Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022173.t1 | AES76151.1 | 88.3 | 264 | 25 | 1 | 1 | 264 | 1 | 258 | 3.50E-122 | 448.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022173.t1 | Q568K5 | 34.6 | 231 | 125 | 4 | 23 | 251 | 10 | 216 | 6.0e-22 | 106.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022173.t1 | G7KHW9 | 88.3 | 264 | 25 | 1 | 1 | 264 | 1 | 258 | 2.5e-122 | 448.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene022173.t1 | TR | GNAT |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022173.t1 | MTR_6g072100 | 88.258 | 264 | 25 | 1 | 1 | 264 | 1 | 258 | 6.61e-173 | 483 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022173.t1 | AT1G18335 | 50.566 | 265 | 119 | 4 | 3 | 263 | 6 | 262 | 1.62e-77 | 240 |
| MS.gene022173.t1 | AT1G18335 | 50.758 | 264 | 118 | 4 | 3 | 262 | 6 | 261 | 5.72e-77 | 239 |
| MS.gene022173.t1 | AT1G18335 | 50.758 | 264 | 118 | 4 | 3 | 262 | 6 | 261 | 5.72e-77 | 239 |
Find 99 sgRNAs with CRISPR-Local
Find 330 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTCATAGGACACGGCTTC+TGG | 0.284691 | 6.3:-68397574 | MS.gene022173:intron |
| CTCTCATAGGACACGGCTTC+TGG | 0.284691 | 6.3:-68398112 | MS.gene022173:intron |
| CTCTGAATATATTGCGTAAC+AGG | 0.291924 | 6.3:+68401491 | None:intergenic |
| TTAGCTTAAGAGCTCTATTC+AGG | 0.293764 | 6.3:+68397206 | None:intergenic |
| CTCTCGTAGGACATGGCTTC+TGG | 0.304045 | 6.3:-68397750 | MS.gene022173:intron |
| CAGCCTCATGCTCAGTTGAT+TGG | 0.328993 | 6.3:+68398062 | None:intergenic |
| TCATGCTCAGTTGATTGGTT+GGG | 0.334696 | 6.3:+68398067 | None:intergenic |
| GATTTCGAAGCGGCGATAAT+CGG | 0.344464 | 6.3:+68402683 | None:intergenic |
| ACCATTGGATCAACTTTAGA+AGG | 0.362053 | 6.3:+68399316 | None:intergenic |
| CTCGTCCTCGGTTGGTTGGA+TGG | 0.363059 | 6.3:+68397704 | None:intergenic |
| TGTACATTACCGCTTTGTTT+TGG | 0.388601 | 6.3:-68400528 | MS.gene022173:CDS |
| TCGTCGTCAGTTGGTTCGTC+GGG | 0.389680 | 6.3:+68397529 | None:intergenic |
| CTCATGCTCAGTTGATTGGT+TGG | 0.408139 | 6.3:+68398066 | None:intergenic |
| CTCGGTTGGTTGGATGGGTT+CGG | 0.413998 | 6.3:+68397710 | None:intergenic |
| ATTTCGAAGCGGCGATAATC+GGG | 0.416262 | 6.3:+68402684 | None:intergenic |
| CTCTCATAGGACATGACTTC+GGG | 0.417664 | 6.3:-68397930 | MS.gene022173:intron |
| CTCGTCCTCAGTTGGTTGGA+TGG | 0.420386 | 6.3:+68397884 | None:intergenic |
| TTAGCCAATAGGATGTATTT+CGG | 0.421672 | 6.3:-68397233 | MS.gene022173:CDS |
| TCGTCCTCAGTTGGTTGGAT+GGG | 0.424743 | 6.3:+68397885 | None:intergenic |
| CGTGTCCAGGGGAAAGGATT+GGG | 0.426522 | 6.3:-68400458 | MS.gene022173:CDS |
| ATATATTCAGAGACTTCTTA+AGG | 0.426624 | 6.3:-68401480 | MS.gene022173:intron |
| ACAGCTCGAGCCTCGTGTCC+AGG | 0.444598 | 6.3:-68400471 | MS.gene022173:CDS |
| TCGTCCTCGGTTGGTTGGAT+GGG | 0.450341 | 6.3:+68397705 | None:intergenic |
| ACAAATATATAGCGTGCTTC+AGG | 0.453405 | 6.3:+68400653 | None:intergenic |
| CAGCCTCGTCCTCGGTTGGT+TGG | 0.458465 | 6.3:+68397700 | None:intergenic |
| AATTCCGAAATACATCCTAT+TGG | 0.458467 | 6.3:+68397229 | None:intergenic |
| TCTTCTTGACGACTAGTTGA+AGG | 0.460099 | 6.3:+68400572 | None:intergenic |
| AAAGGTGAAGCGTAGAGAAA+TGG | 0.460189 | 6.3:-68400681 | MS.gene022173:CDS |
| CTCAGTTGATTGGTTGGGGT+CGG | 0.462972 | 6.3:+68398072 | None:intergenic |
| GTTGATTGGTTGGGGTCGGC+AGG | 0.463023 | 6.3:+68398076 | None:intergenic |
| CAGCCTCGTCCTCAGTTGGT+TGG | 0.465098 | 6.3:+68397880 | None:intergenic |
| GTTGGTTGGATGGGGTCGGC+AGG | 0.465781 | 6.3:+68397894 | None:intergenic |
| CTTAACATGGAAGGGCCATA+TGG | 0.467460 | 6.3:-68400725 | MS.gene022173:CDS |
| GCTTTCCCAATCCTTTCCCC+TGG | 0.468580 | 6.3:+68400453 | None:intergenic |
| AGGATTGGGAAAGCTTCTAA+TGG | 0.474839 | 6.3:-68400444 | MS.gene022173:CDS |
| CTGTCGTGCTAACTGTTCAA+AGG | 0.475803 | 6.3:-68400134 | MS.gene022173:CDS |
| GTTGGTTCGTCGGGGTCACC+TGG | 0.481274 | 6.3:+68397538 | None:intergenic |
| CTCGTCGTCAGTTGGTTCGT+CGG | 0.482006 | 6.3:+68397528 | None:intergenic |
| CTCAGTTGGTTGGATGGGGT+CGG | 0.486235 | 6.3:+68397890 | None:intergenic |
| GGAGTTGTTGTGTGTTGCAT+TGG | 0.486598 | 6.3:+68402898 | None:intergenic |
| CAGCTCGAGCCTCGTGTCCA+GGG | 0.491833 | 6.3:-68400470 | MS.gene022173:CDS |
| GAAGATAGTGGTCCCTTGGT+TGG | 0.492453 | 6.3:-68400554 | MS.gene022173:CDS |
| CATGCTCAGTTGATTGGTTG+GGG | 0.499435 | 6.3:+68398068 | None:intergenic |
| TATTGAGCTTATCGCCCAAA+AGG | 0.500241 | 6.3:-68400417 | MS.gene022173:intron |
| GTTGGTTGGATGGGTTCGGC+AGG | 0.501696 | 6.3:+68397714 | None:intergenic |
| CAATGCTAACCTTTCGGCAT+CGG | 0.501747 | 6.3:+68397375 | None:intergenic |
| ACATGAGGAAGTTAGCCAAT+AGG | 0.503838 | 6.3:-68397244 | MS.gene022173:CDS |
| CGTCCTCAGTTGGTTGGATG+GGG | 0.507573 | 6.3:+68397886 | None:intergenic |
| AGGAATTTCAGCCTCGTCCT+CGG | 0.509764 | 6.3:+68397692 | None:intergenic |
| TCTTGCCACTCAGATCCATA+TGG | 0.513626 | 6.3:+68400710 | None:intergenic |
| CTCTCCGTGTGTTTAAAGTC+AGG | 0.520731 | 6.3:-68401536 | MS.gene022173:CDS |
| TCGTGTCCAGGGGAAAGGAT+TGG | 0.525244 | 6.3:-68400459 | MS.gene022173:CDS |
| TGAGTGGCAAGAGGAAGAAA+AGG | 0.525897 | 6.3:-68400699 | MS.gene022173:CDS |
| ATCTACAGCTTAACATGGAA+GGG | 0.529467 | 6.3:-68400733 | MS.gene022173:intron |
| ATTTCAGCCTCGTCCTCGGT+TGG | 0.531048 | 6.3:+68397696 | None:intergenic |
| GAGCCTCGTGTCCAGGGGAA+AGG | 0.535185 | 6.3:-68400464 | MS.gene022173:CDS |
| CATTGGTTCCACGGTGACGT+TGG | 0.535191 | 6.3:+68402915 | None:intergenic |
| AATCTACAGCTTAACATGGA+AGG | 0.544882 | 6.3:-68400734 | MS.gene022173:intron |
| TGTGTGTTGCATTGGTTCCA+CGG | 0.547362 | 6.3:+68402906 | None:intergenic |
| ATTTCAGCCTCGTCGTCAGT+TGG | 0.553072 | 6.3:+68397520 | None:intergenic |
| ACCTTCTAAAGTTGATCCAA+TGG | 0.555355 | 6.3:-68399317 | MS.gene022173:intron |
| TCAAGAAGATAGTGGTCCCT+TGG | 0.557490 | 6.3:-68400558 | MS.gene022173:CDS |
| CATCCAACCAACCGAGGACG+AGG | 0.558069 | 6.3:-68397703 | MS.gene022173:CDS |
| ACGTTGATGCCGATGCCGAA+AGG | 0.559474 | 6.3:-68397384 | MS.gene022173:intron |
| ATTTCAGCCTCGTCCTCAGT+TGG | 0.560819 | 6.3:+68397876 | None:intergenic |
| CCTCTCATAGGACATGACTT+CGG | 0.565717 | 6.3:-68397931 | MS.gene022173:intron |
| CATCCAACCAACTGAGGACG+AGG | 0.575763 | 6.3:-68397883 | MS.gene022173:CDS |
| AGTTCATACACATAAAGTAC+TGG | 0.583472 | 6.3:+68400494 | None:intergenic |
| TGTCGTGCTAACTGTTCAAA+GGG | 0.585683 | 6.3:-68400133 | MS.gene022173:CDS |
| ACTAGTCGTCAAGAAGATAG+TGG | 0.589965 | 6.3:-68400566 | MS.gene022173:CDS |
| CAACCAATCAACTGAGCATG+AGG | 0.596952 | 6.3:-68398065 | MS.gene022173:CDS |
| AATCCTTTCCCCTGGACACG+AGG | 0.597062 | 6.3:+68400461 | None:intergenic |
| ACACTCAGCAGCAATGAACT+CGG | 0.610335 | 6.3:-68402945 | None:intergenic |
| CGACCCCATCCAACCAACTG+AGG | 0.623573 | 6.3:-68397889 | MS.gene022173:CDS |
| AGCTCGAGCCTCGTGTCCAG+GGG | 0.623716 | 6.3:-68400469 | MS.gene022173:CDS |
| AATATATTGCGTAACAGGAG+AGG | 0.626761 | 6.3:+68401496 | None:intergenic |
| GGATTGAAACAACGGACATG+AGG | 0.632408 | 6.3:-68397259 | MS.gene022173:CDS |
| ATATATCAGGATTGAAACAA+CGG | 0.638072 | 6.3:-68397267 | MS.gene022173:intron |
| CAAAGCAGCTTATAGCACAA+AGG | 0.639329 | 6.3:-68402724 | MS.gene022173:CDS |
| ATTGCGTAACAGGAGAGGAA+AGG | 0.649302 | 6.3:+68401501 | None:intergenic |
| ATATGGATCTGAGTGGCAAG+AGG | 0.653218 | 6.3:-68400708 | MS.gene022173:CDS |
| TCTAAATCTACAGCTTAACA+TGG | 0.653637 | 6.3:-68400738 | MS.gene022173:intron |
| CGAACCCATCCAACCAACCG+AGG | 0.655141 | 6.3:-68397709 | MS.gene022173:CDS |
| CGACGAACCAACTGACGACG+AGG | 0.657612 | 6.3:-68397527 | MS.gene022173:CDS |
| GTGTGTTTAAAGTCAGGACA+TGG | 0.661363 | 6.3:-68401530 | MS.gene022173:CDS |
| ACGCTATATATTTGTGCACG+AGG | 0.663923 | 6.3:-68400645 | MS.gene022173:CDS |
| TATCGCCGCTTCGAAATCAA+CGG | 0.664718 | 6.3:-68402678 | MS.gene022173:intron |
| ATCAACTTTAGAAGGTGACG+TGG | 0.664833 | 6.3:+68399324 | None:intergenic |
| TAATGTACAAATCCAACCAA+GGG | 0.669573 | 6.3:+68400542 | None:intergenic |
| GTAATGTACAAATCCAACCA+AGG | 0.669580 | 6.3:+68400541 | None:intergenic |
| ACTCCGTCGTAACTGAGAGA+AGG | 0.671217 | 6.3:-68402880 | MS.gene022173:CDS |
| ATGTCCTGACTTTAAACACA+CGG | 0.673198 | 6.3:+68401532 | None:intergenic |
| CGTCGTCAGTTGGTTCGTCG+GGG | 0.674091 | 6.3:+68397530 | None:intergenic |
| GATGACAACAGTGTTGACTG+AGG | 0.683653 | 6.3:-68400600 | MS.gene022173:CDS |
| TAACCTTCTCTCAGTTACGA+CGG | 0.692644 | 6.3:+68402877 | None:intergenic |
| GGTTACCGTTGATTTCGAAG+CGG | 0.709677 | 6.3:+68402673 | None:intergenic |
| CCTCTTCTTCCAAAACAAAG+CGG | 0.723548 | 6.3:+68400519 | None:intergenic |
| GAGACGCTCCAACGTCACCG+TGG | 0.735483 | 6.3:-68402923 | MS.gene022173:CDS |
| AAGGGCCATATGGATCTGAG+TGG | 0.737924 | 6.3:-68400715 | MS.gene022173:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAAAAAACAATAAAGAA+AGG | - | chr6.3:68401796-68401815 | MS.gene022173:intron | 10.0% |
| !! | ATTCTCAAAATAAAAATTTA+AGG | - | chr6.3:68400553-68400572 | MS.gene022173:CDS | 10.0% |
| !! | GAAATACAATTAAATTAATA+AGG | + | chr6.3:68400207-68400226 | None:intergenic | 10.0% |
| !! | TTCAATTTATAAATTTGTAA+TGG | - | chr6.3:68400448-68400467 | MS.gene022173:CDS | 10.0% |
| !!! | AAAAATTTTATTTAGATTCA+TGG | - | chr6.3:68401677-68401696 | MS.gene022173:intron | 10.0% |
| !!! | CTTTTTTTTTAAAATTTTGA+AGG | - | chr6.3:68402151-68402170 | MS.gene022173:intron | 10.0% |
| !!! | TAGTTTATTTTTATTTTAGT+CGG | - | chr6.3:68402739-68402758 | MS.gene022173:CDS | 10.0% |
| !!! | TTCTTTTTTTAAAATTTTGA+AGG | - | chr6.3:68402331-68402350 | MS.gene022173:intron | 10.0% |
| !!! | TTTCTTTTTTAAAATTTTGA+AGG | - | chr6.3:68402684-68402703 | MS.gene022173:CDS | 10.0% |
| !! | AAGGAAATTAAGATATTTAA+TGG | - | chr6.3:68401815-68401834 | MS.gene022173:intron | 15.0% |
| !! | ATAGAATATAGATATATATG+CGG | + | chr6.3:68400333-68400352 | None:intergenic | 15.0% |
| !! | ATTATAGATAATCAATCTAA+TGG | + | chr6.3:68401015-68401034 | None:intergenic | 15.0% |
| !! | TGATAGTATAAACAAATAAA+AGG | + | chr6.3:68399299-68399318 | None:intergenic | 15.0% |
| !! | TTCATAATTCTCATAATATT+TGG | - | chr6.3:68400663-68400682 | MS.gene022173:CDS | 15.0% |
| !!! | AAATTTGTTTATTGAATTAG+CGG | + | chr6.3:68398322-68398341 | None:intergenic | 15.0% |
| !!! | CAATTTATTGATTTTTTTAC+AGG | - | chr6.3:68399924-68399943 | MS.gene022173:intron | 15.0% |
| !! | AAAAAAGAAAAGAAAAGTCT+GGG | - | chr6.3:68401762-68401781 | MS.gene022173:intron | 20.0% |
| !! | AGAGATAAAAAATTCAATGA+TGG | + | chr6.3:68400107-68400126 | None:intergenic | 20.0% |
| !! | AGATAAAGAATTAGAAACAA+AGG | + | chr6.3:68402857-68402876 | None:intergenic | 20.0% |
| !! | AGTTTATGAAAGTAGAAAAT+AGG | + | chr6.3:68400628-68400647 | None:intergenic | 20.0% |
| !! | ATAAAATCAAATATACTCAC+AGG | + | chr6.3:68402121-68402140 | None:intergenic | 20.0% |
| !! | ATATCAAAGATCATATTAGA+TGG | + | chr6.3:68399965-68399984 | None:intergenic | 20.0% |
| !! | CTTACTACATTATTAATTAC+AGG | - | chr6.3:68398445-68398464 | MS.gene022173:intron | 20.0% |
| !! | GAAAAATCTAGAAAGTTATT+AGG | + | chr6.3:68400720-68400739 | None:intergenic | 20.0% |
| !! | GAATTATGAAAGTAGAAAAT+AGG | + | chr6.3:68400653-68400672 | None:intergenic | 20.0% |
| !! | GTAAACACTTGTAATTTAAT+GGG | - | chr6.3:68398937-68398956 | MS.gene022173:intron | 20.0% |
| !! | GTGTAATAGACTTATATATA+AGG | - | chr6.3:68400353-68400372 | MS.gene022173:intron | 20.0% |
| !! | TAAAAAAGAAAAGAAAAGTC+TGG | - | chr6.3:68401761-68401780 | MS.gene022173:intron | 20.0% |
| !! | TAGTATAAACAAATAAAAGG+TGG | + | chr6.3:68399296-68399315 | None:intergenic | 20.0% |
| !! | TATCAAAGATCATATTAGAT+GGG | + | chr6.3:68399964-68399983 | None:intergenic | 20.0% |
| !! | TTAATATTTCAACATAGCTA+TGG | - | chr6.3:68398514-68398533 | MS.gene022173:intron | 20.0% |
| !! | TTGAAGTAAGAACAATATTA+TGG | - | chr6.3:68400508-68400527 | MS.gene022173:CDS | 20.0% |
| !!! | AAATGCCTTTTTTATTAGTT+CGG | - | chr6.3:68401252-68401271 | MS.gene022173:intron | 20.0% |
| !!! | ATTTTTACACTAGTAAACTA+AGG | - | chr6.3:68400060-68400079 | MS.gene022173:intron | 20.0% |
| !!! | ATTTTTCTTCTACTTTTTTG+TGG | - | chr6.3:68401549-68401568 | MS.gene022173:intron | 20.0% |
| !!! | GAATTTTGTTTTTATCATGA+GGG | - | chr6.3:68399260-68399279 | MS.gene022173:intron | 20.0% |
| !!! | GTTTCTTTTTAAAGTTTTGA+AGG | - | chr6.3:68402509-68402528 | MS.gene022173:intron | 20.0% |
| !!! | TGAATTTTGTTTTTATCATG+AGG | - | chr6.3:68399259-68399278 | MS.gene022173:intron | 20.0% |
| !!! | TTTTGTAGTACTTTTTATCA+GGG | - | chr6.3:68402802-68402821 | MS.gene022173:intron | 20.0% |
| !!! | TTTTTCAATTGAGATAATGA+AGG | - | chr6.3:68398061-68398080 | MS.gene022173:CDS | 20.0% |
| !!! | TTTTTCTTCTACTTTTTTGT+GGG | - | chr6.3:68401550-68401569 | MS.gene022173:intron | 20.0% |
| !!! | TTTTTGTAGTACTTTTTATC+AGG | - | chr6.3:68402801-68402820 | MS.gene022173:intron | 20.0% |
| ! | AAAAAGAAAAGAAAAGTCTG+GGG | - | chr6.3:68401763-68401782 | MS.gene022173:intron | 25.0% |
| ! | AAAAATCAATGCTAACCTTT+CGG | + | chr6.3:68402786-68402805 | None:intergenic | 25.0% |
| ! | AAAAATTTAAGGATCTTTGC+AGG | - | chr6.3:68400564-68400583 | MS.gene022173:CDS | 25.0% |
| ! | AACGAAGACTAAACATAAAA+AGG | + | chr6.3:68400764-68400783 | None:intergenic | 25.0% |
| ! | ACGAAGACTAAACATAAAAA+GGG | + | chr6.3:68400763-68400782 | None:intergenic | 25.0% |
| ! | AGAGAATTATTATGTTGCAA+AGG | - | chr6.3:68399802-68399821 | MS.gene022173:intron | 25.0% |
| ! | ATAAAATCAACTATACTCAC+AGG | + | chr6.3:68402483-68402502 | None:intergenic | 25.0% |
| ! | ATAATGAAGGTAAAAATGAG+AGG | - | chr6.3:68398074-68398093 | MS.gene022173:CDS | 25.0% |
| ! | ATAATGTAGTAAGTAGAAGT+TGG | + | chr6.3:68398438-68398457 | None:intergenic | 25.0% |
| ! | ATAGTAACCTATAGTTTCTA+AGG | - | chr6.3:68398479-68398498 | MS.gene022173:intron | 25.0% |
| ! | ATATATCAGGATTGAAACAA+CGG | - | chr6.3:68402885-68402904 | MS.gene022173:CDS | 25.0% |
| ! | ATATATTCAGAGACTTCTTA+AGG | - | chr6.3:68398672-68398691 | MS.gene022173:intron | 25.0% |
| ! | GGTAAACACTTGTAATTTAA+TGG | - | chr6.3:68398936-68398955 | MS.gene022173:intron | 25.0% |
| ! | TAATGTAGTAAGTAGAAGTT+GGG | + | chr6.3:68398437-68398456 | None:intergenic | 25.0% |
| ! | TGTAAGTTTGTATAACTCTT+TGG | + | chr6.3:68398205-68398224 | None:intergenic | 25.0% |
| ! | TTAATACATCCAAGATATCA+TGG | + | chr6.3:68401307-68401326 | None:intergenic | 25.0% |
| ! | TTATAAAGTATGAGCTCAAA+TGG | - | chr6.3:68398103-68398122 | MS.gene022173:CDS | 25.0% |
| ! | TTCCTATCAAAATTTATACC+TGG | - | chr6.3:68401936-68401955 | MS.gene022173:intron | 25.0% |
| ! | TTTGTATAACTCTTTGGTAA+TGG | + | chr6.3:68398199-68398218 | None:intergenic | 25.0% |
| !! | AAAAACAATTAAGCACCTTT+TGG | + | chr6.3:68399753-68399772 | None:intergenic | 25.0% |
| !! | AAAACAATTAAGCACCTTTT+GGG | + | chr6.3:68399752-68399771 | None:intergenic | 25.0% |
| !! | AAAAGCAGAGAAATATTTTC+TGG | + | chr6.3:68400244-68400263 | None:intergenic | 25.0% |
| !! | ACAAAAAATATTAGCCTAGA+TGG | + | chr6.3:68401109-68401128 | None:intergenic | 25.0% |
| !! | ACAGTTATATTTGTTGAGTA+TGG | - | chr6.3:68398750-68398769 | MS.gene022173:intron | 25.0% |
| !! | ATAACACTTACAATTTTGCA+GGG | + | chr6.3:68400870-68400889 | None:intergenic | 25.0% |
| !! | ATTATAGCCTTAGAAACTAT+AGG | + | chr6.3:68398489-68398508 | None:intergenic | 25.0% |
| !! | CTCTACTATCTTTCTTTTAT+TGG | - | chr6.3:68401438-68401457 | MS.gene022173:intron | 25.0% |
| !! | GCTTATTTGAGTTTATCTAT+TGG | + | chr6.3:68397817-68397836 | None:intergenic | 25.0% |
| !! | GTTAGCTTATTCATTGAAAT+GGG | - | chr6.3:68399366-68399385 | MS.gene022173:intron | 25.0% |
| !! | TGTTAGCTTATTCATTGAAA+TGG | - | chr6.3:68399365-68399384 | MS.gene022173:intron | 25.0% |
| !! | TTAACTGAATTTGAAGTGTT+TGG | - | chr6.3:68397918-68397937 | MS.gene022173:CDS | 25.0% |
| !! | TTTGTAATGGTAATGTTAGT+TGG | - | chr6.3:68400461-68400480 | MS.gene022173:CDS | 25.0% |
| !!! | AATGCCTTTTTTATTAGTTC+GGG | - | chr6.3:68401253-68401272 | MS.gene022173:intron | 25.0% |
| !!! | ATACTATTTTGAAGAACTTG+TGG | + | chr6.3:68397780-68397799 | None:intergenic | 25.0% |
| !!! | ATATTTTCTGGAATGCATTA+AGG | + | chr6.3:68400232-68400251 | None:intergenic | 25.0% |
| !!! | CCTTAAGTATTGATAAAGAA+GGG | + | chr6.3:68401402-68401421 | None:intergenic | 25.0% |
| !!! | TATCTGTTGATTCATATATC+AGG | - | chr6.3:68402872-68402891 | MS.gene022173:CDS | 25.0% |
| !!! | TCCTTAAGTATTGATAAAGA+AGG | + | chr6.3:68401403-68401422 | None:intergenic | 25.0% |
| !!! | TGAAGCTAAAACTATTTTTG+AGG | - | chr6.3:68400973-68400992 | MS.gene022173:intron | 25.0% |
| AACACTTGTAATTTAATGGG+TGG | - | chr6.3:68398940-68398959 | MS.gene022173:intron | 30.0% | |
| AAGACTAAACATAAAAAGGG+AGG | + | chr6.3:68400760-68400779 | None:intergenic | 30.0% | |
| AATCATGATCTATATCACCA+AGG | + | chr6.3:68402538-68402557 | None:intergenic | 30.0% | |
| AATTCCGAAATACATCCTAT+TGG | + | chr6.3:68402926-68402945 | None:intergenic | 30.0% | |
| AGACTAAACATAAAAAGGGA+GGG | + | chr6.3:68400759-68400778 | None:intergenic | 30.0% | |
| AGTTCATACACATAAAGTAC+TGG | + | chr6.3:68399661-68399680 | None:intergenic | 30.0% | |
| ATAGGACAATCATGAACAAT+AGG | + | chr6.3:68399162-68399181 | None:intergenic | 30.0% | |
| ATCCAACAGTTATAGATCAA+TGG | + | chr6.3:68401361-68401380 | None:intergenic | 30.0% | |
| CAAGTTTGATATGAATGGAA+GGG | - | chr6.3:68400143-68400162 | MS.gene022173:CDS | 30.0% | |
| CACATTGGACAAGATATAAT+TGG | + | chr6.3:68401497-68401516 | None:intergenic | 30.0% | |
| CATGTCAAGTTTGATATGAA+TGG | - | chr6.3:68400138-68400157 | MS.gene022173:CDS | 30.0% | |
| CCAAATAGTAACAAAGTCTT+AGG | + | chr6.3:68397854-68397873 | None:intergenic | 30.0% | |
| CCCTTCTTTATCAATACTTA+AGG | - | chr6.3:68401399-68401418 | MS.gene022173:intron | 30.0% | |
| CCTAAGACTTTGTTACTATT+TGG | - | chr6.3:68397851-68397870 | MS.gene022173:intron | 30.0% | |
| CTATCAAAATTTATACCTGG+TGG | - | chr6.3:68401939-68401958 | MS.gene022173:intron | 30.0% | |
| CTCGACTTTCAACTTAAATT+TGG | - | chr6.3:68401970-68401989 | MS.gene022173:intron | 30.0% | |
| CTGGAAATAAGGTAAAACTT+AGG | + | chr6.3:68398594-68398613 | None:intergenic | 30.0% | |
| GATATCTTGATAGATAACCT+GGG | + | chr6.3:68400695-68400714 | None:intergenic | 30.0% | |
| GCATGATCTATATCACAAAA+AGG | + | chr6.3:68402180-68402199 | None:intergenic | 30.0% | |
| GCATTTAACAAACTCAAAAG+CGG | + | chr6.3:68397503-68397522 | None:intergenic | 30.0% | |
| TAATGTACAAATCCAACCAA+GGG | + | chr6.3:68399613-68399632 | None:intergenic | 30.0% | |
| TACCAAGAACATAAAAAAGG+AGG | + | chr6.3:68399339-68399358 | None:intergenic | 30.0% | |
| TAGGACAATCATGAACAATA+GGG | + | chr6.3:68399161-68399180 | None:intergenic | 30.0% | |
| TATAGCATAAACACTGATCA+TGG | - | chr6.3:68397609-68397628 | MS.gene022173:intron | 30.0% | |
| TATTTCTTGTGTAGATAGGA+TGG | - | chr6.3:68401901-68401920 | MS.gene022173:intron | 30.0% | |
| TCAAGTTTGATATGAATGGA+AGG | - | chr6.3:68400142-68400161 | MS.gene022173:CDS | 30.0% | |
| TCTAAATCTACAGCTTAACA+TGG | - | chr6.3:68399414-68399433 | MS.gene022173:intron | 30.0% | |
| TCTTCTTGTAGACATATATG+TGG | + | chr6.3:68400284-68400303 | None:intergenic | 30.0% | |
| TGATATCTTGATAGATAACC+TGG | + | chr6.3:68400696-68400715 | None:intergenic | 30.0% | |
| TTAGCCAATAGGATGTATTT+CGG | - | chr6.3:68402919-68402938 | MS.gene022173:CDS | 30.0% | |
| TTATCTGTTTGTGTAGAGTT+GGG | - | chr6.3:68399092-68399111 | MS.gene022173:intron | 30.0% | |
| TTCAATGAATAAGCTAACAC+AGG | + | chr6.3:68399364-68399383 | None:intergenic | 30.0% | |
| TTGAGTATGGCTCAAATTAA+CGG | - | chr6.3:68398763-68398782 | MS.gene022173:intron | 30.0% | |
| TTGTTCATGATTGTCCTATT+TGG | - | chr6.3:68399163-68399182 | MS.gene022173:intron | 30.0% | |
| TTTATCTGTTTGTGTAGAGT+TGG | - | chr6.3:68399091-68399110 | MS.gene022173:intron | 30.0% | |
| ! | AAACTCATTCTGACTTTTGA+TGG | - | chr6.3:68399775-68399794 | MS.gene022173:intron | 30.0% |
| ! | AAGGTATTTCTTGTGTAGAT+AGG | - | chr6.3:68401897-68401916 | MS.gene022173:intron | 30.0% |
| ! | CATAACACTTACAATTTTGC+AGG | + | chr6.3:68400871-68400890 | None:intergenic | 30.0% |
| ! | GTTTTCCAATAATGTAATGC+TGG | + | chr6.3:68398997-68399016 | None:intergenic | 30.0% |
| ! | TAACACTTACAATTTTGCAG+GGG | + | chr6.3:68400869-68400888 | None:intergenic | 30.0% |
| ! | TACGTTTTTCTTACTCTAGA+CGG | - | chr6.3:68401152-68401171 | MS.gene022173:intron | 30.0% |
| ! | TCAAAGGGGAATATGTTTTA+TGG | + | chr6.3:68401072-68401091 | None:intergenic | 30.0% |
| ! | TGAATGAGGAAAAAGTTTTG+AGG | + | chr6.3:68397332-68397351 | None:intergenic | 30.0% |
| ! | TGTTTTCATAAGCTATCATG+AGG | - | chr6.3:68397703-68397722 | MS.gene022173:CDS | 30.0% |
| ! | TTACACTGAAGGTGAATTTT+TGG | + | chr6.3:68399202-68399221 | None:intergenic | 30.0% |
| !! | AATTAGACACTCGTCATTTT+AGG | + | chr6.3:68398278-68398297 | None:intergenic | 30.0% |
| !! | AGTACTTTTTATCAGGGTAT+AGG | - | chr6.3:68402808-68402827 | MS.gene022173:intron | 30.0% |
| !! | CACCAGGTATAAATTTTGAT+AGG | + | chr6.3:68401941-68401960 | None:intergenic | 30.0% |
| !! | CTAAGTTTTACCTTATTTCC+AGG | - | chr6.3:68398592-68398611 | MS.gene022173:intron | 30.0% |
| !! | TTTAGTCTTCGTTTTGTTGA+CGG | - | chr6.3:68400771-68400790 | MS.gene022173:intron | 30.0% |
| !!! | ACTTTTTTTGTAGAACTGCA+TGG | - | chr6.3:68399992-68400011 | MS.gene022173:intron | 30.0% |
| !!! | ATAATATTTGGTTTTAGCCC+AGG | - | chr6.3:68400675-68400694 | MS.gene022173:CDS | 30.0% |
| !!! | CTTTTTTTGTAGAACTGCAT+GGG | - | chr6.3:68399993-68400012 | MS.gene022173:intron | 30.0% |
| !!! | TAAAGTTTTGAAGGAAACCT+TGG | - | chr6.3:68402518-68402537 | MS.gene022173:intron | 30.0% |
| !!! | TCCTTTTTTATGTTCTTGGT+AGG | - | chr6.3:68399338-68399357 | MS.gene022173:CDS | 30.0% |
| AACTGATAAGCTGACTGATA+GGG | - | chr6.3:68397889-68397908 | MS.gene022173:CDS | 35.0% | |
| AAGGACACAACTTATAGTCT+AGG | - | chr6.3:68399821-68399840 | MS.gene022173:intron | 35.0% | |
| AATATATTGCGTAACAGGAG+AGG | + | chr6.3:68398659-68398678 | None:intergenic | 35.0% | |
| AATCTACAGCTTAACATGGA+AGG | - | chr6.3:68399418-68399437 | MS.gene022173:intron | 35.0% | |
| ACAAATATATAGCGTGCTTC+AGG | + | chr6.3:68399502-68399521 | None:intergenic | 35.0% | |
| ACCATTGGATCAACTTTAGA+AGG | + | chr6.3:68400839-68400858 | None:intergenic | 35.0% | |
| AGCTTATTCATTGAAATGGG+CGG | - | chr6.3:68399369-68399388 | MS.gene022173:intron | 35.0% | |
| AGGAGCTTATGAAAATAAGC+TGG | - | chr6.3:68397723-68397742 | MS.gene022173:CDS | 35.0% | |
| AGGCTTATACAAAAGCAGTT+AGG | + | chr6.3:68400187-68400206 | None:intergenic | 35.0% | |
| ATCTACAGCTTAACATGGAA+GGG | - | chr6.3:68399419-68399438 | MS.gene022173:intron | 35.0% | |
| ATGTCCTGACTTTAAACACA+CGG | + | chr6.3:68398623-68398642 | None:intergenic | 35.0% | |
| CAACCAAAACCATGATATCT+TGG | - | chr6.3:68401295-68401314 | MS.gene022173:intron | 35.0% | |
| CAGACCCGAACTAATAAAAA+AGG | + | chr6.3:68401260-68401279 | None:intergenic | 35.0% | |
| CTCCATTGATCTATAACTGT+TGG | - | chr6.3:68401356-68401375 | MS.gene022173:intron | 35.0% | |
| CTCTGAATATATTGCGTAAC+AGG | + | chr6.3:68398664-68398683 | None:intergenic | 35.0% | |
| GACTAAACATAAAAAGGGAG+GGG | + | chr6.3:68400758-68400777 | None:intergenic | 35.0% | |
| GATAAACAGCTTATTTCGCA+TGG | - | chr6.3:68397584-68397603 | MS.gene022173:intron | 35.0% | |
| GCCTACCAAGAACATAAAAA+AGG | + | chr6.3:68399342-68399361 | None:intergenic | 35.0% | |
| GGCTTATACAAAAGCAGTTA+GGG | + | chr6.3:68400186-68400205 | None:intergenic | 35.0% | |
| GTAAAACTTAGGCACATTGA+AGG | + | chr6.3:68398583-68398602 | None:intergenic | 35.0% | |
| GTAATGTACAAATCCAACCA+AGG | + | chr6.3:68399614-68399633 | None:intergenic | 35.0% | |
| GTCTATCATATCTACAGAGA+AGG | - | chr6.3:68401878-68401897 | MS.gene022173:intron | 35.0% | |
| TAACTGATAAGCTGACTGAT+AGG | - | chr6.3:68397888-68397907 | MS.gene022173:CDS | 35.0% | |
| TAAGCTGTTTATCCAAACAG+AGG | + | chr6.3:68397577-68397596 | None:intergenic | 35.0% | |
| TAATCATCAGAGAGAAATCG+CGG | + | chr6.3:68401469-68401488 | None:intergenic | 35.0% | |
| TCAAATAAGCTAATCCAGAC+AGG | - | chr6.3:68397827-68397846 | MS.gene022173:intron | 35.0% | |
| TCATAGGGTTATGACTATGA+CGG | - | chr6.3:68398873-68398892 | MS.gene022173:intron | 35.0% | |
| TCTTCTTTCTCTTACACTGA+AGG | + | chr6.3:68399213-68399232 | None:intergenic | 35.0% | |
| TGATAGACTTAAATTGCGCA+TGG | + | chr6.3:68401866-68401885 | None:intergenic | 35.0% | |
| TGTAGACATATATGTGGTTC+AGG | + | chr6.3:68400278-68400297 | None:intergenic | 35.0% | |
| TGTTACACACAACTGTTTGT+AGG | - | chr6.3:68401609-68401628 | MS.gene022173:intron | 35.0% | |
| TTATCAGGGTATAGGATTGA+GGG | - | chr6.3:68402816-68402835 | MS.gene022173:intron | 35.0% | |
| TTCAAAAACACTCGTGAATG+AGG | + | chr6.3:68397346-68397365 | None:intergenic | 35.0% | |
| TTCCAATAATGTAATGCTGG+AGG | + | chr6.3:68398994-68399013 | None:intergenic | 35.0% | |
| TTTATCAGGGTATAGGATTG+AGG | - | chr6.3:68402815-68402834 | MS.gene022173:intron | 35.0% | |
| ! | AACACTTACAATTTTGCAGG+GGG | + | chr6.3:68400868-68400887 | None:intergenic | 35.0% |
| ! | ACCAAACTGCTATCTTTTGA+CGG | + | chr6.3:68398241-68398260 | None:intergenic | 35.0% |
| ! | AGTTGGGTGTAGCTTAATTT+TGG | + | chr6.3:68398421-68398440 | None:intergenic | 35.0% |
| ! | CAATTTTCACAACCTCTCAT+AGG | - | chr6.3:68402027-68402046 | MS.gene022173:intron | 35.0% |
| ! | CATCCAAGATATCATGGTTT+TGG | + | chr6.3:68401301-68401320 | None:intergenic | 35.0% |
| ! | GAAAAGAGCACAAACCAAAT+AGG | + | chr6.3:68399180-68399199 | None:intergenic | 35.0% |
| ! | GCTCAAATTAACGGATAAGT+GGG | - | chr6.3:68398772-68398791 | MS.gene022173:intron | 35.0% |
| ! | GTTCCATGTTGTAGTACTTT+TGG | - | chr6.3:68401199-68401218 | MS.gene022173:intron | 35.0% |
| ! | GTTGGGTGTAGCTTAATTTT+GGG | + | chr6.3:68398420-68398439 | None:intergenic | 35.0% |
| ! | TTGGGTGTAGCTTAATTTTG+GGG | + | chr6.3:68398419-68398438 | None:intergenic | 35.0% |
| !! | ACCTTCTAAAGTTGATCCAA+TGG | - | chr6.3:68400835-68400854 | MS.gene022173:intron | 35.0% |
| !! | ATATTTCTCTGCTTTTGAGC+AGG | - | chr6.3:68400248-68400267 | MS.gene022173:intron | 35.0% |
| !! | TTGCCAAAAGTACTACAACA+TGG | + | chr6.3:68401205-68401224 | None:intergenic | 35.0% |
| !!! | GTCCTCCTTTTTTATGTTCT+TGG | - | chr6.3:68399334-68399353 | MS.gene022173:CDS | 35.0% |
| !!! | TGTACATTACCGCTTTGTTT+TGG | - | chr6.3:68399624-68399643 | MS.gene022173:intron | 35.0% |
| !!! | TTCTACTTTTTTGTGGGATG+AGG | - | chr6.3:68401556-68401575 | MS.gene022173:intron | 35.0% |
| AAAGGTGAAGCGTAGAGAAA+TGG | - | chr6.3:68399471-68399490 | MS.gene022173:intron | 40.0% | |
| AAGAAGGGTCAACAAGAATG+CGG | + | chr6.3:68401387-68401406 | None:intergenic | 40.0% | |
| AATACCCCATCGTACAGTTT+AGG | - | chr6.3:68398913-68398932 | MS.gene022173:intron | 40.0% | |
| ACATGAGGAAGTTAGCCAAT+AGG | - | chr6.3:68402908-68402927 | MS.gene022173:CDS | 40.0% | |
| ACGCTATATATTTGTGCACG+AGG | - | chr6.3:68399507-68399526 | MS.gene022173:intron | 40.0% | |
| ACTAGTCGTCAAGAAGATAG+TGG | - | chr6.3:68399586-68399605 | MS.gene022173:intron | 40.0% | |
| ACTGATAAGCTGACTGATAG+GGG | - | chr6.3:68397890-68397909 | MS.gene022173:CDS | 40.0% | |
| AGCCTCCAGCATTACATTAT+TGG | - | chr6.3:68398989-68399008 | MS.gene022173:intron | 40.0% | |
| AGGATTGGGAAAGCTTCTAA+TGG | - | chr6.3:68399708-68399727 | MS.gene022173:intron | 40.0% | |
| ATACCCCATCGTACAGTTTA+GGG | - | chr6.3:68398914-68398933 | MS.gene022173:intron | 40.0% | |
| ATAGATATCACACCAGATCG+TGG | - | chr6.3:68401702-68401721 | MS.gene022173:intron | 40.0% | |
| CAAAGCAGCTTATAGCACAA+AGG | - | chr6.3:68397428-68397447 | MS.gene022173:intron | 40.0% | |
| CAAATAACCACGTGATGCTA+GGG | + | chr6.3:68400388-68400407 | None:intergenic | 40.0% | |
| CAGTTGTGTGTAACAATCAG+AGG | + | chr6.3:68401604-68401623 | None:intergenic | 40.0% | |
| CCTCTTCTTCCAAAACAAAG+CGG | + | chr6.3:68399636-68399655 | None:intergenic | 40.0% | |
| GAAAGATAGTAGAGTTTGCG+AGG | + | chr6.3:68401432-68401451 | None:intergenic | 40.0% | |
| GCTTATTCATTGAAATGGGC+GGG | - | chr6.3:68399370-68399389 | MS.gene022173:intron | 40.0% | |
| GTCAACACAGATAGCTCAAA+GGG | + | chr6.3:68401087-68401106 | None:intergenic | 40.0% | |
| TAACAGTGATTGACATGTCG+AGG | + | chr6.3:68400418-68400437 | None:intergenic | 40.0% | |
| TAACCTTCTCTCAGTTACGA+CGG | + | chr6.3:68397278-68397297 | None:intergenic | 40.0% | |
| TAGACTTAAATTGCGCATGG+AGG | + | chr6.3:68401863-68401882 | None:intergenic | 40.0% | |
| TATTGAGCTTATCGCCCAAA+AGG | - | chr6.3:68399735-68399754 | MS.gene022173:intron | 40.0% | |
| TCAACACAGATAGCTCAAAG+GGG | + | chr6.3:68401086-68401105 | None:intergenic | 40.0% | |
| TCCGTCAAAAGATAGCAGTT+TGG | - | chr6.3:68398237-68398256 | MS.gene022173:intron | 40.0% | |
| TCTCCATCTGCATATGAGAA+CGG | + | chr6.3:68400919-68400938 | None:intergenic | 40.0% | |
| TGTCGTGCTAACTGTTCAAA+GGG | - | chr6.3:68400019-68400038 | MS.gene022173:intron | 40.0% | |
| TTACCCCTAAACTGTACGAT+GGG | + | chr6.3:68398921-68398940 | None:intergenic | 40.0% | |
| TTACGCATTTAGCCTCTGTT+TGG | - | chr6.3:68397562-68397581 | MS.gene022173:CDS | 40.0% | |
| TTGAGCATGGATCAGTCATA+GGG | - | chr6.3:68398858-68398877 | MS.gene022173:intron | 40.0% | |
| TTTACCCCTAAACTGTACGA+TGG | + | chr6.3:68398922-68398941 | None:intergenic | 40.0% | |
| TTTATCATGAGGGCAAGCAT+TGG | - | chr6.3:68399270-68399289 | MS.gene022173:intron | 40.0% | |
| TTTCCGTTCTCATATGCAGA+TGG | - | chr6.3:68400913-68400932 | MS.gene022173:intron | 40.0% | |
| TTTGAGCATGGATCAGTCAT+AGG | - | chr6.3:68398857-68398876 | MS.gene022173:intron | 40.0% | |
| ! | ACAAAACCATTCCGTTTTGC+AGG | - | chr6.3:68397371-68397390 | MS.gene022173:intron | 40.0% |
| ! | ACACTTACAATTTTGCAGGG+GGG | + | chr6.3:68400867-68400886 | None:intergenic | 40.0% |
| ! | ATCAACTTTAGAAGGTGACG+TGG | + | chr6.3:68400831-68400850 | None:intergenic | 40.0% |
| ! | CAATTTTCACAACCTCTCGT+AGG | - | chr6.3:68402389-68402408 | MS.gene022173:intron | 40.0% |
| ! | GGCTCAAATTAACGGATAAG+TGG | - | chr6.3:68398771-68398790 | MS.gene022173:intron | 40.0% |
| ! | GTGTGTTTAAAGTCAGGACA+TGG | - | chr6.3:68398622-68398641 | MS.gene022173:intron | 40.0% |
| ! | TCATGCTCAGTTGATTGGTT+GGG | + | chr6.3:68402088-68402107 | None:intergenic | 40.0% |
| ! | TCTTCTTGACGACTAGTTGA+AGG | + | chr6.3:68399583-68399602 | None:intergenic | 40.0% |
| ! | TGGGTGTAGCTTAATTTTGG+GGG | + | chr6.3:68398418-68398437 | None:intergenic | 40.0% |
| AAAACAGTTACGCCACGATC+TGG | + | chr6.3:68401717-68401736 | None:intergenic | 45.0% | |
| AAAGAAAAGTCTGGGGACTC+AGG | - | chr6.3:68401770-68401789 | MS.gene022173:intron | 45.0% | |
| ACAAAGTCTTAGGTCCTGTC+TGG | + | chr6.3:68397844-68397863 | None:intergenic | 45.0% | |
| ACGCAGACAAGAACAGACAA+TGG | + | chr6.3:68399068-68399087 | None:intergenic | 45.0% | |
| AGAGGTCATGACTTTGAGCA+TGG | - | chr6.3:68398845-68398864 | MS.gene022173:intron | 45.0% | |
| AGTCGAGATAGAATTCCACC+AGG | + | chr6.3:68401957-68401976 | None:intergenic | 45.0% | |
| ATATGGATCTGAGTGGCAAG+AGG | - | chr6.3:68399444-68399463 | MS.gene022173:intron | 45.0% | |
| ATGTTTACCCTAGCATCACG+TGG | - | chr6.3:68400378-68400397 | MS.gene022173:intron | 45.0% | |
| ATTGCGTAACAGGAGAGGAA+AGG | + | chr6.3:68398654-68398673 | None:intergenic | 45.0% | |
| ATTTCGAAGCGGCGATAATC+GGG | + | chr6.3:68397471-68397490 | None:intergenic | 45.0% | |
| CAACCAATCAACTGAGCATG+AGG | - | chr6.3:68402087-68402106 | MS.gene022173:intron | 45.0% | |
| CAATCTAATGGTGCAGTGAG+TGG | + | chr6.3:68401003-68401022 | None:intergenic | 45.0% | |
| CAATGCTAACCTTTCGGCAT+CGG | + | chr6.3:68402780-68402799 | None:intergenic | 45.0% | |
| CCTCTCATAGGACATGACTT+CGG | - | chr6.3:68402221-68402240 | MS.gene022173:intron | 45.0% | |
| CTCATGCTCAGTTGATTGGT+TGG | + | chr6.3:68402089-68402108 | None:intergenic | 45.0% | |
| CTCGTGACTCATGACTATAC+AGG | + | chr6.3:68399121-68399140 | None:intergenic | 45.0% | |
| CTCTCATAGGACATGACTTC+GGG | - | chr6.3:68402222-68402241 | MS.gene022173:intron | 45.0% | |
| CTGATAAGCTGACTGATAGG+GGG | - | chr6.3:68397891-68397910 | MS.gene022173:CDS | 45.0% | |
| CTGTCGTGCTAACTGTTCAA+AGG | - | chr6.3:68400018-68400037 | MS.gene022173:intron | 45.0% | |
| CTTAACATGGAAGGGCCATA+TGG | - | chr6.3:68399427-68399446 | MS.gene022173:intron | 45.0% | |
| CTTTGCGAGTACCTGCAAAA+CGG | + | chr6.3:68397385-68397404 | None:intergenic | 45.0% | |
| GATTTCGAAGCGGCGATAAT+CGG | + | chr6.3:68397472-68397491 | None:intergenic | 45.0% | |
| GCAAATAACCACGTGATGCT+AGG | + | chr6.3:68400389-68400408 | None:intergenic | 45.0% | |
| GGAGTTGTTGTGTGTTGCAT+TGG | + | chr6.3:68397257-68397276 | None:intergenic | 45.0% | |
| GGATTGAAACAACGGACATG+AGG | - | chr6.3:68402893-68402912 | MS.gene022173:CDS | 45.0% | |
| GGTCAACACAGATAGCTCAA+AGG | + | chr6.3:68401088-68401107 | None:intergenic | 45.0% | |
| TACCCCATCGTACAGTTTAG+GGG | - | chr6.3:68398915-68398934 | MS.gene022173:intron | 45.0% | |
| TACCCCTAAACTGTACGATG+GGG | + | chr6.3:68398920-68398939 | None:intergenic | 45.0% | |
| TATCGCCGCTTCGAAATCAA+CGG | - | chr6.3:68397474-68397493 | MS.gene022173:intron | 45.0% | |
| TCACAACCTCTCATAGGACA+CGG | - | chr6.3:68402033-68402052 | MS.gene022173:intron | 45.0% | |
| TCTTGCCACTCAGATCCATA+TGG | + | chr6.3:68399445-68399464 | None:intergenic | 45.0% | |
| TGAGTGGCAAGAGGAAGAAA+AGG | - | chr6.3:68399453-68399472 | MS.gene022173:intron | 45.0% | |
| TTTAAACACACGGAGAGACC+TGG | + | chr6.3:68398613-68398632 | None:intergenic | 45.0% | |
| ! | CATGCTCAGTTGATTGGTTG+GGG | + | chr6.3:68402087-68402106 | None:intergenic | 45.0% |
| ! | CGTTCTGTTGTCTGAGATGT+AGG | - | chr6.3:68399026-68399045 | MS.gene022173:intron | 45.0% |
| ! | CTCTCCGTGTGTTTAAAGTC+AGG | - | chr6.3:68398616-68398635 | MS.gene022173:intron | 45.0% |
| ! | GCTATCTGTGTTGACCATCT+AGG | - | chr6.3:68401092-68401111 | MS.gene022173:intron | 45.0% |
| ! | GTCTGAGATGTAGGCACAAT+TGG | - | chr6.3:68399035-68399054 | MS.gene022173:intron | 45.0% |
| ! | TCAAGAAGATAGTGGTCCCT+TGG | - | chr6.3:68399594-68399613 | MS.gene022173:intron | 45.0% |
| !! | ACACTCGTCATTTTAGGCTC+TGG | + | chr6.3:68398272-68398291 | None:intergenic | 45.0% |
| !! | GATGACAACAGTGTTGACTG+AGG | - | chr6.3:68399552-68399571 | MS.gene022173:intron | 45.0% |
| !! | GGTTACCGTTGATTTCGAAG+CGG | + | chr6.3:68397482-68397501 | None:intergenic | 45.0% |
| !! | TCGTCATTTTAGGCTCTGGT+TGG | + | chr6.3:68398268-68398287 | None:intergenic | 45.0% |
| !! | TGTGTGTTGCATTGGTTCCA+CGG | + | chr6.3:68397249-68397268 | None:intergenic | 45.0% |
| !!! | CCGCTTTGTTTTGGAAGAAG+AGG | - | chr6.3:68399633-68399652 | MS.gene022173:intron | 45.0% |
| !!! | TCTGGCGTTGATACTTTTCC+AGG | - | chr6.3:68402058-68402077 | MS.gene022173:intron | 45.0% |
| AAGGGCCATATGGATCTGAG+TGG | - | chr6.3:68399437-68399456 | MS.gene022173:intron | 50.0% | |
| ACTCCGTCGTAACTGAGAGA+AGG | - | chr6.3:68397272-68397291 | MS.gene022173:intron | 50.0% | |
| AGACGCTTGAGCATAGTGAG+TGG | - | chr6.3:68398796-68398815 | MS.gene022173:intron | 50.0% | |
| AGGAATTTCAGCCTCGTCCT+CGG | + | chr6.3:68402463-68402482 | None:intergenic | 50.0% | |
| ATTTCAGCCTCGTCCTCAGT+TGG | + | chr6.3:68402279-68402298 | None:intergenic | 50.0% | |
| ATTTCAGCCTCGTCGTCAGT+TGG | + | chr6.3:68402635-68402654 | None:intergenic | 50.0% | |
| CACGGAGAGACCTGGAAATA+AGG | + | chr6.3:68398605-68398624 | None:intergenic | 50.0% | |
| CAGCCTCATGCTCAGTTGAT+TGG | + | chr6.3:68402093-68402112 | None:intergenic | 50.0% | |
| CCGAAGTCATGTCCTATGAG+AGG | + | chr6.3:68402224-68402243 | None:intergenic | 50.0% | |
| CGAGTACCTGCAAAACGGAA+TGG | + | chr6.3:68397380-68397399 | None:intergenic | 50.0% | |
| GACTATGACGGTTGCAAGTG+TGG | - | chr6.3:68398885-68398904 | MS.gene022173:intron | 50.0% | |
| TATGACGGTTGCAAGTGTGG+CGG | - | chr6.3:68398888-68398907 | MS.gene022173:intron | 50.0% | |
| TCACAACCTCTCGTAGGACA+TGG | - | chr6.3:68402395-68402414 | MS.gene022173:intron | 50.0% | |
| TCGTCCTCAGTTGGTTGGAT+GGG | + | chr6.3:68402270-68402289 | None:intergenic | 50.0% | |
| ! | CTCAGTTGATTGGTTGGGGT+CGG | + | chr6.3:68402083-68402102 | None:intergenic | 50.0% |
| ! | GAAGATAGTGGTCCCTTGGT+TGG | - | chr6.3:68399598-68399617 | MS.gene022173:intron | 50.0% |
| ! | GATCTGAAAGTGCAACGTCG+CGG | - | chr6.3:68398818-68398837 | MS.gene022173:intron | 50.0% |
| AATCCTTTCCCCTGGACACG+AGG | + | chr6.3:68399694-68399713 | None:intergenic | 55.0% | |
| ACGTTGATGCCGATGCCGAA+AGG | - | chr6.3:68402768-68402787 | MS.gene022173:intron | 55.0% | |
| ATTTCAGCCTCGTCCTCGGT+TGG | + | chr6.3:68402459-68402478 | None:intergenic | 55.0% | |
| CAGAAGCCATGTCCTACGAG+AGG | + | chr6.3:68402404-68402423 | None:intergenic | 55.0% | |
| CAGAAGCCGTGTCCTATGAG+AGG | + | chr6.3:68402042-68402061 | None:intergenic | 55.0% | |
| CATCCAACCAACTGAGGACG+AGG | - | chr6.3:68402269-68402288 | MS.gene022173:intron | 55.0% | |
| CGTCCTCAGTTGGTTGGATG+GGG | + | chr6.3:68402269-68402288 | None:intergenic | 55.0% | |
| CGTGTCCAGGGGAAAGGATT+GGG | - | chr6.3:68399694-68399713 | MS.gene022173:intron | 55.0% | |
| CTCAGTTGGTTGGATGGGGT+CGG | + | chr6.3:68402265-68402284 | None:intergenic | 55.0% | |
| CTCGTCCTCAGTTGGTTGGA+TGG | + | chr6.3:68402271-68402290 | None:intergenic | 55.0% | |
| CTCTCATAGGACACGGCTTC+TGG | - | chr6.3:68402040-68402059 | MS.gene022173:intron | 55.0% | |
| CTCTCGTAGGACATGGCTTC+TGG | - | chr6.3:68402402-68402421 | MS.gene022173:intron | 55.0% | |
| GCTTTCCCAATCCTTTCCCC+TGG | + | chr6.3:68399702-68399721 | None:intergenic | 55.0% | |
| TCGTGTCCAGGGGAAAGGAT+TGG | - | chr6.3:68399693-68399712 | MS.gene022173:intron | 55.0% | |
| ! | CTCGGTTGGTTGGATGGGTT+CGG | + | chr6.3:68402445-68402464 | None:intergenic | 55.0% |
| ! | TCGTCCTCGGTTGGTTGGAT+GGG | + | chr6.3:68402450-68402469 | None:intergenic | 55.0% |
| ! | TGCAGGGGGGTACATACCAT+TGG | + | chr6.3:68400854-68400873 | None:intergenic | 55.0% |
| !! | CATTGGTTCCACGGTGACGT+TGG | + | chr6.3:68397240-68397259 | None:intergenic | 55.0% |
| !! | CTCGTCGTCAGTTGGTTCGT+CGG | + | chr6.3:68402627-68402646 | None:intergenic | 55.0% |
| !! | TCGTCGTCAGTTGGTTCGTC+GGG | + | chr6.3:68402626-68402645 | None:intergenic | 55.0% |
| CAGCCTCGTCCTCAGTTGGT+TGG | + | chr6.3:68402275-68402294 | None:intergenic | 60.0% | |
| CATCCAACCAACCGAGGACG+AGG | - | chr6.3:68402449-68402468 | MS.gene022173:intron | 60.0% | |
| CGAACCCATCCAACCAACCG+AGG | - | chr6.3:68402443-68402462 | MS.gene022173:intron | 60.0% | |
| CGACCCCATCCAACCAACTG+AGG | - | chr6.3:68402263-68402282 | MS.gene022173:intron | 60.0% | |
| CGACGAACCAACTGACGACG+AGG | - | chr6.3:68402625-68402644 | MS.gene022173:intron | 60.0% | |
| ! | CTCGTCCTCGGTTGGTTGGA+TGG | + | chr6.3:68402451-68402470 | None:intergenic | 60.0% |
| ! | GTGCAACGTCGCGGATTGAG+AGG | - | chr6.3:68398827-68398846 | MS.gene022173:intron | 60.0% |
| ! | GTTGATTGGTTGGGGTCGGC+AGG | + | chr6.3:68402079-68402098 | None:intergenic | 60.0% |
| ! | GTTGGTTGGATGGGTTCGGC+AGG | + | chr6.3:68402441-68402460 | None:intergenic | 60.0% |
| !! | CGTCGTCAGTTGGTTCGTCG+GGG | + | chr6.3:68402625-68402644 | None:intergenic | 60.0% |
| ACAGCTCGAGCCTCGTGTCC+AGG | - | chr6.3:68399681-68399700 | MS.gene022173:intron | 65.0% | |
| AGCTCGAGCCTCGTGTCCAG+GGG | - | chr6.3:68399683-68399702 | MS.gene022173:intron | 65.0% | |
| CAGCCTCGTCCTCGGTTGGT+TGG | + | chr6.3:68402455-68402474 | None:intergenic | 65.0% | |
| CAGCTCGAGCCTCGTGTCCA+GGG | - | chr6.3:68399682-68399701 | MS.gene022173:intron | 65.0% | |
| GAGACGCTCCAACGTCACCG+TGG | - | chr6.3:68397229-68397248 | MS.gene022173:CDS | 65.0% | |
| GAGCCTCGTGTCCAGGGGAA+AGG | - | chr6.3:68399688-68399707 | MS.gene022173:intron | 65.0% | |
| GTTGGTTGGATGGGGTCGGC+AGG | + | chr6.3:68402261-68402280 | None:intergenic | 65.0% | |
| !! | GTTGGTTCGTCGGGGTCACC+TGG | + | chr6.3:68402617-68402636 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 68397220 | 68402954 | 68397220 | ID=MS.gene022173 |
| chr6.3 | mRNA | 68397220 | 68402954 | 68397220 | ID=MS.gene022173.t1;Parent=MS.gene022173 |
| chr6.3 | exon | 68402865 | 68402954 | 68402865 | ID=MS.gene022173.t1.exon1;Parent=MS.gene022173.t1 |
| chr6.3 | CDS | 68402865 | 68402954 | 68402865 | ID=cds.MS.gene022173.t1;Parent=MS.gene022173.t1 |
| chr6.3 | exon | 68402679 | 68402781 | 68402679 | ID=MS.gene022173.t1.exon2;Parent=MS.gene022173.t1 |
| chr6.3 | CDS | 68402679 | 68402781 | 68402679 | ID=cds.MS.gene022173.t1;Parent=MS.gene022173.t1 |
| chr6.3 | exon | 68401481 | 68401560 | 68401481 | ID=MS.gene022173.t1.exon3;Parent=MS.gene022173.t1 |
| chr6.3 | CDS | 68401481 | 68401560 | 68401481 | ID=cds.MS.gene022173.t1;Parent=MS.gene022173.t1 |
| chr6.3 | exon | 68400418 | 68400747 | 68400418 | ID=MS.gene022173.t1.exon4;Parent=MS.gene022173.t1 |
| chr6.3 | CDS | 68400418 | 68400747 | 68400418 | ID=cds.MS.gene022173.t1;Parent=MS.gene022173.t1 |
| chr6.3 | exon | 68400093 | 68400169 | 68400093 | ID=MS.gene022173.t1.exon5;Parent=MS.gene022173.t1 |
| chr6.3 | CDS | 68400093 | 68400169 | 68400093 | ID=cds.MS.gene022173.t1;Parent=MS.gene022173.t1 |
| chr6.3 | exon | 68399318 | 68399360 | 68399318 | ID=MS.gene022173.t1.exon6;Parent=MS.gene022173.t1 |
| chr6.3 | CDS | 68399318 | 68399360 | 68399318 | ID=cds.MS.gene022173.t1;Parent=MS.gene022173.t1 |
| chr6.3 | exon | 68399180 | 68399242 | 68399180 | ID=MS.gene022173.t1.exon7;Parent=MS.gene022173.t1 |
| chr6.3 | CDS | 68399180 | 68399242 | 68399180 | ID=cds.MS.gene022173.t1;Parent=MS.gene022173.t1 |
| chr6.3 | exon | 68398054 | 68398125 | 68398054 | ID=MS.gene022173.t1.exon8;Parent=MS.gene022173.t1 |
| chr6.3 | CDS | 68398054 | 68398125 | 68398054 | ID=cds.MS.gene022173.t1;Parent=MS.gene022173.t1 |
| chr6.3 | exon | 68397872 | 68397943 | 68397872 | ID=MS.gene022173.t1.exon9;Parent=MS.gene022173.t1 |
| chr6.3 | CDS | 68397872 | 68397943 | 68397872 | ID=cds.MS.gene022173.t1;Parent=MS.gene022173.t1 |
| chr6.3 | exon | 68397692 | 68397763 | 68397692 | ID=MS.gene022173.t1.exon10;Parent=MS.gene022173.t1 |
| chr6.3 | CDS | 68397692 | 68397763 | 68397692 | ID=cds.MS.gene022173.t1;Parent=MS.gene022173.t1 |
| chr6.3 | exon | 68397516 | 68397587 | 68397516 | ID=MS.gene022173.t1.exon11;Parent=MS.gene022173.t1 |
| chr6.3 | CDS | 68397516 | 68397587 | 68397516 | ID=cds.MS.gene022173.t1;Parent=MS.gene022173.t1 |
| chr6.3 | exon | 68397385 | 68397416 | 68397385 | ID=MS.gene022173.t1.exon12;Parent=MS.gene022173.t1 |
| chr6.3 | CDS | 68397385 | 68397416 | 68397385 | ID=cds.MS.gene022173.t1;Parent=MS.gene022173.t1 |
| chr6.3 | exon | 68397220 | 68397280 | 68397220 | ID=MS.gene022173.t1.exon13;Parent=MS.gene022173.t1 |
| chr6.3 | CDS | 68397220 | 68397280 | 68397220 | ID=cds.MS.gene022173.t1;Parent=MS.gene022173.t1 |
| Gene Sequence |
| Protein sequence |
