AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene022244

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene022244.t1 MTR_3g078770 94.860 642 16 7 1 638 1 629 0.0 1244
MS.gene022244.t1 MTR_5g087790 68.682 645 160 18 2 636 1 613 0.0 836
MS.gene022244.t1 MTR_2g098470 63.399 306 98 4 41 334 27 330 7.26e-130 395
MS.gene022244.t1 MTR_3g087530 63.953 258 82 4 49 301 29 280 3.24e-112 343
MS.gene022244.t1 MTR_6g060600 38.370 503 264 9 26 520 17 481 3.93e-110 346
MS.gene022244.t1 MTR_6g460640 50.160 313 145 4 26 333 17 323 3.55e-107 338
MS.gene022244.t1 MTR_8g091370 60.232 259 97 3 46 301 16 271 1.54e-105 327
MS.gene022244.t1 MTR_3g010790 52.000 250 116 2 106 351 1 250 4.24e-89 286
MS.gene022244.t1 MTR_1g024420 44.660 103 55 1 48 148 6 108 1.77e-26 104
MS.gene022244.t1 MTR_7g095580 42.056 107 44 3 95 189 1 101 5.33e-19 82.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene022244.t1 AT3G20770 57.274 653 236 15 3 637 1 628 0.0 682
MS.gene022244.t1 AT2G27050 58.725 596 181 18 2 572 1 556 0.0 629
MS.gene022244.t1 AT1G73730 62.541 307 93 6 43 334 29 328 2.22e-126 385
MS.gene022244.t1 AT1G73730 62.541 307 93 6 43 334 17 316 2.48e-126 384
MS.gene022244.t1 AT5G21120 46.578 453 187 13 2 436 8 423 2.86e-119 365
MS.gene022244.t1 AT5G21120 46.578 453 187 13 2 436 1 416 3.66e-119 365
MS.gene022244.t1 AT5G21120 46.578 453 187 13 2 436 1 416 3.66e-119 365
MS.gene022244.t1 AT5G65100 44.208 423 191 11 47 432 33 447 2.86e-105 330
MS.gene022244.t1 AT5G10120 57.634 262 108 1 43 301 14 275 4.29e-103 322

Find 209 sgRNAs with CRISPR-Local

Find 240 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTACAAGCTTGCGAATTT+TGG 0.116142 3.3:-66708913 None:intergenic
GGCTCTTCTTCATCTGATTT+TGG 0.161207 3.3:+66709413 MS.gene022244:CDS
ATCTTTCGGTAAACCGATTT+GGG 0.200055 3.3:-66708793 None:intergenic
AATAATTTCCATTTAATGTT+TGG 0.231056 3.3:+66709893 MS.gene022244:CDS
GTGGGGACCCAAACATTAAA+TGG 0.259726 3.3:-66709901 None:intergenic
CCAAGCTGACAATGCAATTC+CGG 0.279173 3.3:+66708587 MS.gene022244:CDS
GATCTTTCGGTAAACCGATT+TGG 0.301097 3.3:-66708794 None:intergenic
CCGATGTGAGCTTGGCTATA+AGG 0.303939 3.3:-66709338 None:intergenic
AATTCAAAGCTTTGAACCTT+TGG 0.308642 3.3:-66709823 None:intergenic
AATGGCTCAGCCGGTTAATA+TGG 0.309330 3.3:+66709505 MS.gene022244:CDS
ATAATTTCCATTTAATGTTT+GGG 0.318681 3.3:+66709894 MS.gene022244:CDS
GGTCACAGGCTTTCCTTTCT+CGG 0.320948 3.3:-66708484 None:intergenic
CATGTGATGATGATTGTTAT+TGG 0.322259 3.3:-66709774 None:intergenic
ACCGGCTGAGCCATTGGTTT+CGG 0.323642 3.3:-66709497 None:intergenic
GGTGCTTCTCAAGCGATTAA+AGG 0.326570 3.3:+66708299 MS.gene022244:CDS
GTCAGCTTGGTACTTGGATA+TGG 0.327342 3.3:-66708574 None:intergenic
CGTTCCTCCACATCAAAATT+CGG 0.328270 3.3:-66709119 None:intergenic
AGGCTCAAGGGTTTGTTTAC+GGG 0.333360 3.3:+66708454 MS.gene022244:CDS
CCAAAATTCGCAAGCTTGTA+AGG 0.334057 3.3:+66708913 MS.gene022244:CDS
CAGATATTTCTTCATCAGTA+TGG 0.343697 3.3:+66709999 MS.gene022244:CDS
AAGGCTCAAGGGTTTGTTTA+CGG 0.347915 3.3:+66708453 MS.gene022244:CDS
GGCGGAGGACCTTGATCTTT+CGG 0.355023 3.3:-66708807 None:intergenic
CCTCCTCCATGGTGGCCTAC+AGG 0.364645 3.3:+66708753 MS.gene022244:CDS
GATGAAGAAGAGCCTCTATA+TGG 0.374646 3.3:-66709404 None:intergenic
AAAGGTCCAGCTGCGACAAA+TGG 0.377442 3.3:-66709047 None:intergenic
TTGATTGACGATTGCAAGCC+AGG 0.380797 3.3:-66708982 None:intergenic
GTCACAGGCTTTCCTTTCTC+GGG 0.386577 3.3:-66708483 None:intergenic
TTCTTCATCAATCCAACATT+GGG 0.399620 3.3:+66709156 MS.gene022244:CDS
GAGGAGGATGTGGAGGGATA+AGG 0.401050 3.3:+66708278 MS.gene022244:CDS
TGCATTGTCAGCTTGGTACT+TGG 0.401725 3.3:-66708580 None:intergenic
CCACCTTCCATCGATATAAC+TGG 0.402818 3.3:+66709530 MS.gene022244:CDS
CATATCTCCCTTGAACTCAT+AGG 0.404451 3.3:-66709939 None:intergenic
AGATCATGAGGTTTCTTGTA+AGG 0.405253 3.3:-66708828 None:intergenic
ATTGCGAAAGTCTGCTGAAA+TGG 0.405530 3.3:-66709209 None:intergenic
TTTCCTCCTTGCCTGTTCCT+GGG 0.410461 3.3:-66708370 None:intergenic
CAAGCTGACAATGCAATTCC+GGG 0.413671 3.3:+66708588 MS.gene022244:CDS
AAGGTCCAGCTGCGACAAAT+GGG 0.416033 3.3:-66709046 None:intergenic
TTTGTCGCAGCTGGACCTTT+CGG 0.419285 3.3:+66709050 MS.gene022244:CDS
TTGCCTCTGCTTGGCCGCAT+CGG 0.422356 3.3:-66708346 None:intergenic
TCGCCTCAGGTTCAGTTAGC+CGG 0.423673 3.3:-66708206 None:intergenic
GATTGATGAAGAAGATTCTC+AGG 0.425025 3.3:-66709146 None:intergenic
CATACTGATGAAGAAATATC+TGG 0.429090 3.3:-66709998 None:intergenic
TCAATCCAACATTGGGATGA+TGG 0.429901 3.3:+66709163 MS.gene022244:CDS
CCGGAATTGCATTGTCAGCT+TGG 0.430474 3.3:-66708587 None:intergenic
GCCGCATCGGATCCTTCCTT+CGG 0.430698 3.3:-66708333 None:intergenic
GATCATGAGATGGCTCTATC+TGG 0.431769 3.3:+66708129 MS.gene022244:CDS
GGCAACATGAATTTAACTTC+TGG 0.433244 3.3:+66709623 MS.gene022244:CDS
CCCTCAGAGGCGGTTTCCAT+TGG 0.434105 3.3:+66708719 MS.gene022244:CDS
ACCTCATTAGCATGAAAACT+TGG 0.436185 3.3:-66709440 None:intergenic
TTCCTGGGATTGCCTCTGCT+TGG 0.439634 3.3:-66708355 None:intergenic
GCAGCTCTTGCAAGGTGTGA+GGG 0.439936 3.3:-66708644 None:intergenic
CCGCGAATGGTGGAAGGATA+AGG 0.449952 3.3:+66708524 MS.gene022244:CDS
GCAGAGGCAATCCCAGGAAC+AGG 0.451574 3.3:+66708359 MS.gene022244:CDS
CTCCTCCATGGTGGCCTACA+GGG 0.453443 3.3:+66708754 MS.gene022244:CDS
CCTTATCCTTCCACCATTCG+CGG 0.453482 3.3:-66708524 None:intergenic
GTGAGGAAGCGGAAGATCTC+TGG 0.455579 3.3:+66709263 MS.gene022244:CDS
TACGGGATCATTCCCGAGAA+AGG 0.459725 3.3:+66708471 MS.gene022244:CDS
GAAGGTGGAACCATATTAAC+CGG 0.463028 3.3:-66709515 None:intergenic
CTTCTTCATCAATCCAACAT+TGG 0.463424 3.3:+66709155 MS.gene022244:CDS
AGCAGCATGAGAATTACTTC+AGG 0.465101 3.3:+66709702 MS.gene022244:CDS
TCAGCAGACTTTCGCAATGA+AGG 0.468808 3.3:+66709214 MS.gene022244:CDS
ATGATTGTTATTGGACATGT+TGG 0.474263 3.3:-66709765 None:intergenic
TGCAGCTCTTGCAAGGTGTG+AGG 0.478278 3.3:-66708645 None:intergenic
GAGAAAGGAAAGCCTGTGAC+CGG 0.478282 3.3:+66708486 MS.gene022244:CDS
ATATTAACCGGCTGAGCCAT+TGG 0.478420 3.3:-66709503 None:intergenic
GTATCCCTAGAAGCCCTGTC+TGG 0.478900 3.3:-66709365 None:intergenic
GTCTATGATTCAGATATTCA+AGG 0.479340 3.3:+66709602 MS.gene022244:CDS
TCACACCTTGCAAGAGCTGC+AGG 0.479872 3.3:+66708647 MS.gene022244:CDS
CGCCTCAGGTTCAGTTAGCC+GGG 0.481589 3.3:-66708205 None:intergenic
GATGGCTCTATCTGGTGATC+TGG 0.482695 3.3:+66708137 MS.gene022244:CDS
TCTTGCAAGGTGTGAGGGGT+TGG 0.482958 3.3:-66708639 None:intergenic
CACATGTTTGCAAGAGATGA+AGG 0.486109 3.3:+66709791 MS.gene022244:CDS
GCTCCCCAACCCCAAGTTGA+GGG 0.486678 3.3:+66708171 MS.gene022244:CDS
TGCTCCCCAACCCCAAGTTG+AGG 0.487998 3.3:+66708170 MS.gene022244:CDS
TCCTTCCCTGTAGGCCACCA+TGG 0.488917 3.3:-66708759 None:intergenic
CTCTGGTGAATTTAACATGA+TGG 0.489439 3.3:+66709280 MS.gene022244:CDS
GAGAATTACTTCAGGGGTCA+AGG 0.490089 3.3:+66709710 MS.gene022244:CDS
CATGCCTTCTTCAGATCATG+AGG 0.490321 3.3:-66708840 None:intergenic
GGCCAAGCAGAGGCAATCCC+AGG 0.494536 3.3:+66708353 MS.gene022244:CDS
TTTCTGAAGATGGTGAGAAA+AGG 0.494881 3.3:+66709561 MS.gene022244:CDS
CCAATGGAAACCGCCTCTGA+GGG 0.495394 3.3:-66708719 None:intergenic
CCGAGCTTGAGAGGAGGATG+TGG 0.496132 3.3:+66708268 MS.gene022244:CDS
AATGGTGGAAGGATAAGGTT+AGG 0.496339 3.3:+66708529 MS.gene022244:CDS
GCAATTCCGGGGAAGAATGA+TGG 0.501691 3.3:+66708600 MS.gene022244:CDS
TTTGACATCCTATGAGTTCA+AGG 0.502925 3.3:+66709931 MS.gene022244:CDS
CGGATAATCTCCGCGAATGG+TGG 0.504192 3.3:+66708514 MS.gene022244:CDS
ACCGAAACCAATGGCTCAGC+CGG 0.505945 3.3:+66709496 MS.gene022244:CDS
TCTTCGTCAACCATCGCCTC+AGG 0.506692 3.3:-66708219 None:intergenic
GGACTTGGAGTTTCTGAAGA+TGG 0.507451 3.3:+66709551 MS.gene022244:CDS
CTGAAGAAGGCATGGAAGGT+TGG 0.507865 3.3:+66708849 MS.gene022244:CDS
TTATCCGATGCCCCGGTCAC+AGG 0.510724 3.3:-66708498 None:intergenic
TCTCTCCATCATCCCAATGT+TGG 0.511441 3.3:-66709168 None:intergenic
AGAAGGGTGTTCCTCCTCCA+TGG 0.516637 3.3:+66708742 MS.gene022244:CDS
ATGGAGGTTTGCAAGGCTCA+AGG 0.517295 3.3:+66708441 MS.gene022244:CDS
GGAAGAGGCTGTGACCAACT+TGG 0.519473 3.3:+66709235 MS.gene022244:CDS
AGGATAAAGCTCCCGCGCTA+AGG 0.520455 3.3:-66709012 None:intergenic
GAGCTGCAGGACACAACCTT+GGG 0.520799 3.3:+66708660 MS.gene022244:CDS
ACTTGGATTTCGTGAGGAAG+CGG 0.521923 3.3:+66709252 MS.gene022244:CDS
CAATTGAGTTGTCCATATAG+AGG 0.522292 3.3:+66709392 MS.gene022244:CDS
AAAGCCTGTGACCGGGGCAT+CGG 0.525234 3.3:+66708494 MS.gene022244:CDS
GGACCTTTCGGCATCAATGA+AGG 0.525234 3.3:+66709062 MS.gene022244:CDS
AGAAAGGAAAGCCTGTGACC+GGG 0.526532 3.3:+66708487 MS.gene022244:CDS
TGTGTCCTGCAGCTCTTGCA+AGG 0.529578 3.3:-66708652 None:intergenic
TGATTGTGATTGTTCTCAAA+GGG 0.531892 3.3:-66709848 None:intergenic
ATCGGTTTACCGAAAGATCA+AGG 0.532949 3.3:+66708798 MS.gene022244:CDS
GAGGCGGTTTCCATTGGAGA+AGG 0.533081 3.3:+66708725 MS.gene022244:CDS
CTGGAAAACCGATGTGAGCT+TGG 0.533885 3.3:-66709346 None:intergenic
GAAGAGTGGTGGCCCCAAAT+CGG 0.536945 3.3:+66708780 MS.gene022244:CDS
CGGCTAAGGAAAGTGCAACC+TGG 0.537233 3.3:+66708964 MS.gene022244:CDS
TCAAGATAAAATGACGGCTA+AGG 0.537615 3.3:+66708950 MS.gene022244:CDS
TGAGGTTTCTTGTAAGGCGG+AGG 0.540347 3.3:-66708822 None:intergenic
GAAGTACATGCTGAAAATGA+TGG 0.543075 3.3:+66708422 MS.gene022244:CDS
GTGTGAGGGGTTGGACCGAT+CGG 0.543206 3.3:-66708630 None:intergenic
GAAAGGAAAGCCTGTGACCG+GGG 0.544653 3.3:+66708488 MS.gene022244:CDS
GACTTTCGCAATGAAGGAAG+AGG 0.546905 3.3:+66709220 MS.gene022244:CDS
TTGCCTCCATCATTCTTCCC+CGG 0.547718 3.3:-66708606 None:intergenic
CTCATGATCTGAAGAAGGCA+TGG 0.547916 3.3:+66708841 MS.gene022244:CDS
TTGATGTTGCCGAGCTTGAG+AGG 0.548157 3.3:+66708259 MS.gene022244:CDS
GCAATGAGTATGATGTCGAT+GGG 0.548446 3.3:+66709084 MS.gene022244:CDS
GAAACCTCATGATCTGAAGA+AGG 0.550430 3.3:+66708836 MS.gene022244:CDS
TGGTACTTGGATATGGCAGC+AGG 0.551180 3.3:-66708567 None:intergenic
AGAGCTGCAGGACACAACCT+TGG 0.551353 3.3:+66708659 MS.gene022244:CDS
GCAGCATGAGAATTACTTCA+GGG 0.554925 3.3:+66709703 MS.gene022244:CDS
TAATCTCCGCGAATGGTGGA+AGG 0.556888 3.3:+66708518 MS.gene022244:CDS
CACCACTCTTCCTTCCCTGT+AGG 0.558000 3.3:-66708768 None:intergenic
GTGATTGTGATTGTTCTCAA+AGG 0.561089 3.3:-66709849 None:intergenic
AGCTTGAGAGGAGGATGTGG+AGG 0.561978 3.3:+66708271 MS.gene022244:CDS
TGCAGATAAGAGAGAACCCA+AGG 0.562468 3.3:-66708676 None:intergenic
TCCAAGTCCAGTTATATCGA+TGG 0.562663 3.3:-66709537 None:intergenic
CCTGTAGGCCACCATGGAGG+AGG 0.564770 3.3:-66708753 None:intergenic
GGCAATCCCAGGAACAGGCA+AGG 0.565695 3.3:+66708364 MS.gene022244:CDS
TCCAATGGAAACCGCCTCTG+AGG 0.567003 3.3:-66708720 None:intergenic
CAGCTCTTGCAAGGTGTGAG+GGG 0.568677 3.3:-66708643 None:intergenic
TGGAGGTTTGCAAGGCTCAA+GGG 0.571141 3.3:+66708442 MS.gene022244:CDS
TGATCTGAAGAAGGCATGGA+AGG 0.572466 3.3:+66708845 MS.gene022244:CDS
TATGCATGGAGTAGGCATCA+TGG 0.573987 3.3:+66709958 MS.gene022244:CDS
ATGAAGGTCAATTTGACCAA+AGG 0.575029 3.3:+66709807 MS.gene022244:CDS
GGCCTACAGGGAAGGAAGAG+TGG 0.575468 3.3:+66708766 MS.gene022244:CDS
TCCATCGATATAACTGGACT+TGG 0.575840 3.3:+66709536 MS.gene022244:CDS
GGTCCAGCTGCGACAAATGG+GGG 0.576693 3.3:-66709044 None:intergenic
AAGGGAGATATGCATGGAGT+AGG 0.577953 3.3:+66709950 MS.gene022244:CDS
TTACTTCAGGGGTCAAGGAA+TGG 0.577986 3.3:+66709715 MS.gene022244:CDS
GATCCGATGCGGCCAAGCAG+AGG 0.578212 3.3:+66708343 MS.gene022244:CDS
GGAGGAACACCCTTCTCCAA+TGG 0.579400 3.3:-66708735 None:intergenic
AGGTCCAGCTGCGACAAATG+GGG 0.579864 3.3:-66709045 None:intergenic
GCTAACTGAACCTGAGGCGA+TGG 0.580269 3.3:+66708209 MS.gene022244:CDS
AGGATGTCAAATCACAATGT+GGG 0.580845 3.3:-66709919 None:intergenic
CTCCCCAACCCCAAGTTGAG+GGG 0.581721 3.3:+66708172 MS.gene022244:CDS
CTTCCTCACGAAATCCAAGT+TGG 0.583208 3.3:-66709249 None:intergenic
TGCTGAATGCTGCTAGCTTG+CGG 0.585537 3.3:-66709680 None:intergenic
AATGGAAACCGCCTCTGAGG+GGG 0.586396 3.3:-66708717 None:intergenic
GAGTTCAAGGGAGATATGCA+TGG 0.587678 3.3:+66709944 MS.gene022244:CDS
TCAAGAGGAGGCCTTAGCGC+GGG 0.589414 3.3:+66709001 MS.gene022244:CDS
TCCATGGTGGCCTACAGGGA+AGG 0.589968 3.3:+66708758 MS.gene022244:CDS
TTGACATCCTATGAGTTCAA+GGG 0.590024 3.3:+66709932 MS.gene022244:CDS
GAAAATGATGGAGGTTTGCA+AGG 0.591397 3.3:+66708434 MS.gene022244:CDS
AAGATGTCAAGGGCTCAAGA+TGG 0.596334 3.3:+66708393 MS.gene022244:CDS
GGTCAAGGAATGGTGATGGA+AGG 0.597963 3.3:+66709725 MS.gene022244:CDS
CAGGGGTCAAGGAATGGTGA+TGG 0.599899 3.3:+66709721 MS.gene022244:CDS
TTGCCTTCATTGATGCCGAA+AGG 0.600278 3.3:-66709065 None:intergenic
GAAGATGGTGAGAAAAGGAT+TGG 0.601828 3.3:+66709566 MS.gene022244:CDS
GAGCAAGTCAAACCGAAGGA+AGG 0.602432 3.3:+66708321 MS.gene022244:CDS
AAGGTTAGGTTTGACCGCAA+CGG 0.602662 3.3:+66708543 MS.gene022244:CDS
AATGACTGAGGATATATGAC+TGG 0.604420 3.3:-66709467 None:intergenic
CCAGTTATATCGATGGAAGG+TGG 0.610149 3.3:-66709530 None:intergenic
TCCCCAACCCCAAGTTGAGG+GGG 0.613156 3.3:+66708173 MS.gene022244:CDS
CGCCCGGCTAACTGAACCTG+AGG 0.614118 3.3:+66708203 MS.gene022244:CDS
CCACATCCTCCTCTCAAGCT+CGG 0.615219 3.3:-66708268 None:intergenic
GGCAATGAGTATGATGTCGA+TGG 0.618237 3.3:+66709083 MS.gene022244:CDS
AGGCGGTTTCCATTGGAGAA+GGG 0.619284 3.3:+66708726 MS.gene022244:CDS
CATCGGATAATCTCCGCGAA+TGG 0.620613 3.3:+66708511 MS.gene022244:CDS
TCTTTCGGTAAACCGATTTG+GGG 0.621358 3.3:-66708792 None:intergenic
GCGGAGATTATCCGATGCCC+CGG 0.628966 3.3:-66708505 None:intergenic
TAGGATGTCAAATCACAATG+TGG 0.629786 3.3:-66709920 None:intergenic
TCATGAGGTTTCTTGTAAGG+CGG 0.630329 3.3:-66708825 None:intergenic
GATGATGTTTGATCATGAGA+TGG 0.631968 3.3:+66708119 MS.gene022244:CDS
AATGATGGAGGCAATCCGAT+CGG 0.634526 3.3:+66708615 MS.gene022244:CDS
GCTTGCAATCGTCAATCAAG+AGG 0.634856 3.3:+66708986 MS.gene022244:CDS
ATCAAGAGGAGGCCTTAGCG+CGG 0.637665 3.3:+66709000 MS.gene022244:CDS
GCTTGAGAGGAGGATGTGGA+GGG 0.637705 3.3:+66708272 MS.gene022244:CDS
TGACCAACTTGGATTTCGTG+AGG 0.639847 3.3:+66709246 MS.gene022244:CDS
TGCAATCGTCAATCAAGAGG+AGG 0.640235 3.3:+66708989 MS.gene022244:CDS
CCTTATAGCCAAGCTCACAT+CGG 0.641231 3.3:+66709338 MS.gene022244:CDS
ATTCGTTCAACCGAAACCAA+TGG 0.641894 3.3:+66709487 MS.gene022244:CDS
AGTCCAGTTATATCGATGGA+AGG 0.642356 3.3:-66709533 None:intergenic
ATGCCTTCAAGATAAAATGA+CGG 0.643938 3.3:+66708944 MS.gene022244:CDS
GGATGTCAAATCACAATGTG+GGG 0.645049 3.3:-66709918 None:intergenic
AAAGGAGCAAGTCAAACCGA+AGG 0.648111 3.3:+66708317 MS.gene022244:CDS
GATGGTGAGAAAAGGATTGG+TGG 0.649012 3.3:+66709569 MS.gene022244:CDS
ATATGGCAGCAGGACCGTTG+CGG 0.650469 3.3:-66708557 None:intergenic
TATAAGGACATGTTGAGTGT+TGG 0.651109 3.3:-66709322 None:intergenic
AGGGTGTTCCTCCTCCATGG+TGG 0.653236 3.3:+66708745 MS.gene022244:CDS
TTCGGTTGAACGAATGACTG+AGG 0.658942 3.3:-66709479 None:intergenic
CAATGGAAACCGCCTCTGAG+GGG 0.659298 3.3:-66708718 None:intergenic
GTCCAGCTGCGACAAATGGG+GGG 0.662952 3.3:-66709043 None:intergenic
CTACAGGGAAGGAAGAGTGG+TGG 0.665816 3.3:+66708769 MS.gene022244:CDS
CAATGAGTATGATGTCGATG+GGG 0.670997 3.3:+66709085 MS.gene022244:CDS
AATGAGTATGATGTCGATGG+GGG 0.671000 3.3:+66709086 MS.gene022244:CDS
AATCCCAGGAACAGGCAAGG+AGG 0.672658 3.3:+66708367 MS.gene022244:CDS
TTCCCTGTAGGCCACCATGG+AGG 0.673523 3.3:-66708756 None:intergenic
ATGTTGCCGAGCTTGAGAGG+AGG 0.673867 3.3:+66708262 MS.gene022244:CDS
ATTCCGGGGAAGAATGATGG+AGG 0.679869 3.3:+66708603 MS.gene022244:CDS
AAGCTGACAATGCAATTCCG+GGG 0.692590 3.3:+66708589 MS.gene022244:CDS
CTGAATCATAGACAGTCATG+AGG 0.695799 3.3:-66709592 None:intergenic
CAGCATGAGAATTACTTCAG+GGG 0.700026 3.3:+66709704 MS.gene022244:CDS
CTCAGGTTCAGTTAGCCGGG+CGG 0.704152 3.3:-66708202 None:intergenic
TGGCAGCCACTTAACCGCAG+CGG 0.706818 3.3:+66709643 MS.gene022244:CDS
ACCGAAGGAAGGATCCGATG+CGG 0.718950 3.3:+66708332 MS.gene022244:CDS
GTACATGCTGAAAATGATGG+AGG 0.724912 3.3:+66708425 MS.gene022244:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATTTCCATTTAATGTT+TGG + chr3.3:66709893-66709912 MS.gene022244:CDS 15.0%
!! ATAATTTCCATTTAATGTTT+GGG + chr3.3:66709894-66709913 MS.gene022244:CDS 15.0%
ATGCCTTCAAGATAAAATGA+CGG + chr3.3:66708944-66708963 MS.gene022244:CDS 30.0%
CAGATATTTCTTCATCAGTA+TGG + chr3.3:66709999-66710018 MS.gene022244:CDS 30.0%
CATACTGATGAAGAAATATC+TGG - chr3.3:66710001-66710020 None:intergenic 30.0%
GTCTATGATTCAGATATTCA+AGG + chr3.3:66709602-66709621 MS.gene022244:CDS 30.0%
TGATTGTGATTGTTCTCAAA+GGG - chr3.3:66709851-66709870 None:intergenic 30.0%
TTCTTCATCAATCCAACATT+GGG + chr3.3:66709156-66709175 MS.gene022244:CDS 30.0%
! ATGATTGTTATTGGACATGT+TGG - chr3.3:66709768-66709787 None:intergenic 30.0%
! CATGTGATGATGATTGTTAT+TGG - chr3.3:66709777-66709796 None:intergenic 30.0%
! TGTTGGCAAGTGAAAATTTT+AGG - chr3.3:66709308-66709327 None:intergenic 30.0%
!! AATTCAAAGCTTTGAACCTT+TGG - chr3.3:66709826-66709845 None:intergenic 30.0%
!!! CATTTTATCTTGAAGGCATT+TGG - chr3.3:66708943-66708962 None:intergenic 30.0%
AAGGAGGAAAAAGATGTCAA+GGG + chr3.3:66708383-66708402 MS.gene022244:CDS 35.0%
AATGACTGAGGATATATGAC+TGG - chr3.3:66709470-66709489 None:intergenic 35.0%
ACCTCATTAGCATGAAAACT+TGG - chr3.3:66709443-66709462 None:intergenic 35.0%
AGATCATGAGGTTTCTTGTA+AGG - chr3.3:66708831-66708850 None:intergenic 35.0%
AGGATGTCAAATCACAATGT+GGG - chr3.3:66709922-66709941 None:intergenic 35.0%
ATGAAGGTCAATTTGACCAA+AGG + chr3.3:66709807-66709826 MS.gene022244:CDS 35.0%
CTCTGGTGAATTTAACATGA+TGG + chr3.3:66709280-66709299 MS.gene022244:CDS 35.0%
CTTCTTCATCAATCCAACAT+TGG + chr3.3:66709155-66709174 MS.gene022244:CDS 35.0%
GAAGTACATGCTGAAAATGA+TGG + chr3.3:66708422-66708441 MS.gene022244:CDS 35.0%
GATGATGTTTGATCATGAGA+TGG + chr3.3:66708119-66708138 MS.gene022244:CDS 35.0%
GATTGATGAAGAAGATTCTC+AGG - chr3.3:66709149-66709168 None:intergenic 35.0%
GTGATTGTGATTGTTCTCAA+AGG - chr3.3:66709852-66709871 None:intergenic 35.0%
TAGGATGTCAAATCACAATG+TGG - chr3.3:66709923-66709942 None:intergenic 35.0%
TATAAGGACATGTTGAGTGT+TGG - chr3.3:66709325-66709344 None:intergenic 35.0%
TCAAGATAAAATGACGGCTA+AGG + chr3.3:66708950-66708969 MS.gene022244:CDS 35.0%
TTGACATCCTATGAGTTCAA+GGG + chr3.3:66709932-66709951 MS.gene022244:CDS 35.0%
TTTGACATCCTATGAGTTCA+AGG + chr3.3:66709931-66709950 MS.gene022244:CDS 35.0%
! ATCTTTCGGTAAACCGATTT+GGG - chr3.3:66708796-66708815 None:intergenic 35.0%
! CAATTGAGTTGTCCATATAG+AGG + chr3.3:66709392-66709411 MS.gene022244:CDS 35.0%
! GGCAACATGAATTTAACTTC+TGG + chr3.3:66709623-66709642 MS.gene022244:CDS 35.0%
! TCCAAGTTTTCATGCTAATG+AGG + chr3.3:66709439-66709458 MS.gene022244:CDS 35.0%
! TCTTCTTCATCTGATTTTGG+TGG + chr3.3:66709416-66709435 MS.gene022244:CDS 35.0%
! TTTCTGAAGATGGTGAGAAA+AGG + chr3.3:66709561-66709580 MS.gene022244:CDS 35.0%
!! TAGCCGTCATTTTATCTTGA+AGG - chr3.3:66708950-66708969 None:intergenic 35.0%
AATGAGTATGATGTCGATGG+GGG + chr3.3:66709086-66709105 MS.gene022244:CDS 40.0%
ACAAATGGGGGGATATAATC+AGG - chr3.3:66709035-66709054 None:intergenic 40.0%
AGCAGCATGAGAATTACTTC+AGG + chr3.3:66709702-66709721 MS.gene022244:CDS 40.0%
AGTCCAGTTATATCGATGGA+AGG - chr3.3:66709536-66709555 None:intergenic 40.0%
ATTCGTTCAACCGAAACCAA+TGG + chr3.3:66709487-66709506 MS.gene022244:CDS 40.0%
ATTGCGAAAGTCTGCTGAAA+TGG - chr3.3:66709212-66709231 None:intergenic 40.0%
CAAGGAGGAAAAAGATGTCA+AGG + chr3.3:66708382-66708401 MS.gene022244:CDS 40.0%
CAATGAGTATGATGTCGATG+GGG + chr3.3:66709085-66709104 MS.gene022244:CDS 40.0%
CACATGTTTGCAAGAGATGA+AGG + chr3.3:66709791-66709810 MS.gene022244:CDS 40.0%
CAGCATGAGAATTACTTCAG+GGG + chr3.3:66709704-66709723 MS.gene022244:CDS 40.0%
CATATCTCCCTTGAACTCAT+AGG - chr3.3:66709942-66709961 None:intergenic 40.0%
CCAAAATTCGCAAGCTTGTA+AGG + chr3.3:66708913-66708932 MS.gene022244:CDS 40.0%
CGTTCCTCCACATCAAAATT+CGG - chr3.3:66709122-66709141 None:intergenic 40.0%
CTGAATCATAGACAGTCATG+AGG - chr3.3:66709595-66709614 None:intergenic 40.0%
GAAACCTCATGATCTGAAGA+AGG + chr3.3:66708836-66708855 MS.gene022244:CDS 40.0%
GAAGATGGTGAGAAAAGGAT+TGG + chr3.3:66709566-66709585 MS.gene022244:CDS 40.0%
GAAGGTGGAACCATATTAAC+CGG - chr3.3:66709518-66709537 None:intergenic 40.0%
GATCTTTCGGTAAACCGATT+TGG - chr3.3:66708797-66708816 None:intergenic 40.0%
GATGAAGAAGAGCCTCTATA+TGG - chr3.3:66709407-66709426 None:intergenic 40.0%
GCAATGAGTATGATGTCGAT+GGG + chr3.3:66709084-66709103 MS.gene022244:CDS 40.0%
GCAGCATGAGAATTACTTCA+GGG + chr3.3:66709703-66709722 MS.gene022244:CDS 40.0%
GGATGTCAAATCACAATGTG+GGG - chr3.3:66709921-66709940 None:intergenic 40.0%
GTACATGCTGAAAATGATGG+AGG + chr3.3:66708425-66708444 MS.gene022244:CDS 40.0%
TCAATCCAACATTGGGATGA+TGG + chr3.3:66709163-66709182 MS.gene022244:CDS 40.0%
TCATGAGGTTTCTTGTAAGG+CGG - chr3.3:66708828-66708847 None:intergenic 40.0%
TCCAAGTCCAGTTATATCGA+TGG - chr3.3:66709540-66709559 None:intergenic 40.0%
TCCATCGATATAACTGGACT+TGG + chr3.3:66709536-66709555 MS.gene022244:CDS 40.0%
! AAGGCTCAAGGGTTTGTTTA+CGG + chr3.3:66708453-66708472 MS.gene022244:CDS 40.0%
! AATGGTGGAAGGATAAGGTT+AGG + chr3.3:66708529-66708548 MS.gene022244:CDS 40.0%
! ATCGGTTTACCGAAAGATCA+AGG + chr3.3:66708798-66708817 MS.gene022244:CDS 40.0%
! CCTTACAAGCTTGCGAATTT+TGG - chr3.3:66708916-66708935 None:intergenic 40.0%
! GAAAATGATGGAGGTTTGCA+AGG + chr3.3:66708434-66708453 MS.gene022244:CDS 40.0%
! GGCTCTTCTTCATCTGATTT+TGG + chr3.3:66709413-66709432 MS.gene022244:CDS 40.0%
!! CGAATTTTGATGTGGAGGAA+CGG + chr3.3:66709120-66709139 MS.gene022244:CDS 40.0%
!! CTTGCGAATTTTGGCAATGT+CGG - chr3.3:66708907-66708926 None:intergenic 40.0%
!! TCTTTCGGTAAACCGATTTG+GGG - chr3.3:66708795-66708814 None:intergenic 40.0%
!! TTGCGAATTTTGGCAATGTC+GGG - chr3.3:66708906-66708925 None:intergenic 40.0%
AAAGGAGCAAGTCAAACCGA+AGG + chr3.3:66708317-66708336 MS.gene022244:CDS 45.0%
AAGATGTCAAGGGCTCAAGA+TGG + chr3.3:66708393-66708412 MS.gene022244:CDS 45.0%
AAGCTGACAATGCAATTCCG+GGG + chr3.3:66708589-66708608 MS.gene022244:CDS 45.0%
AAGGGAGATATGCATGGAGT+AGG + chr3.3:66709950-66709969 MS.gene022244:CDS 45.0%
AAGGTTAGGTTTGACCGCAA+CGG + chr3.3:66708543-66708562 MS.gene022244:CDS 45.0%
AATGGCTCAGCCGGTTAATA+TGG + chr3.3:66709505-66709524 MS.gene022244:CDS 45.0%
ACTTGGATTTCGTGAGGAAG+CGG + chr3.3:66709252-66709271 MS.gene022244:CDS 45.0%
ATATTAACCGGCTGAGCCAT+TGG - chr3.3:66709506-66709525 None:intergenic 45.0%
CAAGCTGACAATGCAATTCC+GGG + chr3.3:66708588-66708607 MS.gene022244:CDS 45.0%
CATGCCTTCTTCAGATCATG+AGG - chr3.3:66708843-66708862 None:intergenic 45.0%
CCAAGCTGACAATGCAATTC+CGG + chr3.3:66708587-66708606 MS.gene022244:CDS 45.0%
CCACCTTCCATCGATATAAC+TGG + chr3.3:66709530-66709549 MS.gene022244:CDS 45.0%
CCAGTTATATCGATGGAAGG+TGG - chr3.3:66709533-66709552 None:intergenic 45.0%
CCTTATAGCCAAGCTCACAT+CGG + chr3.3:66709338-66709357 MS.gene022244:CDS 45.0%
CTCATGATCTGAAGAAGGCA+TGG + chr3.3:66708841-66708860 MS.gene022244:CDS 45.0%
CTTCCTCACGAAATCCAAGT+TGG - chr3.3:66709252-66709271 None:intergenic 45.0%
GACTTTCGCAATGAAGGAAG+AGG + chr3.3:66709220-66709239 MS.gene022244:CDS 45.0%
GAGAATTACTTCAGGGGTCA+AGG + chr3.3:66709710-66709729 MS.gene022244:CDS 45.0%
GAGTTCAAGGGAGATATGCA+TGG + chr3.3:66709944-66709963 MS.gene022244:CDS 45.0%
GATGGTGAGAAAAGGATTGG+TGG + chr3.3:66709569-66709588 MS.gene022244:CDS 45.0%
GCTTGCAATCGTCAATCAAG+AGG + chr3.3:66708986-66709005 MS.gene022244:CDS 45.0%
GGCAATGAGTATGATGTCGA+TGG + chr3.3:66709083-66709102 MS.gene022244:CDS 45.0%
GGTAATATCCCCCTCAACTT+GGG - chr3.3:66708184-66708203 None:intergenic 45.0%
GGTGCTTCTCAAGCGATTAA+AGG + chr3.3:66708299-66708318 MS.gene022244:CDS 45.0%
GTAATATCCCCCTCAACTTG+GGG - chr3.3:66708183-66708202 None:intergenic 45.0%
GTCAGCTTGGTACTTGGATA+TGG - chr3.3:66708577-66708596 None:intergenic 45.0%
GTGGGGACCCAAACATTAAA+TGG - chr3.3:66709904-66709923 None:intergenic 45.0%
TATGCATGGAGTAGGCATCA+TGG + chr3.3:66709958-66709977 MS.gene022244:CDS 45.0%
TCAGCAGACTTTCGCAATGA+AGG + chr3.3:66709214-66709233 MS.gene022244:CDS 45.0%
TCTCTCCATCATCCCAATGT+TGG - chr3.3:66709171-66709190 None:intergenic 45.0%
TGACCAACTTGGATTTCGTG+AGG + chr3.3:66709246-66709265 MS.gene022244:CDS 45.0%
TGCAATCGTCAATCAAGAGG+AGG + chr3.3:66708989-66709008 MS.gene022244:CDS 45.0%
TGCAGATAAGAGAGAACCCA+AGG - chr3.3:66708679-66708698 None:intergenic 45.0%
TGCATTGTCAGCTTGGTACT+TGG - chr3.3:66708583-66708602 None:intergenic 45.0%
TTACTTCAGGGGTCAAGGAA+TGG + chr3.3:66709715-66709734 MS.gene022244:CDS 45.0%
TTCGGTTGAACGAATGACTG+AGG - chr3.3:66709482-66709501 None:intergenic 45.0%
TTGATTGACGATTGCAAGCC+AGG - chr3.3:66708985-66709004 None:intergenic 45.0%
TTGCCTTCATTGATGCCGAA+AGG - chr3.3:66709068-66709087 None:intergenic 45.0%
! AATGATGGAGGCAATCCGAT+CGG + chr3.3:66708615-66708634 MS.gene022244:CDS 45.0%
! AGGCTCAAGGGTTTGTTTAC+GGG + chr3.3:66708454-66708473 MS.gene022244:CDS 45.0%
! CAAGATGTGATTTTCCGCTG+CGG - chr3.3:66709660-66709679 None:intergenic 45.0%
! GATCATGAGATGGCTCTATC+TGG + chr3.3:66708129-66708148 MS.gene022244:CDS 45.0%
! GGACTTGGAGTTTCTGAAGA+TGG + chr3.3:66709551-66709570 MS.gene022244:CDS 45.0%
! TGATCTGAAGAAGGCATGGA+AGG + chr3.3:66708845-66708864 MS.gene022244:CDS 45.0%
! TTTTCCAGACAGGGCTTCTA+GGG + chr3.3:66709361-66709380 MS.gene022244:CDS 45.0%
!! AGAGGAGCCGAATTTTGATG+TGG + chr3.3:66709112-66709131 MS.gene022244:CDS 45.0%
!!! TCACATCGGTTTTCCAGACA+GGG + chr3.3:66709352-66709371 MS.gene022244:CDS 45.0%
AAAGGTCCAGCTGCGACAAA+TGG - chr3.3:66709050-66709069 None:intergenic 50.0%
AAGGTCCAGCTGCGACAAAT+GGG - chr3.3:66709049-66709068 None:intergenic 50.0%
AGAAAGGAAAGCCTGTGACC+GGG + chr3.3:66708487-66708506 MS.gene022244:CDS 50.0%
AGGCGGTTTCCATTGGAGAA+GGG + chr3.3:66708726-66708745 MS.gene022244:CDS 50.0%
ATGGAGGTTTGCAAGGCTCA+AGG + chr3.3:66708441-66708460 MS.gene022244:CDS 50.0%
ATTCCGGGGAAGAATGATGG+AGG + chr3.3:66708603-66708622 MS.gene022244:CDS 50.0%
CATCGGATAATCTCCGCGAA+TGG + chr3.3:66708511-66708530 MS.gene022244:CDS 50.0%
CCGATGTGAGCTTGGCTATA+AGG - chr3.3:66709341-66709360 None:intergenic 50.0%
CCGGAATTGCATTGTCAGCT+TGG - chr3.3:66708590-66708609 None:intergenic 50.0%
CCTTATCCTTCCACCATTCG+CGG - chr3.3:66708527-66708546 None:intergenic 50.0%
CGGTAATATCCCCCTCAACT+TGG - chr3.3:66708185-66708204 None:intergenic 50.0%
CTGGAAAACCGATGTGAGCT+TGG - chr3.3:66709349-66709368 None:intergenic 50.0%
GAGAAAGGAAAGCCTGTGAC+CGG + chr3.3:66708486-66708505 MS.gene022244:CDS 50.0%
GAGCAAGTCAAACCGAAGGA+AGG + chr3.3:66708321-66708340 MS.gene022244:CDS 50.0%
GCAATTCCGGGGAAGAATGA+TGG + chr3.3:66708600-66708619 MS.gene022244:CDS 50.0%
GGACCTTTCGGCATCAATGA+AGG + chr3.3:66709062-66709081 MS.gene022244:CDS 50.0%
GGTCACAGGCTTTCCTTTCT+CGG - chr3.3:66708487-66708506 None:intergenic 50.0%
GTCACAGGCTTTCCTTTCTC+GGG - chr3.3:66708486-66708505 None:intergenic 50.0%
TACGGGATCATTCCCGAGAA+AGG + chr3.3:66708471-66708490 MS.gene022244:CDS 50.0%
TGAGGTTTCTTGTAAGGCGG+AGG - chr3.3:66708825-66708844 None:intergenic 50.0%
TGGAGGTTTGCAAGGCTCAA+GGG + chr3.3:66708442-66708461 MS.gene022244:CDS 50.0%
TGGTACTTGGATATGGCAGC+AGG - chr3.3:66708570-66708589 None:intergenic 50.0%
TTGATGTTGCCGAGCTTGAG+AGG + chr3.3:66708259-66708278 MS.gene022244:CDS 50.0%
TTGCCTCCATCATTCTTCCC+CGG - chr3.3:66708609-66708628 None:intergenic 50.0%
TTTCCTCCTTGCCTGTTCCT+GGG - chr3.3:66708373-66708392 None:intergenic 50.0%
TTTGTCGCAGCTGGACCTTT+CGG + chr3.3:66709050-66709069 MS.gene022244:CDS 50.0%
! CTGAAGAAGGCATGGAAGGT+TGG + chr3.3:66708849-66708868 MS.gene022244:CDS 50.0%
! GATGGCTCTATCTGGTGATC+TGG + chr3.3:66708137-66708156 MS.gene022244:CDS 50.0%
! GATTTTCCGCTGCGGTTAAG+TGG - chr3.3:66709652-66709671 None:intergenic 50.0%
! GTTTTCCAGACAGGGCTTCT+AGG + chr3.3:66709360-66709379 MS.gene022244:CDS 50.0%
! TAATCTCCGCGAATGGTGGA+AGG + chr3.3:66708518-66708537 MS.gene022244:CDS 50.0%
! TGCTGAATGCTGCTAGCTTG+CGG - chr3.3:66709683-66709702 None:intergenic 50.0%
! TTTTCCTCCTTGCCTGTTCC+TGG - chr3.3:66708374-66708393 None:intergenic 50.0%
!! GGAGCCGAATTTTGATGTGG+AGG + chr3.3:66709115-66709134 MS.gene022244:CDS 50.0%
!! GGTCAAGGAATGGTGATGGA+AGG + chr3.3:66709725-66709744 MS.gene022244:CDS 50.0%
!!! CTCACATCGGTTTTCCAGAC+AGG + chr3.3:66709351-66709370 MS.gene022244:CDS 50.0%
AACACTGTGATCCCCCTCAG+AGG + chr3.3:66708706-66708725 MS.gene022244:CDS 55.0%
AATCCCAGGAACAGGCAAGG+AGG + chr3.3:66708367-66708386 MS.gene022244:CDS 55.0%
ACCGAAACCAATGGCTCAGC+CGG + chr3.3:66709496-66709515 MS.gene022244:CDS 55.0%
ACCGAAGGAAGGATCCGATG+CGG + chr3.3:66708332-66708351 MS.gene022244:CDS 55.0%
AGAGCTGCAGGACACAACCT+TGG + chr3.3:66708659-66708678 MS.gene022244:CDS 55.0%
AGCTTGAGAGGAGGATGTGG+AGG + chr3.3:66708271-66708290 MS.gene022244:CDS 55.0%
AGGATAAAGCTCCCGCGCTA+AGG - chr3.3:66709015-66709034 None:intergenic 55.0%
AGGTCCAGCTGCGACAAATG+GGG - chr3.3:66709048-66709067 None:intergenic 55.0%
ATATGGCAGCAGGACCGTTG+CGG - chr3.3:66708560-66708579 None:intergenic 55.0%
ATCAAGAGGAGGCCTTAGCG+CGG + chr3.3:66709000-66709019 MS.gene022244:CDS 55.0%
ATCCCCCTCAACTTGGGGTT+GGG - chr3.3:66708178-66708197 None:intergenic 55.0%
ATGTTGCCGAGCTTGAGAGG+AGG + chr3.3:66708262-66708281 MS.gene022244:CDS 55.0%
CAATGGAAACCGCCTCTGAG+GGG - chr3.3:66708721-66708740 None:intergenic 55.0%
CACCACTCTTCCTTCCCTGT+AGG - chr3.3:66708771-66708790 None:intergenic 55.0%
CAGCTCTTGCAAGGTGTGAG+GGG - chr3.3:66708646-66708665 None:intergenic 55.0%
CAGGGGTCAAGGAATGGTGA+TGG + chr3.3:66709721-66709740 MS.gene022244:CDS 55.0%
CCAATGGAAACCGCCTCTGA+GGG - chr3.3:66708722-66708741 None:intergenic 55.0%
CCACATCCTCCTCTCAAGCT+CGG - chr3.3:66708271-66708290 None:intergenic 55.0%
CGGATAATCTCCGCGAATGG+TGG + chr3.3:66708514-66708533 MS.gene022244:CDS 55.0%
CTACAGGGAAGGAAGAGTGG+TGG + chr3.3:66708769-66708788 MS.gene022244:CDS 55.0%
GAAAGGAAAGCCTGTGACCG+GGG + chr3.3:66708488-66708507 MS.gene022244:CDS 55.0%
GAAGAGTGGTGGCCCCAAAT+CGG + chr3.3:66708780-66708799 MS.gene022244:CDS 55.0%
GAGCTGCAGGACACAACCTT+GGG + chr3.3:66708660-66708679 MS.gene022244:CDS 55.0%
GAGGAGGATGTGGAGGGATA+AGG + chr3.3:66708278-66708297 MS.gene022244:CDS 55.0%
GAGGCGGTTTCCATTGGAGA+AGG + chr3.3:66708725-66708744 MS.gene022244:CDS 55.0%
GCAGCTCTTGCAAGGTGTGA+GGG - chr3.3:66708647-66708666 None:intergenic 55.0%
GCTAACTGAACCTGAGGCGA+TGG + chr3.3:66708209-66708228 MS.gene022244:CDS 55.0%
GCTTGAGAGGAGGATGTGGA+GGG + chr3.3:66708272-66708291 MS.gene022244:CDS 55.0%
GGAAGAGGCTGTGACCAACT+TGG + chr3.3:66709235-66709254 MS.gene022244:CDS 55.0%
GGAGGAACACCCTTCTCCAA+TGG - chr3.3:66708738-66708757 None:intergenic 55.0%
GGCGGAGGACCTTGATCTTT+CGG - chr3.3:66708810-66708829 None:intergenic 55.0%
GTATCCCTAGAAGCCCTGTC+TGG - chr3.3:66709368-66709387 None:intergenic 55.0%
GTGAGGAAGCGGAAGATCTC+TGG + chr3.3:66709263-66709282 MS.gene022244:CDS 55.0%
TATCCCCCTCAACTTGGGGT+TGG - chr3.3:66708179-66708198 None:intergenic 55.0%
TCACACCTTGCAAGAGCTGC+AGG + chr3.3:66708647-66708666 MS.gene022244:CDS 55.0%
TCCAATGGAAACCGCCTCTG+AGG - chr3.3:66708723-66708742 None:intergenic 55.0%
TCGCCTCAGGTTCAGTTAGC+CGG - chr3.3:66708209-66708228 None:intergenic 55.0%
TCTTCGTCAACCATCGCCTC+AGG - chr3.3:66708222-66708241 None:intergenic 55.0%
TCTTGCAAGGTGTGAGGGGT+TGG - chr3.3:66708642-66708661 None:intergenic 55.0%
TGATGTCGATGGGGGAGAAG+AGG + chr3.3:66709094-66709113 MS.gene022244:CDS 55.0%
TGCAGCTCTTGCAAGGTGTG+AGG - chr3.3:66708648-66708667 None:intergenic 55.0%
TGTGTCCTGCAGCTCTTGCA+AGG - chr3.3:66708655-66708674 None:intergenic 55.0%
TTCCTGGGATTGCCTCTGCT+TGG - chr3.3:66708358-66708377 None:intergenic 55.0%
TTGAGGGGGATATTACCGCC+CGG + chr3.3:66708187-66708206 MS.gene022244:CDS 55.0%
! AATGGAAACCGCCTCTGAGG+GGG - chr3.3:66708720-66708739 None:intergenic 55.0%
! CCGCGAATGGTGGAAGGATA+AGG + chr3.3:66708524-66708543 MS.gene022244:CDS 55.0%
! CGGCTAAGGAAAGTGCAACC+TGG + chr3.3:66708964-66708983 MS.gene022244:CDS 55.0%
!! ACCGGCTGAGCCATTGGTTT+CGG - chr3.3:66709500-66709519 None:intergenic 55.0%
!! AGAAGGGTGTTCCTCCTCCA+TGG + chr3.3:66708742-66708761 MS.gene022244:CDS 55.0%
AAAGCCTGTGACCGGGGCAT+CGG + chr3.3:66708494-66708513 MS.gene022244:CDS 60.0%
ACTGTGATCCCCCTCAGAGG+CGG + chr3.3:66708709-66708728 MS.gene022244:CDS 60.0%
ATCCCCCCATTTGTCGCAGC+TGG + chr3.3:66709041-66709060 MS.gene022244:CDS 60.0%
CCCTCAGAGGCGGTTTCCAT+TGG + chr3.3:66708719-66708738 MS.gene022244:CDS 60.0%
CCGAGCTTGAGAGGAGGATG+TGG + chr3.3:66708268-66708287 MS.gene022244:CDS 60.0%
CGCCTCAGGTTCAGTTAGCC+GGG - chr3.3:66708208-66708227 None:intergenic 60.0%
CTCAGGTTCAGTTAGCCGGG+CGG - chr3.3:66708205-66708224 None:intergenic 60.0%
CTCCTCCATGGTGGCCTACA+GGG + chr3.3:66708754-66708773 MS.gene022244:CDS 60.0%
GCAGAGGCAATCCCAGGAAC+AGG + chr3.3:66708359-66708378 MS.gene022244:CDS 60.0%
GCCGCATCGGATCCTTCCTT+CGG - chr3.3:66708336-66708355 None:intergenic 60.0%
GCGGAGATTATCCGATGCCC+CGG - chr3.3:66708508-66708527 None:intergenic 60.0%
GGCAATCCCAGGAACAGGCA+AGG + chr3.3:66708364-66708383 MS.gene022244:CDS 60.0%
GGCCTACAGGGAAGGAAGAG+TGG + chr3.3:66708766-66708785 MS.gene022244:CDS 60.0%
GGTCCAGCTGCGACAAATGG+GGG - chr3.3:66709047-66709066 None:intergenic 60.0%
GTCCAGCTGCGACAAATGGG+GGG - chr3.3:66709046-66709065 None:intergenic 60.0%
GTGTGAGGGGTTGGACCGAT+CGG - chr3.3:66708633-66708652 None:intergenic 60.0%
TCAAGAGGAGGCCTTAGCGC+GGG + chr3.3:66709001-66709020 MS.gene022244:CDS 60.0%
TCCATGGTGGCCTACAGGGA+AGG + chr3.3:66708758-66708777 MS.gene022244:CDS 60.0%
TCCCCCTCAACTTGGGGTTG+GGG - chr3.3:66708177-66708196 None:intergenic 60.0%
TCCTTCCCTGTAGGCCACCA+TGG - chr3.3:66708762-66708781 None:intergenic 60.0%
TGCTCCCCAACCCCAAGTTG+AGG + chr3.3:66708170-66708189 MS.gene022244:CDS 60.0%
TGGCAGCCACTTAACCGCAG+CGG + chr3.3:66709643-66709662 MS.gene022244:CDS 60.0%
TTATCCGATGCCCCGGTCAC+AGG - chr3.3:66708501-66708520 None:intergenic 60.0%
TTCCCTGTAGGCCACCATGG+AGG - chr3.3:66708759-66708778 None:intergenic 60.0%
TTGCCTCTGCTTGGCCGCAT+CGG - chr3.3:66708349-66708368 None:intergenic 60.0%
! AGGGTGTTCCTCCTCCATGG+TGG + chr3.3:66708745-66708764 MS.gene022244:CDS 60.0%
! CTCCCCAACCCCAAGTTGAG+GGG + chr3.3:66708172-66708191 MS.gene022244:CDS 60.0%
! GCTCCCCAACCCCAAGTTGA+GGG + chr3.3:66708171-66708190 MS.gene022244:CDS 60.0%
! TCCCCAACCCCAAGTTGAGG+GGG + chr3.3:66708173-66708192 MS.gene022244:CDS 60.0%
CCTCCTCCATGGTGGCCTAC+AGG + chr3.3:66708753-66708772 MS.gene022244:CDS 65.0%
CCTGTAGGCCACCATGGAGG+AGG - chr3.3:66708756-66708775 None:intergenic 65.0%
CGCCCGGCTAACTGAACCTG+AGG + chr3.3:66708203-66708222 MS.gene022244:CDS 65.0%
GATCCGATGCGGCCAAGCAG+AGG + chr3.3:66708343-66708362 MS.gene022244:CDS 65.0%
GGCCAAGCAGAGGCAATCCC+AGG + chr3.3:66708353-66708372 MS.gene022244:CDS 65.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 66708114 66710030 66708114 ID=MS.gene022244
chr3.3 mRNA 66708114 66710030 66708114 ID=MS.gene022244.t1;Parent=MS.gene022244
chr3.3 exon 66708114 66710030 66708114 ID=MS.gene022244.t1.exon1;Parent=MS.gene022244.t1
chr3.3 CDS 66708114 66710030 66708114 ID=cds.MS.gene022244.t1;Parent=MS.gene022244.t1
Gene Sequence

>MS.gene022244

ATGATGATGATGTTTGATCATGAGATGGCTCTATCTGGTGATCTGGAAGTGTTTTCTGCTCCCCAACCCCAAGTTGAGGGGGATATTACCGCCCGGCTAACTGAACCTGAGGCGATGGTTGACGAAGATTACAGCGACGATGATATTGATGTTGCCGAGCTTGAGAGGAGGATGTGGAGGGATAAGGTGCTTCTCAAGCGATTAAAGGAGCAAGTCAAACCGAAGGAAGGATCCGATGCGGCCAAGCAGAGGCAATCCCAGGAACAGGCAAGGAGGAAAAAGATGTCAAGGGCTCAAGATGGAATCTTGAAGTACATGCTGAAAATGATGGAGGTTTGCAAGGCTCAAGGGTTTGTTTACGGGATCATTCCCGAGAAAGGAAAGCCTGTGACCGGGGCATCGGATAATCTCCGCGAATGGTGGAAGGATAAGGTTAGGTTTGACCGCAACGGTCCTGCTGCCATATCCAAGTACCAAGCTGACAATGCAATTCCGGGGAAGAATGATGGAGGCAATCCGATCGGTCCAACCCCTCACACCTTGCAAGAGCTGCAGGACACAACCTTGGGTTCTCTCTTATCTGCACTCATGCAACACTGTGATCCCCCTCAGAGGCGGTTTCCATTGGAGAAGGGTGTTCCTCCTCCATGGTGGCCTACAGGGAAGGAAGAGTGGTGGCCCCAAATCGGTTTACCGAAAGATCAAGGTCCTCCGCCTTACAAGAAACCTCATGATCTGAAGAAGGCATGGAAGGTTGGAGTTCTGACTGCTGTCATCAAGCACATGTCTCCCGACATTGCCAAAATTCGCAAGCTTGTAAGGCAATCCAAATGCCTTCAAGATAAAATGACGGCTAAGGAAAGTGCAACCTGGCTTGCAATCGTCAATCAAGAGGAGGCCTTAGCGCGGGAGCTTTATCCTGATTATATCCCCCCATTTGTCGCAGCTGGACCTTTCGGCATCAATGAAGGCAATGAGTATGATGTCGATGGGGGAGAAGAGGAGCCGAATTTTGATGTGGAGGAACGGAAACCTGAGAATCTTCTTCATCAATCCAACATTGGGATGATGGAGAGAATGAGAAATGTAAGACTGCCATTTCAGCAGACTTTCGCAATGAAGGAAGAGGCTGTGACCAACTTGGATTTCGTGAGGAAGCGGAAGATCTCTGGTGAATTTAACATGATGGATCCTAAAATTTTCACTTGCCAACACTCAACATGTCCTTATAGCCAAGCTCACATCGGTTTTCCAGACAGGGCTTCTAGGGATACTCATCAATTGAGTTGTCCATATAGAGGCTCTTCTTCATCTGATTTTGGTGGTCCAAGTTTTCATGCTAATGAGGTAAAACCAGTCATATATCCTCAGTCATTCGTTCAACCGAAACCAATGGCTCAGCCGGTTAATATGGTTCCACCTTCCATCGATATAACTGGACTTGGAGTTTCTGAAGATGGTGAGAAAAGGATTGGTGGCCTCATGACTGTCTATGATTCAGATATTCAAGGCAACATGAATTTAACTTCTGGCAGCCACTTAACCGCAGCGGAAAATCACATCTTGCCGCAAGCTAGCAGCATTCAGCAGCAGCATGAGAATTACTTCAGGGGTCAAGGAATGGTGATGGAAGGAAACATGTTTGAAGAAACCAACATGTCCAATAACAATCATCATCACATGTTTGCAAGAGATGAAGGTCAATTTGACCAAAGGTTCAAAGCTTTGAATTCTCCCTTTGAGAACAATCACAATCACAATCACAATCAGAATCACAACAATAATTTCCATTTAATGTTTGGGTCCCCACATTGTGATTTGACATCCTATGAGTTCAAGGGAGATATGCATGGAGTAGGCATCATGGATCATCTTCAGAAACAGCCAGATATTTCTTCATCAGTATGGTACCAGTGA
Protein sequence

>MS.gene022244.t1

MMMMFDHEMALSGDLEVFSAPQPQVEGDITARLTEPEAMVDEDYSDDDIDVAELERRMWRDKVLLKRLKEQVKPKEGSDAAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAISKYQADNAIPGKNDGGNPIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPTGKEEWWPQIGLPKDQGPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIVNQEEALARELYPDYIPPFVAAGPFGINEGNEYDVDGGEEEPNFDVEERKPENLLHQSNIGMMERMRNVRLPFQQTFAMKEEAVTNLDFVRKRKISGEFNMMDPKIFTCQHSTCPYSQAHIGFPDRASRDTHQLSCPYRGSSSSDFGGPSFHANEVKPVIYPQSFVQPKPMAQPVNMVPPSIDITGLGVSEDGEKRIGGLMTVYDSDIQGNMNLTSGSHLTAAENHILPQASSIQQQHENYFRGQGMVMEGNMFEETNMSNNNHHHMFARDEGQFDQRFKALNSPFENNHNHNHNQNHNNNFHLMFGSPHCDLTSYEFKGDMHGVGIMDHLQKQPDISSSVWYQ