Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022285.t1 | XP_003601291.2 | 65.5 | 362 | 1 | 1 | 5 | 242 | 2 | 363 | 5.20E-124 | 453.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022285.t1 | Q9ZQ31 | 23.5 | 272 | 98 | 2 | 54 | 218 | 121 | 389 | 2.5e-18 | 94.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022285.t1 | G7J5Z8 | 65.5 | 362 | 1 | 1 | 5 | 242 | 2 | 363 | 3.7e-124 | 453.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022285.t1 | MTR_3g078110 | 97.638 | 127 | 3 | 0 | 5 | 131 | 2 | 128 | 4.12e-86 | 260 |
MS.gene022285.t1 | MTR_3g078110 | 99.123 | 114 | 1 | 0 | 129 | 242 | 250 | 363 | 8.35e-83 | 251 |
MS.gene022285.t1 | MTR_4g106980 | 90.351 | 114 | 11 | 0 | 129 | 242 | 279 | 392 | 1.61e-76 | 236 |
MS.gene022285.t1 | MTR_4g106980 | 57.500 | 160 | 42 | 3 | 1 | 134 | 1 | 160 | 3.91e-53 | 176 |
MS.gene022285.t1 | MTR_6g007603 | 88.596 | 114 | 13 | 0 | 129 | 242 | 262 | 375 | 1.65e-74 | 231 |
MS.gene022285.t1 | MTR_6g007603 | 55.944 | 143 | 53 | 2 | 2 | 134 | 1 | 143 | 5.09e-49 | 165 |
MS.gene022285.t1 | MTR_5g006560 | 78.070 | 114 | 25 | 0 | 129 | 242 | 277 | 390 | 1.14e-66 | 211 |
MS.gene022285.t1 | MTR_5g006560 | 49.612 | 129 | 54 | 1 | 6 | 134 | 37 | 154 | 5.58e-33 | 123 |
MS.gene022285.t1 | MTR_5g006560 | 78.070 | 114 | 25 | 0 | 129 | 242 | 311 | 424 | 3.32e-66 | 211 |
MS.gene022285.t1 | MTR_5g006560 | 49.612 | 129 | 54 | 1 | 6 | 134 | 71 | 188 | 8.69e-33 | 123 |
MS.gene022285.t1 | MTR_1g103270 | 68.421 | 114 | 36 | 0 | 129 | 242 | 269 | 382 | 1.13e-55 | 182 |
MS.gene022285.t1 | MTR_1g103270 | 48.872 | 133 | 56 | 2 | 2 | 134 | 29 | 149 | 6.04e-35 | 128 |
MS.gene022285.t1 | MTR_4g106980 | 57.500 | 160 | 42 | 3 | 1 | 134 | 1 | 160 | 3.94e-54 | 177 |
MS.gene022285.t1 | MTR_4g106980 | 95.652 | 46 | 2 | 0 | 129 | 174 | 279 | 324 | 2.71e-26 | 104 |
MS.gene022285.t1 | MTR_8g100085 | 33.529 | 170 | 91 | 6 | 60 | 217 | 232 | 391 | 1.81e-22 | 95.1 |
MS.gene022285.t1 | MTR_8g100085 | 36.585 | 82 | 49 | 2 | 50 | 131 | 120 | 198 | 4.59e-11 | 62.4 |
MS.gene022285.t1 | MTR_3g034100 | 32.778 | 180 | 98 | 7 | 50 | 217 | 172 | 340 | 1.04e-21 | 92.4 |
MS.gene022285.t1 | MTR_3g034100 | 35.714 | 84 | 51 | 1 | 50 | 133 | 69 | 149 | 4.49e-12 | 65.1 |
MS.gene022285.t1 | MTR_4g088745 | 38.261 | 115 | 63 | 2 | 136 | 242 | 223 | 337 | 1.19e-21 | 92.4 |
MS.gene022285.t1 | MTR_4g088755 | 38.261 | 115 | 63 | 2 | 136 | 242 | 218 | 332 | 1.41e-21 | 92.0 |
MS.gene022285.t1 | MTR_4g132860 | 30.208 | 192 | 107 | 6 | 59 | 234 | 174 | 354 | 1.19e-20 | 89.7 |
MS.gene022285.t1 | MTR_4g088750 | 45.238 | 84 | 46 | 0 | 136 | 219 | 379 | 462 | 6.55e-20 | 88.6 |
MS.gene022285.t1 | MTR_2g013900 | 36.522 | 115 | 65 | 2 | 136 | 242 | 340 | 454 | 9.03e-20 | 87.8 |
MS.gene022285.t1 | MTR_1g026160 | 38.202 | 89 | 55 | 0 | 129 | 217 | 310 | 398 | 6.96e-19 | 85.1 |
MS.gene022285.t1 | MTR_4g105770 | 40.506 | 79 | 47 | 0 | 136 | 214 | 235 | 313 | 6.15e-18 | 82.0 |
MS.gene022285.t1 | MTR_3g078000 | 30.233 | 172 | 98 | 6 | 60 | 219 | 156 | 317 | 7.04e-18 | 81.6 |
MS.gene022285.t1 | MTR_5g023150 | 34.091 | 88 | 58 | 0 | 129 | 216 | 363 | 450 | 3.07e-17 | 80.5 |
MS.gene022285.t1 | MTR_5g023150 | 34.091 | 88 | 58 | 0 | 129 | 216 | 460 | 547 | 3.52e-17 | 80.5 |
MS.gene022285.t1 | MTR_5g066490 | 32.857 | 140 | 80 | 3 | 89 | 223 | 785 | 915 | 1.19e-16 | 79.3 |
MS.gene022285.t1 | MTR_6g079540 | 33.654 | 104 | 69 | 0 | 129 | 232 | 580 | 683 | 4.28e-16 | 77.4 |
MS.gene022285.t1 | MTR_6g079540 | 33.654 | 104 | 69 | 0 | 129 | 232 | 828 | 931 | 4.62e-16 | 77.4 |
MS.gene022285.t1 | MTR_3g114900 | 35.955 | 89 | 57 | 0 | 129 | 217 | 435 | 523 | 7.24e-16 | 76.6 |
MS.gene022285.t1 | MTR_1g099110 | 37.805 | 82 | 48 | 2 | 129 | 209 | 431 | 510 | 1.60e-15 | 75.9 |
MS.gene022285.t1 | MTR_1g099110 | 37.805 | 82 | 48 | 2 | 129 | 209 | 448 | 527 | 1.86e-15 | 75.5 |
MS.gene022285.t1 | MTR_1g113960 | 31.183 | 93 | 64 | 0 | 129 | 221 | 466 | 558 | 8.61e-15 | 73.6 |
MS.gene022285.t1 | MTR_1g113960 | 31.818 | 88 | 60 | 0 | 129 | 216 | 466 | 553 | 1.49e-14 | 72.8 |
MS.gene022285.t1 | MTR_1g081790 | 31.250 | 128 | 79 | 2 | 89 | 216 | 826 | 944 | 1.88e-14 | 72.8 |
MS.gene022285.t1 | MTR_1g016300 | 37.647 | 85 | 53 | 0 | 129 | 213 | 831 | 915 | 2.55e-14 | 72.4 |
MS.gene022285.t1 | MTR_8g442400 | 34.409 | 93 | 59 | 1 | 129 | 219 | 1563 | 1655 | 2.89e-14 | 72.4 |
MS.gene022285.t1 | MTR_4g116520 | 33.333 | 93 | 60 | 1 | 129 | 219 | 1269 | 1361 | 4.11e-14 | 72.0 |
MS.gene022285.t1 | MTR_1g050690 | 31.008 | 129 | 80 | 2 | 88 | 216 | 555 | 674 | 4.72e-14 | 71.6 |
MS.gene022285.t1 | MTR_2g461180 | 33.333 | 90 | 58 | 1 | 129 | 216 | 1304 | 1393 | 6.01e-14 | 71.2 |
MS.gene022285.t1 | MTR_6g033130 | 33.333 | 96 | 62 | 1 | 129 | 222 | 1144 | 1239 | 7.40e-14 | 71.2 |
MS.gene022285.t1 | MTR_8g107000 | 31.818 | 88 | 60 | 0 | 129 | 216 | 897 | 984 | 8.46e-14 | 70.9 |
MS.gene022285.t1 | MTR_7g072710 | 38.462 | 78 | 48 | 0 | 136 | 213 | 229 | 306 | 1.86e-13 | 69.3 |
MS.gene022285.t1 | MTR_7g072710 | 38.462 | 78 | 48 | 0 | 136 | 213 | 192 | 269 | 2.78e-13 | 68.6 |
MS.gene022285.t1 | MTR_5g010730 | 32.955 | 88 | 59 | 0 | 129 | 216 | 591 | 678 | 2.99e-13 | 69.3 |
MS.gene022285.t1 | MTR_3g465590 | 36.986 | 73 | 46 | 0 | 141 | 213 | 508 | 580 | 3.02e-13 | 68.9 |
MS.gene022285.t1 | MTR_4g128650 | 34.409 | 93 | 59 | 1 | 129 | 219 | 988 | 1080 | 4.38e-13 | 68.9 |
MS.gene022285.t1 | MTR_5g010730 | 32.955 | 88 | 59 | 0 | 129 | 216 | 646 | 733 | 5.26e-13 | 68.6 |
MS.gene022285.t1 | MTR_1g061190 | 29.688 | 128 | 81 | 2 | 89 | 216 | 694 | 812 | 1.03e-12 | 67.8 |
MS.gene022285.t1 | MTR_3g100090 | 29.457 | 129 | 82 | 2 | 88 | 216 | 791 | 910 | 1.13e-12 | 67.4 |
MS.gene022285.t1 | MTR_1g090020 | 33.333 | 93 | 60 | 1 | 129 | 219 | 1077 | 1169 | 2.28e-12 | 66.6 |
MS.gene022285.t1 | MTR_2g034020 | 34.091 | 88 | 58 | 0 | 129 | 216 | 634 | 721 | 4.82e-12 | 65.5 |
MS.gene022285.t1 | MTR_5g072500 | 32.877 | 73 | 49 | 0 | 141 | 213 | 511 | 583 | 1.57e-11 | 63.9 |
MS.gene022285.t1 | MTR_1g050520 | 33.333 | 105 | 53 | 2 | 129 | 216 | 211 | 315 | 1.59e-11 | 63.9 |
MS.gene022285.t1 | MTR_4g122160 | 38.158 | 76 | 47 | 0 | 129 | 204 | 628 | 703 | 1.95e-11 | 63.9 |
MS.gene022285.t1 | MTR_3g104900 | 27.941 | 136 | 83 | 4 | 86 | 215 | 314 | 440 | 2.06e-11 | 63.5 |
MS.gene022285.t1 | MTR_1g081790 | 33.333 | 108 | 63 | 2 | 89 | 196 | 826 | 924 | 3.95e-11 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022285.t1 | AT3G01490 | 88.596 | 114 | 13 | 0 | 129 | 242 | 298 | 411 | 2.59e-74 | 231 |
MS.gene022285.t1 | AT3G01490 | 50.299 | 167 | 43 | 3 | 7 | 133 | 12 | 178 | 2.69e-46 | 159 |
MS.gene022285.t1 | AT5G50000 | 85.965 | 114 | 16 | 0 | 129 | 242 | 272 | 385 | 9.97e-74 | 229 |
MS.gene022285.t1 | AT5G50000 | 56.209 | 153 | 48 | 2 | 1 | 134 | 1 | 153 | 3.64e-52 | 174 |
MS.gene022285.t1 | AT3G22750 | 73.684 | 114 | 30 | 0 | 129 | 242 | 265 | 378 | 5.79e-65 | 206 |
MS.gene022285.t1 | AT3G22750 | 50.382 | 131 | 54 | 1 | 4 | 134 | 26 | 145 | 4.60e-39 | 139 |
MS.gene022285.t1 | AT3G63260 | 76.316 | 114 | 27 | 0 | 129 | 242 | 278 | 391 | 4.76e-63 | 202 |
MS.gene022285.t1 | AT3G63260 | 48.031 | 127 | 58 | 2 | 8 | 134 | 36 | 154 | 1.46e-30 | 117 |
MS.gene022285.t1 | AT4G14780 | 72.807 | 114 | 31 | 0 | 129 | 242 | 251 | 364 | 6.18e-63 | 201 |
MS.gene022285.t1 | AT4G14780 | 51.181 | 127 | 51 | 2 | 8 | 134 | 17 | 132 | 2.88e-35 | 129 |
MS.gene022285.t1 | AT5G50000 | 56.209 | 153 | 48 | 2 | 1 | 134 | 1 | 153 | 7.35e-53 | 174 |
MS.gene022285.t1 | AT5G50000 | 93.478 | 46 | 3 | 0 | 129 | 174 | 272 | 317 | 2.32e-26 | 104 |
MS.gene022285.t1 | AT3G01490 | 50.909 | 165 | 41 | 3 | 7 | 131 | 12 | 176 | 8.00e-47 | 159 |
MS.gene022285.t1 | AT3G01490 | 93.478 | 46 | 3 | 0 | 129 | 174 | 298 | 343 | 1.28e-25 | 103 |
MS.gene022285.t1 | AT3G63260 | 48.031 | 127 | 58 | 2 | 8 | 134 | 36 | 154 | 6.48e-31 | 117 |
MS.gene022285.t1 | AT3G63260 | 76.087 | 46 | 11 | 0 | 129 | 174 | 278 | 323 | 8.54e-20 | 87.0 |
MS.gene022285.t1 | AT3G46930 | 42.391 | 92 | 52 | 1 | 129 | 219 | 335 | 426 | 7.91e-21 | 90.9 |
MS.gene022285.t1 | AT3G46930 | 42.391 | 92 | 52 | 1 | 129 | 219 | 370 | 461 | 9.48e-21 | 90.9 |
MS.gene022285.t1 | AT2G24360 | 32.749 | 171 | 93 | 5 | 60 | 218 | 229 | 389 | 2.03e-20 | 89.4 |
MS.gene022285.t1 | AT1G62400 | 30.055 | 183 | 100 | 6 | 59 | 224 | 180 | 351 | 3.13e-20 | 89.0 |
MS.gene022285.t1 | AT5G58950 | 36.522 | 115 | 68 | 2 | 129 | 241 | 379 | 490 | 5.17e-20 | 89.0 |
MS.gene022285.t1 | AT4G31170 | 33.835 | 133 | 78 | 3 | 86 | 218 | 268 | 390 | 2.12e-19 | 86.7 |
MS.gene022285.t1 | AT4G31170 | 33.835 | 133 | 78 | 3 | 86 | 218 | 268 | 390 | 2.12e-19 | 86.7 |
MS.gene022285.t1 | AT4G31170 | 33.835 | 133 | 78 | 3 | 86 | 218 | 268 | 390 | 2.12e-19 | 86.7 |
MS.gene022285.t1 | AT4G31170 | 33.835 | 133 | 78 | 3 | 86 | 218 | 268 | 390 | 2.12e-19 | 86.7 |
MS.gene022285.t1 | AT4G31170 | 33.835 | 133 | 78 | 3 | 86 | 218 | 268 | 390 | 2.12e-19 | 86.7 |
MS.gene022285.t1 | AT4G31170 | 33.835 | 133 | 78 | 3 | 86 | 218 | 268 | 390 | 2.12e-19 | 86.7 |
MS.gene022285.t1 | AT4G31170 | 33.835 | 133 | 78 | 3 | 86 | 218 | 268 | 390 | 2.12e-19 | 86.7 |
MS.gene022285.t1 | AT2G17700 | 36.364 | 88 | 56 | 0 | 129 | 216 | 451 | 538 | 7.74e-18 | 82.4 |
MS.gene022285.t1 | AT3G46920 | 38.043 | 92 | 55 | 1 | 129 | 218 | 983 | 1074 | 3.54e-16 | 77.8 |
MS.gene022285.t1 | AT3G46920 | 38.043 | 92 | 55 | 1 | 129 | 218 | 1049 | 1140 | 3.82e-16 | 77.8 |
MS.gene022285.t1 | AT3G24715 | 35.556 | 90 | 56 | 1 | 129 | 216 | 1013 | 1102 | 2.37e-15 | 75.5 |
MS.gene022285.t1 | AT3G24715 | 35.556 | 90 | 56 | 1 | 129 | 216 | 1013 | 1102 | 2.37e-15 | 75.5 |
MS.gene022285.t1 | AT3G24715 | 35.556 | 90 | 56 | 1 | 129 | 216 | 1013 | 1102 | 2.37e-15 | 75.5 |
MS.gene022285.t1 | AT1G16270 | 36.559 | 93 | 57 | 1 | 129 | 219 | 1040 | 1132 | 3.53e-15 | 75.1 |
MS.gene022285.t1 | AT1G16270 | 36.559 | 93 | 57 | 1 | 129 | 219 | 1040 | 1132 | 3.53e-15 | 75.1 |
MS.gene022285.t1 | AT1G16270 | 36.559 | 93 | 57 | 1 | 129 | 219 | 1040 | 1132 | 3.53e-15 | 75.1 |
MS.gene022285.t1 | AT4G35780 | 31.818 | 88 | 60 | 0 | 129 | 216 | 457 | 544 | 7.34e-15 | 73.9 |
MS.gene022285.t1 | AT1G73660 | 28.986 | 138 | 89 | 2 | 89 | 226 | 885 | 1013 | 9.14e-15 | 73.9 |
MS.gene022285.t1 | AT5G11850 | 31.783 | 129 | 79 | 2 | 88 | 216 | 745 | 864 | 1.02e-14 | 73.6 |
MS.gene022285.t1 | AT1G18160 | 27.536 | 138 | 91 | 2 | 89 | 226 | 852 | 980 | 1.03e-14 | 73.6 |
MS.gene022285.t1 | AT1G79570 | 34.409 | 93 | 59 | 1 | 129 | 219 | 1141 | 1233 | 1.86e-14 | 72.8 |
MS.gene022285.t1 | AT1G79570 | 34.409 | 93 | 59 | 1 | 129 | 219 | 1141 | 1233 | 1.86e-14 | 72.8 |
MS.gene022285.t1 | AT4G38470 | 30.682 | 88 | 61 | 0 | 129 | 216 | 455 | 542 | 3.02e-14 | 72.0 |
MS.gene022285.t1 | AT4G23050 | 30.526 | 95 | 66 | 0 | 129 | 223 | 636 | 730 | 3.50e-14 | 72.0 |
MS.gene022285.t1 | AT4G23050 | 30.526 | 95 | 66 | 0 | 129 | 223 | 635 | 729 | 3.67e-14 | 72.0 |
MS.gene022285.t1 | AT1G08720 | 34.831 | 89 | 58 | 0 | 129 | 217 | 837 | 925 | 4.23e-14 | 71.6 |
MS.gene022285.t1 | AT4G38470 | 30.682 | 88 | 61 | 0 | 129 | 216 | 455 | 542 | 4.34e-14 | 71.6 |
MS.gene022285.t1 | AT4G24480 | 31.081 | 148 | 92 | 3 | 88 | 235 | 807 | 944 | 4.89e-14 | 71.6 |
MS.gene022285.t1 | AT1G04700 | 35.556 | 90 | 56 | 1 | 129 | 216 | 943 | 1032 | 8.04e-14 | 70.9 |
MS.gene022285.t1 | AT1G04700 | 35.556 | 90 | 56 | 1 | 129 | 216 | 943 | 1032 | 8.04e-14 | 70.9 |
MS.gene022285.t1 | AT4G24480 | 31.783 | 129 | 79 | 2 | 88 | 216 | 807 | 926 | 1.52e-13 | 70.1 |
MS.gene022285.t1 | AT4G24480 | 31.783 | 129 | 79 | 2 | 88 | 216 | 812 | 931 | 1.81e-13 | 70.1 |
MS.gene022285.t1 | AT5G01850 | 35.897 | 78 | 50 | 0 | 136 | 213 | 202 | 279 | 3.54e-13 | 68.2 |
MS.gene022285.t1 | AT5G57610 | 34.444 | 90 | 57 | 1 | 129 | 216 | 958 | 1047 | 3.61e-13 | 68.9 |
MS.gene022285.t1 | AT5G01850 | 35.897 | 78 | 50 | 0 | 136 | 213 | 226 | 303 | 4.11e-13 | 68.2 |
MS.gene022285.t1 | AT5G03730 | 30.534 | 131 | 82 | 1 | 89 | 219 | 690 | 811 | 8.35e-13 | 67.8 |
MS.gene022285.t1 | AT5G03730 | 30.534 | 131 | 82 | 1 | 89 | 219 | 690 | 811 | 8.35e-13 | 67.8 |
MS.gene022285.t1 | AT2G35050 | 33.735 | 83 | 55 | 0 | 137 | 219 | 1160 | 1242 | 1.28e-12 | 67.4 |
MS.gene022285.t1 | AT2G35050 | 33.735 | 83 | 55 | 0 | 137 | 219 | 1160 | 1242 | 1.28e-12 | 67.4 |
MS.gene022285.t1 | AT3G50730 | 29.054 | 148 | 90 | 4 | 75 | 213 | 155 | 296 | 1.45e-12 | 66.6 |
MS.gene022285.t1 | AT2G40860 | 33.333 | 105 | 53 | 3 | 129 | 216 | 112 | 216 | 1.09e-11 | 64.3 |
MS.gene022285.t1 | AT5G49470 | 31.818 | 88 | 60 | 0 | 129 | 216 | 372 | 459 | 1.47e-11 | 63.9 |
MS.gene022285.t1 | AT5G49470 | 31.818 | 88 | 60 | 0 | 129 | 216 | 659 | 746 | 1.87e-11 | 63.9 |
MS.gene022285.t1 | AT2G40860 | 33.333 | 105 | 53 | 3 | 129 | 216 | 210 | 314 | 1.98e-11 | 63.9 |
MS.gene022285.t1 | AT2G40860 | 33.333 | 105 | 53 | 3 | 129 | 216 | 210 | 314 | 2.15e-11 | 63.5 |
MS.gene022285.t1 | AT5G49470 | 31.818 | 88 | 60 | 0 | 129 | 216 | 532 | 619 | 2.18e-11 | 63.5 |
MS.gene022285.t1 | AT2G40860 | 33.333 | 105 | 53 | 3 | 129 | 216 | 210 | 314 | 2.65e-11 | 63.5 |
MS.gene022285.t1 | AT5G49470 | 31.818 | 88 | 60 | 0 | 129 | 216 | 720 | 807 | 2.66e-11 | 63.5 |
MS.gene022285.t1 | AT1G18160 | 29.630 | 108 | 67 | 2 | 89 | 196 | 852 | 950 | 2.66e-11 | 63.5 |
MS.gene022285.t1 | AT5G49470 | 31.818 | 88 | 60 | 0 | 129 | 216 | 633 | 720 | 2.95e-11 | 63.2 |
MS.gene022285.t1 | AT5G40540 | 32.609 | 92 | 60 | 2 | 136 | 226 | 113 | 203 | 5.61e-11 | 61.2 |
MS.gene022285.t1 | AT5G40540 | 32.609 | 92 | 60 | 2 | 136 | 226 | 134 | 224 | 6.98e-11 | 61.2 |
MS.gene022285.t1 | AT5G40540 | 32.609 | 92 | 60 | 2 | 136 | 226 | 210 | 300 | 7.24e-11 | 61.6 |
Find 67 sgRNAs with CRISPR-Local
Find 154 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGACAACATCTTGGTATTTC+TGG | 0.123520 | 3.3:-66281191 | None:intergenic |
ACATCACATTTCCTGTTATA+GGG | 0.216565 | 3.3:-66280981 | None:intergenic |
TCCATTTCAGGTCTCTTATC+AGG | 0.236260 | 3.3:-66281257 | None:intergenic |
GCAACTACCTCATCCATTTC+AGG | 0.266967 | 3.3:-66281269 | None:intergenic |
TTTCTCAAGTTGTTCATCTA+TGG | 0.275266 | 3.3:-66279055 | None:intergenic |
TACATCACATTTCCTGTTAT+AGG | 0.289380 | 3.3:-66280982 | None:intergenic |
GTCTTAGCTCGTGGCACTTT+TGG | 0.316027 | 3.3:+66279204 | MS.gene022285:CDS |
AAATGTGATGTATATAGTTT+TGG | 0.339439 | 3.3:+66280993 | MS.gene022285:CDS |
ATTACATTTGCCACGGAACT+TGG | 0.347319 | 3.3:-66281212 | None:intergenic |
TAAATGGCAACCCCTATAAC+AGG | 0.362847 | 3.3:+66280970 | MS.gene022285:CDS |
CAACCTTGCTGCTGATCAAA+AGG | 0.378741 | 3.3:-66281335 | None:intergenic |
TACTTCAGCCGTTGTTCGCC+AGG | 0.379074 | 3.3:+66281079 | MS.gene022285:CDS |
ACTCTTGATGGTGAGGTTAG+AGG | 0.382519 | 3.3:-66279181 | None:intergenic |
TCACGCAAGAAGTCATTGTT+TGG | 0.402517 | 3.3:+66280462 | MS.gene022285:CDS |
AAATGTACCTTAGTTACATT+AGG | 0.412990 | 3.3:-66280500 | None:intergenic |
TCCAGTTAAAATGCTGGATT+GGG | 0.421754 | 3.3:+66280388 | MS.gene022285:intron |
CGGACAGAAGCTGAAATTGC+TGG | 0.422929 | 3.3:+66280425 | MS.gene022285:CDS |
TTCAGGTCTCTTATCAGGAT+TGG | 0.429223 | 3.3:-66281252 | None:intergenic |
AGGGATCATACCTCCACCTT+TGG | 0.430939 | 3.3:-66281315 | None:intergenic |
TCCTGATAAGAGACCTGAAA+TGG | 0.434498 | 3.3:+66281256 | MS.gene022285:CDS |
GTCCAGTTAAAATGCTGGAT+TGG | 0.434644 | 3.3:+66280387 | MS.gene022285:intron |
CTCTTGATGGTGAGGTTAGA+GGG | 0.437518 | 3.3:-66279180 | None:intergenic |
GAGAAACTTAGGTCAGGATA+TGG | 0.443369 | 3.3:-66281050 | None:intergenic |
TTAATGTCCAGTTAAAATGC+TGG | 0.452338 | 3.3:+66280382 | MS.gene022285:intron |
TAATCATCCTAATGTAACTA+AGG | 0.467268 | 3.3:+66280493 | MS.gene022285:CDS |
ATTGGGGTGAAGAAGGTTAC+CGG | 0.469004 | 3.3:+66280405 | MS.gene022285:CDS |
CAAATGTAATGAAGAAATGC+TGG | 0.471222 | 3.3:+66281225 | MS.gene022285:CDS |
ACGGAACTTGGACAACATCT+TGG | 0.472680 | 3.3:-66281200 | None:intergenic |
GTAAGTTACCAGCAACATCT+TGG | 0.474494 | 3.3:-66279254 | None:intergenic |
ACGAGCTAAGACACTCTTGA+TGG | 0.475212 | 3.3:-66279193 | None:intergenic |
ATGCTGGATTGGGGTGAAGA+AGG | 0.482593 | 3.3:+66280398 | MS.gene022285:CDS |
AAGTAATCTCTGAGAAACTT+AGG | 0.484597 | 3.3:-66281061 | None:intergenic |
TATGATGGCCAAGATGTTGC+TGG | 0.488459 | 3.3:+66279246 | MS.gene022285:CDS |
ATCTCTGAGAAACTTAGGTC+AGG | 0.495056 | 3.3:-66281056 | None:intergenic |
CAGCAAGGTTGTCTCTGCTT+CGG | 0.497717 | 3.3:+66281347 | MS.gene022285:CDS |
AAAATGATGGAAAAGAATGA+TGG | 0.498117 | 3.3:+66279000 | None:intergenic |
CAGCAATTTCAGCTTCTGTC+CGG | 0.499893 | 3.3:-66280424 | None:intergenic |
TCTGCTTCGGTAAGCGCCGA+GGG | 0.505983 | 3.3:+66281360 | MS.gene022285:CDS |
GTTCACCGTGGTTTCTATGA+TGG | 0.507375 | 3.3:+66279231 | MS.gene022285:CDS |
CATCACATTTCCTGTTATAG+GGG | 0.508040 | 3.3:-66280980 | None:intergenic |
GGATGAGGTAGTTGCCATGC+TGG | 0.516875 | 3.3:+66281277 | MS.gene022285:CDS |
TCAAACTCTATTGCTACTAC+TGG | 0.530513 | 3.3:+66279117 | MS.gene022285:CDS |
AAATGATGGAAAAGAATGAT+GGG | 0.533794 | 3.3:+66279001 | None:intergenic |
AAGCTGAAATTGCTGGACTC+AGG | 0.535768 | 3.3:+66280432 | MS.gene022285:CDS |
AACCTTGCTGCTGATCAAAA+GGG | 0.536519 | 3.3:-66281334 | None:intergenic |
CATGGAGCAAAGAGAAGAGT+GGG | 0.541395 | 3.3:+66279149 | MS.gene022285:CDS |
CTCTGCTTCGGTAAGCGCCG+AGG | 0.551514 | 3.3:+66281359 | MS.gene022285:CDS |
AACTCTATTGCTACTACTGG+TGG | 0.569622 | 3.3:+66279120 | MS.gene022285:CDS |
TAAGAGACCTGAAATGGATG+AGG | 0.598450 | 3.3:+66281262 | MS.gene022285:CDS |
CTAAGACACTCTTGATGGTG+AGG | 0.606744 | 3.3:-66279188 | None:intergenic |
ACATGGAGCAAAGAGAAGAG+TGG | 0.607383 | 3.3:+66279148 | MS.gene022285:CDS |
TGACTGTAAATCAAGGCCCT+CGG | 0.612579 | 3.3:-66281376 | None:intergenic |
ATCAAGAGTGTCTTAGCTCG+TGG | 0.616920 | 3.3:+66279195 | MS.gene022285:CDS |
AAGATATACCTGGCGAACAA+CGG | 0.618092 | 3.3:-66281087 | None:intergenic |
ATTGACACATCCAAAGGTGG+AGG | 0.618735 | 3.3:+66281305 | MS.gene022285:CDS |
AAATGTAATGAAGAAATGCT+GGG | 0.631816 | 3.3:+66281226 | MS.gene022285:CDS |
TTTCTTCATTACATTTGCCA+CGG | 0.633341 | 3.3:-66281219 | None:intergenic |
GCTATTGACACATCCAAAGG+TGG | 0.643411 | 3.3:+66281302 | MS.gene022285:CDS |
TCTTGATGGTGAGGTTAGAG+GGG | 0.645628 | 3.3:-66279179 | None:intergenic |
TACTACTGGTGGTAATAACA+TGG | 0.654878 | 3.3:+66279131 | MS.gene022285:CDS |
AAGATGTTGTCCAAGTTCCG+TGG | 0.660139 | 3.3:+66281202 | MS.gene022285:CDS |
GAGGCTATTGACACATCCAA+AGG | 0.661527 | 3.3:+66281299 | MS.gene022285:CDS |
TGTGTCAATAGCCTCCAGCA+TGG | 0.665984 | 3.3:-66281291 | None:intergenic |
CTTGGCCATCATAGAAACCA+CGG | 0.693286 | 3.3:-66279236 | None:intergenic |
TGAGGTAGTTGCCATGCTGG+AGG | 0.694334 | 3.3:+66281280 | MS.gene022285:CDS |
ACTTGAGAAACACTTCAACA+AGG | 0.709526 | 3.3:+66279068 | MS.gene022285:CDS |
CCAGTTAAAATGCTGGATTG+GGG | 0.753014 | 3.3:+66280389 | MS.gene022285:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAATAAGTTGTTAAAATAC+AGG | + | chr3.3:66279522-66279541 | MS.gene022285:intron | 15.0% |
!!! | AAAAATTTGAAGTAACTATT+TGG | - | chr3.3:66279767-66279786 | None:intergenic | 15.0% |
!!! | TTTTAACTTATTTGACAAAT+GGG | + | chr3.3:66280926-66280945 | MS.gene022285:intron | 15.0% |
!! | ATACAATTGAAACTAATCTA+TGG | - | chr3.3:66281116-66281135 | None:intergenic | 20.0% |
!! | ATGAATCCATATTGATATAT+TGG | + | chr3.3:66281141-66281160 | MS.gene022285:intron | 20.0% |
!! | TACAAACCAATATATCAATA+TGG | - | chr3.3:66281150-66281169 | None:intergenic | 20.0% |
!! | TCAAATAAGTCAATTCAAAT+AGG | + | chr3.3:66280143-66280162 | MS.gene022285:intron | 20.0% |
!! | TTAACAACTTATTATCAATC+TGG | - | chr3.3:66279517-66279536 | None:intergenic | 20.0% |
!!! | AAATGTGATGTATATAGTTT+TGG | + | chr3.3:66280993-66281012 | MS.gene022285:CDS | 20.0% |
!!! | ACAATAACACTTAACTTTTT+TGG | + | chr3.3:66280349-66280368 | MS.gene022285:intron | 20.0% |
!!! | ATCAAATAAAAGCTTTTTTG+TGG | - | chr3.3:66280881-66280900 | None:intergenic | 20.0% |
!!! | CAATAACACTTAACTTTTTT+GGG | + | chr3.3:66280350-66280369 | MS.gene022285:intron | 20.0% |
!!! | CTTTTAACTTATTTGACAAA+TGG | + | chr3.3:66280925-66280944 | MS.gene022285:intron | 20.0% |
! | AAAGTCAAAGACTAATTTAG+TGG | + | chr3.3:66279647-66279666 | MS.gene022285:intron | 25.0% |
! | AAATGTAATGAAGAAATGCT+GGG | + | chr3.3:66281226-66281245 | MS.gene022285:CDS | 25.0% |
! | AAATGTACCTTAGTTACATT+AGG | - | chr3.3:66280503-66280522 | None:intergenic | 25.0% |
! | CTAATTTCAATAATCTCTCT+AGG | - | chr3.3:66280039-66280058 | None:intergenic | 25.0% |
! | CTAGAGAGATTATTGAAATT+AGG | + | chr3.3:66280037-66280056 | MS.gene022285:intron | 25.0% |
! | TAATCATCCTAATGTAACTA+AGG | + | chr3.3:66280493-66280512 | MS.gene022285:CDS | 25.0% |
!! | AATTAGGTGAAAATAGCTTT+TGG | + | chr3.3:66280053-66280072 | MS.gene022285:intron | 25.0% |
!! | ATTAGAAGATTGGAATGTTT+TGG | + | chr3.3:66279900-66279919 | MS.gene022285:intron | 25.0% |
!! | ATTTTATGGTAAAGGTTTCA+AGG | - | chr3.3:66280832-66280851 | None:intergenic | 25.0% |
!! | CTTTACAATGATTTGATGAT+GGG | + | chr3.3:66279844-66279863 | MS.gene022285:intron | 25.0% |
!! | TTTTATGGTAAAGGTTTCAA+GGG | - | chr3.3:66280831-66280850 | None:intergenic | 25.0% |
!!! | AAATTAGTCTTTGACTTTGT+AGG | - | chr3.3:66279645-66279664 | None:intergenic | 25.0% |
!!! | AATCATTTTGAGAGTATACT+AGG | + | chr3.3:66279459-66279478 | MS.gene022285:intron | 25.0% |
!!! | ATAGTTTTGGCATATGTTTA+TGG | + | chr3.3:66281006-66281025 | MS.gene022285:CDS | 25.0% |
!!! | ATAGTTTTGTTTTCAGGAAA+CGG | + | chr3.3:66280631-66280650 | MS.gene022285:intron | 25.0% |
!!! | TAGTTTTGGCATATGTTTAT+GGG | + | chr3.3:66281007-66281026 | MS.gene022285:CDS | 25.0% |
!!! | TATCTACTTATTGCTGATTT+CGG | + | chr3.3:66280714-66280733 | MS.gene022285:intron | 25.0% |
!!! | TGATCGATTTTAATTTTGTG+AGG | + | chr3.3:66280284-66280303 | MS.gene022285:intron | 25.0% |
AAATGTAGGGATCAACTTAA+TGG | + | chr3.3:66279565-66279584 | MS.gene022285:intron | 30.0% | |
AACCAACAAGATAACATCAA+CGG | - | chr3.3:66279687-66279706 | None:intergenic | 30.0% | |
ACATCACATTTCCTGTTATA+GGG | - | chr3.3:66280984-66281003 | None:intergenic | 30.0% | |
ATTTAACCGGTTACTCAATT+AGG | - | chr3.3:66279549-66279568 | None:intergenic | 30.0% | |
CAAATGTAATGAAGAAATGC+TGG | + | chr3.3:66281225-66281244 | MS.gene022285:CDS | 30.0% | |
CCATCATCAAATCATTGTAA+AGG | - | chr3.3:66279846-66279865 | None:intergenic | 30.0% | |
CCTTTACAATGATTTGATGA+TGG | + | chr3.3:66279843-66279862 | MS.gene022285:intron | 30.0% | |
GTAGCATGTTATTGTTAGAT+TGG | + | chr3.3:66280190-66280209 | MS.gene022285:intron | 30.0% | |
TACATCACATTTCCTGTTAT+AGG | - | chr3.3:66280985-66281004 | None:intergenic | 30.0% | |
TGAAAATGTGTTATCCAAGT+TGG | + | chr3.3:66279927-66279946 | MS.gene022285:intron | 30.0% | |
TTAATGTCCAGTTAAAATGC+TGG | + | chr3.3:66280382-66280401 | MS.gene022285:intron | 30.0% | |
TTTCTTCATTACATTTGCCA+CGG | - | chr3.3:66281222-66281241 | None:intergenic | 30.0% | |
! | AAGTAATCTCTGAGAAACTT+AGG | - | chr3.3:66281064-66281083 | None:intergenic | 30.0% |
! | AGCGAAATTGTTTCTTTCAT+CGG | - | chr3.3:66280265-66280284 | None:intergenic | 30.0% |
! | CATATTGGCGCAATATTTTA+TGG | - | chr3.3:66280846-66280865 | None:intergenic | 30.0% |
! | TGTTATTGTTAGATTGGTTG+TGG | + | chr3.3:66280196-66280215 | MS.gene022285:intron | 30.0% |
! | TTTCTCAAGTTGTTCATCTA+TGG | - | chr3.3:66279058-66279077 | None:intergenic | 30.0% |
!!! | GATGGTTTACAGGTTTTAAA+TGG | + | chr3.3:66280954-66280973 | MS.gene022285:intron | 30.0% |
AACCGTTGATGTTATCTTGT+TGG | + | chr3.3:66279682-66279701 | MS.gene022285:intron | 35.0% | |
AATCTTCTAATGAGAAGCAG+AGG | - | chr3.3:66279891-66279910 | None:intergenic | 35.0% | |
AATTCAAATAGGCTCTTGTG+TGG | + | chr3.3:66280154-66280173 | MS.gene022285:intron | 35.0% | |
ACTTGAGAAACACTTCAACA+AGG | + | chr3.3:66279068-66279087 | MS.gene022285:CDS | 35.0% | |
AGAGAGTTGAAGCTAATGAA+AGG | - | chr3.3:66280526-66280545 | None:intergenic | 35.0% | |
AGTTGATCCCTACATTTAAC+CGG | - | chr3.3:66279562-66279581 | None:intergenic | 35.0% | |
ATCTTCTAATGAGAAGCAGA+GGG | - | chr3.3:66279890-66279909 | None:intergenic | 35.0% | |
CATCACATTTCCTGTTATAG+GGG | - | chr3.3:66280983-66281002 | None:intergenic | 35.0% | |
CGAATCCTAATGATATGACT+GGG | + | chr3.3:66280757-66280776 | MS.gene022285:intron | 35.0% | |
GAAGGGGACAAAAATTTAGA+TGG | + | chr3.3:66280218-66280237 | MS.gene022285:intron | 35.0% | |
GAATCCTAATGATATGACTG+GGG | + | chr3.3:66280758-66280777 | MS.gene022285:intron | 35.0% | |
GCGCCAATATGAAAAGAAAA+GGG | + | chr3.3:66280855-66280874 | MS.gene022285:intron | 35.0% | |
TACTACTGGTGGTAATAACA+TGG | + | chr3.3:66279131-66279150 | MS.gene022285:CDS | 35.0% | |
TCAAACTCTATTGCTACTAC+TGG | + | chr3.3:66279117-66279136 | MS.gene022285:CDS | 35.0% | |
TCCAGTTAAAATGCTGGATT+GGG | + | chr3.3:66280388-66280407 | MS.gene022285:intron | 35.0% | |
TCGAATCCTAATGATATGAC+TGG | + | chr3.3:66280756-66280775 | MS.gene022285:intron | 35.0% | |
TCTATGGAAGAAGATATACC+TGG | - | chr3.3:66281100-66281119 | None:intergenic | 35.0% | |
TCTGCTTCTCATTAGAAGAT+TGG | + | chr3.3:66279890-66279909 | MS.gene022285:intron | 35.0% | |
TGAGTAACCGGTTAAATGTA+GGG | + | chr3.3:66279552-66279571 | MS.gene022285:intron | 35.0% | |
TGCGCCAATATGAAAAGAAA+AGG | + | chr3.3:66280854-66280873 | MS.gene022285:intron | 35.0% | |
TTGAGTAACCGGTTAAATGT+AGG | + | chr3.3:66279551-66279570 | MS.gene022285:intron | 35.0% | |
TTTGACAAATGGGTGAATGA+TGG | + | chr3.3:66280936-66280955 | MS.gene022285:intron | 35.0% | |
! | ATTGTTAGATTGGTTGTGGA+AGG | + | chr3.3:66280200-66280219 | MS.gene022285:intron | 35.0% |
! | ATTGTTTCTTTCATCGGTCT+TGG | - | chr3.3:66280259-66280278 | None:intergenic | 35.0% |
! | GGCGCAATATTTTATGGTAA+AGG | - | chr3.3:66280840-66280859 | None:intergenic | 35.0% |
! | TGGCCCTTTTCTTTTCATAT+TGG | - | chr3.3:66280861-66280880 | None:intergenic | 35.0% |
! | TTGTTAGATTGGTTGTGGAA+GGG | + | chr3.3:66280201-66280220 | MS.gene022285:intron | 35.0% |
!!! | CGAGTGATAGTTTTGTTTTC+AGG | + | chr3.3:66280625-66280644 | MS.gene022285:intron | 35.0% |
AACCTTGCTGCTGATCAAAA+GGG | - | chr3.3:66281337-66281356 | None:intergenic | 40.0% | |
AACTCTATTGCTACTACTGG+TGG | + | chr3.3:66279120-66279139 | MS.gene022285:CDS | 40.0% | |
AAGATATACCTGGCGAACAA+CGG | - | chr3.3:66281090-66281109 | None:intergenic | 40.0% | |
ACAGGACCTAATTGAGTAAC+CGG | + | chr3.3:66279540-66279559 | MS.gene022285:intron | 40.0% | |
ATGGGTGAATGATGGTTTAC+AGG | + | chr3.3:66280944-66280963 | MS.gene022285:intron | 40.0% | |
ATTACATTTGCCACGGAACT+TGG | - | chr3.3:66281215-66281234 | None:intergenic | 40.0% | |
CCAGTTAAAATGCTGGATTG+GGG | + | chr3.3:66280389-66280408 | MS.gene022285:intron | 40.0% | |
GAGAAACTTAGGTCAGGATA+TGG | - | chr3.3:66281053-66281072 | None:intergenic | 40.0% | |
GGACAACATCTTGGTATTTC+TGG | - | chr3.3:66281194-66281213 | None:intergenic | 40.0% | |
GTAAAGGTTTCAAGGGAAAC+AGG | - | chr3.3:66280824-66280843 | None:intergenic | 40.0% | |
GTAAGTTACCAGCAACATCT+TGG | - | chr3.3:66279257-66279276 | None:intergenic | 40.0% | |
GTCCAGTTAAAATGCTGGAT+TGG | + | chr3.3:66280387-66280406 | MS.gene022285:intron | 40.0% | |
TAAATGGCAACCCCTATAAC+AGG | + | chr3.3:66280970-66280989 | MS.gene022285:CDS | 40.0% | |
TAAGAGACCTGAAATGGATG+AGG | + | chr3.3:66281262-66281281 | MS.gene022285:CDS | 40.0% | |
TACAAAGTAGGGGACGAATT+TGG | - | chr3.3:66279363-66279382 | None:intergenic | 40.0% | |
TACTAGGAATTGACGCTAAG+TGG | + | chr3.3:66279475-66279494 | MS.gene022285:intron | 40.0% | |
TCACGCAAGAAGTCATTGTT+TGG | + | chr3.3:66280462-66280481 | MS.gene022285:CDS | 40.0% | |
TCCTGATAAGAGACCTGAAA+TGG | + | chr3.3:66281256-66281275 | MS.gene022285:CDS | 40.0% | |
TTCAGGTCTCTTATCAGGAT+TGG | - | chr3.3:66281255-66281274 | None:intergenic | 40.0% | |
! | ATCTCTGAGAAACTTAGGTC+AGG | - | chr3.3:66281059-66281078 | None:intergenic | 40.0% |
! | GTAGAGCGTCTTACAAAGTA+GGG | - | chr3.3:66279374-66279393 | None:intergenic | 40.0% |
! | TAGAGCGTCTTACAAAGTAG+GGG | - | chr3.3:66279373-66279392 | None:intergenic | 40.0% |
! | TCCATTTCAGGTCTCTTATC+AGG | - | chr3.3:66281260-66281279 | None:intergenic | 40.0% |
! | TGTAGAGCGTCTTACAAAGT+AGG | - | chr3.3:66279375-66279394 | None:intergenic | 40.0% |
! | TGTTAGATTGGTTGTGGAAG+GGG | + | chr3.3:66280202-66280221 | MS.gene022285:intron | 40.0% |
!!! | GATTTGATGATGGGCTGTTT+TGG | + | chr3.3:66279853-66279872 | MS.gene022285:intron | 40.0% |
AAAGTAGGGGACGAATTTGG+CGG | - | chr3.3:66279360-66279379 | None:intergenic | 45.0% | |
AAGATGTTGTCCAAGTTCCG+TGG | + | chr3.3:66281202-66281221 | MS.gene022285:CDS | 45.0% | |
AAGCTGAAATTGCTGGACTC+AGG | + | chr3.3:66280432-66280451 | MS.gene022285:CDS | 45.0% | |
AATGATATGACTGGGGAGAC+TGG | + | chr3.3:66280765-66280784 | MS.gene022285:intron | 45.0% | |
ACATGGAGCAAAGAGAAGAG+TGG | + | chr3.3:66279148-66279167 | MS.gene022285:CDS | 45.0% | |
ACGAGCTAAGACACTCTTGA+TGG | - | chr3.3:66279196-66279215 | None:intergenic | 45.0% | |
ACGGAACTTGGACAACATCT+TGG | - | chr3.3:66281203-66281222 | None:intergenic | 45.0% | |
ATTGACACATCCAAAGGTGG+AGG | + | chr3.3:66281305-66281324 | MS.gene022285:CDS | 45.0% | |
ATTGGGGTGAAGAAGGTTAC+CGG | + | chr3.3:66280405-66280424 | MS.gene022285:CDS | 45.0% | |
CAACCTTGCTGCTGATCAAA+AGG | - | chr3.3:66281338-66281357 | None:intergenic | 45.0% | |
CAGCAATTTCAGCTTCTGTC+CGG | - | chr3.3:66280427-66280446 | None:intergenic | 45.0% | |
CATGGAGCAAAGAGAAGAGT+GGG | + | chr3.3:66279149-66279168 | MS.gene022285:CDS | 45.0% | |
CTTGGCCATCATAGAAACCA+CGG | - | chr3.3:66279239-66279258 | None:intergenic | 45.0% | |
GACGAATTTGGCGGTTTAGA+CGG | - | chr3.3:66279351-66279370 | None:intergenic | 45.0% | |
GACTGGTACACTTGGTTACA+TGG | + | chr3.3:66280782-66280801 | MS.gene022285:intron | 45.0% | |
GAGGCTATTGACACATCCAA+AGG | + | chr3.3:66281299-66281318 | MS.gene022285:CDS | 45.0% | |
GCAACTACCTCATCCATTTC+AGG | - | chr3.3:66281272-66281291 | None:intergenic | 45.0% | |
GCTATTGACACATCCAAAGG+TGG | + | chr3.3:66281302-66281321 | MS.gene022285:CDS | 45.0% | |
GTCTCCCCAGTCATATCATT+AGG | - | chr3.3:66280765-66280784 | None:intergenic | 45.0% | |
GTTCACCGTGGTTTCTATGA+TGG | + | chr3.3:66279231-66279250 | MS.gene022285:CDS | 45.0% | |
TATGATGGCCAAGATGTTGC+TGG | + | chr3.3:66279246-66279265 | MS.gene022285:CDS | 45.0% | |
TTCCATAAGCTCTCTCAGAG+AGG | + | chr3.3:66280092-66280111 | MS.gene022285:intron | 45.0% | |
! | ACTTTTGGTACTGTTCACCG+TGG | + | chr3.3:66279219-66279238 | MS.gene022285:CDS | 45.0% |
! | ATCCCTTTTGATCAGCAGCA+AGG | + | chr3.3:66281332-66281351 | MS.gene022285:CDS | 45.0% |
! | TAAGCTGATTAGCCCAACCA+GGG | - | chr3.3:66279962-66279981 | None:intergenic | 45.0% |
! | TTAAGCTGATTAGCCCAACC+AGG | - | chr3.3:66279963-66279982 | None:intergenic | 45.0% |
!! | ACTCTTGATGGTGAGGTTAG+AGG | - | chr3.3:66279184-66279203 | None:intergenic | 45.0% |
!! | ATCAAGAGTGTCTTAGCTCG+TGG | + | chr3.3:66279195-66279214 | MS.gene022285:CDS | 45.0% |
!! | CCCCAATCCAGCATTTTAAC+TGG | - | chr3.3:66280392-66280411 | None:intergenic | 45.0% |
!! | CTAAGACACTCTTGATGGTG+AGG | - | chr3.3:66279191-66279210 | None:intergenic | 45.0% |
!! | CTCTTGATGGTGAGGTTAGA+GGG | - | chr3.3:66279183-66279202 | None:intergenic | 45.0% |
!! | TCTTGATGGTGAGGTTAGAG+GGG | - | chr3.3:66279182-66279201 | None:intergenic | 45.0% |
ACTTGGTTACATGGCTCCTG+AGG | + | chr3.3:66280791-66280810 | MS.gene022285:intron | 50.0% | |
AGGGATCATACCTCCACCTT+TGG | - | chr3.3:66281318-66281337 | None:intergenic | 50.0% | |
CAGCAAGGTTGTCTCTGCTT+CGG | + | chr3.3:66281347-66281366 | MS.gene022285:CDS | 50.0% | |
CAGGGCAAACAACACCAACT+TGG | - | chr3.3:66279944-66279963 | None:intergenic | 50.0% | |
CGGACAGAAGCTGAAATTGC+TGG | + | chr3.3:66280425-66280444 | MS.gene022285:CDS | 50.0% | |
GGAAACAGGCTACAAACCTC+AGG | - | chr3.3:66280810-66280829 | None:intergenic | 50.0% | |
TGTGTCAATAGCCTCCAGCA+TGG | - | chr3.3:66281294-66281313 | None:intergenic | 50.0% | |
! | AGCCTCTCTGAGAGAGCTTA+TGG | - | chr3.3:66280097-66280116 | None:intergenic | 50.0% |
! | ATGCTGGATTGGGGTGAAGA+AGG | + | chr3.3:66280398-66280417 | MS.gene022285:CDS | 50.0% |
! | GTCTTAGCTCGTGGCACTTT+TGG | + | chr3.3:66279204-66279223 | MS.gene022285:CDS | 50.0% |
!! | CAAGTTGGTGTTGTTTGCCC+TGG | + | chr3.3:66279942-66279961 | MS.gene022285:intron | 50.0% |
!! | TGGTGTTGTTTGCCCTGGTT+GGG | + | chr3.3:66279947-66279966 | MS.gene022285:intron | 50.0% |
!! | TTGGTGTTGTTTGCCCTGGT+TGG | + | chr3.3:66279946-66279965 | MS.gene022285:intron | 50.0% |
ACTGGGGAGACTGGTACACT+TGG | + | chr3.3:66280774-66280793 | MS.gene022285:intron | 55.0% | |
GGATGAGGTAGTTGCCATGC+TGG | + | chr3.3:66281277-66281296 | MS.gene022285:CDS | 55.0% | |
TACTTCAGCCGTTGTTCGCC+AGG | + | chr3.3:66281079-66281098 | MS.gene022285:CDS | 55.0% | |
TGAGGTAGTTGCCATGCTGG+AGG | + | chr3.3:66281280-66281299 | MS.gene022285:CDS | 55.0% | |
!! | TCTGCTTCGGTAAGCGCCGA+GGG | + | chr3.3:66281360-66281379 | MS.gene022285:CDS | 60.0% |
! | CTCTGCTTCGGTAAGCGCCG+AGG | + | chr3.3:66281359-66281378 | MS.gene022285:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.3 | gene | 66279003 | 66281388 | 66279003 | ID=MS.gene022285 |
chr3.3 | mRNA | 66279003 | 66281388 | 66279003 | ID=MS.gene022285.t1;Parent=MS.gene022285 |
chr3.3 | exon | 66279003 | 66279267 | 66279003 | ID=MS.gene022285.t1.exon1;Parent=MS.gene022285.t1 |
chr3.3 | CDS | 66279003 | 66279267 | 66279003 | ID=cds.MS.gene022285.t1;Parent=MS.gene022285.t1 |
chr3.3 | exon | 66280393 | 66280514 | 66280393 | ID=MS.gene022285.t1.exon2;Parent=MS.gene022285.t1 |
chr3.3 | CDS | 66280393 | 66280514 | 66280393 | ID=cds.MS.gene022285.t1;Parent=MS.gene022285.t1 |
chr3.3 | exon | 66280966 | 66281100 | 66280966 | ID=MS.gene022285.t1.exon3;Parent=MS.gene022285.t1 |
chr3.3 | CDS | 66280966 | 66281100 | 66280966 | ID=cds.MS.gene022285.t1;Parent=MS.gene022285.t1 |
chr3.3 | exon | 66281182 | 66281388 | 66281182 | ID=MS.gene022285.t1.exon4;Parent=MS.gene022285.t1 |
chr3.3 | CDS | 66281182 | 66281388 | 66281182 | ID=cds.MS.gene022285.t1;Parent=MS.gene022285.t1 |
Gene Sequence |
Protein sequence |