AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene022141

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene022141.t1 MTR_5g039760 47.938 194 74 4 26 217 12 180 2.90e-50 173
MS.gene022141.t1 MTR_7g074790 51.765 170 62 3 24 192 10 160 4.49e-45 160
MS.gene022141.t1 MTR_6g051425 33.091 275 175 4 26 293 19 291 2.77e-41 154
MS.gene022141.t1 MTR_0402s0040 38.679 212 126 3 2 211 5 214 5.16e-38 148
MS.gene022141.t1 MTR_0558s0020 33.725 255 149 4 30 264 42 296 6.73e-38 143
MS.gene022141.t1 MTR_4g102720 41.566 166 63 2 24 189 7 138 6.00e-35 132
MS.gene022141.t1 MTR_7g061980 52.252 111 51 2 24 133 10 119 1.76e-30 116
MS.gene022141.t1 MTR_6g090505 31.783 258 159 4 60 301 11 267 2.97e-30 123
MS.gene022141.t1 MTR_8g446020 35.795 176 111 1 91 264 81 256 6.71e-29 116
MS.gene022141.t1 MTR_5g015480 44.882 127 68 1 19 143 51 177 3.81e-26 108
MS.gene022141.t1 MTR_1g083640 29.130 230 143 4 30 239 57 286 4.50e-25 106
MS.gene022141.t1 MTR_1g070355 30.081 246 157 8 29 265 79 318 3.54e-23 104
MS.gene022141.t1 MTR_7g446520 29.075 227 146 2 28 254 92 303 3.75e-21 95.5
MS.gene022141.t1 MTR_2g070590 41.441 111 63 1 18 126 11 121 4.81e-21 89.4
MS.gene022141.t1 MTR_2g099430 52.874 87 41 0 47 133 26 112 4.51e-20 86.7
MS.gene022141.t1 MTR_6g017200 43.137 102 56 1 18 117 52 153 5.24e-19 84.7
MS.gene022141.t1 MTR_7g446510 29.885 174 122 0 99 272 156 329 6.30e-19 89.0
MS.gene022141.t1 MTR_4g067290 45.098 102 54 2 24 124 56 156 8.68e-19 86.7
MS.gene022141.t1 MTR_4g067290 45.098 102 54 2 24 124 56 156 9.26e-19 86.3
MS.gene022141.t1 MTR_4g067290 45.098 102 54 2 24 124 76 176 1.82e-18 86.3
MS.gene022141.t1 MTR_4g067290 45.098 102 54 2 24 124 74 174 1.97e-18 85.9
MS.gene022141.t1 MTR_4g067290 45.098 102 54 2 24 124 76 176 2.03e-18 85.9
MS.gene022141.t1 MTR_1g057920 43.750 96 52 1 18 111 28 123 2.48e-18 82.0
MS.gene022141.t1 MTR_4g067290 45.098 102 54 2 24 124 116 216 2.77e-18 86.3
MS.gene022141.t1 MTR_1g008290 33.571 140 90 2 79 218 6 142 2.85e-18 82.4
MS.gene022141.t1 MTR_4g035820 26.506 332 209 12 20 333 71 385 7.15e-18 88.2
MS.gene022141.t1 MTR_1g086270 36.585 82 52 0 318 399 1 82 8.47e-18 79.7
MS.gene022141.t1 MTR_8g067580 62.687 67 9 1 79 145 1 51 1.23e-17 77.8
MS.gene022141.t1 MTR_0337s0040 32.867 143 94 1 91 231 82 224 2.00e-17 82.4
MS.gene022141.t1 MTR_2g014100 30.102 196 117 5 30 205 50 245 2.02e-17 82.8
MS.gene022141.t1 MTR_7g446480 29.310 174 123 0 99 272 141 314 1.87e-16 81.3
MS.gene022141.t1 MTR_2g098920 42.157 102 57 2 24 124 80 180 2.95e-16 79.7
MS.gene022141.t1 MTR_7g113010 39.370 127 61 2 24 148 457 569 1.86e-15 80.5
MS.gene022141.t1 MTR_5g076070 24.153 236 172 4 21 252 50 282 2.94e-15 77.0
MS.gene022141.t1 MTR_3g006370 36.719 128 79 2 24 149 50 177 1.18e-14 74.3
MS.gene022141.t1 MTR_1g019850 32.090 134 82 2 24 155 70 196 4.10e-14 72.8
MS.gene022141.t1 MTR_3g058090 34.127 126 59 3 481 606 5 106 1.05e-13 68.2
MS.gene022141.t1 MTR_2g098880 38.182 110 65 2 21 127 58 167 6.74e-13 69.7
MS.gene022141.t1 MTR_2g098880 38.182 110 65 2 21 127 70 179 8.21e-13 69.7
MS.gene022141.t1 MTR_4g076000 68.293 41 13 0 94 134 4 44 5.32e-12 63.2
MS.gene022141.t1 MTR_1g013060 27.404 208 138 7 24 222 24 227 8.27e-12 65.9
MS.gene022141.t1 MTR_6g022080 29.932 147 98 3 36 178 97 242 1.03e-11 65.9
MS.gene022141.t1 MTR_6g022070 24.576 236 147 9 318 539 1 219 1.32e-11 67.0
MS.gene022141.t1 MTR_0734s0010 29.775 178 94 7 474 628 2 171 5.93e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene022141.t1 AT4G38180 33.007 409 269 4 24 428 73 480 8.37e-78 265
MS.gene022141.t1 AT3G22170 27.724 624 325 10 24 554 70 660 1.11e-73 254
MS.gene022141.t1 AT3G22170 27.724 624 325 10 24 554 70 660 1.11e-73 254
MS.gene022141.t1 AT4G15090 32.258 403 270 3 24 424 51 452 6.73e-71 246
MS.gene022141.t1 AT4G15090 26.977 215 139 5 448 651 551 758 5.77e-13 72.8
MS.gene022141.t1 AT4G15090 32.258 403 270 3 24 424 51 452 6.73e-71 246
MS.gene022141.t1 AT4G15090 26.977 215 139 5 448 651 551 758 5.77e-13 72.8
MS.gene022141.t1 AT4G15090 32.258 403 270 3 24 424 51 452 6.73e-71 246
MS.gene022141.t1 AT4G15090 26.977 215 139 5 448 651 551 758 5.77e-13 72.8
MS.gene022141.t1 AT4G15090 32.258 403 270 3 24 424 51 452 6.73e-71 246
MS.gene022141.t1 AT4G15090 26.977 215 139 5 448 651 551 758 5.77e-13 72.8
MS.gene022141.t1 AT4G15090 32.258 403 270 3 24 424 51 452 6.73e-71 246
MS.gene022141.t1 AT4G15090 26.977 215 139 5 448 651 551 758 5.77e-13 72.8
MS.gene022141.t1 AT1G76320 31.529 425 273 7 28 450 1 409 9.98e-60 213
MS.gene022141.t1 AT1G76320 31.481 432 278 7 28 457 1 416 2.21e-59 213
MS.gene022141.t1 AT1G76320 31.481 432 278 7 28 457 1 416 2.66e-59 213
MS.gene022141.t1 AT1G76320 31.481 432 278 7 28 457 1 416 2.66e-59 213
MS.gene022141.t1 AT3G06250 29.975 397 233 6 21 415 187 540 4.80e-57 207
MS.gene022141.t1 AT3G06250 36.275 102 51 2 24 124 28 116 4.18e-12 70.1
MS.gene022141.t1 AT3G06250 33.036 112 72 1 454 565 652 760 8.46e-12 68.9
MS.gene022141.t1 AT3G06250 29.975 397 233 6 21 415 187 540 4.80e-57 207
MS.gene022141.t1 AT3G06250 36.275 102 51 2 24 124 28 116 4.18e-12 70.1
MS.gene022141.t1 AT3G06250 33.036 112 72 1 454 565 652 760 8.46e-12 68.9
MS.gene022141.t1 AT3G06250 29.975 397 233 6 21 415 187 540 4.80e-57 207
MS.gene022141.t1 AT3G06250 36.275 102 51 2 24 124 28 116 4.18e-12 70.1
MS.gene022141.t1 AT3G06250 33.036 112 72 1 454 565 652 760 8.46e-12 68.9
MS.gene022141.t1 AT2G27110 30.402 398 247 6 24 419 49 418 3.62e-54 199
MS.gene022141.t1 AT2G27110 35.849 106 65 1 464 569 537 639 1.41e-12 71.6
MS.gene022141.t1 AT2G27110 30.402 398 247 6 24 419 49 418 3.62e-54 199
MS.gene022141.t1 AT2G27110 35.849 106 65 1 464 569 537 639 1.41e-12 71.6
MS.gene022141.t1 AT5G18960 28.109 402 243 7 18 415 205 564 1.23e-52 194
MS.gene022141.t1 AT5G18960 36.275 102 51 2 24 124 43 131 4.63e-12 69.7
MS.gene022141.t1 AT5G18960 33.036 112 72 1 454 565 676 784 2.05e-11 67.8
MS.gene022141.t1 AT5G18960 28.109 402 243 7 18 415 205 564 1.23e-52 194
MS.gene022141.t1 AT5G18960 36.275 102 51 2 24 124 43 131 4.63e-12 69.7
MS.gene022141.t1 AT5G18960 33.036 112 72 1 454 565 676 784 2.05e-11 67.8
MS.gene022141.t1 AT2G32250 27.447 470 245 11 204 595 176 627 6.59e-48 181
MS.gene022141.t1 AT2G32250 27.447 470 245 11 204 595 135 586 7.51e-48 180
MS.gene022141.t1 AT2G32250 27.447 470 245 11 204 595 176 627 7.56e-48 181
MS.gene022141.t1 AT2G32250 27.447 470 245 11 204 595 176 627 7.56e-48 181
MS.gene022141.t1 AT2G32250 27.447 470 245 11 204 595 176 627 7.56e-48 181
MS.gene022141.t1 AT2G32250 27.447 470 245 11 204 595 135 586 7.86e-48 180
MS.gene022141.t1 AT2G32250 27.447 470 245 11 204 595 176 627 1.07e-47 180
MS.gene022141.t1 AT2G32250 27.447 470 245 11 204 595 176 627 1.07e-47 180
MS.gene022141.t1 AT4G19990 27.119 413 250 7 27 424 24 400 1.95e-45 173
MS.gene022141.t1 AT4G19990 34.234 111 69 2 454 564 507 613 1.07e-11 68.6
MS.gene022141.t1 AT4G19990 27.119 413 250 7 27 424 24 400 2.76e-45 173
MS.gene022141.t1 AT4G19990 34.234 111 69 2 454 564 507 613 1.03e-11 68.6
MS.gene022141.t1 AT4G19990 27.119 413 250 7 27 424 24 400 2.76e-45 173
MS.gene022141.t1 AT4G19990 34.234 111 69 2 454 564 507 613 1.03e-11 68.6
MS.gene022141.t1 AT1G52520 30.000 400 251 10 24 415 85 463 3.00e-45 172
MS.gene022141.t1 AT4G19990 27.451 408 245 7 27 419 38 409 3.08e-45 173
MS.gene022141.t1 AT4G19990 34.234 111 69 2 454 564 521 627 1.14e-11 68.6
MS.gene022141.t1 AT4G19990 27.119 413 250 7 27 424 24 400 3.35e-45 172
MS.gene022141.t1 AT4G19990 32.432 111 71 1 454 564 507 613 9.05e-12 68.9
MS.gene022141.t1 AT4G19990 27.119 413 250 7 27 424 24 400 3.35e-45 172
MS.gene022141.t1 AT4G19990 32.432 111 71 1 454 564 507 613 9.05e-12 68.9
MS.gene022141.t1 AT2G27110 30.970 268 177 2 157 419 9 273 8.52e-45 171
MS.gene022141.t1 AT2G27110 35.849 106 65 1 464 569 392 494 1.43e-12 71.6
MS.gene022141.t1 AT1G80010 27.027 407 267 7 24 414 95 487 2.06e-44 170
MS.gene022141.t1 AT1G10240 25.225 444 318 7 18 449 42 483 5.04e-43 165
MS.gene022141.t1 AT1G10240 25.225 444 318 7 18 449 42 483 5.04e-43 165
MS.gene022141.t1 AT4G19990 27.520 367 215 7 68 419 8 338 3.55e-40 157
MS.gene022141.t1 AT4G19990 34.234 111 69 2 454 564 450 556 9.33e-12 68.9
MS.gene022141.t1 AT5G28530 24.000 425 299 10 20 425 51 470 1.55e-33 137
MS.gene022141.t1 AT5G28530 24.000 425 299 10 20 425 51 470 1.55e-33 137
MS.gene022141.t1 AT5G28530 24.000 425 299 10 20 425 51 470 1.83e-33 137
MS.gene022141.t1 AT4G38170 29.302 215 147 2 198 411 18 228 4.68e-33 134
MS.gene022141.t1 AT3G59470 43.137 102 56 2 24 124 70 170 1.70e-17 83.2
MS.gene022141.t1 AT3G59470 43.137 102 56 2 24 124 70 170 1.70e-17 83.2
MS.gene022141.t1 AT3G59470 43.137 102 56 2 24 124 82 182 2.47e-17 82.8
MS.gene022141.t1 AT3G07500 37.692 130 68 3 24 140 33 162 6.63e-14 72.0
MS.gene022141.t1 AT2G43280 35.156 128 81 2 24 149 22 149 2.24e-13 70.1
MS.gene022141.t1 AT5G28530 26.144 153 107 3 276 425 258 407 3.90e-12 70.1
MS.gene022141.t1 AT5G28530 26.144 153 107 3 276 425 258 407 3.99e-12 69.7
MS.gene022141.t1 AT4G12850 36.290 124 73 3 24 144 11 131 9.53e-12 63.5
MS.gene022141.t1 AT4G12850 36.111 108 65 2 24 130 11 115 2.94e-11 62.0

Find 119 sgRNAs with CRISPR-Local

Find 219 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACAAATCACAAATGTATTT+TGG 0.093989 7.3:-78073853 MS.gene022141:CDS
ATCTTAGATTATGGATATTT+TGG 0.112546 7.3:-78073815 MS.gene022141:CDS
TCGTTGTGTTATAGATAATT+TGG 0.139441 7.3:+78072266 None:intergenic
AGACAACGTAACATGGTTTA+TGG 0.229294 7.3:-78073962 MS.gene022141:CDS
TGTAGAAAGTTTGAGACTTT+TGG 0.232605 7.3:-78072432 MS.gene022141:CDS
TAGTTTCACTAGATTATTAA+TGG 0.236771 7.3:-78071772 MS.gene022141:intron
TAGATGAAGCTTGGCAGTTT+TGG 0.257858 7.3:-78074429 MS.gene022141:CDS
CAATAAGGAAGGAGAGTTTA+AGG 0.264884 7.3:-78072508 MS.gene022141:CDS
CTCTTTAAGATGTATTGTTC+AGG 0.314178 7.3:+78072354 None:intergenic
CTTGATCTGTGAACAAAGTT+TGG 0.328870 7.3:+78073606 None:intergenic
TTGATCTGTGAACAAAGTTT+GGG 0.334950 7.3:+78073607 None:intergenic
CGTTGTGTTATAGATAATTT+GGG 0.337324 7.3:+78072267 None:intergenic
TGTCATCACCTTGGTCAATA+AGG 0.339628 7.3:-78072523 MS.gene022141:CDS
CCCTTTGTTGTTGTCTCAAT+CGG 0.342287 7.3:+78072069 None:intergenic
AAATGACATCGCCTCTATAA+TGG 0.342845 7.3:+78073717 None:intergenic
GACAAAAGCGATTCAAAAGT+TGG 0.351490 7.3:-78072020 MS.gene022141:CDS
GAAGTCGATGTATGCTATTA+AGG 0.356692 7.3:-78073351 MS.gene022141:CDS
GTTGAGTATGGTAAAGAAAC+TGG 0.361914 7.3:-78074406 MS.gene022141:CDS
TTAATGTCAATGAAAACAAT+TGG 0.375010 7.3:-78073376 MS.gene022141:CDS
TATCTATAACACAACGATAT+AGG 0.379751 7.3:-78072260 MS.gene022141:CDS
AACAAACCTGCATGATCTAA+TGG 0.380924 7.3:+78074336 None:intergenic
TCAGTCCTTGTTTCAGCTCT+AGG 0.400631 7.3:+78074259 None:intergenic
GACAACGTAACATGGTTTAT+GGG 0.404346 7.3:-78073961 MS.gene022141:CDS
AACTGGCTTTGGTGTTAGAA+AGG 0.408770 7.3:-78074389 MS.gene022141:CDS
TTGCTCAACAATGATTAGAT+TGG 0.418493 7.3:-78072232 MS.gene022141:CDS
CAACGGTCTATTAGCATGAT+TGG 0.420431 7.3:+78073760 None:intergenic
CATAACCCATGTCGAGTCTC+TGG 0.431181 7.3:+78073548 None:intergenic
ATCTTTCAAATGGTTATTTG+AGG 0.432948 7.3:-78073660 MS.gene022141:CDS
GACATATTCAAATGGAAGTT+GGG 0.434310 7.3:+78072542 None:intergenic
ATTGCACTTAGTTCAAAGAA+TGG 0.438544 7.3:-78074223 MS.gene022141:CDS
CCATGCACTCAAGATCTTTG+AGG 0.440135 7.3:-78072397 MS.gene022141:CDS
CTTCGTCTTGTCATCAATCA+AGG 0.445012 7.3:-78071960 MS.gene022141:CDS
CTAGTGCTTTAGACATTGCC+TGG 0.451171 7.3:+78073582 None:intergenic
AGGAGAAGTTTGAGACAGCT+TGG 0.459277 7.3:-78073418 MS.gene022141:CDS
TGACATATTCAAATGGAAGT+TGG 0.461065 7.3:+78072541 None:intergenic
GGACTCTGGTTTGAGGCAAA+AGG 0.461228 7.3:-78074074 MS.gene022141:CDS
TCAGGCTTTAACCATTATAG+AGG 0.461587 7.3:-78073728 MS.gene022141:CDS
CAGATCGTCTTTCAGACATC+AGG 0.469794 7.3:-78071837 MS.gene022141:CDS
ACTAAATAAGATCTCTTGTC+CGG 0.469862 7.3:+78074289 None:intergenic
TAATGTCAATGAAAACAATT+GGG 0.472275 7.3:-78073375 MS.gene022141:CDS
CCGATTGAGACAACAACAAA+GGG 0.474960 7.3:-78072069 MS.gene022141:CDS
TCTTTAAGATGTATTGTTCA+GGG 0.480129 7.3:+78072355 None:intergenic
AAACTGCTGAATCTTTCAAA+TGG 0.482492 7.3:-78073670 MS.gene022141:CDS
ATTGAAATGGCAGAGGACTC+TGG 0.482937 7.3:-78074088 MS.gene022141:CDS
CAAGACGAAGGTTGTACAAT+CGG 0.487830 7.3:+78071973 None:intergenic
CAACAAAGGGGTATAAGAAT+CGG 0.493185 7.3:-78072056 MS.gene022141:CDS
TCAAGCATATGAGATTGAAA+TGG 0.499950 7.3:-78074101 MS.gene022141:CDS
GTAGGTGGTAGAACTAATCT+TGG 0.504428 7.3:-78074025 MS.gene022141:CDS
GTTTGAGATAACTCATGTGC+TGG 0.505179 7.3:+78071804 None:intergenic
TGGCAGAGGACTCTGGTTTG+AGG 0.506073 7.3:-78074081 MS.gene022141:CDS
GAAGCTGTAAATCGTGGTTA+TGG 0.510351 7.3:+78074170 None:intergenic
CATGCCAACACTAGGTATAG+TGG 0.514325 7.3:+78074465 None:intergenic
TTGATAGTGTAGATGAAGCT+TGG 0.514856 7.3:-78074438 MS.gene022141:CDS
CTCGACATGGGTTATGTACA+TGG 0.515437 7.3:-78073541 MS.gene022141:CDS
AGGTTTGTTTGTTGCAAGGA+GGG 0.516993 7.3:-78074322 MS.gene022141:CDS
CAGGTTTGTTTGTTGCAAGG+AGG 0.519394 7.3:-78074323 MS.gene022141:CDS
TATGGTCCTTCACAAACTCA+TGG 0.520238 7.3:+78074188 None:intergenic
AACATGGTTTATGGGGAAGT+TGG 0.523724 7.3:-78073953 MS.gene022141:CDS
CACTATACCTAGTGTTGGCA+TGG 0.524699 7.3:-78074464 MS.gene022141:CDS
GAGAGTTTAAGGAAGGAGAG+TGG 0.525939 7.3:-78072497 MS.gene022141:CDS
TTTGTTGCAAGGAGGGTCAT+CGG 0.529632 7.3:-78074315 MS.gene022141:CDS
ATGCAGGTTTGTTTGTTGCA+AGG 0.530015 7.3:-78074326 MS.gene022141:CDS
AAGGTGATGACATATTCAAA+TGG 0.530069 7.3:+78072534 None:intergenic
CCTCAAAGATCTTGAGTGCA+TGG 0.530879 7.3:+78072397 None:intergenic
AAGGAAGGAGAGTTTAAGGA+AGG 0.532049 7.3:-78072504 MS.gene022141:CDS
TCTGCAAGTTCATATAATGT+AGG 0.534767 7.3:+78072189 None:intergenic
CAAGGAGGGTCATCGGATGC+CGG 0.535041 7.3:-78074308 MS.gene022141:CDS
TTCATATAATGTAGGAGATG+TGG 0.544666 7.3:+78072197 None:intergenic
CTGAACAATACATCTTAAAG+AGG 0.548534 7.3:-78072353 MS.gene022141:CDS
TATGGTAAAGAAACTGGCTT+TGG 0.553868 7.3:-78074400 MS.gene022141:CDS
CATGTATGATTATGATCAAG+AGG 0.554480 7.3:-78073438 MS.gene022141:CDS
ATTTGAATATGTCATCACCT+TGG 0.557581 7.3:-78072532 MS.gene022141:CDS
TGGTATTATATATGATGCAA+AGG 0.557791 7.3:-78072310 MS.gene022141:CDS
ACAACTCCATTAGATCATGC+AGG 0.558799 7.3:-78074342 MS.gene022141:CDS
ATATGATGCAAAGGAAAATG+AGG 0.561756 7.3:-78072301 MS.gene022141:CDS
TGCAAAGGAAAATGAGGTTG+TGG 0.564561 7.3:-78072295 MS.gene022141:CDS
ATGAAGGAAGCATTCACTCT+AGG 0.565288 7.3:-78073308 MS.gene022141:CDS
TGAGACAGCTTGGAGCAAGT+TGG 0.566720 7.3:-78073408 MS.gene022141:CDS
GCTAGCTTGTGTGTTGTCTG+TGG 0.571863 7.3:+78074148 None:intergenic
AACAATACATCTTAAAGAGG+TGG 0.575288 7.3:-78072350 MS.gene022141:CDS
TGTAATCCATGAGTTTGTGA+AGG 0.578123 7.3:-78074194 MS.gene022141:CDS
AGCAAGAAGACAACGTAACA+TGG 0.579143 7.3:-78073969 MS.gene022141:CDS
TAATCTTGGATATACACGGT+TGG 0.580985 7.3:-78074011 MS.gene022141:CDS
TGAAGTTGGTGTTCCGACAT+TGG 0.586077 7.3:-78072097 MS.gene022141:CDS
ACATGGCACTTGATTCAGAA+TGG 0.587501 7.3:-78073524 MS.gene022141:CDS
TCAAACTCCATGCCAACACT+AGG 0.589517 7.3:+78074457 None:intergenic
CTCTCCTTCCTTATTGACCA+AGG 0.589663 7.3:+78072515 None:intergenic
ATGGGCAGCATGTCACATGA+AGG 0.590749 7.3:-78073324 MS.gene022141:CDS
ACAACGTAACATGGTTTATG+GGG 0.591002 7.3:-78073960 MS.gene022141:CDS
ATCACCTTGGTCAATAAGGA+AGG 0.592999 7.3:-78072519 MS.gene022141:CDS
CAGAATGGTATAAAACACCT+TGG 0.593491 7.3:-78073509 MS.gene022141:CDS
GCAACGGTCAATGATGAAGT+TGG 0.600961 7.3:-78072111 MS.gene022141:CDS
CAATCATGCTAATAGACCGT+TGG 0.608792 7.3:-78073759 MS.gene022141:CDS
TGTAGGAGATGTGGATACAT+CGG 0.609926 7.3:+78072206 None:intergenic
ATATGAGATTGAAATGGCAG+AGG 0.610938 7.3:-78074095 MS.gene022141:CDS
ACAACCACTATACCTAGTGT+TGG 0.612031 7.3:-78074469 MS.gene022141:CDS
TTCGTCTTGTCATCAATCAA+GGG 0.613908 7.3:-78071959 MS.gene022141:intron
CAACTTATGAGTGCACAAGT+AGG 0.615734 7.3:-78074043 MS.gene022141:CDS
CATGATATAGATGACTGTGC+AGG 0.616108 7.3:+78072459 None:intergenic
TGATCTGTGAACAAAGTTTG+GGG 0.616827 7.3:+78073608 None:intergenic
GAGTCAATTGAACATGAATG+AGG 0.618296 7.3:-78071667 None:intergenic
GAGGTATTTCTTGAAGCACA+TGG 0.618467 7.3:-78073641 MS.gene022141:CDS
AGAATCCTAGAGCTGAAACA+AGG 0.627112 7.3:-78074264 MS.gene022141:CDS
ACCGATTGAGACAACAACAA+AGG 0.632586 7.3:-78072070 MS.gene022141:CDS
GTGATGCCAGAGACTCGACA+TGG 0.639006 7.3:-78073554 MS.gene022141:CDS
CTTATGAGTGCACAAGTAGG+TGG 0.646963 7.3:-78074040 MS.gene022141:CDS
TGGACAAGAGATGCACGCAA+TGG 0.649539 7.3:-78072330 MS.gene022141:CDS
AAGGGGTATAAGAATCGGCG+TGG 0.650761 7.3:-78072051 MS.gene022141:CDS
AAGCCTGAAAACAATGCCAA+CGG 0.656439 7.3:+78073743 None:intergenic
TCAATCGGTTCAGCCAATGT+CGG 0.659221 7.3:+78072084 None:intergenic
CGTCTTTCAGACATCAGGTG+TGG 0.666655 7.3:-78071832 MS.gene022141:CDS
AGGGGTATAAGAATCGGCGT+GGG 0.674899 7.3:-78072050 MS.gene022141:CDS
TAGACTAGAACAAAATGCAA+CGG 0.678964 7.3:-78072127 MS.gene022141:CDS
CTTGATTGATGACAAGACGA+AGG 0.695787 7.3:+78071961 None:intergenic
GAACTAATCTTGGATATACA+CGG 0.698243 7.3:-78074015 MS.gene022141:CDS
TTTGTTCACAGATCAAGACC+AGG 0.702976 7.3:-78073600 MS.gene022141:CDS
TGATGCCAGAGACTCGACAT+GGG 0.714570 7.3:-78073553 MS.gene022141:CDS
CGATTGAGACAACAACAAAG+GGG 0.733862 7.3:-78072068 MS.gene022141:CDS
TCTGTGGAAGCTGTAAATCG+TGG 0.747227 7.3:+78074164 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATTTTTAAAATCATTGA+AGG - chr7.3:78074321-78074340 MS.gene022141:CDS 10.0%
!! AAAATAAGGAAAATTCATTA+TGG + chr7.3:78073603-78073622 None:intergenic 15.0%
!! ATTATGGAATTTGTCAAAAA+TGG + chr7.3:78073587-78073606 None:intergenic 20.0%
!! TAATGTCAATGAAAACAATT+GGG - chr7.3:78072820-78072839 MS.gene022141:intron 20.0%
!! TAGTTTCACTAGATTATTAA+TGG - chr7.3:78074423-78074442 MS.gene022141:CDS 20.0%
!! TTAATGTCAATGAAAACAAT+TGG - chr7.3:78072819-78072838 MS.gene022141:intron 20.0%
!!! AACAAATCACAAATGTATTT+TGG - chr7.3:78072342-78072361 MS.gene022141:CDS 20.0%
!!! ACAAATCACAAATGTATTTT+GGG - chr7.3:78072343-78072362 MS.gene022141:CDS 20.0%
!!! ATCTTAGATTATGGATATTT+TGG - chr7.3:78072380-78072399 MS.gene022141:CDS 20.0%
!!! TGTGTATATGTTTTTAATGT+AGG - chr7.3:78074506-78074525 MS.gene022141:CDS 20.0%
!!! TTTTTAAAATCATTGAAGGT+TGG - chr7.3:78074325-78074344 MS.gene022141:CDS 20.0%
!!! TTTTTGTGTTGAAAATAGAT+AGG - chr7.3:78071688-78071707 MS.gene022141:intron 20.0%
! AAATCAGTAACATTGATGTT+TGG + chr7.3:78073424-78073443 None:intergenic 25.0%
! ATCTTTCAAATGGTTATTTG+AGG - chr7.3:78072535-78072554 MS.gene022141:CDS 25.0%
! CGTTGTGTTATAGATAATTT+GGG + chr7.3:78073931-78073950 None:intergenic 25.0%
! GCAAAAATGATCTTAGATTA+TGG - chr7.3:78072371-78072390 MS.gene022141:CDS 25.0%
! GTATGCTATTAAGGAAAAAT+GGG - chr7.3:78072853-78072872 MS.gene022141:intron 25.0%
! TACACAGTATCATAAAAAGT+TGG + chr7.3:78074492-78074511 None:intergenic 25.0%
! TATCTATAACACAACGATAT+AGG - chr7.3:78073935-78073954 MS.gene022141:CDS 25.0%
! TCGTTGTGTTATAGATAATT+TGG + chr7.3:78073932-78073951 None:intergenic 25.0%
! TGGTATTATATATGATGCAA+AGG - chr7.3:78073885-78073904 MS.gene022141:CDS 25.0%
! TGTATGCTATTAAGGAAAAA+TGG - chr7.3:78072852-78072871 MS.gene022141:intron 25.0%
! TTATTAATGGTAAGATTCCT+TGG - chr7.3:78074436-78074455 MS.gene022141:CDS 25.0%
!! CTTGAACTTCAGATATTTTA+CGG + chr7.3:78072079-78072098 None:intergenic 25.0%
!! GAGTTTGAATTCTGATTTTA+AGG - chr7.3:78072934-78072953 MS.gene022141:intron 25.0%
!!! TCTTTAAGATGTATTGTTCA+GGG + chr7.3:78073843-78073862 None:intergenic 25.0%
AAACTGCTGAATCTTTCAAA+TGG - chr7.3:78072525-78072544 MS.gene022141:CDS 30.0%
AACAATACATCTTAAAGAGG+TGG - chr7.3:78073845-78073864 MS.gene022141:CDS 30.0%
AAGGTGATGACATATTCAAA+TGG + chr7.3:78073664-78073683 None:intergenic 30.0%
ACTAAATAAGATCTCTTGTC+CGG + chr7.3:78071909-78071928 None:intergenic 30.0%
ATATGATGCAAAGGAAAATG+AGG - chr7.3:78073894-78073913 MS.gene022141:CDS 30.0%
ATTGCACTTAGTTCAAAGAA+TGG - chr7.3:78071972-78071991 MS.gene022141:CDS 30.0%
ATTTGAATATGTCATCACCT+TGG - chr7.3:78073663-78073682 MS.gene022141:CDS 30.0%
CATGTATGATTATGATCAAG+AGG - chr7.3:78072757-78072776 MS.gene022141:intron 30.0%
CCTTGGTCTATAAAAAGTAA+TGG - chr7.3:78074453-78074472 MS.gene022141:CDS 30.0%
CTGAACAATACATCTTAAAG+AGG - chr7.3:78073842-78073861 MS.gene022141:CDS 30.0%
GAAAAAAGGAAGTCATTTCT+TGG - chr7.3:78072718-78072737 MS.gene022141:intron 30.0%
GAACTAATCTTGGATATACA+CGG - chr7.3:78072180-78072199 MS.gene022141:CDS 30.0%
GAATGGCTGTATATCAAATT+TGG + chr7.3:78073526-78073545 None:intergenic 30.0%
GACATATTCAAATGGAAGTT+GGG + chr7.3:78073656-78073675 None:intergenic 30.0%
TAGACTAGAACAAAATGCAA+CGG - chr7.3:78074068-78074087 MS.gene022141:CDS 30.0%
TCAAGCATATGAGATTGAAA+TGG - chr7.3:78072094-78072113 MS.gene022141:CDS 30.0%
TCTGCAAGTTCATATAATGT+AGG + chr7.3:78074009-78074028 None:intergenic 30.0%
TGACATATTCAAATGGAAGT+TGG + chr7.3:78073657-78073676 None:intergenic 30.0%
TGATGTGCATGAAAAAATGA+AGG + chr7.3:78072308-78072327 None:intergenic 30.0%
TTCATATAATGTAGGAGATG+TGG + chr7.3:78074001-78074020 None:intergenic 30.0%
TTGATCTGTGAACAAAGTTT+GGG + chr7.3:78072591-78072610 None:intergenic 30.0%
TTGCTCAACAATGATTAGAT+TGG - chr7.3:78073963-78073982 MS.gene022141:CDS 30.0%
! AAGAAGATGCATCTTCTTTT+CGG - chr7.3:78073147-78073166 MS.gene022141:intron 30.0%
! AAGAAGATGCATCTTCTTTT+CGG + chr7.3:78073166-78073147 None:intergenic 30.0%
! CTTGGTAACTTGATGAAAAA+AGG - chr7.3:78072704-78072723 MS.gene022141:intron 30.0%
! TGACTTGTGTAAAAAAGTGA+TGG - chr7.3:78074041-78074060 MS.gene022141:CDS 30.0%
!! CTCTTTAAGATGTATTGTTC+AGG + chr7.3:78073844-78073863 None:intergenic 30.0%
!! TGTAGAAAGTTTGAGACTTT+TGG - chr7.3:78073763-78073782 MS.gene022141:CDS 30.0%
!!! AGATTATGGATATTTTGGTG+AGG - chr7.3:78072385-78072404 MS.gene022141:CDS 30.0%
!!! ATTTTTTCATGCACATCAGA+TGG - chr7.3:78072310-78072329 MS.gene022141:CDS 30.0%
!!! CCATTACTTTTTATAGACCA+AGG + chr7.3:78074456-78074475 None:intergenic 30.0%
!!! CTTTTTTCATCAAGTTACCA+AGG + chr7.3:78072706-78072725 None:intergenic 30.0%
AAATGACATCGCCTCTATAA+TGG + chr7.3:78072481-78072500 None:intergenic 35.0%
AACAAACCTGCATGATCTAA+TGG + chr7.3:78071862-78071881 None:intergenic 35.0%
ACAACGTAACATGGTTTATG+GGG - chr7.3:78072235-78072254 MS.gene022141:CDS 35.0%
AGACAACGTAACATGGTTTA+TGG - chr7.3:78072233-78072252 MS.gene022141:CDS 35.0%
ATATGAGATTGAAATGGCAG+AGG - chr7.3:78072100-78072119 MS.gene022141:CDS 35.0%
CAATAAGGAAGGAGAGTTTA+AGG - chr7.3:78073687-78073706 MS.gene022141:CDS 35.0%
CAGAATGGTATAAAACACCT+TGG - chr7.3:78072686-78072705 MS.gene022141:intron 35.0%
CTTGATCTGTGAACAAAGTT+TGG + chr7.3:78072592-78072611 None:intergenic 35.0%
CTTGTGTAAAAAAGTGATGG+AGG - chr7.3:78074044-78074063 MS.gene022141:CDS 35.0%
GAAGTCGATGTATGCTATTA+AGG - chr7.3:78072844-78072863 MS.gene022141:intron 35.0%
GACAAAAGCGATTCAAAAGT+TGG - chr7.3:78074175-78074194 MS.gene022141:CDS 35.0%
GACAACGTAACATGGTTTAT+GGG - chr7.3:78072234-78072253 MS.gene022141:CDS 35.0%
GCAATCCTAAAAAGCAGTTT+GGG - chr7.3:78073317-78073336 MS.gene022141:CDS 35.0%
GTTGAGTATGGTAAAGAAAC+TGG - chr7.3:78071789-78071808 MS.gene022141:CDS 35.0%
GTTGCACTAAAATTGGTGAA+TGG + chr7.3:78073543-78073562 None:intergenic 35.0%
TAATCTTGGATATACACGGT+TGG - chr7.3:78072184-78072203 MS.gene022141:CDS 35.0%
TATGCGAGCAGCTAAAAATA+AGG + chr7.3:78073617-78073636 None:intergenic 35.0%
TGATCTGTGAACAAAGTTTG+GGG + chr7.3:78072590-78072609 None:intergenic 35.0%
TGGAATTTGTCAAAAATGGC+AGG + chr7.3:78073583-78073602 None:intergenic 35.0%
TGTAATCCATGAGTTTGTGA+AGG - chr7.3:78072001-78072020 MS.gene022141:CDS 35.0%
TTCGTCTTGTCATCAATCAA+GGG - chr7.3:78074236-78074255 MS.gene022141:CDS 35.0%
! AGAAGATGCATCTTCTTTTC+GGG + chr7.3:78073167-78073148 None:intergenic 35.0%
! CAACAAAGGGGTATAAGAAT+CGG - chr7.3:78074139-78074158 MS.gene022141:CDS 35.0%
! TATGGTAAAGAAACTGGCTT+TGG - chr7.3:78071795-78071814 MS.gene022141:CDS 35.0%
! TCAGGCTTTAACCATTATAG+AGG - chr7.3:78072467-78072486 MS.gene022141:CDS 35.0%
!! AAAAGACTAGTGTTGGTTTG+TGG + chr7.3:78073007-78073026 None:intergenic 35.0%
!! AAAGACTAGTGTTGGTTTGT+GGG + chr7.3:78073006-78073025 None:intergenic 35.0%
!! CGAGTTAGTTTGTGAATATG+AGG - chr7.3:78073486-78073505 MS.gene022141:CDS 35.0%
!! TTGATAGTGTAGATGAAGCT+TGG - chr7.3:78071757-78071776 MS.gene022141:intron 35.0%
!!! AACATCCCAAACTGCTTTTT+AGG + chr7.3:78073325-78073344 None:intergenic 35.0%
!!! ATAGAGGCGATGTCATTTTT+GGG - chr7.3:78072483-78072502 MS.gene022141:CDS 35.0%
!!! TATAGAGGCGATGTCATTTT+TGG - chr7.3:78072482-78072501 MS.gene022141:CDS 35.0%
!!! TTATGGATATTTTGGTGAGG+TGG - chr7.3:78072388-78072407 MS.gene022141:CDS 35.0%
AACATGGTTTATGGGGAAGT+TGG - chr7.3:78072242-78072261 MS.gene022141:CDS 40.0%
AAGCCTGAAAACAATGCCAA+CGG + chr7.3:78072455-78072474 None:intergenic 40.0%
AAGGAAGGAGAGTTTAAGGA+AGG - chr7.3:78073691-78073710 MS.gene022141:CDS 40.0%
ACAACCACTATACCTAGTGT+TGG - chr7.3:78071726-78071745 MS.gene022141:intron 40.0%
ACAACTCCATTAGATCATGC+AGG - chr7.3:78071853-78071872 MS.gene022141:CDS 40.0%
ACATGGCACTTGATTCAGAA+TGG - chr7.3:78072671-78072690 MS.gene022141:intron 40.0%
ACCGATTGAGACAACAACAA+AGG - chr7.3:78074125-78074144 MS.gene022141:CDS 40.0%
AGAATCCTAGAGCTGAAACA+AGG - chr7.3:78071931-78071950 MS.gene022141:intron 40.0%
AGAATGGAAATGGGATGTTC+GGG + chr7.3:78073375-78073394 None:intergenic 40.0%
AGCAAGAAGACAACGTAACA+TGG - chr7.3:78072226-78072245 MS.gene022141:CDS 40.0%
ATCACCTTGGTCAATAAGGA+AGG - chr7.3:78073676-78073695 MS.gene022141:CDS 40.0%
CAACGGTCTATTAGCATGAT+TGG + chr7.3:78072438-78072457 None:intergenic 40.0%
CAACTTATGAGTGCACAAGT+AGG - chr7.3:78072152-78072171 MS.gene022141:CDS 40.0%
CAAGACGAAGGTTGTACAAT+CGG + chr7.3:78074225-78074244 None:intergenic 40.0%
CAATCATGCTAATAGACCGT+TGG - chr7.3:78072436-78072455 MS.gene022141:CDS 40.0%
CAGAATGGAAATGGGATGTT+CGG + chr7.3:78073376-78073395 None:intergenic 40.0%
CATGATATAGATGACTGTGC+AGG + chr7.3:78073739-78073758 None:intergenic 40.0%
CCCATTTCCAGAATGGAAAT+GGG + chr7.3:78073384-78073403 None:intergenic 40.0%
CCGATTGAGACAACAACAAA+GGG - chr7.3:78074126-78074145 MS.gene022141:CDS 40.0%
CGATTGAGACAACAACAAAG+GGG - chr7.3:78074127-78074146 MS.gene022141:CDS 40.0%
CTTCGTCTTGTCATCAATCA+AGG - chr7.3:78074235-78074254 MS.gene022141:CDS 40.0%
GAAGCTGTAAATCGTGGTTA+TGG + chr7.3:78072028-78072047 None:intergenic 40.0%
GCTTAACTGTGGAGTTTCTA+TGG + chr7.3:78073182-78073201 None:intergenic 40.0%
GGCAATCCTAAAAAGCAGTT+TGG - chr7.3:78073316-78073335 MS.gene022141:CDS 40.0%
GTAACATCCCATTTCCAGAA+TGG + chr7.3:78073391-78073410 None:intergenic 40.0%
GTAGGTGGTAGAACTAATCT+TGG - chr7.3:78072170-78072189 MS.gene022141:CDS 40.0%
TATGGTCCTTCACAAACTCA+TGG + chr7.3:78072010-78072029 None:intergenic 40.0%
TCCCATTTCCAGAATGGAAA+TGG + chr7.3:78073385-78073404 None:intergenic 40.0%
TCTTGGAGTAGTACTAGGAT+GGG - chr7.3:78073209-78073228 MS.gene022141:intron 40.0%
TGCAAAGGAAAATGAGGTTG+TGG - chr7.3:78073900-78073919 MS.gene022141:CDS 40.0%
TGTAGGAGATGTGGATACAT+CGG + chr7.3:78073992-78074011 None:intergenic 40.0%
TGTCATCACCTTGGTCAATA+AGG - chr7.3:78073672-78073691 MS.gene022141:CDS 40.0%
TTTGTTCACAGATCAAGACC+AGG - chr7.3:78072595-78072614 MS.gene022141:intron 40.0%
! AGATGAAGCTTGGCAGTTTT+GGG - chr7.3:78071767-78071786 MS.gene022141:intron 40.0%
! AGGTTTGTTTGTTGCAAGGA+GGG - chr7.3:78071873-78071892 MS.gene022141:intron 40.0%
! ATGCAGGTTTGTTTGTTGCA+AGG - chr7.3:78071869-78071888 MS.gene022141:intron 40.0%
! CAAACACTTTGAGAGAGTTG+TGG - chr7.3:78073447-78073466 MS.gene022141:CDS 40.0%
! CCCATTTCCATTCTGGAAAT+GGG - chr7.3:78073381-78073400 MS.gene022141:CDS 40.0%
! CTTGATTGATGACAAGACGA+AGG + chr7.3:78074237-78074256 None:intergenic 40.0%
! GAGGTATTTCTTGAAGCACA+TGG - chr7.3:78072554-78072573 MS.gene022141:CDS 40.0%
! GTTTGAGATAACTCATGTGC+TGG + chr7.3:78074394-78074413 None:intergenic 40.0%
! TAGATGAAGCTTGGCAGTTT+TGG - chr7.3:78071766-78071785 MS.gene022141:intron 40.0%
! TCCCATTTCCATTCTGGAAA+TGG - chr7.3:78073380-78073399 MS.gene022141:CDS 40.0%
! TGTACAATCGGAGCTCTTTT+AGG + chr7.3:78074213-78074232 None:intergenic 40.0%
!! AAAAGACTCGTGTTGGTTTG+TGG - chr7.3:78073285-78073304 MS.gene022141:intron 40.0%
!! AAAGACTCGTGTTGGTTTGT+GGG - chr7.3:78073286-78073305 MS.gene022141:intron 40.0%
!! AACTGGCTTTGGTGTTAGAA+AGG - chr7.3:78071806-78071825 MS.gene022141:CDS 40.0%
!! AAGACTAGTGTTGGTTTGTG+GGG + chr7.3:78073005-78073024 None:intergenic 40.0%
!! ATGAAGGAAGCATTCACTCT+AGG - chr7.3:78072887-78072906 MS.gene022141:intron 40.0%
!! CCCTTTGTTGTTGTCTCAAT+CGG + chr7.3:78074129-78074148 None:intergenic 40.0%
!! TAACATCCCAGACTGCTTTT+AGG - chr7.3:78072966-78072985 MS.gene022141:intron 40.0%
!!! TAGAGGCGATGTCATTTTTG+GGG - chr7.3:78072484-78072503 MS.gene022141:CDS 40.0%
AAGACAAGCACGCTTAACTG+TGG + chr7.3:78073193-78073212 None:intergenic 45.0%
ACAGTTAAGCGTGCTTGTCT+TGG - chr7.3:78073192-78073211 MS.gene022141:intron 45.0%
AGGCAATCCTAAAAGCAGTC+TGG + chr7.3:78072976-78072995 None:intergenic 45.0%
ATTGAAATGGCAGAGGACTC+TGG - chr7.3:78072107-78072126 MS.gene022141:CDS 45.0%
CACGCTGAAAAGACTAGTGT+TGG + chr7.3:78073014-78073033 None:intergenic 45.0%
CAGATCGTCTTTCAGACATC+AGG - chr7.3:78074358-78074377 MS.gene022141:CDS 45.0%
CATGCCAACACTAGGTATAG+TGG + chr7.3:78071733-78071752 None:intergenic 45.0%
CATGCTGAAAAGACTCGTGT+TGG - chr7.3:78073278-78073297 MS.gene022141:intron 45.0%
CCATGCACTCAAGATCTTTG+AGG - chr7.3:78073798-78073817 MS.gene022141:CDS 45.0%
CCTCAAAGATCTTGAGTGCA+TGG + chr7.3:78073801-78073820 None:intergenic 45.0%
CGAACATCCCATTTCCATTC+TGG - chr7.3:78073374-78073393 MS.gene022141:CDS 45.0%
CTCTCCTTCCTTATTGACCA+AGG + chr7.3:78073683-78073702 None:intergenic 45.0%
CTTATGAGTGCACAAGTAGG+TGG - chr7.3:78072155-78072174 MS.gene022141:CDS 45.0%
GAATGGAAATGGGATGTTCG+GGG + chr7.3:78073374-78073393 None:intergenic 45.0%
GAGAGTTTAAGGAAGGAGAG+TGG - chr7.3:78073698-78073717 MS.gene022141:CDS 45.0%
GCAACGGTCAATGATGAAGT+TGG - chr7.3:78074084-78074103 MS.gene022141:CDS 45.0%
GCTTAACTGTGGAGTTCCTA+TGG - chr7.3:78073110-78073129 MS.gene022141:intron 45.0%
GCTTGGAGTAGTACTAGGAT+GGG + chr7.3:78073083-78073102 None:intergenic 45.0%
GCTTGTCTTGGAGTAGTACT+AGG - chr7.3:78073204-78073223 MS.gene022141:intron 45.0%
GGCAATCCTAAAAGCAGTCT+GGG + chr7.3:78072975-78072994 None:intergenic 45.0%
GTCTTGGAGTAGTACTAGGA+TGG - chr7.3:78073208-78073227 MS.gene022141:intron 45.0%
TCAAACTCCATGCCAACACT+AGG + chr7.3:78071741-78071760 None:intergenic 45.0%
TCTGTGGAAGCTGTAAATCG+TGG + chr7.3:78072034-78072053 None:intergenic 45.0%
TGCGCGAGTTGCACTAAAAT+TGG + chr7.3:78073550-78073569 None:intergenic 45.0%
TTACACTTGGTATCAGAGCC+TGG - chr7.3:78073343-78073362 MS.gene022141:CDS 45.0%
TTTGTTGCAAGGAGGGTCAT+CGG - chr7.3:78071880-78071899 MS.gene022141:intron 45.0%
! ACACTTTGAGAGAGTTGTGG+AGG - chr7.3:78073450-78073469 MS.gene022141:CDS 45.0%
! AGACCGTTGGCATTGTTTTC+AGG - chr7.3:78072449-78072468 MS.gene022141:CDS 45.0%
! AGGAGAAGTTTGAGACAGCT+TGG - chr7.3:78072777-78072796 MS.gene022141:intron 45.0%
! CAGGTTTGTTTGTTGCAAGG+AGG - chr7.3:78071872-78071891 MS.gene022141:intron 45.0%
! CTAGTGCTTTAGACATTGCC+TGG + chr7.3:78072616-78072635 None:intergenic 45.0%
! CTCGACATGGGTTATGTACA+TGG - chr7.3:78072654-78072673 MS.gene022141:intron 45.0%
! GCAGTTTGGGATGTTACACT+TGG - chr7.3:78073330-78073349 MS.gene022141:CDS 45.0%
! TCAATCGGTTCAGCCAATGT+CGG + chr7.3:78074114-78074133 None:intergenic 45.0%
! TCAGTCCTTGTTTCAGCTCT+AGG + chr7.3:78071939-78071958 None:intergenic 45.0%
!! AAGACTCGTGTTGGTTTGTG+GGG - chr7.3:78073287-78073306 MS.gene022141:intron 45.0%
!! CACTATACCTAGTGTTGGCA+TGG - chr7.3:78071731-78071750 MS.gene022141:intron 45.0%
!! TGAAGTTGGTGTTCCGACAT+TGG - chr7.3:78074098-78074117 MS.gene022141:CDS 45.0%
!! TGTTGGTTTGTGGGGTTAGT+CGG - chr7.3:78073295-78073314 MS.gene022141:CDS 45.0%
!! TTTTCGGGAGCTCAATCCAT+AGG + chr7.3:78073129-78073148 None:intergenic 45.0%
!!! TGGCAGTTTTGGGTTGAGTA+TGG - chr7.3:78071777-78071796 MS.gene022141:CDS 45.0%
AAGCCAAGCACGCTTAACTG+TGG - chr7.3:78073099-78073118 MS.gene022141:intron 50.0%
ACAGTTAAGCGTGCTTGGCT+TGG + chr7.3:78073100-78073119 None:intergenic 50.0%
ACGCTTACCAGGAAACTTCC+CGG - chr7.3:78073050-78073069 MS.gene022141:intron 50.0%
ACTCCACAGTTAAGCGTGCT+TGG + chr7.3:78073206-78073187 None:intergenic 50.0%
ATGCTTACCGGGAAACTTCC+CGG + chr7.3:78073242-78073261 None:intergenic 50.0%
ATGGGCAGCATGTCACATGA+AGG - chr7.3:78072871-78072890 MS.gene022141:intron 50.0%
CATAACCCATGTCGAGTCTC+TGG + chr7.3:78072650-78072669 None:intergenic 50.0%
CGTCTTTCAGACATCAGGTG+TGG - chr7.3:78074363-78074382 MS.gene022141:CDS 50.0%
GGCTTGGAGTAGTACTAGGA+TGG + chr7.3:78073084-78073103 None:intergenic 50.0%
GTCCTCACTCACATGCTTAC+CGG + chr7.3:78073254-78073273 None:intergenic 50.0%
TACTAGGATGGGTGACCTAC+CGG - chr7.3:78073220-78073239 MS.gene022141:intron 50.0%
TACTAGGATGGGTGACCTAC+CGG + chr7.3:78073239-78073220 None:intergenic 50.0%
TCCTCACTCACATGCTTACC+GGG + chr7.3:78073253-78073272 None:intergenic 50.0%
TGAGACAGCTTGGAGCAAGT+TGG - chr7.3:78072787-78072806 MS.gene022141:intron 50.0%
TGATGCCAGAGACTCGACAT+GGG - chr7.3:78072642-78072661 MS.gene022141:intron 50.0%
TGGACAAGAGATGCACGCAA+TGG - chr7.3:78073865-78073884 MS.gene022141:CDS 50.0%
TTACCAGGAAACTTCCCGGT+AGG - chr7.3:78073054-78073073 MS.gene022141:intron 50.0%
! AAGGGGTATAAGAATCGGCG+TGG - chr7.3:78074144-78074163 MS.gene022141:CDS 50.0%
! AGGGGTATAAGAATCGGCGT+GGG - chr7.3:78074145-78074164 MS.gene022141:CDS 50.0%
! GCTAGCTTGTGTGTTGTCTG+TGG + chr7.3:78072050-78072069 None:intergenic 50.0%
! GGACTCTGGTTTGAGGCAAA+AGG - chr7.3:78072121-78072140 MS.gene022141:CDS 50.0%
!! GCTTGGCTTGGAGTAGTACT+AGG + chr7.3:78073088-78073107 None:intergenic 50.0%
!! GTTGGTTTGTGGGGTTAGTC+AGG + chr7.3:78073315-78073296 None:intergenic 50.0%
ACTAGGATGGGTGACCTACC+GGG - chr7.3:78073221-78073240 MS.gene022141:intron 55.0%
ACTAGGATGGGTGACCTACC+GGG + chr7.3:78073240-78073221 None:intergenic 55.0%
GTGATGCCAGAGACTCGACA+TGG - chr7.3:78072641-78072660 MS.gene022141:intron 55.0%
TCCCGGTAAGCATGTGAGTG+AGG - chr7.3:78073249-78073268 MS.gene022141:intron 55.0%
TGACCTACCGGGAAGTTTCC+CGG - chr7.3:78073232-78073251 MS.gene022141:intron 55.0%
TGACCTACCGGGAAGTTTCC+TGG + chr7.3:78073251-78073232 None:intergenic 55.0%
TTACCGGGAAACTTCCCGGT+AGG + chr7.3:78073238-78073257 None:intergenic 55.0%
! TGGCAGAGGACTCTGGTTTG+AGG - chr7.3:78072114-78072133 MS.gene022141:CDS 55.0%
CAAGGAGGGTCATCGGATGC+CGG - chr7.3:78071887-78071906 MS.gene022141:intron 60.0%
TCCTCACTCGCACGCTTACC+AGG - chr7.3:78073039-78073058 MS.gene022141:intron 60.0%
TCCTGGTAAGCGTGCGAGTG+AGG + chr7.3:78073043-78073062 None:intergenic 60.0%
GGGATGTTCGGGGACGAACC+AGG + chr7.3:78073364-78073383 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 78071669 78074548 78071669 ID=MS.gene022141
chr7.3 mRNA 78071669 78074548 78071669 ID=MS.gene022141.t1;Parent=MS.gene022141
chr7.3 exon 78073288 78074548 78073288 ID=MS.gene022141.t1.exon1;Parent=MS.gene022141.t1
chr7.3 CDS 78073288 78074548 78073288 ID=cds.MS.gene022141.t1;Parent=MS.gene022141.t1
chr7.3 exon 78071960 78072591 78071960 ID=MS.gene022141.t1.exon2;Parent=MS.gene022141.t1
chr7.3 CDS 78071960 78072591 78071960 ID=cds.MS.gene022141.t1;Parent=MS.gene022141.t1
chr7.3 exon 78071773 78071874 78071773 ID=MS.gene022141.t1.exon3;Parent=MS.gene022141.t1
chr7.3 CDS 78071773 78071874 78071773 ID=cds.MS.gene022141.t1;Parent=MS.gene022141.t1
chr7.3 exon 78071669 78071689 78071669 ID=MS.gene022141.t1.exon4;Parent=MS.gene022141.t1
chr7.3 CDS 78071669 78071689 78071669 ID=cds.MS.gene022141.t1;Parent=MS.gene022141.t1
Gene Sequence

>MS.gene022141

ATGTTGGTGAATTGCTCTGTTTTTGTGTTGAAAATAGATAGGTTTTTTCTAGCAATGACAACCACTATACCTAGTGTTGGCATGGAGTTTGATAGTGTAGATGAAGCTTGGCAGTTTTGGGTTGAGTATGGTAAAGAAACTGGCTTTGGTGTTAGAAAGGATTATTTCAACAAAAGAAAGAAAGACAACTCCATTAGATCATGCAGGTTTGTTTGTTGCAAGGAGGGTCATCGGATGCCGGACAAGAGATCTTATTTAGTTAAGAATCCTAGAGCTGAAACAAGGACTGATTGCAAAGCAAGAATTGCACTTAGTTCAAAGAATGGAAAGTTTGTAATCCATGAGTTTGTGAAGGACCATAACCACGATTTACAGCTTCCACAGACAACACACAAGCTAGCATCACACCGTAAAATATCTGAAGTTCAAGCATATGAGATTGAAATGGCAGAGGACTCTGGTTTGAGGCAAAAGGCTTCATTTCAACTTATGAGTGCACAAGTAGGTGGTAGAACTAATCTTGGATATACACGGTTGGATGCTAAGAACTATCTTAAAGCAAGAAGACAACGTAACATGGTTTATGGGGAAGTTGGTAGTCTTATGAAGTATTTTCAACATCAGTTATTGAAGAATCCTTCATTTTTTCATGCACATCAGATGGATTGCGATGAACAAATCACAAATGTATTTTGGGATGATGCAAAAATGATCTTAGATTATGGATATTTTGGTGAGGTGGTTTCTTTAGATACTACGTATTGCACCAATCATGCTAATAGACCGTTGGCATTGTTTTCAGGCTTTAACCATTATAGAGGCGATGTCATTTTTGGGGCTGCACTCTTATATGATGAAACTGCTGAATCTTTCAAATGGTTATTTGAGGTATTTCTTGAAGCACATGGAAATAAAAAACCCCAAACTTTGTTCACAGATCAAGACCAGGCAATGTCTAAAGCACTAGCTGAAGTGATGCCAGAGACTCGACATGGGTTATGTACATGGCACTTGATTCAGAATGGTATAAAACACCTTGGTAACTTGATGAAAAAAGGAAGTCATTTCTTGGCTGATTTTAAGAAGTGCATGTATGATTATGATCAAGAGGAGAAGTTTGAGACAGCTTGGAGCAAGTTGGTTTCAGAATTTAATGTCAATGAAAACAATTGGGTGAAGTCGATGTATGCTATTAAGGAAAAATGGGCAGCATGTCACATGAAGGAAGCATTCACTCTAGGAATGCGAAGCACTCAACTTAGTGAGAGTTTGAATTCTGATTTTAAGGCATGTATTGTAACATCCCAGACTGCTTTTAGGATTGCCTGACTAACCCCACAAACCAACACTAGTCTTTTCAGCGTGTTTTGTCCTCACTCGCACGCTTACCAGGAAACTTCCCGGTAGGTCACCCATCCTAGTACTACTCCAAGCCAAGCACGCTTAACTGTGGAGTTCCTATGGATTGAGCTCCCGAAAAGAAGATGCATCTTCTTTTCGGTAGCTCAATCCATAGAAACTCCACAGTTAAGCGTGCTTGTCTTGGAGTAGTACTAGGATGGGTGACCTACCGGGAAGTTTCCCGGTAAGCATGTGAGTGAGGACAAAGCATGCTGAAAAGACTCGTGTTGGTTTGTGGGGTTAGTCGGCAATCCTAAAAAGCAGTTTGGGATGTTACACTTGGTATCAGAGCCTGGTTCGTCCCCGAACATCCCATTTCCATTCTGGAAATGGGATGTTACATGTATGACACCAAACATCAATGTTACTGATTTTTTCAAACACTTTGAGAGAGTTGTGGAGGAAAAGCGAAACAACGAGTTAGTTTGTGAATATGAGGCTCGACATAAACTGCCAAATTTGATATACAGCCATTCACCAATTTTAGTGCAACTCGCGCAAATATACACACCTGCCATTTTTGACAAATTCCATAATGAATTTTCCTTATTTTTAGCTGCTCGCATAGAGAAAAAATATATGTCCCAACTTCCATTTGAATATGTCATCACCTTGGTCAATAAGGAAGGAGAGTTTAAGGAAGGAGAGTGGAGAGTTCTATTTGATCCTGCACAGTCATCTATATCATGTAGTTGTAGAAAGTTTGAGACTTTTGGAATACTTTGTTGCCATGCACTCAAGATCTTTGAGGCAAATGATGTTAAACTTGTCCCTGAACAATACATCTTAAAGAGGTGGACAAGAGATGCACGCAATGGTATTATATATGATGCAAAGGAAAATGAGGTTGTGGAAGATCCCAAATTATCTATAACACAACGATATAGGCGACTTTGCTCAACAATGATTAGATTGGCAGCCGATGTATCCACATCTCCTACATTATATGAACTTGCAGACAATGTAATACATGACTTGTGTAAAAAAGTGATGGAGGTTAGACTAGAACAAAATGCAACGGTCAATGATGAAGTTGGTGTTCCGACATTGGCTGAACCGATTGAGACAACAACAAAGGGGTATAAGAATCGGCGTGGGTCAAAGAGACAAAAGCGATTCAAAAGTTGGATTGAACGTCAGCCTAAAAGAGCTCCGATTGTACAACCTTCGTCTTGTCATCAATCAAGGGTATATAAGTTTATTGTTGTAACAATTTTTCTTTCAAAATAATTATTTTTCAATTATTGTGTATTAATTTTTAAAATCATTGAAGGTTGGATCTTCAAGTCAGATCGTCTTTCAGACATCAGGTGTGGCACATCCAGCACATGAGTTATCTCAAACAAATCAATTTAGTTTCACTAGATTATTAATGGTAAGATTCCTTGGTCTATAAAAAGTAATGGTTATGTTTTATTTCCAACTTTTTATGATACTGTGTATATGTTTTTAATGTAGGAGTCAATTGAACATGAATGA
Protein sequence

>MS.gene022141.t1

MLVNCSVFVLKIDRFFLAMTTTIPSVGMEFDSVDEAWQFWVEYGKETGFGVRKDYFNKRKKDNSIRSCRFVCCKEGHRMPDKRSYLVKNPRAETRTDCKARIALSSKNGKFVIHEFVKDHNHDLQLPQTTHKLASHRKISEVQAYEIEMAEDSGLRQKASFQLMSAQVGGRTNLGYTRLDAKNYLKARRQRNMVYGEVGSLMKYFQHQLLKNPSFFHAHQMDCDEQITNVFWDDAKMILDYGYFGEVVSLDTTYCTNHANRPLALFSGFNHYRGDVIFGAALLYDETAESFKWLFEVFLEAHGNKKPQTLFTDQDQAMSKALAEVMPETRHGLCTWHLIQNGIKHLGNLMKKGSHFLADFKKCMYDYDQEEKFETAWSKLVSEFNVNENNWVKSMYAIKEKWAACHMKEAFTLGMRSTQLTARIEKKYMSQLPFEYVITLVNKEGEFKEGEWRVLFDPAQSSISCSCRKFETFGILCCHALKIFEANDVKLVPEQYILKRWTRDARNGIIYDAKENEVVEDPKLSITQRYRRLCSTMIRLAADVSTSPTLYELADNVIHDLCKKVMEVRLEQNATVNDEVGVPTLAEPIETTTKGYKNRRGSKRQKRFKSWIERQPKRAPIVQPSSCHQSRVGSSSQIVFQTSGVAHPAHELSQTNQFSFTRLLMESIEHE