCTAAAATGTTTATGTCCTTTGTACGGTTACTTTTTGGTTTAGATTATTGTTGACTGTCTTTGTTTTATTTTTGGGGGTGTTTTTGATATTAGGTTTTAACCTTTTTCATTGAAACATTGCTTTAGAGCTTATAAATTTTAGATCAAGATTTTCCTTGTTTCTTTCTTATATCTTAAATTAAATTTTAGATCATGATTTTTATTAATTTCCATGTTTTCTTTGGAAGCTTGGTTAGGTGACTCTTGATGGACAAATTCAATTAAGTTGTTTATCTTTCTGGATAATACTAACTACTTCTAGTTATTACACAAACATTCCTCTGAACCATAGAGTAATGCATTTATTAAAATTAATATATTTATATACTTCTGGAAAAAATTGTCTTTTGTTTTTGACGAACTTTTTGCAGAAAGGGGGGGAGAGGCTATTAGATAAAAGATAGGGTGAAGATATTATATCTAGATGTAACAGTGTAATATACAAATTTATTTTGACTATGATGTCACTTTGACACTTTCAAAGTTTCTATTATATCCTTGAATTCTTGAATTCATTGATTTGAAATCTGTTGATGTTGCTGGAAATTGTGCTGGATTTGCTAATATATCTATTGCAAATATTATAAGGTTATGAAGAATCTCATTGATTTATAAGTCTTTCAATCCATGGAAAACAAATGTTTTTTTTTCATTTGTGATTTTTTTTATTTTAATAAATAATCTTGATTCATGAAAGAAAAAAAAAACATTGTTATTGTTGTTTTTATCAATTTCTGATTGAAATTAAAAAAAAATATTTTGATAACTTTTAGTAAAAATAAGGAATATTGAAACTGGTTGGATATATATTTTGTGTTTTTATTTTATATTTTTAATGATATTTATAAAAGTATCATTGAATTTTATTTTATTTTAGACATCTAAATATAATTAATCTCTTGTCTTTGAAGATTTATTCATTTGATGGAAACTGGGCTTTAGATTTTGATATAATTTTTTAAAATAGATTACTGCTCTTTCCACAATTGTAATGTATTACATTTTTTCATTTTTGATGATGCACAAGAATGTTATTAAAATGGCACAATATGGTTCATTTGTTGTTGACATCACTATGTAAACACAGTTAACAATTTAAGTAAAGGGAGCTAATTGAATTTAACCGCATGTGTCAGCAACTCGGTGTCATGTCGGTAGACACCTGACACACCTTCAATGTAAATTGTCTATGCTATAAAGATAATTCATAATCATAATCATCAATTTGACATTTTTTTTCTTCCTGGTTTGTTGAAACAGCATGCTCAAAACTCTTGATAGGTACCAGAAGTGCAGTTATGGTGCTGTAGAAGTTAGCAAACCTGCCAAAGAACTTGAGGTAGCTATTGCTTCCATTTATAATCAACACTGATATTTGAACACATATCTGACATTGTATCCCCAACACCGTACAAAATACACTCATTTTAGTGCGTTTGGATTCTGAGAAAAGAGAAAAATTAATATAGAATCAGAAACCGTATAGAATGTGTTCGGAATACGTTGTCTGATGTCAACTTCTAATGTATAAAAAACATTTCTGATTTATATATATAAATTTGAAGCAGATTTATAACTTATCTTATATTATTTATTGCATATTGTATTCTTTTGTAAATGTTCTATTATTTTTCATTTGTTTTTTCTTTTGATAAAGCAGAGCAGCTACCGTGAATACTTGAAGCTGAAACAAAGATTTGAAAATCTTCAAAGAACACAGAGGTGAAGAACTTAACATTAAATTTTCCTATTTTTTATAGTTAAATATTTGCCAATATATCAACACTATTAATTGTGTGTGTATGTGTATGTTTGTGTCTCCAATATTTCAGAAATCTTTTAGGTGAAGACTTGGGGCCACTAAGTTCTAAGGATCTTGAGCAGCTTGAACGGCAATTGGATTCATCTCTGAAGCAAGTGAGGTCAACAAAGGTATTTGTTTCAGAAAATAAATAGAACTTTCTTAATTAACATGGTTCTTAATTAGTTGTAACACTATTACCTTAGGTTCCATATGAGTCGTATCTCCATTTAATGCTAAATTGAACGATCTATGAAGCACATACACAGACAGACATCAGACACGACACTAACACTTCAACAACATCAGAAATAATTTGAGAAAATAAATTGTTTGATAGCACTCACATTCTCACATGTGTCTGTATCATGTTGGTGTTGAACACCGACACATGTTGAAACCAAACACGCCTTTGATTAGAAAATGAAATTCATATGAATCTCTAGCGTGTATCTGGTCAACATGACTCTCATCTTAATTTTTGATGAATTCTAATTCATTCTAATGATTTACTAACTAAATTTCGTGTAGTCGGCCACTTATTCTGTCATCTTTGTATAACTTCAATTTTTCTTAGGTCATTTGGTACATTACCTAAATTTGAATTATTTTATGGTTCATATATGATATATTAGTTTATAATTTTGTTTTGCCACTTATTTTTACTTCTTTTTTTTTTTTTTGACAATATATCTTCCCATTCATAATAAGATTGTATTCACAATTCAGAAAAAATTTAGTCCGATTCATGATTTGAATCTCGTTTGGATAACGATTTCCACTGCTCAATGTAGTTTCTTACCATTTGATTTACATTTTCTTATTTAGTTTTTCCTTATGCAATAGCCCCTCTCCTTGAATATTATTGTGATGTAGTCCTGCTGGTTACATTGAACTGTTTGTGATATCAATTTGCAGACACAATTCATGCTGGACCAATTGGCTGATCTTCAAAATAAGGTACATGGTTTGACATATCTAAAGAAATTAATAAAGCAACTTCTTTGGGTGTCTAACAATTTCAAGCTATTGTTTTGTTACAGGAACATATGTTGGTTGAAGCGAACAGATCCTTGTCAATCAAGGTAAACACATTATGCCAGTATACATGATATTCATCTCATATTTGTTTTGAATTGTGGCTGTTGTTATGCTACGGACCTTTATATTGCAAGAAAATGCAGTCGATGCAGATGAAATCGCGGTTGTGATTTCATTGCAGAGACCTAAAAAAAATTATGTTGCAGCCGCAGTTGTGGTTGTGGTAGCAATCACACGGTTGCGGAATGCAATTTAAAACAATGGTTCTTCCCATAGCTAGAAGAAGATTAGGTTTGTTGCATGCTTCTATATCTTGCTGCATAACTATGTACAAGAAATATCTATTATGGTTTTAAATTGCACTTACAGTCACAGTTGCACACGACACAAACACTGACACGCCTACACCGTTAATAATTTGAGAAAATCACATAATTTAGTGTAATTATATGTGTTGGTGTCGTGTCCGGTACCGGGACACACCTTGTCCGAGTAGTGTCCGTGCTTCATAAACCATCATACAGCAACCGTAATTGCAGTTACGGACCACAATTTAGAATTGGTCTTAGCCTTAGTTTAATAAATTATATATGCTATCTTTTCTGTTAAGATATTTTATTACTCTTTAATTTTCTTCAAAGAGTTCTAAGATTGTTTGAGAAAGCGAAGAAAAAAAAGAAACTTTTAGATGGAAATGTTACTATGAATTGTTCAATATCTCTTCAAATTTAGTCCTTCTGATAATATATTTGACTATAATTTGTTTCAGTTGGAGGAAATCAATTCCAGAAATCACTACAGGCAATCATGGGAAGCCGGTGATCAAAGCATGCAATATGGTGATCAGCAGAATGCTCACTCTCAGAGCTTCTTCCAGCAGCTGGATTGCAATCCTACATTGCAGATTGGGTAATATACTAATTTTTTGAACCTCTTGCATAATAATTTATGCGTTATTGTTTTAAAAAACGGACCAAAGATCAAATGAGTGAGACCTCTAGGTTATTGGTTCAATTGGCTCAATCGATTTAACCAAAGTTGAACCGGATGACAAATAAATAAATAAATATTTAAAAAGAAAAAACAAATAAATAGAAATTATAAATGAAAACAGATTGAAACAAACACGGTTGAACCGGTTTAACCTGTAATCAACTTTGGTTCAATCTGATTCAACCTGACTACATTATAATTGGATCTGTTAAGAGTCTTATCTATCTGATGTGGGACATGGGCTTTTCCCAATACACCCCCCTCACGCCCAGCACTCTTTGGGCTTGGTGCGTGAATCAGTAGGTGACCTTTGAATTCGACTTGTTTCCAGTTCAACCAATTAAATCGTTTAGTTCGGTCCAGTTTTTAAAACATTGATTTCAATATTCTAATCATTTGAATCCACCTTTATATATATGTTTTGACTTGTGTCCCTATCTTTCAGTTCTGATTATAGGTACAACAATGTAGCTTCAGATCAGATAGCTTCAACAAGTCAAGCTCAACAACAAGTGAATGGATTTGTTCCTGGATGGATGCTATAA
Protein sequence

>MS.gene021989.t1

MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFCSTSNMLKTLDRYQKCSYGAVEVSKPAKELEQSSYREYLKLKQRFENLQRTQRNLLGEDLGPLSSKDLEQLERQLDSSLKQVRSTKTQFMLDQLADLQNKEHMLVEANRSLSIKLEEINSRNHYRQSWEAGDQSMQYGDQQNAHSQSFFQQLDCNPTLQIGSDYRYNNVASDQIASTSQAQQQVNGFVPGWML