AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene022339

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene022339.t1 MTR_3g077110 94.842 349 16 2 1 347 1 349 0.0 655
MS.gene022339.t1 MTR_1g112760 67.559 299 23 6 3 300 4 229 1.47e-128 367
MS.gene022339.t1 MTR_4g105130 54.872 390 104 15 1 347 1 361 3.13e-118 346
MS.gene022339.t1 MTR_1g085040 82.946 129 22 0 1 129 1 129 1.22e-76 240
MS.gene022339.t1 MTR_7g110830 78.676 136 27 1 1 134 1 136 1.77e-76 239
MS.gene022339.t1 MTR_1g085640 70.861 151 41 1 1 148 1 151 4.82e-74 234
MS.gene022339.t1 MTR_7g111290 82.090 134 24 0 1 134 1 134 4.90e-71 226
MS.gene022339.t1 MTR_8g017440 52.885 208 89 3 1 199 1 208 2.28e-68 218
MS.gene022339.t1 MTR_2g099740 76.000 125 30 0 1 125 1 125 2.67e-66 214
MS.gene022339.t1 MTR_8g017540 51.402 214 94 4 1 205 47 259 1.61e-65 212
MS.gene022339.t1 MTR_2g064160 72.222 126 34 1 1 126 1 125 1.72e-64 207
MS.gene022339.t1 MTR_8g017500 49.763 211 96 4 1 202 1 210 3.06e-64 207
MS.gene022339.t1 MTR_3g097450 66.929 127 42 0 1 127 1 127 2.79e-61 198
MS.gene022339.t1 MTR_8g017390 76.271 118 27 1 1 117 1 118 3.43e-60 201
MS.gene022339.t1 MTR_8g017340 69.403 134 39 2 1 133 1 133 3.51e-60 201
MS.gene022339.t1 MTR_8g095390 65.891 129 44 0 1 129 1 129 7.59e-60 195
MS.gene022339.t1 MTR_5g079670 64.800 125 44 0 3 127 2 126 1.98e-59 191
MS.gene022339.t1 MTR_8g098860 69.748 119 36 0 1 119 1 119 2.29e-59 194
MS.gene022339.t1 MTR_4g073420 62.791 129 48 0 1 129 1 129 4.82e-59 192
MS.gene022339.t1 MTR_8g017350 68.657 134 40 2 1 133 1 133 4.92e-59 201
MS.gene022339.t1 MTR_4g478180 61.940 134 51 0 1 134 2 135 6.13e-59 194
MS.gene022339.t1 MTR_5g078140 65.891 129 44 0 1 129 1 129 1.91e-58 192
MS.gene022339.t1 MTR_6g009430 46.939 196 95 2 1 195 1 188 3.37e-58 191
MS.gene022339.t1 MTR_5g007370 66.400 125 42 0 12 136 12 136 6.17e-58 189
MS.gene022339.t1 MTR_3g065440 64.662 133 47 0 1 133 1 133 6.75e-58 190
MS.gene022339.t1 MTR_4g102380 63.566 129 47 0 1 129 1 129 7.37e-58 189
MS.gene022339.t1 MTR_4g082230 66.406 128 43 0 1 128 1 128 9.26e-58 192
MS.gene022339.t1 MTR_3g074520 59.559 136 55 0 1 136 1 136 1.81e-57 190
MS.gene022339.t1 MTR_4g082290 67.188 128 42 0 1 128 1 128 1.95e-57 191
MS.gene022339.t1 MTR_7g011170 53.448 174 67 1 1 174 1 160 2.77e-57 188
MS.gene022339.t1 MTR_4g065017 79.245 106 22 0 11 116 16 121 4.83e-57 188
MS.gene022339.t1 MTR_5g010020 71.818 110 31 0 1 110 1 110 8.55e-57 188
MS.gene022339.t1 MTR_5g029840 63.281 128 47 0 1 128 1 128 9.78e-57 187
MS.gene022339.t1 MTR_6g012690 65.625 128 44 0 1 128 1 128 1.16e-56 188
MS.gene022339.t1 MTR_3g028740 77.778 108 24 0 9 116 19 126 1.97e-56 187
MS.gene022339.t1 MTR_7g076740 65.385 130 44 1 1 129 1 130 2.10e-56 186
MS.gene022339.t1 MTR_2g097910 78.095 105 23 0 12 116 20 124 2.13e-56 186
MS.gene022339.t1 MTR_8g031360 49.756 205 86 4 1 201 1 192 3.89e-56 185
MS.gene022339.t1 MTR_2g089620 60.902 133 52 0 1 133 1 133 6.76e-56 185
MS.gene022339.t1 MTR_2g011660 62.016 129 48 1 1 128 1 129 3.02e-55 184
MS.gene022339.t1 MTR_3g461490 63.566 129 47 0 1 129 1 129 3.23e-55 183
MS.gene022339.t1 MTR_4g091490 59.259 135 54 1 1 134 1 135 1.17e-54 183
MS.gene022339.t1 MTR_6g055910 44.304 237 113 6 9 232 11 241 3.62e-54 179
MS.gene022339.t1 MTR_1g100667 69.421 121 36 1 9 129 10 129 1.25e-53 177
MS.gene022339.t1 MTR_4g485530 61.111 126 49 0 1 126 1 126 4.44e-53 174
MS.gene022339.t1 MTR_3g083540 62.097 124 47 0 6 129 35 158 3.47e-52 175
MS.gene022339.t1 MTR_7g115650 61.157 121 47 0 1 121 1 121 1.66e-51 170
MS.gene022339.t1 MTR_1g100653 63.559 118 43 0 1 118 1 118 2.24e-51 172
MS.gene022339.t1 MTR_2g089450 64.035 114 40 1 5 118 6 118 4.68e-51 170
MS.gene022339.t1 MTR_7g096930 63.793 116 42 0 1 116 1 116 4.01e-50 169
MS.gene022339.t1 MTR_1g076150 60.145 138 52 1 1 135 1 138 5.00e-50 168
MS.gene022339.t1 MTR_4g125520 52.258 155 65 2 1 152 1 149 6.37e-50 169
MS.gene022339.t1 MTR_0251s0050 61.261 111 43 0 6 116 7 117 1.63e-49 167
MS.gene022339.t1 MTR_0008s0390 60.714 112 44 0 6 117 7 118 1.45e-48 164
MS.gene022339.t1 MTR_1g017140 38.267 277 137 8 1 258 1 262 8.01e-48 164
MS.gene022339.t1 MTR_5g042030 61.538 117 45 0 12 128 7 123 1.52e-47 162
MS.gene022339.t1 MTR_1g043080 61.538 117 45 0 1 117 1 117 2.42e-47 161
MS.gene022339.t1 MTR_2g089420 64.486 107 38 0 12 118 11 117 4.95e-47 165
MS.gene022339.t1 MTR_0008s0470 58.929 112 46 0 6 117 7 118 1.05e-46 160
MS.gene022339.t1 MTR_1g043050 62.393 117 44 0 1 117 1 117 1.22e-46 159
MS.gene022339.t1 MTR_1g017000 55.085 118 52 1 1 117 1 118 2.82e-46 158
MS.gene022339.t1 MTR_8g027345 60.169 118 47 0 1 118 1 118 4.13e-46 159
MS.gene022339.t1 MTR_4g121460 62.069 116 44 0 1 116 1 116 5.03e-46 160
MS.gene022339.t1 MTR_7g117730 59.664 119 48 0 1 119 1 119 1.07e-45 157
MS.gene022339.t1 MTR_7g010210 46.524 187 90 3 1 187 1 177 1.22e-45 158
MS.gene022339.t1 MTR_5g014990 50.327 153 72 3 1 151 1 151 1.60e-45 157
MS.gene022339.t1 MTR_7g010210 45.989 187 91 2 1 187 1 177 1.65e-45 156
MS.gene022339.t1 MTR_2g034790 61.207 116 45 0 1 116 1 116 2.94e-45 157
MS.gene022339.t1 MTR_4g057635 60.169 118 46 1 1 117 1 118 4.76e-45 157
MS.gene022339.t1 MTR_2g067420 61.468 109 42 0 2 110 4 112 1.75e-44 155
MS.gene022339.t1 MTR_3g103570 56.780 118 50 1 1 117 1 118 1.24e-43 154
MS.gene022339.t1 MTR_8g020490 46.154 169 83 4 10 174 6 170 2.85e-43 150
MS.gene022339.t1 MTR_0140s0030 54.688 128 52 1 1 122 2 129 6.87e-43 151
MS.gene022339.t1 MTR_0489s0020 54.688 128 52 1 1 122 2 129 6.87e-43 151
MS.gene022339.t1 MTR_7g102110 55.932 118 51 1 1 117 1 118 1.20e-42 149
MS.gene022339.t1 MTR_7g087130 56.349 126 53 1 1 124 1 126 1.62e-42 150
MS.gene022339.t1 MTR_4g100720 60.748 107 42 0 9 115 10 116 5.83e-42 144
MS.gene022339.t1 MTR_2g095520 59.459 111 44 1 1 110 1 111 7.80e-42 148
MS.gene022339.t1 MTR_7g111290 79.348 92 19 0 43 134 1 92 9.71e-42 149
MS.gene022339.t1 MTR_3g039990 58.475 118 49 0 1 118 2 119 1.14e-41 147
MS.gene022339.t1 MTR_6g090405 56.780 118 50 1 1 117 1 118 1.68e-41 145
MS.gene022339.t1 MTR_1g073170 60.000 105 42 0 11 115 19 123 2.26e-41 145
MS.gene022339.t1 MTR_4g097570 59.091 110 44 1 1 109 1 110 5.21e-41 145
MS.gene022339.t1 MTR_1g045610 61.165 103 40 0 13 115 22 124 8.18e-41 144
MS.gene022339.t1 MTR_4g097570 58.559 111 44 2 1 109 1 111 3.75e-40 143
MS.gene022339.t1 MTR_7g035075 55.085 118 51 1 1 116 1 118 4.78e-40 140
MS.gene022339.t1 MTR_6g012180 59.091 110 45 0 1 110 1 110 6.21e-40 143
MS.gene022339.t1 MTR_7g109320 62.069 116 44 0 1 116 1 116 8.00e-40 144
MS.gene022339.t1 MTR_3g052430 57.273 110 46 1 12 121 41 149 9.35e-40 147
MS.gene022339.t1 MTR_1g062940 45.517 145 73 1 12 156 6 144 9.97e-40 140
MS.gene022339.t1 MTR_0063s0090 58.095 105 44 0 9 113 9 113 1.16e-39 140
MS.gene022339.t1 MTR_0008s0280 56.604 106 46 0 9 114 9 114 1.50e-39 140
MS.gene022339.t1 MTR_4g128670 55.856 111 48 1 1 110 1 111 1.51e-39 143
MS.gene022339.t1 MTR_1g021230 59.615 104 42 0 12 115 57 160 1.77e-39 145
MS.gene022339.t1 MTR_6g006030 54.237 118 52 1 1 116 1 118 1.87e-39 139
MS.gene022339.t1 MTR_3g052450 56.364 110 47 1 12 121 40 148 2.35e-39 146
MS.gene022339.t1 MTR_3g045430 50.806 124 61 0 6 129 7 130 5.72e-39 140
MS.gene022339.t1 MTR_8g042410 58.654 104 43 0 12 115 37 140 7.87e-39 145
MS.gene022339.t1 MTR_1g086530 53.153 111 52 0 12 122 33 143 8.61e-39 139
MS.gene022339.t1 MTR_1g110460 50.400 125 61 1 9 133 23 146 1.34e-38 139
MS.gene022339.t1 MTR_4g063100 54.206 107 49 0 13 119 8 114 2.66e-38 137
MS.gene022339.t1 MTR_3g011610 57.692 104 44 0 12 115 37 140 3.10e-38 143
MS.gene022339.t1 MTR_5g079120 46.429 140 60 1 9 148 58 182 5.27e-38 138
MS.gene022339.t1 MTR_1g086510 57.692 104 44 0 12 115 21 124 6.31e-38 136
MS.gene022339.t1 MTR_0197s0010 58.000 100 42 0 17 116 6 105 3.09e-37 134
MS.gene022339.t1 MTR_2g096380 50.926 108 53 0 8 115 2 109 5.61e-37 133
MS.gene022339.t1 MTR_5g078800 55.556 108 48 0 10 117 5 112 1.15e-36 133
MS.gene022339.t1 MTR_5g078930 43.976 166 85 3 13 174 10 171 1.72e-36 131
MS.gene022339.t1 MTR_5g079290 48.333 120 62 0 2 121 7 126 1.90e-36 132
MS.gene022339.t1 MTR_0247s0040 56.863 102 44 0 12 113 7 108 1.99e-36 130
MS.gene022339.t1 MTR_5g078910 54.630 108 49 0 10 117 5 112 2.99e-36 133
MS.gene022339.t1 MTR_6g055910 55.652 115 43 3 43 149 16 130 6.11e-36 131
MS.gene022339.t1 MTR_0193s0090 42.945 163 90 2 12 174 7 166 1.28e-35 129
MS.gene022339.t1 MTR_8g060940 56.436 101 44 0 12 112 7 107 1.40e-35 130
MS.gene022339.t1 MTR_5g079220 51.818 110 53 0 10 119 19 128 2.71e-35 130
MS.gene022339.t1 MTR_2g088170 59.615 104 42 0 12 115 29 132 3.80e-35 133
MS.gene022339.t1 MTR_7g017260 46.763 139 55 2 12 148 25 146 1.03e-34 128
MS.gene022339.t1 MTR_5g078860 51.818 110 53 0 10 119 5 114 1.09e-34 129
MS.gene022339.t1 MTR_0001s0360 50.000 112 56 0 8 119 3 114 2.62e-34 127
MS.gene022339.t1 MTR_5g078950 51.923 104 50 0 10 113 5 108 1.38e-33 125
MS.gene022339.t1 MTR_1g083630 45.985 137 68 1 11 141 11 147 2.40e-33 130
MS.gene022339.t1 MTR_5g062790 50.893 112 53 2 13 123 10 120 3.04e-33 125
MS.gene022339.t1 MTR_8g006470 52.336 107 50 1 9 114 7 113 5.94e-33 124
MS.gene022339.t1 MTR_5g088640 50.893 112 53 2 13 123 13 123 2.32e-32 122
MS.gene022339.t1 MTR_5g088080 50.893 112 53 2 13 123 13 123 2.45e-32 122
MS.gene022339.t1 MTR_5g088150 50.893 112 53 2 13 123 13 123 2.45e-32 122
MS.gene022339.t1 MTR_5g488210 50.893 112 53 2 13 123 13 123 2.45e-32 122
MS.gene022339.t1 MTR_5g488170 50.893 112 53 2 13 123 13 123 2.58e-32 121
MS.gene022339.t1 MTR_2g033170 55.340 103 46 0 12 114 24 126 2.90e-32 123
MS.gene022339.t1 MTR_4g123040 54.630 108 48 1 12 119 24 130 3.59e-31 120
MS.gene022339.t1 MTR_4g029540 51.923 104 49 1 12 114 10 113 4.81e-30 116
MS.gene022339.t1 MTR_5g007300 62.500 80 30 0 9 88 61 140 5.66e-30 112
MS.gene022339.t1 MTR_5g088610 50.000 112 54 2 13 123 10 120 1.04e-29 117
MS.gene022339.t1 MTR_4g063100 59.740 77 31 0 43 119 9 85 5.23e-29 112
MS.gene022339.t1 MTR_5g049190 44.643 112 59 2 9 119 14 123 1.81e-28 111
MS.gene022339.t1 MTR_4g019370 45.865 133 68 3 14 145 38 167 2.03e-28 113
MS.gene022339.t1 MTR_3g463400 48.571 105 51 2 12 115 131 233 3.55e-28 114
MS.gene022339.t1 MTR_5g016510 46.341 123 63 2 14 135 5 125 5.11e-28 111
MS.gene022339.t1 MTR_5g070020 45.714 105 54 2 12 115 120 222 1.59e-27 111
MS.gene022339.t1 MTR_7g061330 50.909 110 51 2 8 116 107 214 1.64e-27 113
MS.gene022339.t1 MTR_7g461410 50.909 110 51 2 8 116 107 214 1.64e-27 113
MS.gene022339.t1 MTR_4g094982 51.961 102 48 1 14 115 5 105 2.02e-27 108
MS.gene022339.t1 MTR_7g061330 50.909 110 51 2 8 116 71 178 2.64e-27 112
MS.gene022339.t1 MTR_2g096380 58.904 73 30 0 43 115 18 90 1.16e-26 105
MS.gene022339.t1 MTR_4g128190 48.624 109 41 3 12 119 11 105 3.11e-26 105
MS.gene022339.t1 MTR_4g105660 42.857 112 61 2 9 119 175 284 3.39e-26 108
MS.gene022339.t1 MTR_1g085880 49.138 116 56 3 10 123 9 123 4.61e-26 103
MS.gene022339.t1 MTR_3g077650 42.609 115 61 3 8 119 173 285 1.49e-25 107
MS.gene022339.t1 MTR_3g110028 47.273 110 55 2 8 116 79 186 1.75e-25 108
MS.gene022339.t1 MTR_7g035350 43.750 112 55 3 3 113 219 323 2.94e-25 106
MS.gene022339.t1 MTR_3g101290 50.485 103 48 2 14 115 37 137 3.57e-25 101
MS.gene022339.t1 MTR_1g085770 49.138 116 56 3 10 123 9 123 3.62e-25 103
MS.gene022339.t1 MTR_1g057980 45.098 102 55 1 12 113 78 178 1.40e-24 102
MS.gene022339.t1 MTR_6g015455 50.485 103 48 2 14 115 5 105 1.83e-24 105
MS.gene022339.t1 MTR_6g074860 47.423 97 48 2 14 109 4 98 2.62e-24 99.8
MS.gene022339.t1 MTR_7g451170 42.718 103 56 2 14 115 191 291 3.38e-24 102
MS.gene022339.t1 MTR_7g037260 40.566 106 62 1 14 119 145 249 3.72e-24 101
MS.gene022339.t1 MTR_1g026870 45.455 110 57 2 8 116 79 186 6.84e-24 103
MS.gene022339.t1 MTR_5g041570 42.727 110 60 2 11 119 131 238 8.24e-24 102
MS.gene022339.t1 MTR_4g082040 43.925 107 57 2 14 119 105 209 1.56e-23 100
MS.gene022339.t1 MTR_4g088015 41.121 107 60 2 14 119 221 325 1.67e-23 100
MS.gene022339.t1 MTR_8g017480 75.000 52 13 0 1 52 1 52 8.52e-23 90.1
MS.gene022339.t1 MTR_6g027360 46.465 99 50 2 11 108 75 171 1.26e-22 96.7
MS.gene022339.t1 MTR_6g027340 44.000 100 53 2 11 109 13 110 5.90e-22 92.4
MS.gene022339.t1 MTR_5g082910 48.000 100 49 2 14 112 19 116 9.50e-22 94.0
MS.gene022339.t1 MTR_3g089045 44.860 107 56 2 14 119 16 120 9.55e-22 94.0
MS.gene022339.t1 MTR_7g450950 40.187 107 58 3 14 116 157 261 1.22e-21 94.4
MS.gene022339.t1 MTR_7g037130 38.182 110 64 2 14 120 145 253 3.88e-20 90.5
MS.gene022339.t1 MTR_6g027370 40.777 103 58 2 14 115 99 199 9.60e-20 89.4
MS.gene022339.t1 MTR_7g086960 38.760 129 74 3 14 141 89 213 1.10e-19 89.4
MS.gene022339.t1 MTR_5g010650 43.000 100 54 2 12 110 108 205 3.07e-19 89.0
MS.gene022339.t1 MTR_0023s0210 49.351 77 39 0 12 88 7 83 5.24e-19 80.9
MS.gene022339.t1 MTR_7g061550 32.432 148 89 3 17 153 10 157 1.59e-18 85.9
MS.gene022339.t1 MTR_6g055910 47.191 89 39 3 69 149 1 89 8.32e-18 81.3
MS.gene022339.t1 MTR_5g038910 35.354 99 63 1 17 115 29 126 2.36e-14 73.9
MS.gene022339.t1 MTR_5g038910 35.354 99 63 1 17 115 29 126 2.52e-14 73.9
MS.gene022339.t1 MTR_8g468380 33.884 121 78 2 2 122 10 128 1.41e-13 71.6
MS.gene022339.t1 MTR_4g063100 52.000 50 24 0 70 119 1 50 2.24e-12 65.5
MS.gene022339.t1 MTR_2g088730 61.538 39 15 0 70 108 34 72 1.31e-11 60.5
MS.gene022339.t1 MTR_2g096380 45.161 62 32 1 73 132 4 65 5.22e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene022339.t1 AT5G26660 82.576 132 23 0 1 132 1 132 1.47e-78 244
MS.gene022339.t1 AT1G57560 79.845 129 26 0 1 129 1 129 5.80e-75 234
MS.gene022339.t1 AT1G57560 79.845 129 26 0 1 129 1 129 6.79e-75 233
MS.gene022339.t1 AT4G01680 75.000 144 34 2 1 144 1 142 2.22e-74 230
MS.gene022339.t1 AT1G09540 73.793 145 35 2 1 145 1 142 9.43e-74 233
MS.gene022339.t1 AT4G01680 75.000 144 34 2 1 144 1 142 2.99e-73 230
MS.gene022339.t1 AT4G01680 69.231 156 34 3 1 144 1 154 1.43e-69 221
MS.gene022339.t1 AT3G13890 47.234 235 112 1 1 223 1 235 4.78e-65 210
MS.gene022339.t1 AT3G12720 71.429 126 35 1 1 126 12 136 4.50e-64 206
MS.gene022339.t1 AT3G13890 45.492 244 112 2 1 223 1 244 7.27e-62 202
MS.gene022339.t1 AT1G63910 64.662 133 47 0 1 133 1 133 2.29e-60 198
MS.gene022339.t1 AT4G34990 65.116 129 45 0 1 129 1 129 6.49e-60 194
MS.gene022339.t1 AT1G66230 61.111 144 51 1 1 144 1 139 4.53e-59 192
MS.gene022339.t1 AT5G65230 63.910 133 48 0 1 133 1 133 9.98e-59 192
MS.gene022339.t1 AT2G16720 64.567 127 45 0 1 127 1 127 1.81e-58 190
MS.gene022339.t1 AT4G12350 64.341 129 46 0 1 129 1 129 3.48e-58 190
MS.gene022339.t1 AT3G02940 59.701 134 54 0 1 134 1 134 3.50e-58 191
MS.gene022339.t1 AT5G10280 64.844 128 45 0 1 128 1 128 5.24e-58 191
MS.gene022339.t1 AT4G22680 60.690 145 56 1 1 145 1 144 6.07e-58 189
MS.gene022339.t1 AT4G21440 61.940 134 51 0 1 134 1 134 6.09e-58 191
MS.gene022339.t1 AT4G05100 63.566 129 46 1 1 128 1 129 7.11e-58 190
MS.gene022339.t1 AT4G38620 55.629 151 63 1 1 151 1 147 7.40e-58 189
MS.gene022339.t1 AT3G02940 59.701 134 54 0 1 134 1 134 7.94e-58 190
MS.gene022339.t1 AT3G02940 59.701 134 54 0 1 134 1 134 7.94e-58 190
MS.gene022339.t1 AT3G61250 65.116 129 45 0 1 129 1 129 1.28e-57 189
MS.gene022339.t1 AT5G15310 65.625 128 44 0 1 128 1 128 2.61e-57 186
MS.gene022339.t1 AT5G16600 65.891 129 44 0 1 129 1 129 2.67e-57 189
MS.gene022339.t1 AT5G16770 58.824 136 56 0 1 136 1 136 4.05e-57 188
MS.gene022339.t1 AT5G16770 58.824 136 56 0 1 136 1 136 4.05e-57 188
MS.gene022339.t1 AT5G15310 65.625 128 44 0 1 128 1 128 5.86e-57 188
MS.gene022339.t1 AT3G01140 66.142 127 43 0 1 127 1 127 6.71e-57 188
MS.gene022339.t1 AT5G15310 65.625 128 44 0 1 128 1 128 6.95e-57 187
MS.gene022339.t1 AT5G16770 58.824 136 56 0 1 136 1 136 8.10e-57 188
MS.gene022339.t1 AT5G16770 58.824 136 56 0 1 136 1 136 8.10e-57 188
MS.gene022339.t1 AT5G54230 63.359 131 48 0 1 131 1 131 1.49e-56 187
MS.gene022339.t1 AT5G56110 63.566 129 47 0 1 129 1 129 1.92e-56 186
MS.gene022339.t1 AT4G28110 60.938 128 50 0 1 128 1 128 2.08e-56 185
MS.gene022339.t1 AT1G22640 61.417 127 49 0 1 127 1 127 2.13e-56 184
MS.gene022339.t1 AT1G34670 63.281 128 47 0 1 128 1 128 4.32e-56 187
MS.gene022339.t1 AT4G09460 62.205 127 48 0 1 127 1 127 6.51e-56 182
MS.gene022339.t1 AT5G12870 76.147 109 26 0 10 118 16 124 8.02e-56 184
MS.gene022339.t1 AT4G17785 58.696 138 56 1 1 137 1 138 1.10e-55 186
MS.gene022339.t1 AT4G17785 58.696 138 56 1 1 137 1 138 1.11e-55 185
MS.gene022339.t1 AT5G14340 54.545 154 70 0 1 154 13 166 3.51e-55 182
MS.gene022339.t1 AT5G61420 54.861 144 65 0 1 144 1 144 4.02e-55 184
MS.gene022339.t1 AT3G01140 66.393 122 41 0 6 127 49 170 2.09e-54 183
MS.gene022339.t1 AT3G08500 75.926 108 26 0 9 116 27 134 2.45e-54 182
MS.gene022339.t1 AT5G60890 52.830 159 70 2 1 159 1 154 3.69e-54 180
MS.gene022339.t1 AT1G35515 59.231 130 53 0 1 130 1 130 8.26e-54 176
MS.gene022339.t1 AT1G74430 64.062 128 46 0 1 128 1 128 2.37e-53 177
MS.gene022339.t1 AT3G13540 61.240 129 49 1 6 133 17 145 2.58e-53 176
MS.gene022339.t1 AT5G62320 57.778 135 50 1 2 129 3 137 6.85e-53 175
MS.gene022339.t1 AT3G28470 64.844 128 45 0 1 128 1 128 7.83e-53 177
MS.gene022339.t1 AT5G07690 58.915 129 53 0 1 129 1 129 8.24e-53 177
MS.gene022339.t1 AT2G31180 57.447 141 59 1 1 141 1 140 8.39e-53 175
MS.gene022339.t1 AT1G18570 58.140 129 54 0 6 134 7 135 2.66e-52 177
MS.gene022339.t1 AT1G74080 58.015 131 55 0 1 131 1 131 1.00e-51 174
MS.gene022339.t1 AT5G07700 58.268 127 52 1 3 129 4 129 1.84e-51 174
MS.gene022339.t1 AT5G07700 58.268 127 52 1 3 129 4 129 1.84e-51 174
MS.gene022339.t1 AT1G06180 66.379 116 39 0 1 116 1 116 1.05e-50 169
MS.gene022339.t1 AT1G18710 57.143 133 57 0 1 133 1 133 3.40e-50 169
MS.gene022339.t1 AT3G48920 60.317 126 48 2 9 132 15 140 4.73e-49 166
MS.gene022339.t1 AT3G23250 62.069 116 44 0 1 116 1 116 1.29e-48 165
MS.gene022339.t1 AT1G56160 64.348 115 41 0 2 116 4 118 1.60e-48 165
MS.gene022339.t1 AT1G79180 62.393 117 44 0 2 118 4 120 4.18e-48 164
MS.gene022339.t1 AT5G26660 81.818 88 16 0 45 132 14 101 5.61e-48 164
MS.gene022339.t1 AT4G25560 66.055 109 37 0 10 118 8 116 8.65e-48 163
MS.gene022339.t1 AT5G52260 53.293 167 62 4 9 173 9 161 4.27e-47 160
MS.gene022339.t1 AT1G16490 61.739 115 44 0 2 116 4 118 2.50e-46 159
MS.gene022339.t1 AT3G12820 61.538 117 45 0 3 119 5 121 3.21e-46 157
MS.gene022339.t1 AT2G47460 62.069 116 44 0 1 116 1 116 6.33e-46 160
MS.gene022339.t1 AT3G62610 61.207 116 45 0 1 116 1 116 1.07e-45 159
MS.gene022339.t1 AT5G49330 55.224 134 59 1 1 133 1 134 1.40e-45 159
MS.gene022339.t1 AT5G57620 58.475 118 48 1 1 117 1 118 3.54e-45 157
MS.gene022339.t1 AT5G65790 58.333 120 49 1 1 119 1 120 3.84e-45 159
MS.gene022339.t1 AT5G23000 59.322 118 47 1 1 117 1 118 4.46e-45 157
MS.gene022339.t1 AT3G49690 58.333 120 49 1 1 119 1 120 1.47e-44 155
MS.gene022339.t1 AT5G14750 42.541 181 75 2 13 193 17 168 3.29e-44 151
MS.gene022339.t1 AT3G47600 59.322 118 48 0 1 118 1 118 1.54e-43 153
MS.gene022339.t1 AT5G35550 58.400 125 51 1 9 132 11 135 1.91e-43 151
MS.gene022339.t1 AT1G74650 59.829 117 47 0 1 117 1 117 3.56e-43 152
MS.gene022339.t1 AT5G62470 59.322 118 48 0 1 118 1 118 4.78e-43 152
MS.gene022339.t1 AT1G08810 58.197 122 51 0 1 122 1 122 6.11e-43 150
MS.gene022339.t1 AT5G40330 59.615 104 42 0 13 116 13 116 9.08e-43 148
MS.gene022339.t1 AT2G36890 52.756 127 59 1 1 126 1 127 1.62e-42 149
MS.gene022339.t1 AT3G27920 56.481 108 47 0 10 117 12 119 1.66e-42 147
MS.gene022339.t1 AT2G36890 52.756 127 59 1 1 126 42 168 2.06e-42 150
MS.gene022339.t1 AT3G01530 60.000 105 42 0 12 116 25 129 2.42e-42 146
MS.gene022339.t1 AT4G37780 56.557 122 51 2 1 120 1 122 6.97e-42 148
MS.gene022339.t1 AT5G62470 59.322 118 47 1 1 118 1 117 3.45e-41 147
MS.gene022339.t1 AT5G52600 51.145 131 55 1 9 130 9 139 3.52e-41 143
MS.gene022339.t1 AT1G79180 48.667 150 44 1 2 118 4 153 4.19e-41 147
MS.gene022339.t1 AT5G40350 56.364 110 48 0 11 120 16 125 4.88e-41 143
MS.gene022339.t1 AT5G55020 60.909 110 42 1 12 121 26 134 4.92e-41 150
MS.gene022339.t1 AT3G28910 57.627 118 50 0 1 118 1 118 1.02e-40 145
MS.gene022339.t1 AT3G24310 58.333 108 45 0 8 115 14 121 1.08e-40 144
MS.gene022339.t1 AT4G26930 59.091 110 44 1 12 121 19 127 1.27e-40 147
MS.gene022339.t1 AT4G13480 48.000 150 61 2 8 157 2 134 1.82e-40 143
MS.gene022339.t1 AT3G27810 54.054 111 51 0 11 121 19 129 7.75e-40 140
MS.gene022339.t1 AT1G48000 45.732 164 71 4 11 172 31 178 7.95e-40 141
MS.gene022339.t1 AT5G06100 58.654 104 43 0 12 115 32 135 1.53e-39 145
MS.gene022339.t1 AT5G06100 58.654 104 43 0 12 115 32 135 5.53e-39 145
MS.gene022339.t1 AT5G06100 58.654 104 43 0 12 115 32 135 5.53e-39 145
MS.gene022339.t1 AT5G06100 58.654 104 43 0 12 115 32 135 5.53e-39 145
MS.gene022339.t1 AT5G06100 58.654 104 43 0 12 115 32 135 5.53e-39 145
MS.gene022339.t1 AT2G26960 48.227 141 60 2 7 136 15 153 6.59e-39 143
MS.gene022339.t1 AT2G32460 50.794 126 51 1 8 122 2 127 1.32e-38 143
MS.gene022339.t1 AT2G32460 51.613 124 49 1 10 122 16 139 1.56e-38 143
MS.gene022339.t1 AT3G30210 60.784 102 40 0 13 114 28 129 1.58e-38 139
MS.gene022339.t1 AT1G68320 52.500 120 57 0 10 129 17 136 1.78e-38 139
MS.gene022339.t1 AT3G11440 55.769 104 46 0 12 115 41 144 2.39e-38 142
MS.gene022339.t1 AT1G25340 51.613 124 59 1 13 136 19 141 9.37e-38 137
MS.gene022339.t1 AT3G11440 55.769 104 46 0 12 115 41 144 1.02e-37 142
MS.gene022339.t1 AT3G11440 55.769 104 46 0 12 115 41 144 1.02e-37 142
MS.gene022339.t1 AT3G11440 55.769 104 46 0 12 115 41 144 1.02e-37 142
MS.gene022339.t1 AT5G59780 51.786 112 54 0 8 119 4 115 1.27e-37 135
MS.gene022339.t1 AT3G46130 53.271 107 50 0 13 119 10 116 7.62e-37 134
MS.gene022339.t1 AT1G66370 55.769 104 46 0 12 115 8 111 1.19e-35 130
MS.gene022339.t1 AT3G53200 52.252 111 53 0 9 119 6 116 1.76e-35 129
MS.gene022339.t1 AT2G47190 50.962 104 51 0 12 115 20 123 5.05e-35 129
MS.gene022339.t1 AT3G06490 58.252 103 43 0 12 114 19 121 2.95e-34 128
MS.gene022339.t1 AT1G66380 58.654 104 43 0 12 115 8 111 1.05e-33 122
MS.gene022339.t1 AT2G26950 45.299 117 63 1 5 121 9 124 2.98e-33 127
MS.gene022339.t1 AT3G12820 72.222 72 20 0 48 119 2 73 3.70e-33 122
MS.gene022339.t1 AT1G56650 50.388 129 56 1 12 132 8 136 4.41e-33 123
MS.gene022339.t1 AT3G60460 51.327 113 54 1 3 114 2 114 5.57e-33 124
MS.gene022339.t1 AT1G25340 49.194 124 57 2 13 136 19 136 5.94e-33 124
MS.gene022339.t1 AT1G25340 49.194 124 57 2 13 136 19 136 9.67e-33 124
MS.gene022339.t1 AT5G49620 55.340 103 46 0 12 114 26 128 4.66e-32 122
MS.gene022339.t1 AT1G66390 56.604 106 46 0 10 115 6 111 7.64e-32 120
MS.gene022339.t1 AT5G35550 63.736 91 32 1 43 132 48 138 1.77e-31 119
MS.gene022339.t1 AT5G14750 42.466 146 55 2 48 193 18 134 2.57e-31 116
MS.gene022339.t1 AT5G40350 59.211 76 31 0 45 120 5 80 4.58e-29 110
MS.gene022339.t1 AT1G18960 46.400 125 59 4 6 129 5 122 4.98e-29 114
MS.gene022339.t1 AT3G47600 54.737 95 39 1 24 118 22 112 8.94e-29 114
MS.gene022339.t1 AT5G49620 48.718 117 46 1 12 114 26 142 1.97e-28 112
MS.gene022339.t1 AT3G27810 55.844 77 34 0 45 121 4 80 3.60e-28 108
MS.gene022339.t1 AT1G22640 62.857 70 26 0 58 127 1 70 5.09e-28 108
MS.gene022339.t1 AT3G27785 43.966 116 60 3 3 115 176 289 8.07e-28 113
MS.gene022339.t1 AT3G46130 59.211 76 31 0 44 119 9 84 9.04e-28 108
MS.gene022339.t1 AT5G02320 34.694 245 130 9 8 233 61 294 1.38e-27 113
MS.gene022339.t1 AT5G02320 34.694 245 130 9 8 233 121 354 1.42e-27 113
MS.gene022339.t1 AT5G02320 34.694 245 130 9 8 233 121 354 1.42e-27 113
MS.gene022339.t1 AT3G46130 60.000 75 30 0 45 119 20 94 2.25e-27 108
MS.gene022339.t1 AT5G59780 60.000 75 30 0 45 119 20 94 2.89e-27 107
MS.gene022339.t1 AT1G71030 58.442 77 32 0 51 127 5 81 4.85e-27 105
MS.gene022339.t1 AT3G09370 49.541 109 52 2 8 115 129 235 6.85e-27 111
MS.gene022339.t1 AT3G09370 49.541 109 52 2 8 115 124 230 6.89e-27 111
MS.gene022339.t1 AT1G71030 58.442 77 32 0 51 127 19 95 7.38e-27 105
MS.gene022339.t1 AT4G18770 41.322 121 68 2 9 128 212 330 9.21e-27 110
MS.gene022339.t1 AT3G09370 49.541 109 52 2 8 115 137 243 1.22e-26 110
MS.gene022339.t1 AT3G53200 60.000 75 30 0 45 119 9 83 5.26e-26 103
MS.gene022339.t1 AT5G67300 49.515 103 49 2 14 115 6 106 7.13e-26 105
MS.gene022339.t1 AT2G39880 50.467 107 50 2 14 119 50 154 8.29e-26 106
MS.gene022339.t1 AT5G58850 43.243 111 60 2 10 119 101 209 4.74e-25 105
MS.gene022339.t1 AT4G37260 49.074 108 52 2 14 120 13 118 5.76e-25 103
MS.gene022339.t1 AT5G40360 40.566 106 62 1 9 114 153 257 1.06e-24 103
MS.gene022339.t1 AT1G66380 59.740 77 31 0 39 115 2 78 1.43e-24 96.7
MS.gene022339.t1 AT3G50060 48.544 103 50 2 14 115 6 106 1.48e-24 102
MS.gene022339.t1 AT2G23290 51.456 103 47 2 14 115 13 113 1.58e-24 102
MS.gene022339.t1 AT5G11510 46.364 110 56 2 8 116 75 182 1.82e-24 105
MS.gene022339.t1 AT5G11510 46.364 110 56 2 8 116 75 182 1.82e-24 105
MS.gene022339.t1 AT5G11510 46.364 110 56 2 8 116 75 182 1.82e-24 105
MS.gene022339.t1 AT1G69560 42.105 114 63 2 7 119 100 211 2.15e-24 102
MS.gene022339.t1 AT3G09230 48.571 105 51 2 14 117 55 157 2.46e-24 102
MS.gene022339.t1 AT5G11510 46.364 110 56 2 8 116 75 182 2.59e-24 104
MS.gene022339.t1 AT5G11510 46.364 110 56 2 8 116 75 182 2.60e-24 104
MS.gene022339.t1 AT1G17950 34.483 174 96 5 14 186 5 161 2.90e-24 100
MS.gene022339.t1 AT1G69560 42.105 114 63 2 7 119 116 227 3.06e-24 102
MS.gene022339.t1 AT5G11050 39.516 124 72 2 14 136 105 226 3.66e-24 102
MS.gene022339.t1 AT3G55730 51.456 103 47 2 14 115 56 156 4.08e-24 102
MS.gene022339.t1 AT3G23250 69.492 59 18 0 58 116 1 59 8.15e-24 98.2
MS.gene022339.t1 AT1G26780 43.810 105 56 2 12 115 96 198 2.37e-23 98.2
MS.gene022339.t1 AT4G32730 44.545 110 58 2 8 116 81 188 3.44e-23 101
MS.gene022339.t1 AT4G32730 44.545 110 58 2 8 116 81 188 3.68e-23 101
MS.gene022339.t1 AT4G32730 44.545 110 58 2 8 116 81 188 3.68e-23 101
MS.gene022339.t1 AT4G32730 44.545 110 58 2 8 116 81 188 3.68e-23 101
MS.gene022339.t1 AT4G32730 44.545 110 58 2 8 116 81 188 3.68e-23 101
MS.gene022339.t1 AT2G25230 39.683 126 70 3 9 133 21 141 3.89e-23 96.7
MS.gene022339.t1 AT1G26780 43.810 105 56 2 12 115 96 198 5.64e-23 98.6
MS.gene022339.t1 AT5G14750 38.235 136 55 2 58 193 1 107 4.11e-22 91.3
MS.gene022339.t1 AT5G14750 38.235 136 55 2 58 193 1 107 4.11e-22 91.3
MS.gene022339.t1 AT1G73410 43.689 103 55 2 14 115 6 106 2.03e-21 92.0
MS.gene022339.t1 AT3G29020 37.719 114 68 2 7 119 58 169 2.49e-21 91.7
MS.gene022339.t1 AT3G29020 37.719 114 68 2 7 119 60 171 3.36e-21 92.8
MS.gene022339.t1 AT1G73410 43.689 103 55 2 14 115 6 106 5.92e-21 89.7
MS.gene022339.t1 AT5G17800 41.176 102 59 1 14 115 93 193 1.08e-20 91.7
MS.gene022339.t1 AT1G66380 56.250 80 35 0 10 89 6 85 1.18e-20 86.3
MS.gene022339.t1 AT4G33450 38.393 112 66 2 5 115 10 119 2.30e-20 89.4
MS.gene022339.t1 AT4G00540 42.478 113 59 3 8 116 97 207 2.15e-19 89.0
MS.gene022339.t1 AT4G00540 42.478 113 59 3 8 116 95 205 3.53e-19 88.6
MS.gene022339.t1 AT5G61420 54.688 64 29 0 81 144 2 65 4.69e-18 83.6
MS.gene022339.t1 AT5G40430 36.283 113 68 3 9 120 49 158 6.48e-18 82.8
MS.gene022339.t1 AT2G37630 34.014 147 74 2 17 161 7 132 7.90e-18 84.0
MS.gene022339.t1 AT2G02820 36.190 105 66 1 17 121 33 136 1.27e-16 80.1
MS.gene022339.t1 AT2G02820 36.190 105 66 1 17 121 33 136 1.53e-16 80.9
MS.gene022339.t1 AT2G02820 36.190 105 66 1 17 121 33 136 1.97e-16 80.5
MS.gene022339.t1 AT1G14350 33.083 133 83 2 17 144 28 159 1.34e-15 77.8
MS.gene022339.t1 AT1G14350 33.083 133 83 2 17 144 28 159 1.34e-15 77.8
MS.gene022339.t1 AT5G39700 35.135 111 71 1 9 119 51 160 1.77e-15 74.3
MS.gene022339.t1 AT4G25560 62.000 50 19 0 69 118 1 50 9.09e-15 72.8
MS.gene022339.t1 AT1G74430 59.615 52 21 0 77 128 8 59 1.77e-14 71.6
MS.gene022339.t1 AT4G28110 65.854 41 14 0 88 128 4 44 2.48e-14 71.2
MS.gene022339.t1 AT5G15310 70.732 41 12 0 88 128 9 49 3.96e-14 71.6
MS.gene022339.t1 AT1G22640 62.500 40 15 0 88 127 16 55 4.84e-13 67.4
MS.gene022339.t1 AT5G14340 32.520 123 74 2 88 210 10 123 1.05e-12 66.2
MS.gene022339.t1 AT3G46130 55.319 47 21 0 73 119 4 50 1.38e-12 66.2
MS.gene022339.t1 AT5G59780 52.000 50 24 0 70 119 1 50 1.54e-12 65.5
MS.gene022339.t1 AT3G18100 33.333 96 63 1 13 108 545 639 1.64e-11 65.9
MS.gene022339.t1 AT3G18100 35.354 99 57 3 13 108 497 591 1.68e-11 65.9
MS.gene022339.t1 AT3G18100 33.333 96 63 1 13 108 384 478 1.96e-11 65.9
MS.gene022339.t1 AT3G18100 35.354 99 57 3 13 108 332 426 2.63e-11 65.1
MS.gene022339.t1 AT1G74650 65.854 41 14 0 77 117 1 41 6.30e-11 62.4
MS.gene022339.t1 AT3G28910 64.286 42 15 0 77 118 1 42 7.97e-11 62.0

Find 54 sgRNAs with CRISPR-Local

Find 63 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACCAAAGGAGAACTAAATT+TGG 0.235140 3.4:+74103232 None:intergenic
AAAAGCTTCTCATCTTCTTC+AGG 0.263770 3.4:+74104168 None:intergenic
TCTTCTGACAGTGACGTTAA+AGG 0.287115 3.4:+74103032 None:intergenic
TTCAATTACATAACCATGTT+TGG 0.314366 3.4:-74104147 MS.gene022339:CDS
TAATATTGATTCTCTTATAA+AGG 0.320611 3.4:-74103615 MS.gene022339:CDS
ATTAATCACTATAATATTAG+TGG 0.332071 3.4:-74103467 MS.gene022339:CDS
GACAGTGGCATTATCATTGA+TGG 0.336941 3.4:+74103578 None:intergenic
ATATTATTACCAGCTAGTTT+AGG 0.367192 3.4:+74104102 None:intergenic
CAATTTGAACAGAACCAGTT+TGG 0.373684 3.4:-74103335 MS.gene022339:CDS
TTCCAAATTTAGTTCTCCTT+TGG 0.379915 3.4:-74103234 MS.gene022339:CDS
TTCATGAAGCACTTGGAAAT+AGG 0.384419 3.4:-74103872 MS.gene022339:intron
AGAATCAATATTATTGATGA+AGG 0.405901 3.4:+74103625 None:intergenic
TGCTTGAATTGGTTCCAAAC+TGG 0.411620 3.4:+74103321 None:intergenic
TTTGCTTTAAAGAACAGAAA+TGG 0.411738 3.4:+74104214 None:intergenic
AACATGCCTCTCTTCAAATC+AGG 0.434013 3.4:+74103927 None:intergenic
TCATCAACAAGACAAGTTCA+TGG 0.452321 3.4:-74103103 MS.gene022339:CDS
TAAGATGGATCAACTATTTG+AGG 0.452664 3.4:-74103950 MS.gene022339:CDS
ATGAAGGGTTTATGAGTAGC+TGG 0.469478 3.4:+74103641 None:intergenic
AAAGCTTCTCATCTTCTTCA+GGG 0.470762 3.4:+74104169 None:intergenic
ATCTCATTATCTGTTCTCCC+TGG 0.474483 3.4:+74103719 None:intergenic
CCATGTTTGGTGTTGGCTGT+TGG 0.475716 3.4:-74104134 MS.gene022339:CDS
CAAATTGCAGCACAATTACC+AGG 0.477311 3.4:-74103737 MS.gene022339:CDS
ATGCAGGTGGATTAATCTCA+TGG 0.478338 3.4:-74103139 MS.gene022339:CDS
TGAGAAGAAAGTGCTTGAAT+TGG 0.484001 3.4:+74103310 None:intergenic
AATTCTTATGAAACCAACAT+TGG 0.495689 3.4:-74103417 MS.gene022339:CDS
GAAAGAGTTGTAGATTAAGA+TGG 0.500179 3.4:-74103965 MS.gene022339:CDS
TGTTCAAATTGTAATAGACT+TGG 0.511263 3.4:+74103347 None:intergenic
AGTTCAGTTCCTAAACTAGC+TGG 0.517760 3.4:-74104111 MS.gene022339:intron
ATCAATCTTCATGAAGCACT+TGG 0.519187 3.4:-74103879 MS.gene022339:CDS
TACATAACCATGTTTGGTGT+TGG 0.519759 3.4:-74104141 MS.gene022339:CDS
TTCTCTTATAAAGGAAGAGA+AGG 0.526947 3.4:-74103606 MS.gene022339:CDS
AATGGATCAAAATCCAATGT+TGG 0.534322 3.4:+74103404 None:intergenic
CTTGAACTTTCATTCACCAA+AGG 0.542251 3.4:+74103218 None:intergenic
ATGCTTAAATTGTAGTACAA+TGG 0.547362 3.4:+74103386 None:intergenic
GAATCAATATTATTGATGAA+GGG 0.548843 3.4:+74103626 None:intergenic
CCAACAGCCAACACCAAACA+TGG 0.550706 3.4:+74104134 None:intergenic
ATTTCAGGGTTGCAAAGGTG+TGG 0.550921 3.4:-74103987 MS.gene022339:intron
TTGAGGCCTGATTTGAAGAG+AGG 0.550938 3.4:-74103933 MS.gene022339:CDS
AAATTATTTCAGGGTTGCAA+AGG 0.557540 3.4:-74103992 MS.gene022339:intron
TGCTTCTGAGTATTCTTGTG+AGG 0.558944 3.4:+74103508 None:intergenic
AACATGATTAATGAAAATGC+AGG 0.582343 3.4:-74103155 MS.gene022339:CDS
TGCAGGTGGATTAATCTCAT+GGG 0.586240 3.4:-74103138 MS.gene022339:CDS
ATGATTAATGAAAATGCAGG+TGG 0.597024 3.4:-74103152 MS.gene022339:CDS
CATTTGATAATAATCACTCA+TGG 0.598608 3.4:+74103181 None:intergenic
AGGCATGTTCTCAAAACAAG+AGG 0.604781 3.4:-74103913 MS.gene022339:CDS
AAGCTTCTCATCTTCTTCAG+GGG 0.607980 3.4:+74104170 None:intergenic
AAGAAGAAACTAATGAAACA+AGG 0.624080 3.4:-74103671 MS.gene022339:CDS
AACAAGACAAGTTCATGGCA+AGG 0.635618 3.4:-74103098 MS.gene022339:CDS
AGAAGAAACTAATGAAACAA+GGG 0.641105 3.4:-74103670 MS.gene022339:CDS
AACTCTGAACTATTTAGACA+AGG 0.649610 3.4:+74103281 None:intergenic
GGTGGATTAATCTCATGGGA+AGG 0.658836 3.4:-74103134 MS.gene022339:CDS
TGAGGTTGAGAGTGAGACAG+TGG 0.680083 3.4:+74103563 None:intergenic
AAATTGCAGCACAATTACCA+GGG 0.707909 3.4:-74103736 MS.gene022339:CDS
TGTGTAGCTAGAATTCTCTG+AGG 0.728211 3.4:+74103545 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTAATCAAAATTATTTCA+GGG - chr3.4:74103207-74103226 MS.gene022339:CDS 10.0%
!! TTATTAATCAAAATTATTTC+AGG - chr3.4:74103206-74103225 MS.gene022339:CDS 10.0%
!!! TTAATAATTTCAAATTTTTC+AGG - chr3.4:74103442-74103461 MS.gene022339:CDS 10.0%
!! ATTAATCACTATAATATTAG+TGG - chr3.4:74103741-74103760 MS.gene022339:CDS 15.0%
!!! ATAATGAGATAAAAAACTTT+TGG - chr3.4:74103502-74103521 MS.gene022339:CDS 15.0%
!!! TAATATTGATTCTCTTATAA+AGG - chr3.4:74103593-74103612 MS.gene022339:CDS 15.0%
!! AAAAACTAAGAAAAGGTTTA+TGG - chr3.4:74103014-74103033 MS.gene022339:CDS 20.0%
!! AGAATCAATATTATTGATGA+AGG + chr3.4:74103586-74103605 None:intergenic 20.0%
!! GAATCAATATTATTGATGAA+GGG + chr3.4:74103585-74103604 None:intergenic 20.0%
!! GTTGTAAAGTAAAAAAGATA+AGG + chr3.4:74103182-74103201 None:intergenic 20.0%
!! TTAAAGCAAAAACTAAGAAA+AGG - chr3.4:74103007-74103026 MS.gene022339:CDS 20.0%
!!! ATAATTTCAAATTTTTCAGG+TGG - chr3.4:74103445-74103464 MS.gene022339:CDS 20.0%
!!! TAATTTCAAATTTTTCAGGT+GGG - chr3.4:74103446-74103465 MS.gene022339:CDS 20.0%
! AACATGATTAATGAAAATGC+AGG - chr3.4:74104053-74104072 MS.gene022339:intron 25.0%
! AAGAAGAAACTAATGAAACA+AGG - chr3.4:74103537-74103556 MS.gene022339:CDS 25.0%
! AATTCTTATGAAACCAACAT+TGG - chr3.4:74103791-74103810 MS.gene022339:intron 25.0%
! AGAAGAAACTAATGAAACAA+GGG - chr3.4:74103538-74103557 MS.gene022339:CDS 25.0%
! ATGCTTAAATTGTAGTACAA+TGG + chr3.4:74103825-74103844 None:intergenic 25.0%
! TGTTCAAATTGTAATAGACT+TGG + chr3.4:74103864-74103883 None:intergenic 25.0%
! TTCAATTACATAACCATGTT+TGG - chr3.4:74103061-74103080 MS.gene022339:CDS 25.0%
!! ATATTATTACCAGCTAGTTT+AGG + chr3.4:74103109-74103128 None:intergenic 25.0%
!! CATTTGATAATAATCACTCA+TGG + chr3.4:74104030-74104049 None:intergenic 25.0%
!!! TTTGCTTTAAAGAACAGAAA+TGG + chr3.4:74102997-74103016 None:intergenic 25.0%
AAATTATTTCAGGGTTGCAA+AGG - chr3.4:74103216-74103235 MS.gene022339:CDS 30.0%
AACTCTGAACTATTTAGACA+AGG + chr3.4:74103930-74103949 None:intergenic 30.0%
AATGGATCAAAATCCAATGT+TGG + chr3.4:74103807-74103826 None:intergenic 30.0%
ATGATTAATGAAAATGCAGG+TGG - chr3.4:74104056-74104075 MS.gene022339:intron 30.0%
GAAAGAGTTGTAGATTAAGA+TGG - chr3.4:74103243-74103262 MS.gene022339:CDS 30.0%
TAAGATGGATCAACTATTTG+AGG - chr3.4:74103258-74103277 MS.gene022339:CDS 30.0%
TTCTCTTATAAAGGAAGAGA+AGG - chr3.4:74103602-74103621 MS.gene022339:CDS 30.0%
!! TTCCAAATTTAGTTCTCCTT+TGG - chr3.4:74103974-74103993 MS.gene022339:CDS 30.0%
AAAAGCTTCTCATCTTCTTC+AGG + chr3.4:74103043-74103062 None:intergenic 35.0%
AAAGCTTCTCATCTTCTTCA+GGG + chr3.4:74103042-74103061 None:intergenic 35.0%
AAATTGCAGCACAATTACCA+GGG - chr3.4:74103472-74103491 MS.gene022339:CDS 35.0%
CAATTTGAACAGAACCAGTT+TGG - chr3.4:74103873-74103892 MS.gene022339:CDS 35.0%
CACCAAAGGAGAACTAAATT+TGG + chr3.4:74103979-74103998 None:intergenic 35.0%
CTTGAACTTTCATTCACCAA+AGG + chr3.4:74103993-74104012 None:intergenic 35.0%
TCATCAACAAGACAAGTTCA+TGG - chr3.4:74104105-74104124 MS.gene022339:intron 35.0%
! ATCAATCTTCATGAAGCACT+TGG - chr3.4:74103329-74103348 MS.gene022339:CDS 35.0%
! TTCATGAAGCACTTGGAAAT+AGG - chr3.4:74103336-74103355 MS.gene022339:CDS 35.0%
!! TACATAACCATGTTTGGTGT+TGG - chr3.4:74103067-74103086 MS.gene022339:CDS 35.0%
!! TGAGAAGAAAGTGCTTGAAT+TGG + chr3.4:74103901-74103920 None:intergenic 35.0%
AACAAGACAAGTTCATGGCA+AGG - chr3.4:74104110-74104129 MS.gene022339:intron 40.0%
AACATGCCTCTCTTCAAATC+AGG + chr3.4:74103284-74103303 None:intergenic 40.0%
AAGCTTCTCATCTTCTTCAG+GGG + chr3.4:74103041-74103060 None:intergenic 40.0%
AGGCATGTTCTCAAAACAAG+AGG - chr3.4:74103295-74103314 MS.gene022339:CDS 40.0%
AGTTCAGTTCCTAAACTAGC+TGG - chr3.4:74103097-74103116 MS.gene022339:CDS 40.0%
ATCTCATTATCTGTTCTCCC+TGG + chr3.4:74103492-74103511 None:intergenic 40.0%
ATGAAGGGTTTATGAGTAGC+TGG + chr3.4:74103570-74103589 None:intergenic 40.0%
CAAATTGCAGCACAATTACC+AGG - chr3.4:74103471-74103490 MS.gene022339:CDS 40.0%
GACAGTGGCATTATCATTGA+TGG + chr3.4:74103633-74103652 None:intergenic 40.0%
TCTTCTGACAGTGACGTTAA+AGG + chr3.4:74104179-74104198 None:intergenic 40.0%
TGCTTCTGAGTATTCTTGTG+AGG + chr3.4:74103703-74103722 None:intergenic 40.0%
TGTGTAGCTAGAATTCTCTG+AGG + chr3.4:74103666-74103685 None:intergenic 40.0%
! TGCTTGAATTGGTTCCAAAC+TGG + chr3.4:74103890-74103909 None:intergenic 40.0%
!! ATGCAGGTGGATTAATCTCA+TGG - chr3.4:74104069-74104088 MS.gene022339:intron 40.0%
!! TGCAGGTGGATTAATCTCAT+GGG - chr3.4:74104070-74104089 MS.gene022339:intron 40.0%
ATTTCAGGGTTGCAAAGGTG+TGG - chr3.4:74103221-74103240 MS.gene022339:CDS 45.0%
! TTGAGGCCTGATTTGAAGAG+AGG - chr3.4:74103275-74103294 MS.gene022339:CDS 45.0%
!! GGTGGATTAATCTCATGGGA+AGG - chr3.4:74104074-74104093 MS.gene022339:intron 45.0%
CCAACAGCCAACACCAAACA+TGG + chr3.4:74103077-74103096 None:intergenic 50.0%
TGAGGTTGAGAGTGAGACAG+TGG + chr3.4:74103648-74103667 None:intergenic 50.0%
!! CCATGTTTGGTGTTGGCTGT+TGG - chr3.4:74103074-74103093 MS.gene022339:CDS 50.0%


Chromosome Type Strat End Strand Name
chr3.4 gene 74102986 74104244 74102986 ID=MS.gene022339
chr3.4 mRNA 74102986 74104244 74102986 ID=MS.gene022339.t1;Parent=MS.gene022339
chr3.4 exon 74104112 74104244 74104112 ID=MS.gene022339.t1.exon1;Parent=MS.gene022339.t1
chr3.4 CDS 74104112 74104244 74104112 ID=cds.MS.gene022339.t1;Parent=MS.gene022339.t1
chr3.4 exon 74103873 74104002 74103873 ID=MS.gene022339.t1.exon2;Parent=MS.gene022339.t1
chr3.4 CDS 74103873 74104002 74103873 ID=cds.MS.gene022339.t1;Parent=MS.gene022339.t1
chr3.4 exon 74102986 74103766 74102986 ID=MS.gene022339.t1.exon3;Parent=MS.gene022339.t1
chr3.4 CDS 74102986 74103766 74102986 ID=cds.MS.gene022339.t1;Parent=MS.gene022339.t1
Gene Sequence

>MS.gene022339

ATGGGTCGCCATTTCTGTTCTTTAAAGCAAAAACTAAGAAAAGGTTTATGGTCCCCTGAAGAAGATGAGAAGCTTTTCAATTACATAACCATGTTTGGTGTTGGCTGTTGGAGTTCAGTTCCTAAACTAGCTGGTAATAATATTAATATATATACTTACATATCAAGTTATCAGCATATGAAAGAAAAAAATTCCTTATCTTTTTTACTTTACAACTCTCTTATTAATCAAAATTATTTCAGGGTTGCAAAGGTGTGGAAAGAGTTGTAGATTAAGATGGATCAACTATTTGAGGCCTGATTTGAAGAGAGGCATGTTCTCAAAACAAGAGGAAGATCTTATTATCAATCTTCATGAAGCACTTGGAAATAGGTGACATATATTATGTACATTGAAGAATATATAAAGTTGTTAAATGTTCAAACATGTTATTGTTAAATAATGCTTCAAAAATGATTAATAATTTCAAATTTTTCAGGTGGGCTCAAATTGCAGCACAATTACCAGGGAGAACAGATAATGAGATAAAAAACTTTTGGAATTCAAGTTTGAAGAAGAAACTAATGAAACAAGGGATTGATCCAGCTACTCATAAACCCTTCATCAATAATATTGATTCTCTTATAAAGGAAGAGAAGGAAAAACCATCAATGATAATGCCACTGTCTCACTCTCAACCTCAGAGAATTCTAGCTACACACACAATGCTAGAATCCTCACAAGAATACTCAGAAGCACTTCGAATGAGTGATTTGATTAATCACTATAATATTAGTGGATTAGCTTTAACAGAAGCTTCAAGAAAAATTCTTATGAAACCAACATTGGATTTTGATCCATTGTACTACAATTTAAGCATGAACAATTATTATCAGCCAAGTCTATTACAATTTGAACAGAACCAGTTTGGAACCAATTCAAGCACTTTCTTCTCATCAATGCCTTGTCTAAATAGTTCAGAGTTTTCAGACAATATCAACAACTCAGTTTCCAAATTTAGTTCTCCTTTGGTGAATGAAAGTTCAAGCAATAGTACTTCAACCATGAGTGATTATTATCAAATGAGCAACATGATTAATGAAAATGCAGGTGGATTAATCTCATGGGAAGGTGAAGAATTCATCAACAAGACAAGTTCATGGCAAGGACAGATGCTGAGTCATAATAATTCAATAGATTTCAGTACATATCCTTTAACGTCACTGTCAGAAGATCTAAGTAATATTGAAGCTAATTTTGATGTATTTCACCATTTATGA
Protein sequence

>MS.gene022339.t1

MGRHFCSLKQKLRKGLWSPEEDEKLFNYITMFGVGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGMFSKQEEDLIINLHEALGNRWAQIAAQLPGRTDNEIKNFWNSSLKKKLMKQGIDPATHKPFINNIDSLIKEEKEKPSMIMPLSHSQPQRILATHTMLESSQEYSEALRMSDLINHYNISGLALTEASRKILMKPTLDFDPLYYNLSMNNYYQPSLLQFEQNQFGTNSSTFFSSMPCLNSSEFSDNINNSVSKFSSPLVNESSSNSTSTMSDYYQMSNMINENAGGLISWEGEEFINKTSSWQGQMLSHNNSIDFSTYPLTSLSEDLSNIEANFDVFHHL