Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022453.t1 | XP_003602090.2 | 95.8 | 810 | 34 | 0 | 1 | 810 | 58 | 867 | 0.00E+00 | 1504.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022453.t1 | Q84W56 | 72.3 | 828 | 204 | 6 | 1 | 809 | 90 | 911 | 0.0e+00 | 1166.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022453.t1 | G7J5I7 | 95.8 | 810 | 34 | 0 | 1 | 810 | 58 | 867 | 0.0e+00 | 1504.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene022453.t1 | TF | Trihelix |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022453.t1 | MTR_3g089020 | 97.778 | 810 | 18 | 0 | 1 | 810 | 58 | 867 | 0.0 | 1630 |
| MS.gene022453.t1 | MTR_4g103770 | 86.880 | 625 | 78 | 2 | 1 | 625 | 62 | 682 | 0.0 | 1129 |
| MS.gene022453.t1 | MTR_7g014365 | 88.372 | 43 | 5 | 0 | 659 | 701 | 203 | 245 | 2.30e-15 | 80.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022453.t1 | AT5G63420 | 72.563 | 831 | 197 | 7 | 1 | 809 | 90 | 911 | 0.0 | 1195 |
Find 182 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCAAAAGATGCAAGATTTA+AGG | 0.149877 | 3.2:+67505465 | None:intergenic |
| GCCTTAAATCTTGCATCTTT+TGG | 0.181875 | 3.2:-67505466 | MS.gene022453:CDS |
| TTGGCTGGAAACACCTTAAA+AGG | 0.186376 | 3.2:-67503988 | MS.gene022453:CDS |
| TATTTGTTGGCATGTCTTTA+AGG | 0.202740 | 3.2:-67506535 | MS.gene022453:CDS |
| CAGGGGAATCGGATGAATTT+TGG | 0.207468 | 3.2:-67502830 | MS.gene022453:CDS |
| CAAATCTTTGTGGACATCTT+TGG | 0.240355 | 3.2:-67502484 | MS.gene022453:CDS |
| ATCCATGGATGAACATAAAA+AGG | 0.267555 | 3.2:-67503674 | MS.gene022453:CDS |
| ATTGGTGGTTTGGGTGAAAT+TGG | 0.278425 | 3.2:-67509570 | MS.gene022453:CDS |
| GATTCACTGGTTGTCCTTCC+AGG | 0.285382 | 3.2:+67506793 | None:intergenic |
| CAAGTGATTCATGCTCCTTC+AGG | 0.286343 | 3.2:+67504540 | None:intergenic |
| TTTCTTATAAATGTTGTATC+AGG | 0.286634 | 3.2:+67509160 | None:intergenic |
| CCATTACGTGTTCTTCCTAT+TGG | 0.296621 | 3.2:-67509588 | MS.gene022453:CDS |
| GAAGGCGATTTATCTGATTC+AGG | 0.300145 | 3.2:-67502849 | MS.gene022453:CDS |
| AAAGCTGCTGCCGATTTAAC+TGG | 0.300725 | 3.2:-67506673 | MS.gene022453:CDS |
| ATACAACATTTATAAGAAAA+TGG | 0.305949 | 3.2:-67509156 | MS.gene022453:CDS |
| CCTTGGAAAAGAAAATTTAC+AGG | 0.307438 | 3.2:-67504307 | MS.gene022453:intron |
| GATGTAGATTTGATGCAAAC+TGG | 0.345615 | 3.2:+67506710 | None:intergenic |
| TGAAAGGAAGGATGGCTCTC+TGG | 0.354049 | 3.2:-67502563 | MS.gene022453:CDS |
| CTTCTAAATGTTGATATTCC+AGG | 0.354594 | 3.2:+67503697 | None:intergenic |
| AATAGAAGGGTTCTTTCTAA+TGG | 0.365515 | 3.2:-67504339 | MS.gene022453:CDS |
| TGTTCTTCCTATTGGTGGTT+TGG | 0.367711 | 3.2:-67509580 | MS.gene022453:CDS |
| ATTTCCATTCAATTTGTTGC+CGG | 0.369154 | 3.2:+67501514 | None:intergenic |
| ATCTTTGGCACTTAAATATG+AGG | 0.370175 | 3.2:-67502469 | MS.gene022453:intron |
| ATCATATCGGTGCGTTGCCT+TGG | 0.376836 | 3.2:-67509090 | MS.gene022453:CDS |
| TTATTATATCAGGTATTTGT+TGG | 0.378839 | 3.2:-67506548 | MS.gene022453:intron |
| ATCGCAATGGCAATTACTTC+GGG | 0.381041 | 3.2:+67503787 | None:intergenic |
| GTTCTTCCTATTGGTGGTTT+GGG | 0.382494 | 3.2:-67509579 | MS.gene022453:CDS |
| TTTCACACTTGAGAAATAGA+AGG | 0.384172 | 3.2:-67504353 | MS.gene022453:CDS |
| GCATTTATTACCAGAGTTGA+TGG | 0.385749 | 3.2:+67506467 | None:intergenic |
| ATGCACCAGGTTATTAAGAA+TGG | 0.386575 | 3.2:-67504390 | MS.gene022453:intron |
| TTGTTTGCAGTGTGGTGGAC+TGG | 0.387215 | 3.2:+67503647 | None:intergenic |
| GAATGAATTGTATGCTTGTT+GGG | 0.394201 | 3.2:-67509548 | MS.gene022453:CDS |
| CAACTTTCTCCCAGTTAAAT+CGG | 0.401807 | 3.2:+67506663 | None:intergenic |
| CTAGTTCTTCGTTGTTCTGA+TGG | 0.406463 | 3.2:-67507634 | MS.gene022453:CDS |
| TAGATGGCATCATTGTGATT+AGG | 0.412496 | 3.2:-67504121 | MS.gene022453:intron |
| AATGAAAACTTACACACATC+TGG | 0.415170 | 3.2:-67505107 | MS.gene022453:CDS |
| AGAATGAGAATTGCATTAGA+TGG | 0.417290 | 3.2:-67504137 | MS.gene022453:CDS |
| ATTGGATCAACAATAGTTAT+GGG | 0.421279 | 3.2:-67505134 | MS.gene022453:CDS |
| GGCAAATCCCACGTTGGTCC+TGG | 0.424025 | 3.2:-67503715 | MS.gene022453:CDS |
| GATTGGATCAACAATAGTTA+TGG | 0.427638 | 3.2:-67505135 | MS.gene022453:CDS |
| CTATTCTTCACACTGGGGAT+TGG | 0.430987 | 3.2:-67507609 | MS.gene022453:CDS |
| ATCACACGGGACTCATTACC+AGG | 0.431628 | 3.2:+67505182 | None:intergenic |
| GAATTACCACAAGATGTCTA+TGG | 0.437596 | 3.2:-67503957 | MS.gene022453:CDS |
| GAGAAAGAGACCACTACAAC+TGG | 0.440855 | 3.2:-67502876 | MS.gene022453:CDS |
| CATTTGAGATAGAACCAATC+AGG | 0.444198 | 3.2:-67507687 | MS.gene022453:CDS |
| CTGGACAATGCAAATCTTTG+TGG | 0.444645 | 3.2:-67502494 | MS.gene022453:CDS |
| ACATGCATATCGTGGAGAAT+TGG | 0.445598 | 3.2:-67505084 | MS.gene022453:intron |
| GAATCACTTGGAAAATCAAC+TGG | 0.447489 | 3.2:-67504527 | MS.gene022453:CDS |
| TCTAATGGTTTCATTTCCCT+TGG | 0.447711 | 3.2:-67504324 | MS.gene022453:CDS |
| TATCGCAATGGCAATTACTT+CGG | 0.447759 | 3.2:+67503786 | None:intergenic |
| ACCAGAGTTGATGGGTCAAA+TGG | 0.450689 | 3.2:+67506476 | None:intergenic |
| TCATATCGGTGCGTTGCCTT+GGG | 0.452996 | 3.2:-67509089 | MS.gene022453:intron |
| GGAATGAATTGTATGCTTGT+TGG | 0.453098 | 3.2:-67509549 | MS.gene022453:CDS |
| TTACGTGTTCTTCCTATTGG+TGG | 0.453954 | 3.2:-67509585 | MS.gene022453:CDS |
| GAGATAAACACAAAATTGTC+TGG | 0.454789 | 3.2:-67503736 | MS.gene022453:CDS |
| TTTATCTGATTCAGGGGAAT+CGG | 0.455159 | 3.2:-67502841 | MS.gene022453:CDS |
| AGTGATGGTGACAAAGCATT+TGG | 0.457642 | 3.2:-67504188 | MS.gene022453:CDS |
| ATCAGACATTTCTTCAGACT+TGG | 0.457953 | 3.2:+67502692 | None:intergenic |
| CTGATTGGTTCTATCTCAAA+TGG | 0.459887 | 3.2:+67507688 | None:intergenic |
| ATTTCACCCAAACCACCAAT+AGG | 0.461698 | 3.2:+67509573 | None:intergenic |
| ATTGACGAGACACCACTTGA+TGG | 0.463031 | 3.2:-67507499 | MS.gene022453:CDS |
| GTTACAATAAGCAGATCCTT+AGG | 0.463234 | 3.2:+67505616 | None:intergenic |
| TCAACTGATGATGCAATGAA+TGG | 0.463811 | 3.2:+67502804 | None:intergenic |
| GATCTGCTTATTGTAACAAC+TGG | 0.465028 | 3.2:-67505610 | MS.gene022453:CDS |
| TCAACAAATGTGCTCTCACC+TGG | 0.467892 | 3.2:-67506811 | MS.gene022453:CDS |
| GATGGGATCAGCAGAAGTCC+TGG | 0.469354 | 3.2:-67502513 | MS.gene022453:CDS |
| CCTTGGTAAGTTTGAAAGCA+TGG | 0.473674 | 3.2:+67505437 | None:intergenic |
| ATGAATCGCATATCAGAGAT+TGG | 0.474239 | 3.2:-67505152 | MS.gene022453:CDS |
| TCTAATCAGGAGATCAAGAA+TGG | 0.475221 | 3.2:-67501604 | MS.gene022453:intron |
| CGATTTAACTGGGAGAAAGT+TGG | 0.476469 | 3.2:-67506662 | MS.gene022453:intron |
| AATCAGCTTCTTGACTTCCT+CGG | 0.476513 | 3.2:+67502623 | None:intergenic |
| CTCAGAGCTTGTTGGCTGAT+GGG | 0.478275 | 3.2:-67502530 | MS.gene022453:CDS |
| CACAAAGATTTGCATTGTCC+AGG | 0.480128 | 3.2:+67502495 | None:intergenic |
| TCTCAGAGCTTGTTGGCTGA+TGG | 0.481622 | 3.2:-67502531 | MS.gene022453:CDS |
| ATAGAATGAGTCACCCTGAT+TGG | 0.482517 | 3.2:+67507673 | None:intergenic |
| TTGGAAAATCAACTGGCATT+CGG | 0.486197 | 3.2:-67504520 | MS.gene022453:CDS |
| TCATCAGGTCATCCCAGCAT+TGG | 0.486824 | 3.2:-67508117 | MS.gene022453:intron |
| ATACAAAACAATATCTTCCT+TGG | 0.488079 | 3.2:+67505420 | None:intergenic |
| TCAAGAAGCTGATTGATTTG+CGG | 0.490229 | 3.2:-67502614 | MS.gene022453:CDS |
| CAATTCTCATTCTTTCATCA+AGG | 0.490742 | 3.2:+67504147 | None:intergenic |
| GACAAAGCATTTGGTACATC+CGG | 0.492657 | 3.2:-67504179 | MS.gene022453:CDS |
| ACAAAGAACAAGTTTGTCGC+TGG | 0.495185 | 3.2:-67507712 | MS.gene022453:CDS |
| GATGTCTATGGCTGGACAAA+GGG | 0.497228 | 3.2:-67503945 | MS.gene022453:CDS |
| AAGGCGATTTATCTGATTCA+GGG | 0.497243 | 3.2:-67502848 | MS.gene022453:CDS |
| CAAAAGTCCACTGGCTCACA+TGG | 0.497633 | 3.2:-67503866 | MS.gene022453:CDS |
| CATTCTATTCCTGACTGTTG+TGG | 0.499925 | 3.2:-67507658 | MS.gene022453:CDS |
| ACCTCTTGTTTGCAGTGTGG+TGG | 0.502821 | 3.2:+67503642 | None:intergenic |
| TTAGAAGCAGCTTGGAAGGA+TGG | 0.505273 | 3.2:-67506506 | MS.gene022453:CDS |
| AGGCACATTTCAGCTTCAAA+AGG | 0.507331 | 3.2:-67506748 | MS.gene022453:CDS |
| GATTTAAAGTTGTGAAAGGA+AGG | 0.508605 | 3.2:-67502575 | MS.gene022453:CDS |
| GAAAGGAAGGATGGCTCTCT+GGG | 0.509095 | 3.2:-67502562 | MS.gene022453:CDS |
| ACATTTCAGCTTCAAAAGGA+AGG | 0.510397 | 3.2:-67506744 | MS.gene022453:CDS |
| CTGAAGGAGCATGAATCACT+TGG | 0.511676 | 3.2:-67504539 | MS.gene022453:CDS |
| CGTTATATCCTCATTGATGC+TGG | 0.516389 | 3.2:-67509516 | MS.gene022453:CDS |
| AACAAGTATTCTCCATGTAC+AGG | 0.517823 | 3.2:+67504563 | None:intergenic |
| TGGCTGGAAACACCTTAAAA+GGG | 0.519920 | 3.2:-67503987 | MS.gene022453:CDS |
| AGAGATATCTCAGAGCTTGT+TGG | 0.522256 | 3.2:-67502538 | MS.gene022453:CDS |
| TGCATCTTCCTTTACAATGG+AGG | 0.526281 | 3.2:-67508075 | MS.gene022453:intron |
| TATTGATGCTTATGCACCTA+AGG | 0.528326 | 3.2:-67505632 | MS.gene022453:CDS |
| GACAGATTTAAAGTTGTGAA+AGG | 0.528331 | 3.2:-67502579 | MS.gene022453:CDS |
| GCATCAAATCTACATCGGAT+TGG | 0.529989 | 3.2:-67506703 | MS.gene022453:CDS |
| TTCATCAAGGAAGAGTTCAC+CGG | 0.530019 | 3.2:+67504160 | None:intergenic |
| TCAATTTGTCAGGTTATCCC+TGG | 0.531224 | 3.2:-67505200 | MS.gene022453:intron |
| CAGCATCAATGAGGATATAA+CGG | 0.531872 | 3.2:+67509517 | None:intergenic |
| GGACATACTTAGAAGCAGCT+TGG | 0.532316 | 3.2:-67506514 | MS.gene022453:CDS |
| ATCAACATTTAGAAGATCCA+TGG | 0.532606 | 3.2:-67503689 | MS.gene022453:CDS |
| TTGACGAGACACCACTTGAT+GGG | 0.533040 | 3.2:-67507498 | MS.gene022453:CDS |
| TCCATTTGACCCATCAACTC+TGG | 0.534282 | 3.2:-67506477 | MS.gene022453:intron |
| AGAACTAGTCCACAACAGTC+AGG | 0.535143 | 3.2:+67507649 | None:intergenic |
| TACCACAAGATGTCTATGGC+TGG | 0.535188 | 3.2:-67503953 | MS.gene022453:CDS |
| TCTTCACACTGGGGATTGGA+AGG | 0.536502 | 3.2:-67507605 | MS.gene022453:intron |
| CATGGTCATGAAGATCATAT+CGG | 0.538341 | 3.2:-67509103 | MS.gene022453:CDS |
| GGTGTATTGGAATCCAATGC+TGG | 0.538955 | 3.2:+67508104 | None:intergenic |
| GCCGAATACCTCCATTGTAA+AGG | 0.539763 | 3.2:+67508067 | None:intergenic |
| TAAAGTTGTGAAAGGAAGGA+TGG | 0.540086 | 3.2:-67502571 | MS.gene022453:CDS |
| ATCTGCCACAACAGATTCAC+TGG | 0.540628 | 3.2:+67506780 | None:intergenic |
| TTGTGGCAGATTCATTATTG+AGG | 0.541904 | 3.2:-67506768 | MS.gene022453:CDS |
| AGATTCTGTTCAACGTAGGA+TGG | 0.542555 | 3.2:-67509640 | MS.gene022453:CDS |
| ATTAAGAATGGAGAGATGCT+TGG | 0.543149 | 3.2:-67504378 | MS.gene022453:CDS |
| ATACTTAGAAGCAGCTTGGA+AGG | 0.544162 | 3.2:-67506510 | MS.gene022453:CDS |
| TTAGAGGAACTCTCTAAAGA+AGG | 0.550937 | 3.2:-67507454 | MS.gene022453:CDS |
| CAAAGAACAAGTTTGTCGCT+GGG | 0.552337 | 3.2:-67507711 | MS.gene022453:CDS |
| CATTTCAGCTTCAAAAGGAA+GGG | 0.552543 | 3.2:-67506743 | MS.gene022453:CDS |
| GCCATTGCGATAGAAAATCC+TGG | 0.555157 | 3.2:-67503775 | MS.gene022453:CDS |
| CTAATCAGGAGATCAAGAAT+GGG | 0.558723 | 3.2:-67501603 | MS.gene022453:intron |
| CTGTCCCGTCAAAAGTCCAC+TGG | 0.559295 | 3.2:-67503875 | MS.gene022453:CDS |
| CATTTATTACCAGAGTTGAT+GGG | 0.561091 | 3.2:+67506468 | None:intergenic |
| GTCGGAGATGTTGAGGAAGA+TGG | 0.562067 | 3.2:-67503833 | MS.gene022453:CDS |
| TCACAACTTTAAATCTGTCA+CGG | 0.562346 | 3.2:+67502583 | None:intergenic |
| AGATGTTGAGGAAGATGGTG+AGG | 0.567241 | 3.2:-67503828 | MS.gene022453:CDS |
| TTGGCAATATCTTGAGGACA+TGG | 0.567651 | 3.2:-67501563 | MS.gene022453:CDS |
| GAACTGTGTCGGAGATGTTG+AGG | 0.569522 | 3.2:-67503840 | MS.gene022453:CDS |
| ATGGAACTATTCTTCACACT+GGG | 0.571280 | 3.2:-67507615 | MS.gene022453:CDS |
| GTCCAGCCATAGACATCTTG+TGG | 0.573025 | 3.2:+67503951 | None:intergenic |
| ACCACTACAACTGGAGCTGA+AGG | 0.573383 | 3.2:-67502867 | MS.gene022453:CDS |
| CTCTAAAGAAGGAGTAACAT+TGG | 0.574233 | 3.2:-67507443 | MS.gene022453:intron |
| TTCACACTTGAGAAATAGAA+GGG | 0.575027 | 3.2:-67504352 | MS.gene022453:CDS |
| AGATGTCTATGGCTGGACAA+AGG | 0.582028 | 3.2:-67503946 | MS.gene022453:CDS |
| CAATGGTTATGTTTCACGAA+AGG | 0.585188 | 3.2:-67502763 | MS.gene022453:CDS |
| GCCTTCAGCTCCAGTTGTAG+TGG | 0.589034 | 3.2:+67502866 | None:intergenic |
| GTTCTTTCCATGTGAGCCAG+TGG | 0.589970 | 3.2:+67503859 | None:intergenic |
| AAGCTGCTGCCGATTTAACT+GGG | 0.591068 | 3.2:-67506672 | MS.gene022453:CDS |
| TGGTAATGAGTCCCGTGTGA+TGG | 0.593761 | 3.2:-67505180 | MS.gene022453:CDS |
| CCAATAGGAAGAACACGTAA+TGG | 0.600542 | 3.2:+67509588 | None:intergenic |
| AGCAGCTTGGAAGGATGGAA+AGG | 0.602363 | 3.2:-67506501 | MS.gene022453:CDS |
| TCACATGGAAAGAACTGTGT+CGG | 0.607611 | 3.2:-67503851 | MS.gene022453:CDS |
| CCATGCTTTCAAACTTACCA+AGG | 0.609185 | 3.2:-67505437 | MS.gene022453:CDS |
| GACAACCAGTGAATCTGTTG+TGG | 0.610763 | 3.2:-67506785 | MS.gene022453:CDS |
| TCCACCACACTGCAAACAAG+AGG | 0.611195 | 3.2:-67503643 | MS.gene022453:intron |
| GTCTGAAGAAATGTCTGATG+CGG | 0.611515 | 3.2:-67502688 | MS.gene022453:CDS |
| GATGATGGCATTGACACAGA+AGG | 0.613399 | 3.2:-67502909 | MS.gene022453:CDS |
| CAAATGTGCTCTCACCTGGA+AGG | 0.615112 | 3.2:-67506807 | MS.gene022453:CDS |
| GATGGAACTATTCTTCACAC+TGG | 0.616053 | 3.2:-67507616 | MS.gene022453:CDS |
| AATATCTTGAGGACATGGAA+AGG | 0.619122 | 3.2:-67501558 | MS.gene022453:CDS |
| TGGAGAATACTTGTTCCTGA+AGG | 0.627983 | 3.2:-67504555 | MS.gene022453:CDS |
| GTTACCTCTTGTTTGCAGTG+TGG | 0.633512 | 3.2:+67503639 | None:intergenic |
| ATGTAGATTTGATGCAAACT+GGG | 0.634137 | 3.2:+67506711 | None:intergenic |
| GATTCATCATTTCCATCACA+CGG | 0.639799 | 3.2:+67505168 | None:intergenic |
| ATTTGAGATAGAACCAATCA+GGG | 0.643383 | 3.2:-67507686 | MS.gene022453:CDS |
| ATTCATCATTTCCATCACAC+GGG | 0.645095 | 3.2:+67505169 | None:intergenic |
| AGGCGATTTATCTGATTCAG+GGG | 0.651319 | 3.2:-67502847 | MS.gene022453:CDS |
| ATTGTCTAGTGATGAAACAC+CGG | 0.652259 | 3.2:-67501533 | MS.gene022453:CDS |
| GTGTATTGGAATCCAATGCT+GGG | 0.657667 | 3.2:+67508105 | None:intergenic |
| AAATCAATCAAAGCAAACAA+TGG | 0.658404 | 3.2:-67502780 | MS.gene022453:CDS |
| TTGGATCAACAATAGTTATG+GGG | 0.659409 | 3.2:-67505133 | MS.gene022453:CDS |
| ACATCTGGACATGCATATCG+TGG | 0.659861 | 3.2:-67505092 | MS.gene022453:CDS |
| ACATGATACCAGCATCAATG+AGG | 0.660800 | 3.2:+67509508 | None:intergenic |
| AGTTTGCATCAAATCTACAT+CGG | 0.660918 | 3.2:-67506708 | MS.gene022453:CDS |
| TGGAAGATTCTGTTCAACGT+AGG | 0.664297 | 3.2:-67509644 | MS.gene022453:CDS |
| TTGATATTCCAGGACCAACG+TGG | 0.664721 | 3.2:+67503707 | None:intergenic |
| AAGATGGTGAGGAAGTACAG+TGG | 0.672062 | 3.2:-67503817 | MS.gene022453:CDS |
| GAAGCACTTGTTATAACACA+TGG | 0.674931 | 3.2:-67509121 | MS.gene022453:CDS |
| TGAGGAAGTACAGTGGTAAG+CGG | 0.677242 | 3.2:-67503810 | MS.gene022453:CDS |
| ATGCAGTTGAAATATAGTGA+TGG | 0.680617 | 3.2:-67504203 | MS.gene022453:intron |
| GCAAGATTTAAGGCAGCACG+TGG | 0.681321 | 3.2:+67505475 | None:intergenic |
| TGTACAGGAAGAAAATGTTG+CGG | 0.705564 | 3.2:+67504578 | None:intergenic |
| TGATATTCCAGGACCAACGT+GGG | 0.714591 | 3.2:+67503708 | None:intergenic |
| TTGTCTGGCAAATCCCACGT+TGG | 0.720381 | 3.2:-67503721 | MS.gene022453:CDS |
| CAACTTTAAATCTGTCACGG+AGG | 0.723247 | 3.2:+67502586 | None:intergenic |
| ATAGGAAGAACACGTAATGG+CGG | 0.726743 | 3.2:+67509591 | None:intergenic |
| TCACACGGGACTCATTACCA+GGG | 0.727328 | 3.2:+67505183 | None:intergenic |
| TGGAACTATTCTTCACACTG+GGG | 0.745314 | 3.2:-67507614 | MS.gene022453:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 67501522 | 67509667 | 67501522 | ID=MS.gene022453 |
| chr3.2 | mRNA | 67501522 | 67509667 | 67501522 | ID=MS.gene022453.t1;Parent=MS.gene022453 |
| chr3.2 | exon | 67509501 | 67509667 | 67509501 | ID=MS.gene022453.t1.exon1;Parent=MS.gene022453.t1 |
| chr3.2 | CDS | 67509501 | 67509667 | 67509501 | ID=cds.MS.gene022453.t1;Parent=MS.gene022453.t1 |
| chr3.2 | exon | 67509090 | 67509213 | 67509090 | ID=MS.gene022453.t1.exon2;Parent=MS.gene022453.t1 |
| chr3.2 | CDS | 67509090 | 67509213 | 67509090 | ID=cds.MS.gene022453.t1;Parent=MS.gene022453.t1 |
| chr3.2 | exon | 67508076 | 67508132 | 67508076 | ID=MS.gene022453.t1.exon3;Parent=MS.gene022453.t1 |
| chr3.2 | CDS | 67508076 | 67508132 | 67508076 | ID=cds.MS.gene022453.t1;Parent=MS.gene022453.t1 |
| chr3.2 | exon | 67507606 | 67507797 | 67507606 | ID=MS.gene022453.t1.exon4;Parent=MS.gene022453.t1 |
| chr3.2 | CDS | 67507606 | 67507797 | 67507606 | ID=cds.MS.gene022453.t1;Parent=MS.gene022453.t1 |
| chr3.2 | exon | 67507444 | 67507521 | 67507444 | ID=MS.gene022453.t1.exon5;Parent=MS.gene022453.t1 |
| chr3.2 | CDS | 67507444 | 67507521 | 67507444 | ID=cds.MS.gene022453.t1;Parent=MS.gene022453.t1 |
| chr3.2 | exon | 67506663 | 67506845 | 67506663 | ID=MS.gene022453.t1.exon6;Parent=MS.gene022453.t1 |
| chr3.2 | CDS | 67506663 | 67506845 | 67506663 | ID=cds.MS.gene022453.t1;Parent=MS.gene022453.t1 |
| chr3.2 | exon | 67506478 | 67506558 | 67506478 | ID=MS.gene022453.t1.exon7;Parent=MS.gene022453.t1 |
| chr3.2 | CDS | 67506478 | 67506558 | 67506478 | ID=cds.MS.gene022453.t1;Parent=MS.gene022453.t1 |
| chr3.2 | exon | 67505603 | 67505668 | 67505603 | ID=MS.gene022453.t1.exon8;Parent=MS.gene022453.t1 |
| chr3.2 | CDS | 67505603 | 67505668 | 67505603 | ID=cds.MS.gene022453.t1;Parent=MS.gene022453.t1 |
| chr3.2 | exon | 67505411 | 67505503 | 67505411 | ID=MS.gene022453.t1.exon9;Parent=MS.gene022453.t1 |
| chr3.2 | CDS | 67505411 | 67505503 | 67505411 | ID=cds.MS.gene022453.t1;Parent=MS.gene022453.t1 |
| chr3.2 | exon | 67505085 | 67505210 | 67505085 | ID=MS.gene022453.t1.exon10;Parent=MS.gene022453.t1 |
| chr3.2 | CDS | 67505085 | 67505210 | 67505085 | ID=cds.MS.gene022453.t1;Parent=MS.gene022453.t1 |
| chr3.2 | exon | 67504511 | 67504624 | 67504511 | ID=MS.gene022453.t1.exon11;Parent=MS.gene022453.t1 |
| chr3.2 | CDS | 67504511 | 67504624 | 67504511 | ID=cds.MS.gene022453.t1;Parent=MS.gene022453.t1 |
| chr3.2 | exon | 67504308 | 67504403 | 67504308 | ID=MS.gene022453.t1.exon12;Parent=MS.gene022453.t1 |
| chr3.2 | CDS | 67504308 | 67504403 | 67504308 | ID=cds.MS.gene022453.t1;Parent=MS.gene022453.t1 |
| chr3.2 | exon | 67504122 | 67504219 | 67504122 | ID=MS.gene022453.t1.exon13;Parent=MS.gene022453.t1 |
| chr3.2 | CDS | 67504122 | 67504219 | 67504122 | ID=cds.MS.gene022453.t1;Parent=MS.gene022453.t1 |
| chr3.2 | exon | 67503644 | 67504044 | 67503644 | ID=MS.gene022453.t1.exon14;Parent=MS.gene022453.t1 |
| chr3.2 | CDS | 67503644 | 67504044 | 67503644 | ID=cds.MS.gene022453.t1;Parent=MS.gene022453.t1 |
| chr3.2 | exon | 67502470 | 67502930 | 67502470 | ID=MS.gene022453.t1.exon15;Parent=MS.gene022453.t1 |
| chr3.2 | CDS | 67502470 | 67502930 | 67502470 | ID=cds.MS.gene022453.t1;Parent=MS.gene022453.t1 |
| chr3.2 | exon | 67501522 | 67501617 | 67501522 | ID=MS.gene022453.t1.exon16;Parent=MS.gene022453.t1 |
| chr3.2 | CDS | 67501522 | 67501617 | 67501522 | ID=cds.MS.gene022453.t1;Parent=MS.gene022453.t1 |
| Gene Sequence |
| Protein sequence |
