Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022063.t1 | XP_013447731.1 | 90.9 | 375 | 32 | 2 | 1 | 374 | 1 | 374 | 1.10E-120 | 443.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022063.t1 | Q9FYG7 | 52.3 | 111 | 46 | 2 | 74 | 184 | 47 | 150 | 3.4e-22 | 107.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022063.t1 | A0A072TXB5 | 90.9 | 375 | 32 | 2 | 1 | 374 | 1 | 374 | 7.8e-121 | 443.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene022063.t1 | TF | TCP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022063.t1 | MTR_7g018500 | 96.000 | 375 | 13 | 2 | 1 | 374 | 1 | 374 | 0.0 | 738 |
| MS.gene022063.t1 | MTR_6g017055 | 48.876 | 356 | 101 | 16 | 74 | 367 | 67 | 403 | 1.88e-76 | 242 |
| MS.gene022063.t1 | MTR_1g103380 | 36.031 | 383 | 160 | 15 | 43 | 357 | 120 | 485 | 1.03e-44 | 160 |
| MS.gene022063.t1 | MTR_4g111935 | 33.083 | 266 | 143 | 10 | 5 | 246 | 14 | 268 | 9.87e-28 | 112 |
| MS.gene022063.t1 | MTR_2g078200 | 53.846 | 65 | 30 | 0 | 116 | 180 | 15 | 79 | 6.57e-17 | 80.9 |
| MS.gene022063.t1 | MTR_2g090960 | 51.562 | 64 | 31 | 0 | 116 | 179 | 19 | 82 | 1.61e-16 | 80.1 |
| MS.gene022063.t1 | MTR_8g463380 | 52.308 | 65 | 31 | 0 | 116 | 180 | 49 | 113 | 1.87e-16 | 80.9 |
| MS.gene022063.t1 | MTR_4g079580 | 52.308 | 65 | 31 | 0 | 116 | 180 | 17 | 81 | 2.00e-16 | 79.7 |
| MS.gene022063.t1 | MTR_6g015350 | 47.561 | 82 | 41 | 1 | 120 | 201 | 48 | 127 | 4.17e-16 | 79.0 |
| MS.gene022063.t1 | MTR_7g015010 | 51.667 | 60 | 29 | 0 | 120 | 179 | 56 | 115 | 1.88e-14 | 74.3 |
| MS.gene022063.t1 | MTR_4g109660 | 48.333 | 60 | 31 | 0 | 120 | 179 | 55 | 114 | 5.10e-13 | 69.3 |
| MS.gene022063.t1 | MTR_3g026050 | 48.333 | 60 | 31 | 0 | 120 | 179 | 56 | 115 | 2.62e-12 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022063.t1 | AT1G67260 | 37.687 | 268 | 130 | 11 | 74 | 313 | 47 | 305 | 2.58e-34 | 130 |
| MS.gene022063.t1 | AT1G67260 | 37.687 | 268 | 130 | 11 | 74 | 313 | 47 | 305 | 2.58e-34 | 130 |
| MS.gene022063.t1 | AT1G67260 | 37.313 | 268 | 131 | 11 | 74 | 313 | 47 | 305 | 3.19e-34 | 130 |
| MS.gene022063.t1 | AT1G68800 | 54.867 | 113 | 42 | 4 | 121 | 230 | 112 | 218 | 1.64e-25 | 106 |
| MS.gene022063.t1 | AT1G68800 | 54.867 | 113 | 42 | 4 | 121 | 230 | 112 | 218 | 2.07e-25 | 105 |
| MS.gene022063.t1 | AT3G18550 | 39.216 | 153 | 69 | 3 | 114 | 242 | 141 | 293 | 6.60e-22 | 97.1 |
| MS.gene022063.t1 | AT3G18550 | 37.580 | 157 | 70 | 4 | 114 | 242 | 141 | 297 | 1.03e-20 | 93.6 |
| MS.gene022063.t1 | AT3G18550 | 36.943 | 157 | 71 | 3 | 114 | 242 | 141 | 297 | 1.53e-20 | 92.8 |
| MS.gene022063.t1 | AT3G18550 | 36.943 | 157 | 71 | 3 | 114 | 242 | 141 | 297 | 1.53e-20 | 92.8 |
| MS.gene022063.t1 | AT4G18390 | 37.671 | 146 | 87 | 3 | 104 | 249 | 27 | 168 | 2.62e-18 | 85.9 |
| MS.gene022063.t1 | AT4G18390 | 37.671 | 146 | 87 | 3 | 104 | 249 | 27 | 168 | 2.62e-18 | 85.9 |
| MS.gene022063.t1 | AT1G30210 | 53.968 | 63 | 29 | 0 | 117 | 179 | 46 | 108 | 1.42e-16 | 80.1 |
| MS.gene022063.t1 | AT1G30210 | 53.968 | 63 | 29 | 0 | 117 | 179 | 46 | 108 | 1.42e-16 | 80.1 |
| MS.gene022063.t1 | AT1G53230 | 51.515 | 66 | 32 | 0 | 116 | 181 | 44 | 109 | 2.11e-16 | 80.5 |
| MS.gene022063.t1 | AT1G53230 | 51.515 | 66 | 32 | 0 | 116 | 181 | 44 | 109 | 2.11e-16 | 80.5 |
| MS.gene022063.t1 | AT3G15030 | 52.308 | 65 | 31 | 0 | 116 | 180 | 40 | 104 | 2.55e-16 | 80.5 |
| MS.gene022063.t1 | AT3G15030 | 52.308 | 65 | 31 | 0 | 116 | 180 | 40 | 104 | 2.55e-16 | 80.5 |
| MS.gene022063.t1 | AT3G15030 | 52.308 | 65 | 31 | 0 | 116 | 180 | 40 | 104 | 2.55e-16 | 80.5 |
| MS.gene022063.t1 | AT3G15030 | 52.308 | 65 | 31 | 0 | 116 | 180 | 40 | 104 | 2.55e-16 | 80.5 |
| MS.gene022063.t1 | AT2G31070 | 51.562 | 64 | 31 | 0 | 116 | 179 | 24 | 87 | 5.30e-16 | 79.0 |
| MS.gene022063.t1 | AT3G02150 | 53.333 | 60 | 28 | 0 | 120 | 179 | 73 | 132 | 9.82e-15 | 74.3 |
| MS.gene022063.t1 | AT3G02150 | 53.333 | 60 | 28 | 0 | 120 | 179 | 73 | 132 | 1.56e-14 | 74.7 |
| MS.gene022063.t1 | AT5G60970 | 46.667 | 60 | 32 | 0 | 120 | 179 | 62 | 121 | 8.03e-13 | 69.3 |
| MS.gene022063.t1 | AT5G08070 | 45.000 | 60 | 33 | 0 | 120 | 179 | 32 | 91 | 2.26e-11 | 63.9 |
| MS.gene022063.t1 | AT5G08070 | 45.000 | 60 | 33 | 0 | 120 | 179 | 32 | 91 | 2.26e-11 | 63.9 |
Find 63 sgRNAs with CRISPR-Local
Find 70 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTCAACTTATTGCTCTTT+AGG | 0.129653 | 7.1:-78240735 | MS.gene022063:CDS |
| ATCCTGATACACTAACAAAT+TGG | 0.193845 | 7.1:-78240506 | MS.gene022063:CDS |
| GCCCAATTTGTTAGTGTATC+AGG | 0.208804 | 7.1:+78240504 | None:intergenic |
| CTCCAATGTTATCACCAAAT+TGG | 0.217754 | 7.1:-78239777 | MS.gene022063:CDS |
| GTTAGTGTATCAGGATTAAT+TGG | 0.223236 | 7.1:+78240513 | None:intergenic |
| CTTCGAAGACGAAGGATTCT+AGG | 0.286350 | 7.1:-78240071 | MS.gene022063:CDS |
| TGTGAAGAAGAAGATGAATT+AGG | 0.330614 | 7.1:+78240693 | None:intergenic |
| TTCGATCTTCAAGACATGTT+AGG | 0.334610 | 7.1:-78240294 | MS.gene022063:CDS |
| TTTGAAGTTTCATCCTCATT+AGG | 0.336904 | 7.1:+78239934 | None:intergenic |
| TTATTATTAGCATCCCAATT+TGG | 0.341400 | 7.1:+78239763 | None:intergenic |
| TCATGAGAATCACTATTATT+AGG | 0.353829 | 7.1:+78239802 | None:intergenic |
| GTTGTTGTTATTGTTGTTGT+TGG | 0.372004 | 7.1:+78240617 | None:intergenic |
| AATATCAGCTAATATCGATT+TGG | 0.375751 | 7.1:+78239493 | None:intergenic |
| TCAGGGGTAAGAAAAGTAAA+AGG | 0.386359 | 7.1:+78240660 | None:intergenic |
| TTCTTAGCCGGTTTCTTCAC+CGG | 0.405185 | 7.1:+78240399 | None:intergenic |
| GAGCCATTCAAGTGTGTTGC+TGG | 0.409129 | 7.1:+78240260 | None:intergenic |
| TTCAAATCTTTGGAAAATCA+TGG | 0.409744 | 7.1:-78239534 | MS.gene022063:CDS |
| AAAGTTGTTGATGTTGTTGT+TGG | 0.410045 | 7.1:+78240593 | None:intergenic |
| TCTTGATATTGCAGAAAAGT+TGG | 0.410463 | 7.1:+78239714 | None:intergenic |
| TCCAATGTTATCACCAAATT+GGG | 0.411724 | 7.1:-78239776 | MS.gene022063:CDS |
| CTAAAGATAGAAAGATGAAA+AGG | 0.414926 | 7.1:-78240107 | MS.gene022063:CDS |
| CTATGCCTGTCTTTCTTAGC+CGG | 0.420461 | 7.1:+78240387 | None:intergenic |
| TCTTCTTCGTCTTCCGATGA+AGG | 0.430527 | 7.1:-78240147 | MS.gene022063:CDS |
| TCCTGATACACTAACAAATT+GGG | 0.434497 | 7.1:-78240505 | MS.gene022063:CDS |
| TCGATCTTCAAGACATGTTA+GGG | 0.442491 | 7.1:-78240293 | MS.gene022063:CDS |
| AGCAAGAACAACATAGCTTC+TGG | 0.450038 | 7.1:-78240198 | MS.gene022063:CDS |
| TGATGAGTTGTTTGTGTGTA+GGG | 0.490224 | 7.1:+78240543 | None:intergenic |
| AAAGAAACCGGTGAAGAAAC+CGG | 0.491500 | 7.1:-78240406 | MS.gene022063:CDS |
| TCAAGAATGAATCTATCATC+AGG | 0.494794 | 7.1:-78239697 | MS.gene022063:intron |
| AATAACAATGATGCTGTCAC+TGG | 0.496363 | 7.1:-78239742 | MS.gene022063:CDS |
| AAATTTGCTCACAAAGAAAC+CGG | 0.498565 | 7.1:-78240418 | MS.gene022063:CDS |
| CATTAGGCATCAATTGATGA+AGG | 0.499616 | 7.1:+78239950 | None:intergenic |
| CCTAAAGAGCAATAAGTTGA+AGG | 0.500471 | 7.1:+78240735 | None:intergenic |
| AGCAAGATTCACACATCTCA+AGG | 0.503482 | 7.1:-78240366 | MS.gene022063:CDS |
| ATCTTCTTCATCTCCTTCAT+CGG | 0.512276 | 7.1:+78240134 | None:intergenic |
| AAAGATGAAAAGGGCACAGA+AGG | 0.517893 | 7.1:-78240097 | MS.gene022063:CDS |
| TAAAGATAGAAAGATGAAAA+GGG | 0.526209 | 7.1:-78240106 | MS.gene022063:CDS |
| TCAAATCTTTGGAAAATCAT+GGG | 0.526493 | 7.1:-78239533 | MS.gene022063:CDS |
| GAACTTCCTCGCGATCTCGA+TGG | 0.528472 | 7.1:+78240317 | None:intergenic |
| AGAAAACAAGAGCAAGAGCA+AGG | 0.530089 | 7.1:-78240047 | MS.gene022063:CDS |
| AAGCCAGCAACACACTTGAA+TGG | 0.532128 | 7.1:-78240263 | MS.gene022063:CDS |
| TCATCAATTGATGCCTAATG+AGG | 0.536962 | 7.1:-78239947 | MS.gene022063:CDS |
| TTCGAAGACGAAGGATTCTA+GGG | 0.537014 | 7.1:-78240070 | MS.gene022063:CDS |
| TGATATCTTTAACTTCATTG+AGG | 0.548363 | 7.1:-78239896 | MS.gene022063:CDS |
| GGGGTAAGAAAAGTAAAAGG+AGG | 0.548490 | 7.1:+78240663 | None:intergenic |
| TTAGGATTATAACAAGGGTA+AGG | 0.556043 | 7.1:+78240711 | None:intergenic |
| TAGGGAACAGAAATTGCTGC+TGG | 0.557496 | 7.1:+78240561 | None:intergenic |
| TCCCAATTTGGTGATAACAT+TGG | 0.563066 | 7.1:+78239775 | None:intergenic |
| AGAAACCGGCTAAGAAAGAC+AGG | 0.565124 | 7.1:-78240392 | MS.gene022063:CDS |
| ATGAATTAGGATTATAACAA+GGG | 0.570279 | 7.1:+78240706 | None:intergenic |
| GGGTAAGAAAAGTAAAAGGA+GGG | 0.575339 | 7.1:+78240664 | None:intergenic |
| ATGATGAGTTGTTTGTGTGT+AGG | 0.581066 | 7.1:+78240542 | None:intergenic |
| CAGCTAATATCGATTTGGAC+TGG | 0.588709 | 7.1:+78239498 | None:intergenic |
| GAAAACAAGAGCAAGAGCAA+GGG | 0.591086 | 7.1:-78240046 | MS.gene022063:CDS |
| GATGAATTAGGATTATAACA+AGG | 0.592158 | 7.1:+78240705 | None:intergenic |
| GACTTTCCATCGAGATCGCG+AGG | 0.608900 | 7.1:-78240323 | MS.gene022063:CDS |
| CTCAAGGGTTGAGAGACAGA+AGG | 0.613193 | 7.1:-78240350 | MS.gene022063:CDS |
| TCAAGGGTTGAGAGACAGAA+GGG | 0.623957 | 7.1:-78240349 | MS.gene022063:CDS |
| AATCTTTGGAAAATCATGGG+AGG | 0.624471 | 7.1:-78239530 | MS.gene022063:CDS |
| GCAAGATTCACACATCTCAA+GGG | 0.635283 | 7.1:-78240365 | MS.gene022063:CDS |
| GAAGGAATCTTCGAAGACGA+AGG | 0.639563 | 7.1:-78240079 | MS.gene022063:CDS |
| GCTTCTGGCGATGACGACGA+TGG | 0.659720 | 7.1:-78240183 | MS.gene022063:CDS |
| ATGTTGAAACAAGATCTAAG+TGG | 0.698091 | 7.1:-78240462 | MS.gene022063:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACATAAAATTAATTAACAAA+AGG | - | chr7.1:78240609-78240628 | MS.gene022063:CDS | 10.0% |
| !!! | TTTTAGGTTTAAACTTTTTA+GGG | - | chr7.1:78240684-78240703 | MS.gene022063:CDS | 15.0% |
| !!! | TTTTTAGGTTTAAACTTTTT+AGG | - | chr7.1:78240683-78240702 | MS.gene022063:CDS | 15.0% |
| !! | ATGAATTAGGATTATAACAA+GGG | + | chr7.1:78239539-78239558 | None:intergenic | 20.0% |
| !! | TAAAGATAGAAAGATGAAAA+GGG | - | chr7.1:78240136-78240155 | MS.gene022063:CDS | 20.0% |
| !!! | TTGTGATACTTACAATTTTT+AGG | - | chr7.1:78240668-78240687 | MS.gene022063:CDS | 20.0% |
| ! | CTAAAGATAGAAAGATGAAA+AGG | - | chr7.1:78240135-78240154 | MS.gene022063:CDS | 25.0% |
| ! | GATGAATTAGGATTATAACA+AGG | + | chr7.1:78239540-78239559 | None:intergenic | 25.0% |
| ! | TCATGAGAATCACTATTATT+AGG | + | chr7.1:78240443-78240462 | None:intergenic | 25.0% |
| ! | TTATTATTAGCATCCCAATT+TGG | + | chr7.1:78240482-78240501 | None:intergenic | 25.0% |
| !! | TCAAATCTTTGGAAAATCAT+GGG | - | chr7.1:78240709-78240728 | MS.gene022063:CDS | 25.0% |
| !! | TGATATCTTTAACTTCATTG+AGG | - | chr7.1:78240346-78240365 | MS.gene022063:CDS | 25.0% |
| !! | TTCAAATCTTTGGAAAATCA+TGG | - | chr7.1:78240708-78240727 | MS.gene022063:CDS | 25.0% |
| !!! | TGTTGATTTTGATCAATTTC+AGG | + | chr7.1:78240269-78240288 | None:intergenic | 25.0% |
| AAAGTTGTTGATGTTGTTGT+TGG | + | chr7.1:78239652-78239671 | None:intergenic | 30.0% | |
| ATCCTGATACACTAACAAAT+TGG | - | chr7.1:78239736-78239755 | MS.gene022063:CDS | 30.0% | |
| ATGTTGAAACAAGATCTAAG+TGG | - | chr7.1:78239780-78239799 | MS.gene022063:CDS | 30.0% | |
| GTTAGTGTATCAGGATTAAT+TGG | + | chr7.1:78239732-78239751 | None:intergenic | 30.0% | |
| TCAAGAATGAATCTATCATC+AGG | - | chr7.1:78240545-78240564 | MS.gene022063:CDS | 30.0% | |
| TCCAATGTTATCACCAAATT+GGG | - | chr7.1:78240466-78240485 | MS.gene022063:CDS | 30.0% | |
| TCCTGATACACTAACAAATT+GGG | - | chr7.1:78239737-78239756 | MS.gene022063:CDS | 30.0% | |
| TCTTGATATTGCAGAAAAGT+TGG | + | chr7.1:78240531-78240550 | None:intergenic | 30.0% | |
| TGTGAAGAAGAAGATGAATT+AGG | + | chr7.1:78239552-78239571 | None:intergenic | 30.0% | |
| TTAGGATTATAACAAGGGTA+AGG | + | chr7.1:78239534-78239553 | None:intergenic | 30.0% | |
| ! | AAATTTGCTCACAAAGAAAC+CGG | - | chr7.1:78239824-78239843 | MS.gene022063:CDS | 30.0% |
| ! | GTTGTTGTTATTGTTGTTGT+TGG | + | chr7.1:78239628-78239647 | None:intergenic | 30.0% |
| ! | TTTGAAGTTTCATCCTCATT+AGG | + | chr7.1:78240311-78240330 | None:intergenic | 30.0% |
| !!! | TAGTAGAAGCATTTTGATCA+GGG | + | chr7.1:78239602-78239621 | None:intergenic | 30.0% |
| !!! | TTAGTAGAAGCATTTTGATC+AGG | + | chr7.1:78239603-78239622 | None:intergenic | 30.0% |
| !!! | TTTTTAGGGCTTCAAATCTT+TGG | - | chr7.1:78240698-78240717 | MS.gene022063:CDS | 30.0% |
| AATAACAATGATGCTGTCAC+TGG | - | chr7.1:78240500-78240519 | MS.gene022063:CDS | 35.0% | |
| ATCTTCTTCATCTCCTTCAT+CGG | + | chr7.1:78240111-78240130 | None:intergenic | 35.0% | |
| ATGATGAGTTGTTTGTGTGT+AGG | + | chr7.1:78239703-78239722 | None:intergenic | 35.0% | |
| CATTAGGCATCAATTGATGA+AGG | + | chr7.1:78240295-78240314 | None:intergenic | 35.0% | |
| CCTTCAACTTATTGCTCTTT+AGG | - | chr7.1:78239507-78239526 | MS.gene022063:CDS | 35.0% | |
| CTCCAATGTTATCACCAAAT+TGG | - | chr7.1:78240465-78240484 | MS.gene022063:CDS | 35.0% | |
| GGGTAAGAAAAGTAAAAGGA+GGG | + | chr7.1:78239581-78239600 | None:intergenic | 35.0% | |
| TCAGGGGTAAGAAAAGTAAA+AGG | + | chr7.1:78239585-78239604 | None:intergenic | 35.0% | |
| TCATCAATTGATGCCTAATG+AGG | - | chr7.1:78240295-78240314 | MS.gene022063:CDS | 35.0% | |
| TCGATCTTCAAGACATGTTA+GGG | - | chr7.1:78239949-78239968 | MS.gene022063:CDS | 35.0% | |
| TGATGAGTTGTTTGTGTGTA+GGG | + | chr7.1:78239702-78239721 | None:intergenic | 35.0% | |
| TTCGATCTTCAAGACATGTT+AGG | - | chr7.1:78239948-78239967 | MS.gene022063:CDS | 35.0% | |
| ! | AATCTTTGGAAAATCATGGG+AGG | - | chr7.1:78240712-78240731 | MS.gene022063:CDS | 35.0% |
| ! | CCTAAAGAGCAATAAGTTGA+AGG | + | chr7.1:78239510-78239529 | None:intergenic | 35.0% |
| ! | TCCCAATTTGGTGATAACAT+TGG | + | chr7.1:78240470-78240489 | None:intergenic | 35.0% |
| !!! | AGTAGAAGCATTTTGATCAG+GGG | + | chr7.1:78239601-78239620 | None:intergenic | 35.0% |
| AAAGAAACCGGTGAAGAAAC+CGG | - | chr7.1:78239836-78239855 | MS.gene022063:CDS | 40.0% | |
| AGAAAACAAGAGCAAGAGCA+AGG | - | chr7.1:78240195-78240214 | MS.gene022063:CDS | 40.0% | |
| AGCAAGAACAACATAGCTTC+TGG | - | chr7.1:78240044-78240063 | MS.gene022063:CDS | 40.0% | |
| AGCAAGATTCACACATCTCA+AGG | - | chr7.1:78239876-78239895 | MS.gene022063:CDS | 40.0% | |
| GAAAACAAGAGCAAGAGCAA+GGG | - | chr7.1:78240196-78240215 | MS.gene022063:CDS | 40.0% | |
| GCAAGATTCACACATCTCAA+GGG | - | chr7.1:78239877-78239896 | MS.gene022063:CDS | 40.0% | |
| GGGGTAAGAAAAGTAAAAGG+AGG | + | chr7.1:78239582-78239601 | None:intergenic | 40.0% | |
| TTCGAAGACGAAGGATTCTA+GGG | - | chr7.1:78240172-78240191 | MS.gene022063:CDS | 40.0% | |
| ! | AAAGATGAAAAGGGCACAGA+AGG | - | chr7.1:78240145-78240164 | MS.gene022063:CDS | 40.0% |
| !! | GCCCAATTTGTTAGTGTATC+AGG | + | chr7.1:78239741-78239760 | None:intergenic | 40.0% |
| AAGCCAGCAACACACTTGAA+TGG | - | chr7.1:78239979-78239998 | MS.gene022063:CDS | 45.0% | |
| AGAAACCGGCTAAGAAAGAC+AGG | - | chr7.1:78239850-78239869 | MS.gene022063:CDS | 45.0% | |
| CTATGCCTGTCTTTCTTAGC+CGG | + | chr7.1:78239858-78239877 | None:intergenic | 45.0% | |
| CTTCGAAGACGAAGGATTCT+AGG | - | chr7.1:78240171-78240190 | MS.gene022063:CDS | 45.0% | |
| GAAGGAATCTTCGAAGACGA+AGG | - | chr7.1:78240163-78240182 | MS.gene022063:CDS | 45.0% | |
| TAGGGAACAGAAATTGCTGC+TGG | + | chr7.1:78239684-78239703 | None:intergenic | 45.0% | |
| TCAAGGGTTGAGAGACAGAA+GGG | - | chr7.1:78239893-78239912 | MS.gene022063:CDS | 45.0% | |
| TCTTCTTCGTCTTCCGATGA+AGG | - | chr7.1:78240095-78240114 | MS.gene022063:CDS | 45.0% | |
| ! | TTCTTAGCCGGTTTCTTCAC+CGG | + | chr7.1:78239846-78239865 | None:intergenic | 45.0% |
| CTCAAGGGTTGAGAGACAGA+AGG | - | chr7.1:78239892-78239911 | MS.gene022063:CDS | 50.0% | |
| GAGCCATTCAAGTGTGTTGC+TGG | + | chr7.1:78239985-78240004 | None:intergenic | 50.0% | |
| GAACTTCCTCGCGATCTCGA+TGG | + | chr7.1:78239928-78239947 | None:intergenic | 55.0% | |
| GACTTTCCATCGAGATCGCG+AGG | - | chr7.1:78239919-78239938 | MS.gene022063:CDS | 55.0% | |
| GCTTCTGGCGATGACGACGA+TGG | - | chr7.1:78240059-78240078 | MS.gene022063:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 78239501 | 78240763 | 78239501 | ID=MS.gene022063 |
| chr7.1 | mRNA | 78239501 | 78240763 | 78239501 | ID=MS.gene022063.t1;Parent=MS.gene022063 |
| chr7.1 | exon | 78239698 | 78240763 | 78239698 | ID=MS.gene022063.t1.exon1;Parent=MS.gene022063.t1 |
| chr7.1 | CDS | 78239698 | 78240763 | 78239698 | ID=cds.MS.gene022063.t1;Parent=MS.gene022063.t1 |
| chr7.1 | exon | 78239501 | 78239559 | 78239501 | ID=MS.gene022063.t1.exon2;Parent=MS.gene022063.t1 |
| chr7.1 | CDS | 78239501 | 78239559 | 78239501 | ID=cds.MS.gene022063.t1;Parent=MS.gene022063.t1 |
| Gene Sequence |
| Protein sequence |
