AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene022557

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene022557.t1 MTR_8g006470 94.118 289 15 1 1 289 1 287 0.0 511
MS.gene022557.t1 MTR_4g029540 56.277 231 91 6 1 227 1 225 1.06e-74 231
MS.gene022557.t1 MTR_3g052450 54.054 111 50 1 6 116 36 145 9.22e-39 142
MS.gene022557.t1 MTR_1g021230 56.075 107 46 1 10 116 57 162 4.36e-38 139
MS.gene022557.t1 MTR_3g052430 53.704 108 49 1 9 116 40 146 1.14e-37 140
MS.gene022557.t1 MTR_1g062940 54.783 115 46 3 1 114 1 110 8.71e-37 130
MS.gene022557.t1 MTR_8g042410 53.271 107 49 1 10 116 37 142 1.20e-36 137
MS.gene022557.t1 MTR_5g029840 50.862 116 54 2 6 121 8 120 2.87e-36 132
MS.gene022557.t1 MTR_4g105130 46.575 146 68 4 7 145 9 151 4.65e-36 132
MS.gene022557.t1 MTR_7g010210 51.852 108 51 1 6 113 8 114 5.45e-36 130
MS.gene022557.t1 MTR_7g010210 51.852 108 51 1 6 113 8 114 6.12e-36 131
MS.gene022557.t1 MTR_3g011610 49.533 107 53 1 10 116 37 142 1.06e-35 134
MS.gene022557.t1 MTR_7g110830 54.545 110 49 1 7 116 9 117 1.30e-35 131
MS.gene022557.t1 MTR_1g110460 44.167 120 66 1 5 124 21 139 1.43e-35 130
MS.gene022557.t1 MTR_6g012180 48.760 121 61 1 6 126 8 127 2.50e-35 129
MS.gene022557.t1 MTR_7g115650 52.885 104 48 1 10 113 12 114 2.61e-35 126
MS.gene022557.t1 MTR_1g085640 53.636 110 50 1 7 116 9 117 3.49e-35 130
MS.gene022557.t1 MTR_1g086530 46.154 117 62 1 4 120 27 142 6.99e-35 127
MS.gene022557.t1 MTR_4g478180 50.926 108 52 1 6 113 9 115 9.02e-35 129
MS.gene022557.t1 MTR_2g011660 51.376 109 51 2 10 117 13 120 1.45e-34 128
MS.gene022557.t1 MTR_7g035075 47.368 114 59 1 10 123 14 126 2.67e-34 124
MS.gene022557.t1 MTR_0140s0030 49.565 115 55 2 10 124 13 124 3.21e-34 127
MS.gene022557.t1 MTR_0489s0020 49.565 115 55 2 10 124 13 124 3.21e-34 127
MS.gene022557.t1 MTR_2g089620 49.107 112 55 2 6 116 8 118 3.48e-34 127
MS.gene022557.t1 MTR_1g086510 44.915 118 64 1 3 120 14 130 3.63e-34 125
MS.gene022557.t1 MTR_5g007370 49.541 109 54 1 5 113 7 114 3.68e-34 126
MS.gene022557.t1 MTR_1g112760 50.893 112 54 1 2 113 5 115 4.16e-34 124
MS.gene022557.t1 MTR_7g096930 42.424 132 75 1 10 141 12 142 5.34e-34 125
MS.gene022557.t1 MTR_2g089450 41.722 151 85 2 6 156 8 155 5.66e-34 124
MS.gene022557.t1 MTR_6g006030 49.541 109 53 2 10 117 14 121 6.14e-34 123
MS.gene022557.t1 MTR_2g096380 52.586 116 54 1 7 122 3 117 6.73e-34 124
MS.gene022557.t1 MTR_5g010020 50.926 108 52 1 2 109 4 110 7.75e-34 126
MS.gene022557.t1 MTR_2g067420 50.000 118 58 1 6 123 10 126 8.27e-34 125
MS.gene022557.t1 MTR_8g098860 48.696 115 58 1 2 116 4 117 1.12e-33 125
MS.gene022557.t1 MTR_2g099740 50.893 112 54 1 2 113 4 114 1.29e-33 127
MS.gene022557.t1 MTR_3g077110 51.327 113 52 2 7 119 9 118 1.38e-33 125
MS.gene022557.t1 MTR_7g076740 45.270 148 70 4 6 143 8 154 1.47e-33 124
MS.gene022557.t1 MTR_1g045610 49.565 115 57 1 2 116 13 126 1.79e-33 123
MS.gene022557.t1 MTR_8g017440 50.000 112 55 1 2 113 4 114 1.89e-33 125
MS.gene022557.t1 MTR_1g085040 50.435 115 56 1 2 116 4 117 2.07e-33 125
MS.gene022557.t1 MTR_1g043050 44.118 136 68 3 6 136 8 140 2.21e-33 122
MS.gene022557.t1 MTR_2g064160 50.000 112 55 1 2 113 3 113 2.64e-33 124
MS.gene022557.t1 MTR_8g017340 54.386 114 48 3 2 113 4 115 4.37e-33 127
MS.gene022557.t1 MTR_3g039990 48.673 113 56 2 10 121 13 124 4.50e-33 123
MS.gene022557.t1 MTR_7g087130 48.760 121 57 3 10 126 12 131 4.90e-33 124
MS.gene022557.t1 MTR_4g091490 49.541 109 53 2 10 117 13 120 5.02e-33 124
MS.gene022557.t1 MTR_3g074520 48.148 108 55 1 6 113 8 114 6.51e-33 124
MS.gene022557.t1 MTR_1g100667 51.327 113 53 2 11 122 14 125 9.06e-33 122
MS.gene022557.t1 MTR_8g017540 50.000 112 55 1 2 113 50 160 9.44e-33 124
MS.gene022557.t1 MTR_6g090405 41.722 151 78 4 6 148 8 156 1.18e-32 121
MS.gene022557.t1 MTR_1g073170 50.000 108 53 1 6 113 16 122 1.18e-32 121
MS.gene022557.t1 MTR_2g089420 37.989 179 97 4 6 175 7 180 1.25e-32 125
MS.gene022557.t1 MTR_6g012690 43.939 132 71 2 6 137 8 136 1.94e-32 122
MS.gene022557.t1 MTR_1g043080 41.985 131 74 2 6 135 8 137 2.48e-32 120
MS.gene022557.t1 MTR_4g082290 41.096 146 72 4 10 143 12 155 2.75e-32 123
MS.gene022557.t1 MTR_2g097910 49.138 116 56 2 10 125 20 132 2.99e-32 121
MS.gene022557.t1 MTR_8g095390 50.000 108 53 1 6 113 8 114 3.20e-32 121
MS.gene022557.t1 MTR_7g011170 47.706 109 55 2 10 117 12 119 4.53e-32 120
MS.gene022557.t1 MTR_1g076150 46.218 119 61 2 10 128 12 127 5.22e-32 119
MS.gene022557.t1 MTR_3g097450 42.000 150 75 3 6 144 8 156 6.77e-32 120
MS.gene022557.t1 MTR_8g031360 54.286 105 46 2 10 113 13 116 9.27e-32 119
MS.gene022557.t1 MTR_8g017500 48.214 112 57 1 2 113 4 114 9.50e-32 120
MS.gene022557.t1 MTR_8g017390 50.877 114 52 3 2 113 4 115 9.73e-32 122
MS.gene022557.t1 MTR_4g082230 41.096 146 72 4 10 143 12 155 1.30e-31 121
MS.gene022557.t1 MTR_0008s0280 41.667 132 76 1 6 137 8 138 1.59e-31 117
MS.gene022557.t1 MTR_1g100653 48.598 107 54 1 10 116 12 117 1.77e-31 119
MS.gene022557.t1 MTR_4g063100 53.211 109 48 2 7 113 4 111 1.81e-31 117
MS.gene022557.t1 MTR_2g095520 44.203 138 75 2 6 142 8 144 1.99e-31 119
MS.gene022557.t1 MTR_8g017350 52.632 114 50 3 2 113 4 115 2.24e-31 123
MS.gene022557.t1 MTR_4g094982 43.226 155 86 2 12 166 5 157 2.45e-31 118
MS.gene022557.t1 MTR_1g017000 48.624 109 54 2 6 113 8 115 3.57e-31 117
MS.gene022557.t1 MTR_0251s0050 50.943 106 50 2 10 114 13 117 3.80e-31 117
MS.gene022557.t1 MTR_4g065017 47.287 129 64 4 3 128 9 136 3.93e-31 119
MS.gene022557.t1 MTR_7g111290 52.941 102 47 1 7 108 9 109 4.15e-31 119
MS.gene022557.t1 MTR_0008s0390 43.609 133 73 2 10 141 13 144 6.49e-31 117
MS.gene022557.t1 MTR_5g079670 48.148 108 55 1 6 113 7 113 8.41e-31 115
MS.gene022557.t1 MTR_3g461490 48.148 108 55 1 6 113 8 114 1.26e-30 117
MS.gene022557.t1 MTR_4g073420 47.222 108 56 1 6 113 8 114 1.75e-30 116
MS.gene022557.t1 MTR_4g057635 48.624 109 54 2 6 113 8 115 2.33e-30 116
MS.gene022557.t1 MTR_0008s0470 46.341 123 64 2 10 131 13 134 2.51e-30 115
MS.gene022557.t1 MTR_0063s0090 47.748 111 57 1 6 116 8 117 2.60e-30 114
MS.gene022557.t1 MTR_6g055910 41.818 165 82 3 11 164 15 176 5.50e-30 114
MS.gene022557.t1 MTR_2g088170 54.206 107 48 1 10 116 29 134 6.39e-30 117
MS.gene022557.t1 MTR_5g016510 32.794 247 136 6 12 231 5 248 7.41e-30 115
MS.gene022557.t1 MTR_8g027345 44.262 122 66 2 10 130 12 132 8.18e-30 114
MS.gene022557.t1 MTR_3g028740 50.962 104 50 1 10 113 22 124 9.27e-30 115
MS.gene022557.t1 MTR_5g042030 46.789 109 56 2 10 117 7 114 1.43e-29 114
MS.gene022557.t1 MTR_1g017140 40.268 149 85 3 6 153 8 153 1.50e-29 114
MS.gene022557.t1 MTR_5g088080 47.706 109 55 2 10 117 12 119 1.88e-29 112
MS.gene022557.t1 MTR_5g088150 47.706 109 55 2 10 117 12 119 1.88e-29 112
MS.gene022557.t1 MTR_5g488210 47.706 109 55 2 10 117 12 119 1.88e-29 112
MS.gene022557.t1 MTR_4g123040 44.538 119 65 1 1 119 15 132 2.01e-29 114
MS.gene022557.t1 MTR_5g088640 47.706 109 55 2 10 117 12 119 2.09e-29 113
MS.gene022557.t1 MTR_5g488170 47.706 109 55 2 10 117 12 119 3.04e-29 111
MS.gene022557.t1 MTR_4g019370 51.961 102 47 2 12 113 38 137 4.17e-29 114
MS.gene022557.t1 MTR_2g033170 44.538 119 65 1 1 119 15 132 4.29e-29 113
MS.gene022557.t1 MTR_3g103570 47.706 109 55 2 6 113 8 115 5.09e-29 113
MS.gene022557.t1 MTR_3g065440 48.148 108 55 1 6 113 8 114 6.80e-29 112
MS.gene022557.t1 MTR_5g078140 48.148 108 55 1 6 113 8 114 7.30e-29 112
MS.gene022557.t1 MTR_5g088610 49.524 105 51 2 10 113 9 112 8.03e-29 113
MS.gene022557.t1 MTR_4g102380 49.074 108 54 1 6 113 8 114 8.36e-29 111
MS.gene022557.t1 MTR_5g014990 47.706 109 55 2 6 113 8 115 8.84e-29 112
MS.gene022557.t1 MTR_4g100720 45.631 103 55 1 7 109 10 111 1.04e-28 108
MS.gene022557.t1 MTR_6g009430 46.018 113 59 2 6 117 8 119 1.08e-28 112
MS.gene022557.t1 MTR_7g102110 47.706 109 55 2 6 113 8 115 1.36e-28 110
MS.gene022557.t1 MTR_5g062790 47.222 108 55 2 10 116 9 115 1.39e-28 111
MS.gene022557.t1 MTR_4g485530 51.020 98 47 1 12 109 14 110 2.25e-28 108
MS.gene022557.t1 MTR_4g125520 31.579 190 125 3 7 195 9 194 5.20e-28 110
MS.gene022557.t1 MTR_4g097570 48.077 104 52 2 6 108 8 110 6.44e-28 109
MS.gene022557.t1 MTR_4g121460 45.192 104 56 1 10 113 12 114 6.77e-28 110
MS.gene022557.t1 MTR_3g083540 46.000 100 53 1 10 109 41 139 7.94e-28 109
MS.gene022557.t1 MTR_4g128670 48.571 105 52 2 6 109 8 111 1.33e-27 109
MS.gene022557.t1 MTR_1g083630 45.536 112 60 1 6 117 8 118 1.37e-27 112
MS.gene022557.t1 MTR_3g101290 45.082 122 62 3 12 133 37 153 1.43e-27 107
MS.gene022557.t1 MTR_2g034790 46.154 104 55 1 10 113 12 114 2.15e-27 108
MS.gene022557.t1 MTR_7g117730 44.000 100 55 1 10 109 12 110 4.09e-27 106
MS.gene022557.t1 MTR_5g049190 44.545 110 59 2 4 113 11 118 6.27e-27 105
MS.gene022557.t1 MTR_4g097570 47.619 105 52 3 6 108 8 111 9.44e-27 106
MS.gene022557.t1 MTR_6g015455 43.511 131 71 3 12 141 5 133 1.11e-25 107
MS.gene022557.t1 MTR_5g079120 29.856 278 163 10 5 280 56 303 2.25e-25 102
MS.gene022557.t1 MTR_7g109320 47.414 116 60 1 10 125 12 126 2.28e-25 103
MS.gene022557.t1 MTR_8g020490 44.000 100 55 1 10 109 8 106 2.52e-25 101
MS.gene022557.t1 MTR_8g060940 46.939 98 51 1 10 107 7 103 5.21e-25 100
MS.gene022557.t1 MTR_5g079290 33.838 198 106 6 10 191 17 205 5.72e-25 100
MS.gene022557.t1 MTR_1g026870 49.020 102 50 2 12 113 85 184 5.97e-25 105
MS.gene022557.t1 MTR_1g026870 34.545 110 67 4 1 107 20 127 2.98e-11 64.3
MS.gene022557.t1 MTR_4g105660 48.077 104 52 2 10 113 178 279 1.21e-24 102
MS.gene022557.t1 MTR_5g078910 45.192 104 56 1 10 113 7 109 1.25e-24 100
MS.gene022557.t1 MTR_3g110028 48.039 102 51 2 12 113 85 184 1.59e-24 103
MS.gene022557.t1 MTR_3g463400 50.000 102 49 2 12 113 133 232 1.85e-24 102
MS.gene022557.t1 MTR_2g096380 58.904 73 29 1 44 116 21 92 2.15e-24 98.2
MS.gene022557.t1 MTR_5g082910 51.020 98 46 2 12 109 19 114 2.91e-24 99.8
MS.gene022557.t1 MTR_6g074860 47.619 105 53 2 12 116 4 106 3.25e-24 98.6
MS.gene022557.t1 MTR_7g061330 50.000 102 49 2 12 113 113 212 3.38e-24 102
MS.gene022557.t1 MTR_7g461410 50.000 102 49 2 12 113 113 212 3.38e-24 102
MS.gene022557.t1 MTR_7g061330 50.000 102 49 2 12 113 77 176 5.01e-24 101
MS.gene022557.t1 MTR_0197s0010 41.176 119 66 2 14 132 5 119 6.29e-24 97.4
MS.gene022557.t1 MTR_5g070020 44.545 110 59 2 4 113 114 221 6.63e-24 99.8
MS.gene022557.t1 MTR_5g078950 45.918 98 52 1 10 107 7 103 8.58e-24 97.8
MS.gene022557.t1 MTR_7g037260 46.667 105 54 2 9 113 142 244 1.03e-23 99.4
MS.gene022557.t1 MTR_7g451170 35.583 163 90 4 12 174 191 338 1.09e-23 99.8
MS.gene022557.t1 MTR_0001s0360 46.000 100 53 1 10 109 7 105 2.32e-23 96.3
MS.gene022557.t1 MTR_5g079220 44.037 109 58 2 10 116 21 128 3.20e-23 96.7
MS.gene022557.t1 MTR_7g017260 38.926 149 75 5 10 152 25 163 4.06e-23 96.3
MS.gene022557.t1 MTR_4g088015 45.714 105 55 2 9 113 218 320 4.96e-23 98.2
MS.gene022557.t1 MTR_0247s0040 46.000 100 53 1 10 109 7 105 5.14e-23 93.6
MS.gene022557.t1 MTR_3g077650 46.078 102 53 2 12 113 181 280 6.11e-23 98.2
MS.gene022557.t1 MTR_4g063100 59.722 72 26 2 44 113 12 82 1.11e-22 94.0
MS.gene022557.t1 MTR_5g078800 43.269 104 58 1 10 113 7 109 2.35e-22 94.0
MS.gene022557.t1 MTR_5g078930 36.986 146 80 3 11 152 10 147 3.63e-22 92.4
MS.gene022557.t1 MTR_5g041570 50.000 96 46 2 12 107 134 227 8.72e-22 94.7
MS.gene022557.t1 MTR_4g128190 44.545 110 46 4 10 118 11 106 9.80e-22 91.7
MS.gene022557.t1 MTR_5g078860 44.037 109 58 2 10 116 7 114 1.13e-21 92.8
MS.gene022557.t1 MTR_4g082040 42.623 122 65 3 12 133 105 221 1.35e-21 94.4
MS.gene022557.t1 MTR_7g061550 43.363 113 61 2 15 125 10 121 1.77e-21 93.2
MS.gene022557.t1 MTR_7g450950 38.655 119 71 2 12 130 157 273 2.52e-21 92.4
MS.gene022557.t1 MTR_6g055910 40.690 145 67 4 36 164 6 147 2.58e-21 90.9
MS.gene022557.t1 MTR_0193s0090 42.308 104 59 1 10 113 7 109 3.82e-21 89.4
MS.gene022557.t1 MTR_7g037130 40.833 120 68 3 9 128 142 258 5.88e-21 91.7
MS.gene022557.t1 MTR_7g111290 60.000 65 25 1 44 108 4 67 6.89e-21 91.3
MS.gene022557.t1 MTR_1g085880 44.643 112 59 3 7 116 8 118 1.66e-20 87.4
MS.gene022557.t1 MTR_7g035350 44.000 100 54 2 15 114 228 325 1.88e-20 90.9
MS.gene022557.t1 MTR_6g027340 34.615 156 88 3 12 167 16 157 2.02e-20 87.4
MS.gene022557.t1 MTR_3g089045 47.619 105 53 2 3 107 7 109 2.02e-20 89.4
MS.gene022557.t1 MTR_6g027360 31.658 199 121 4 10 208 76 259 2.16e-20 89.4
MS.gene022557.t1 MTR_5g010650 47.423 97 49 2 12 108 110 204 4.05e-20 90.1
MS.gene022557.t1 MTR_1g085770 45.872 109 56 3 10 116 11 118 5.28e-20 88.2
MS.gene022557.t1 MTR_3g045430 39.450 109 64 2 10 117 13 120 7.05e-20 87.8
MS.gene022557.t1 MTR_5g007300 48.718 78 39 1 10 87 64 140 1.06e-19 83.6
MS.gene022557.t1 MTR_1g057980 42.453 106 59 2 9 114 77 180 1.07e-19 87.4
MS.gene022557.t1 MTR_7g086960 47.917 96 48 2 12 107 89 182 8.20e-19 85.5
MS.gene022557.t1 MTR_6g027370 39.655 116 68 2 12 127 99 212 2.02e-18 84.3
MS.gene022557.t1 MTR_8g468380 38.235 102 61 2 15 116 25 124 2.11e-16 79.3
MS.gene022557.t1 MTR_5g038910 37.168 113 67 3 4 116 20 128 6.66e-16 77.8
MS.gene022557.t1 MTR_5g038910 37.168 113 67 3 4 116 20 128 1.13e-15 77.0
MS.gene022557.t1 MTR_2g096380 48.148 54 28 0 69 122 1 54 8.11e-12 62.8
MS.gene022557.t1 MTR_0023s0210 38.462 78 47 1 10 87 7 83 1.14e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene022557.t1 AT3G60460 50.165 303 120 10 1 282 4 296 1.58e-80 246
MS.gene022557.t1 AT4G26930 56.075 107 46 1 10 116 19 124 1.47e-39 142
MS.gene022557.t1 AT5G55020 54.206 107 48 1 10 116 26 131 2.96e-37 139
MS.gene022557.t1 AT2G32460 54.206 107 48 1 10 116 18 123 6.31e-37 137
MS.gene022557.t1 AT2G32460 54.206 107 48 1 10 116 6 111 7.12e-37 137
MS.gene022557.t1 AT5G06100 49.550 111 55 1 6 116 28 137 4.14e-36 134
MS.gene022557.t1 AT3G11440 51.402 107 51 1 10 116 41 146 4.48e-36 134
MS.gene022557.t1 AT3G27810 48.739 119 57 2 10 128 20 134 4.65e-36 129
MS.gene022557.t1 AT5G40350 46.269 134 65 3 10 139 17 147 7.92e-36 128
MS.gene022557.t1 AT2G26960 56.604 106 45 1 12 117 22 126 1.21e-35 132
MS.gene022557.t1 AT3G47600 41.401 157 82 3 6 161 8 155 1.26e-35 130
MS.gene022557.t1 AT5G06100 49.550 111 55 1 6 116 28 137 1.38e-35 134
MS.gene022557.t1 AT5G06100 49.550 111 55 1 6 116 28 137 1.38e-35 134
MS.gene022557.t1 AT5G06100 49.550 111 55 1 6 116 28 137 1.38e-35 134
MS.gene022557.t1 AT5G06100 49.550 111 55 1 6 116 28 137 1.38e-35 134
MS.gene022557.t1 AT3G11440 51.402 107 51 1 10 116 41 146 1.85e-35 134
MS.gene022557.t1 AT3G11440 51.402 107 51 1 10 116 41 146 1.85e-35 134
MS.gene022557.t1 AT3G11440 51.402 107 51 1 10 116 41 146 1.85e-35 134
MS.gene022557.t1 AT1G08810 43.919 148 80 2 6 153 8 152 5.59e-35 127
MS.gene022557.t1 AT4G01680 53.153 111 51 1 7 117 9 118 7.45e-35 126
MS.gene022557.t1 AT3G01140 42.177 147 75 3 6 143 8 153 1.31e-34 128
MS.gene022557.t1 AT1G74650 45.968 124 66 1 10 133 12 134 1.81e-34 127
MS.gene022557.t1 AT3G01140 42.177 147 75 3 6 143 51 196 2.31e-34 128
MS.gene022557.t1 AT3G13890 50.893 112 54 1 2 113 4 114 2.41e-34 128
MS.gene022557.t1 AT4G01680 53.153 111 51 1 7 117 9 118 2.53e-34 127
MS.gene022557.t1 AT4G28110 49.107 112 55 2 6 116 8 118 3.12e-34 125
MS.gene022557.t1 AT3G61250 52.212 113 51 2 6 118 8 117 4.70e-34 125
MS.gene022557.t1 AT1G79180 47.552 143 62 4 6 139 10 148 5.20e-34 125
MS.gene022557.t1 AT3G02940 47.788 113 57 2 6 117 8 119 6.81e-34 125
MS.gene022557.t1 AT5G62470 46.154 130 61 2 10 131 12 140 6.91e-34 126
MS.gene022557.t1 AT3G01530 47.059 119 59 2 4 122 19 133 7.59e-34 122
MS.gene022557.t1 AT2G47190 49.091 110 55 1 10 119 20 128 9.29e-34 124
MS.gene022557.t1 AT3G02940 47.788 113 57 2 6 117 8 119 1.04e-33 125
MS.gene022557.t1 AT3G02940 47.788 113 57 2 6 117 8 119 1.04e-33 125
MS.gene022557.t1 AT3G12720 50.407 123 58 2 10 130 22 143 1.36e-33 125
MS.gene022557.t1 AT1G48000 46.847 111 58 1 10 120 32 141 1.47e-33 123
MS.gene022557.t1 AT5G65230 50.000 108 53 1 6 113 8 114 1.56e-33 124
MS.gene022557.t1 AT3G48920 53.982 113 51 1 5 117 13 124 1.63e-33 123
MS.gene022557.t1 AT4G21440 49.541 109 53 2 10 117 12 119 1.94e-33 125
MS.gene022557.t1 AT5G15310 43.939 132 71 2 6 137 8 136 2.41e-33 122
MS.gene022557.t1 AT2G16720 47.727 132 64 4 6 136 8 135 2.43e-33 123
MS.gene022557.t1 AT5G26660 51.818 110 52 1 7 116 9 117 2.56e-33 125
MS.gene022557.t1 AT5G59780 50.420 119 58 1 7 125 5 122 2.78e-33 122
MS.gene022557.t1 AT1G68320 38.994 159 86 3 8 166 17 164 2.89e-33 123
MS.gene022557.t1 AT5G15310 43.939 132 71 2 6 137 8 136 3.30e-33 124
MS.gene022557.t1 AT3G30210 52.885 104 48 1 10 113 27 129 3.71e-33 123
MS.gene022557.t1 AT5G15310 43.939 132 71 2 6 137 8 136 3.75e-33 124
MS.gene022557.t1 AT5G16770 40.411 146 83 3 6 150 8 150 4.52e-33 124
MS.gene022557.t1 AT5G16770 40.411 146 83 3 6 150 8 150 4.52e-33 124
MS.gene022557.t1 AT1G09540 53.271 107 49 1 7 113 9 114 4.67e-33 124
MS.gene022557.t1 AT4G34990 45.038 131 69 2 6 136 8 135 5.18e-33 122
MS.gene022557.t1 AT1G63910 48.696 115 58 1 2 116 4 117 6.03e-33 124
MS.gene022557.t1 AT5G16770 40.411 146 83 3 6 150 8 150 6.34e-33 124
MS.gene022557.t1 AT5G16770 40.411 146 83 3 6 150 8 150 6.34e-33 124
MS.gene022557.t1 AT5G54230 48.624 109 54 2 10 117 12 119 8.69e-33 123
MS.gene022557.t1 AT1G25340 43.089 123 69 1 2 124 10 131 9.04e-33 122
MS.gene022557.t1 AT3G28910 49.074 108 54 1 6 113 8 114 9.71e-33 123
MS.gene022557.t1 AT2G31180 46.552 116 60 2 10 124 12 126 9.91e-33 121
MS.gene022557.t1 AT1G22640 45.802 131 68 2 6 136 8 135 1.06e-32 121
MS.gene022557.t1 AT1G57560 49.558 113 54 2 7 119 9 118 1.85e-32 121
MS.gene022557.t1 AT4G38620 42.038 157 84 3 6 156 8 163 1.96e-32 121
MS.gene022557.t1 AT1G35515 39.698 199 103 8 6 190 8 203 2.26e-32 119
MS.gene022557.t1 AT3G46130 50.420 119 58 1 7 125 6 123 2.59e-32 120
MS.gene022557.t1 AT1G57560 49.558 113 54 2 7 119 9 118 2.61e-32 121
MS.gene022557.t1 AT3G24310 45.736 129 63 2 7 135 15 136 2.76e-32 120
MS.gene022557.t1 AT4G37780 52.294 109 50 2 6 113 8 115 2.79e-32 121
MS.gene022557.t1 AT4G13480 45.736 129 63 2 7 135 3 124 3.12e-32 120
MS.gene022557.t1 AT4G09460 45.033 151 73 6 6 150 8 154 3.52e-32 119
MS.gene022557.t1 AT5G62470 46.154 130 60 3 10 131 12 139 3.80e-32 122
MS.gene022557.t1 AT3G13890 47.107 121 54 2 2 113 4 123 6.42e-32 121
MS.gene022557.t1 AT4G05100 48.182 110 54 2 10 119 13 119 1.07e-31 120
MS.gene022557.t1 AT1G16490 50.450 111 53 2 6 115 10 119 1.25e-31 119
MS.gene022557.t1 AT1G56160 39.264 163 95 3 6 165 10 171 1.60e-31 119
MS.gene022557.t1 AT5G10280 47.222 108 56 1 6 113 8 114 2.82e-31 119
MS.gene022557.t1 AT3G12820 50.877 114 53 2 6 119 10 120 3.12e-31 117
MS.gene022557.t1 AT4G01680 48.780 123 50 3 7 117 9 130 4.28e-31 119
MS.gene022557.t1 AT1G34670 47.222 108 56 1 6 113 8 114 6.38e-31 119
MS.gene022557.t1 AT5G23000 48.624 109 54 2 6 113 8 115 1.41e-30 117
MS.gene022557.t1 AT5G56110 48.148 108 55 1 6 113 8 114 1.54e-30 117
MS.gene022557.t1 AT3G50060 55.882 102 43 2 12 113 6 105 2.28e-30 116
MS.gene022557.t1 AT3G23250 40.127 157 89 3 10 165 12 164 3.15e-30 115
MS.gene022557.t1 AT5G57620 49.541 109 53 2 6 113 8 115 3.16e-30 116
MS.gene022557.t1 AT1G74430 49.107 112 55 2 6 116 8 118 3.23e-30 115
MS.gene022557.t1 AT1G25340 42.276 123 65 2 2 124 10 126 3.71e-30 115
MS.gene022557.t1 AT5G07690 47.664 107 55 1 8 114 10 115 7.30e-30 115
MS.gene022557.t1 AT3G53200 49.541 109 54 1 5 113 4 111 8.04e-30 113
MS.gene022557.t1 AT1G25340 42.276 123 65 2 2 124 10 126 8.38e-30 114
MS.gene022557.t1 AT5G14750 47.664 107 55 1 3 109 9 114 8.80e-30 112
MS.gene022557.t1 AT1G18570 47.826 115 57 2 5 119 8 119 9.97e-30 115
MS.gene022557.t1 AT5G07700 49.057 106 53 1 8 113 10 114 1.19e-29 115
MS.gene022557.t1 AT5G07700 49.057 106 53 1 8 113 10 114 1.19e-29 115
MS.gene022557.t1 AT4G22680 48.276 116 57 2 6 121 8 120 1.96e-29 112
MS.gene022557.t1 AT5G12870 47.321 112 57 2 10 120 18 128 2.99e-29 112
MS.gene022557.t1 AT5G61420 47.321 112 56 2 8 119 10 118 3.33e-29 114
MS.gene022557.t1 AT4G17785 47.115 104 54 1 10 113 13 115 3.84e-29 114
MS.gene022557.t1 AT1G06180 46.154 104 55 1 10 113 12 114 3.86e-29 111
MS.gene022557.t1 AT3G55730 50.000 126 56 4 12 132 56 179 3.93e-29 114
MS.gene022557.t1 AT4G25560 46.721 122 62 2 1 122 1 119 4.35e-29 112
MS.gene022557.t1 AT1G66230 47.748 111 57 1 6 116 8 117 4.54e-29 112
MS.gene022557.t1 AT4G17785 47.115 104 54 1 10 113 13 115 4.58e-29 114
MS.gene022557.t1 AT3G13540 46.296 108 56 2 10 116 23 129 4.79e-29 111
MS.gene022557.t1 AT3G49690 48.624 109 54 2 6 113 8 115 4.82e-29 112
MS.gene022557.t1 AT5G49620 48.649 111 56 1 10 120 26 135 5.49e-29 112
MS.gene022557.t1 AT3G28470 50.000 104 51 1 6 109 8 110 5.89e-29 112
MS.gene022557.t1 AT1G79180 39.080 174 64 5 6 139 10 181 6.97e-29 112
MS.gene022557.t1 AT3G27920 44.000 125 67 3 4 127 9 131 8.15e-29 110
MS.gene022557.t1 AT5G40330 38.750 160 89 4 4 162 5 156 8.45e-29 110
MS.gene022557.t1 AT3G06490 46.957 115 60 1 5 119 14 127 8.85e-29 112
MS.gene022557.t1 AT5G67300 54.902 102 44 2 12 113 6 105 1.23e-28 111
MS.gene022557.t1 AT3G08500 46.847 111 58 1 3 113 23 132 1.32e-28 112
MS.gene022557.t1 AT4G12350 37.791 172 87 4 6 177 8 159 1.51e-28 110
MS.gene022557.t1 AT5G65790 47.706 109 55 2 6 113 8 115 1.68e-28 112
MS.gene022557.t1 AT5G62320 41.781 146 72 4 1 136 1 143 1.69e-28 110
MS.gene022557.t1 AT2G23290 51.754 114 52 3 1 113 1 112 1.81e-28 111
MS.gene022557.t1 AT2G47460 31.443 194 129 3 10 202 12 202 2.15e-28 112
MS.gene022557.t1 AT5G49330 47.115 104 54 1 10 113 12 114 2.87e-28 111
MS.gene022557.t1 AT5G60890 45.794 107 57 1 7 113 9 114 2.94e-28 110
MS.gene022557.t1 AT2G36890 44.068 118 62 3 6 122 8 122 4.24e-28 110
MS.gene022557.t1 AT5G16600 42.553 141 74 2 6 140 8 147 4.36e-28 110
MS.gene022557.t1 AT5G52600 44.340 106 58 1 4 109 6 110 5.21e-28 107
MS.gene022557.t1 AT1G18710 46.429 112 58 2 6 116 8 118 5.47e-28 108
MS.gene022557.t1 AT5G14340 43.697 119 66 1 6 124 20 137 7.16e-28 108
MS.gene022557.t1 AT5G52260 47.458 118 59 2 3 120 5 119 7.32e-28 108
MS.gene022557.t1 AT2G39880 52.941 102 46 2 12 113 50 149 8.52e-28 110
MS.gene022557.t1 AT2G36890 45.872 109 57 2 6 113 49 156 8.62e-28 110
MS.gene022557.t1 AT4G37260 50.000 110 52 3 4 113 6 112 1.20e-27 109
MS.gene022557.t1 AT2G26950 47.573 103 53 1 12 114 18 119 8.88e-27 108
MS.gene022557.t1 AT3G09230 49.550 111 51 3 3 113 49 154 1.35e-26 107
MS.gene022557.t1 AT1G74080 44.860 107 58 1 8 114 10 115 1.52e-26 106
MS.gene022557.t1 AT3G62610 45.192 104 56 1 10 113 12 114 1.87e-26 106
MS.gene022557.t1 AT5G35550 42.241 116 64 2 7 122 11 123 2.31e-26 104
MS.gene022557.t1 AT4G18770 50.000 102 49 2 12 113 217 316 5.91e-26 106
MS.gene022557.t1 AT5G02320 49.107 112 54 3 12 122 127 236 1.19e-25 106
MS.gene022557.t1 AT5G02320 49.107 112 54 3 12 122 127 236 1.19e-25 106
MS.gene022557.t1 AT5G02320 49.107 112 54 3 12 122 67 176 1.31e-25 105
MS.gene022557.t1 AT5G49620 43.200 125 56 2 10 120 26 149 1.85e-25 103
MS.gene022557.t1 AT1G66370 35.632 174 95 4 10 183 8 164 2.53e-25 101
MS.gene022557.t1 AT3G27810 52.941 85 36 2 44 128 5 85 3.17e-25 99.4
MS.gene022557.t1 AT5G40350 49.000 100 44 3 44 139 6 102 7.31e-25 98.2
MS.gene022557.t1 AT5G40360 46.903 113 56 3 2 114 150 258 9.76e-25 102
MS.gene022557.t1 AT4G32730 42.424 132 68 3 12 137 87 216 2.29e-24 103
MS.gene022557.t1 AT4G32730 36.082 97 59 3 12 107 35 129 2.19e-11 64.7
MS.gene022557.t1 AT4G32730 42.424 132 68 3 12 137 87 216 2.29e-24 103
MS.gene022557.t1 AT4G32730 36.082 97 59 3 12 107 35 129 2.19e-11 64.7
MS.gene022557.t1 AT4G32730 42.424 132 68 3 12 137 87 216 2.29e-24 103
MS.gene022557.t1 AT4G32730 36.082 97 59 3 12 107 35 129 2.19e-11 64.7
MS.gene022557.t1 AT4G32730 42.424 132 68 3 12 137 87 216 2.29e-24 103
MS.gene022557.t1 AT4G32730 36.082 97 59 3 12 107 35 129 2.19e-11 64.7
MS.gene022557.t1 AT5G58850 43.636 110 60 2 4 113 97 204 2.86e-24 101
MS.gene022557.t1 AT4G32730 42.424 132 68 3 12 137 87 216 2.90e-24 102
MS.gene022557.t1 AT4G32730 36.082 97 59 3 12 107 35 129 2.70e-11 64.3
MS.gene022557.t1 AT5G11510 46.078 102 53 2 12 113 81 180 2.99e-24 102
MS.gene022557.t1 AT5G11510 33.945 109 67 4 2 107 17 123 2.23e-11 64.7
MS.gene022557.t1 AT5G11510 46.078 102 53 2 12 113 81 180 2.99e-24 102
MS.gene022557.t1 AT5G11510 33.945 109 67 4 2 107 17 123 2.23e-11 64.7
MS.gene022557.t1 AT5G11510 46.078 102 53 2 12 113 81 180 2.99e-24 102
MS.gene022557.t1 AT5G11510 33.945 109 67 4 2 107 17 123 2.23e-11 64.7
MS.gene022557.t1 AT5G11510 46.078 102 53 2 12 113 81 180 3.67e-24 102
MS.gene022557.t1 AT5G11510 33.945 109 67 4 2 107 17 123 2.29e-11 64.7
MS.gene022557.t1 AT1G69560 33.493 209 127 5 3 206 98 299 3.88e-24 100
MS.gene022557.t1 AT5G11510 46.078 102 53 2 12 113 81 180 3.95e-24 102
MS.gene022557.t1 AT5G11510 33.945 109 67 4 2 107 17 123 2.69e-11 64.3
MS.gene022557.t1 AT1G69560 33.493 209 127 5 3 206 114 315 4.09e-24 100
MS.gene022557.t1 AT3G09370 50.000 102 49 2 12 113 135 234 6.12e-24 101
MS.gene022557.t1 AT3G09370 50.000 102 49 2 12 113 130 229 6.41e-24 101
MS.gene022557.t1 AT3G09370 50.000 102 49 2 12 113 143 242 8.69e-24 100
MS.gene022557.t1 AT3G46130 58.904 73 29 1 44 116 11 82 8.96e-24 97.1
MS.gene022557.t1 AT3G47600 42.857 119 58 3 44 161 40 149 1.16e-23 98.6
MS.gene022557.t1 AT5G59780 56.098 82 35 1 44 125 21 101 1.32e-23 96.3
MS.gene022557.t1 AT5G26660 58.904 73 29 1 44 116 15 86 1.41e-23 98.6
MS.gene022557.t1 AT3G46130 56.098 82 35 1 44 125 21 101 1.75e-23 96.3
MS.gene022557.t1 AT1G66380 46.000 100 53 1 10 109 8 106 3.39e-23 92.8
MS.gene022557.t1 AT1G56650 46.000 100 53 1 10 109 8 106 7.73e-23 94.7
MS.gene022557.t1 AT3G29020 43.363 113 59 3 12 124 65 172 1.85e-22 93.6
MS.gene022557.t1 AT3G29020 43.363 113 59 3 12 124 67 174 1.87e-22 95.1
MS.gene022557.t1 AT3G12820 59.459 74 27 2 46 119 2 72 1.88e-22 92.4
MS.gene022557.t1 AT3G27785 45.192 104 55 2 10 113 187 288 2.13e-22 96.7
MS.gene022557.t1 AT5G11050 42.857 105 58 2 9 113 102 204 4.74e-22 95.5
MS.gene022557.t1 AT1G26780 47.619 105 53 2 12 116 98 200 5.36e-22 93.2
MS.gene022557.t1 AT1G17950 45.714 105 55 2 12 116 5 107 5.71e-22 92.4
MS.gene022557.t1 AT1G26780 47.619 105 53 2 12 116 98 200 7.30e-22 94.4
MS.gene022557.t1 AT5G17800 46.667 105 54 2 12 116 93 195 1.06e-21 93.2
MS.gene022557.t1 AT4G33450 41.667 120 68 2 10 129 17 134 1.65e-21 91.3
MS.gene022557.t1 AT1G66390 44.000 100 55 1 10 109 8 106 3.82e-21 90.5
MS.gene022557.t1 AT4G00540 50.459 109 48 4 10 114 101 207 7.20e-21 92.0
MS.gene022557.t1 AT4G00540 50.459 109 48 4 10 114 99 205 1.51e-20 91.3
MS.gene022557.t1 AT3G53200 55.714 70 30 1 44 113 10 78 1.72e-20 87.4
MS.gene022557.t1 AT1G73410 46.667 105 54 2 12 116 6 108 3.68e-20 87.4
MS.gene022557.t1 AT1G73410 46.667 105 54 2 12 116 6 108 4.90e-20 86.3
MS.gene022557.t1 AT2G37630 46.316 95 48 2 15 107 7 100 7.28e-20 88.6
MS.gene022557.t1 AT5G14750 40.708 113 57 2 46 158 18 120 3.77e-19 83.2
MS.gene022557.t1 AT2G25230 40.404 99 56 3 17 114 30 126 5.33e-19 84.3
MS.gene022557.t1 AT5G35550 50.633 79 36 2 44 122 51 126 1.31e-18 83.6
MS.gene022557.t1 AT5G39700 40.517 116 67 2 1 116 45 158 1.62e-17 79.3
MS.gene022557.t1 AT5G40430 37.143 105 63 3 10 114 52 153 2.92e-15 74.3
MS.gene022557.t1 AT1G14350 34.646 127 76 4 4 127 19 141 3.50e-15 75.5
MS.gene022557.t1 AT1G14350 34.646 127 76 4 4 127 19 141 3.50e-15 75.5
MS.gene022557.t1 AT1G66380 51.515 66 31 1 44 109 9 73 9.25e-15 69.3
MS.gene022557.t1 AT2G02820 35.398 113 69 3 4 116 24 132 1.49e-14 73.9
MS.gene022557.t1 AT2G02820 35.398 113 69 3 4 116 24 132 1.89e-14 73.6
MS.gene022557.t1 AT2G02820 35.398 113 69 3 4 116 24 132 2.72e-14 72.4
MS.gene022557.t1 AT1G22640 45.679 81 41 2 56 136 1 78 6.49e-14 69.3
MS.gene022557.t1 AT3G23250 39.640 111 62 3 56 165 1 107 4.26e-13 67.8
MS.gene022557.t1 AT1G66380 35.714 98 61 2 10 106 8 104 4.70e-12 62.0
MS.gene022557.t1 AT5G59780 47.368 57 30 0 69 125 1 57 1.48e-11 62.4
MS.gene022557.t1 AT1G18960 34.286 105 59 3 12 113 10 107 1.74e-11 63.9
MS.gene022557.t1 AT5G14750 36.893 103 55 3 56 158 1 93 2.17e-11 61.2
MS.gene022557.t1 AT5G14750 36.893 103 55 3 56 158 1 93 2.17e-11 61.2
MS.gene022557.t1 AT3G46130 47.368 57 30 0 69 125 1 57 2.58e-11 62.0
MS.gene022557.t1 AT3G18100 37.500 104 63 2 4 107 538 639 2.79e-11 64.3
MS.gene022557.t1 AT3G18100 37.500 104 63 2 4 107 377 478 3.95e-11 63.9
MS.gene022557.t1 AT3G18100 37.500 104 63 2 4 107 490 591 3.96e-11 63.9
MS.gene022557.t1 AT3G18100 37.500 104 63 2 4 107 325 426 4.51e-11 63.5
MS.gene022557.t1 AT1G71030 43.077 65 36 1 49 113 5 68 4.68e-11 61.2
MS.gene022557.t1 AT1G71030 43.077 65 36 1 49 113 19 82 5.98e-11 60.8

Find 53 sgRNAs with CRISPR-Local

Find 106 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATCAAAATAGTTCCATTAT+TGG 0.170040 8.4:+80491245 MS.gene022557:CDS
GTAAAATCAGTTTGGAGTTC+TGG 0.236486 8.4:-80491384 None:intergenic
ATAGAATTGCAGGAACAATT+TGG 0.256500 8.4:+80490685 MS.gene022557:CDS
GTCTGTTCTTCCTGGTAAAT+AGG 0.261776 8.4:-80490731 None:intergenic
GATGAAGAACTGAACTTATA+AGG 0.286902 8.4:-80491156 None:intergenic
GACCAAACACGTCAAATAAA+TGG 0.297779 8.4:-80491434 None:intergenic
ACATCATTGTCTGTTCTTCC+TGG 0.301376 8.4:-80490739 None:intergenic
GAGGATTGTGATAGAATTGC+AGG 0.342837 8.4:+80490675 MS.gene022557:CDS
GCAAGTCTTGTCGTCTTCGT+TGG 0.346401 8.4:+80490041 MS.gene022557:CDS
CACCATTTATTTGACGTGTT+TGG 0.348232 8.4:+80491432 MS.gene022557:CDS
TTGGAAAAGTAAAATCAGTT+TGG 0.378279 8.4:-80491392 None:intergenic
TAAAATCAGTTTGGAGTTCT+GGG 0.382682 8.4:-80491383 None:intergenic
CCCTTGGAAACATCAGAGTT+TGG 0.383346 8.4:+80491456 MS.gene022557:CDS
ATTTGACGTGTTTGGTCCCT+TGG 0.383686 8.4:+80491440 MS.gene022557:CDS
TAGAATTGCAGGAACAATTT+GGG 0.390771 8.4:+80490686 MS.gene022557:CDS
AGGAACAATTTGGGAACAAA+TGG 0.391982 8.4:+80490695 MS.gene022557:CDS
TTCCCATGTTCCATCTTATG+AGG 0.398321 8.4:+80490861 MS.gene022557:CDS
AGTTCTTTGAAGAAGACCTT+TGG 0.401175 8.4:-80490017 None:intergenic
CAAGTCTTGTCGTCTTCGTT+GGG 0.415472 8.4:+80490042 MS.gene022557:CDS
CGAATGGAGCTCCAATCTCT+TGG 0.416244 8.4:-80489992 None:intergenic
AAAGGTCTTCTTCAAAGAAC+TGG 0.425042 8.4:+80490019 MS.gene022557:CDS
CAGAGCTTAGAGTGATTTGA+AGG 0.433967 8.4:-80491570 None:intergenic
TTTGCGTCCGCCTCGAAACT+AGG 0.437002 8.4:-80491288 None:intergenic
TTTGTAATTACCTCATAAGA+TGG 0.437742 8.4:-80490871 None:intergenic
CTTCATCATGTGAAGAAGTA+TGG 0.445060 8.4:+80489968 MS.gene022557:CDS
AGAAGTATGGTCCAAGAGAT+TGG 0.451426 8.4:+80489981 MS.gene022557:CDS
TGGAACATGGGAAGAAACTT+TGG 0.458478 8.4:-80490851 None:intergenic
TGTTCATCAACTCTTTCCAT+TGG 0.459549 8.4:-80491411 None:intergenic
ATGTGATCAAACATGTCCTC+TGG 0.462287 8.4:-80491540 None:intergenic
AAGAAGACCTTTGGATCGAA+TGG 0.469841 8.4:-80490008 None:intergenic
TGGATGCAAGTTTACAATAG+AGG 0.506086 8.4:+80490648 MS.gene022557:CDS
CGCCTCGAAACTAGGTTGCT+CGG 0.516820 8.4:-80491280 None:intergenic
GGAACAATTTGGGAACAAAT+GGG 0.535109 8.4:+80490696 MS.gene022557:CDS
ATCCGAGCAACCTAGTTTCG+AGG 0.535115 8.4:+80491278 MS.gene022557:CDS
GAGCAGTAGACAGAAGAGAT+TGG 0.536780 8.4:+80490774 MS.gene022557:CDS
AAGTTCAGTTCTTCATCAGA+GGG 0.537010 8.4:+80491162 MS.gene022557:CDS
TCCAAACTCTGATGTTTCCA+AGG 0.537292 8.4:-80491457 None:intergenic
TAAGTTCAGTTCTTCATCAG+AGG 0.551231 8.4:+80491161 MS.gene022557:CDS
AAGATTGCATCCTATTTACC+AGG 0.554048 8.4:+80490721 MS.gene022557:CDS
AACATGTAAGGAAAGGTCCA+TGG 0.558748 8.4:+80489921 MS.gene022557:CDS
AGTTTACAATAGAGGAAGAG+AGG 0.563998 8.4:+80490656 MS.gene022557:CDS
GATCAAGAACATGTAAGGAA+AGG 0.569963 8.4:+80489914 MS.gene022557:CDS
GGAAACATCAGAGTTTGGAA+TGG 0.578679 8.4:+80491461 MS.gene022557:CDS
TGGAGCTCCATTCGATCCAA+AGG 0.580870 8.4:+80490001 MS.gene022557:CDS
TGATCGGAATTCTCAATGCA+TGG 0.593071 8.4:-80491219 None:intergenic
GTTTGGAGTTCTGGGATCTG+AGG 0.595422 8.4:-80491375 None:intergenic
CCAAACTCTGATGTTTCCAA+GGG 0.599263 8.4:-80491456 None:intergenic
TTACCTCATAAGATGGAACA+TGG 0.602643 8.4:-80490864 None:intergenic
GTAGACAGAAGAGATTGGCT+AGG 0.612062 8.4:+80490779 MS.gene022557:CDS
AGCTTAGAGTGATTTGAAGG+TGG 0.627642 8.4:-80491567 None:intergenic
TACCTCATAAGATGGAACAT+GGG 0.640765 8.4:-80490863 None:intergenic
CATGGTAATGAATATGACTG+AGG 0.712696 8.4:-80491201 None:intergenic
CGAGCAACCTAGTTTCGAGG+CGG 0.733355 8.4:+80491281 MS.gene022557:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTCTTATATTTTTATTGA+AGG + chr8.4:80491131-80491150 MS.gene022557:intron 10.0%
!! AAATAAGAAATTTCTTTCAT+GGG + chr8.4:80490388-80490407 MS.gene022557:intron 15.0%
!! GTTCAAATTAATTATTTGAT+GGG + chr8.4:80490565-80490584 MS.gene022557:intron 15.0%
!! TAAATAAGAAATTTCTTTCA+TGG + chr8.4:80490387-80490406 MS.gene022557:intron 15.0%
!! TATGAAAATTTACAATCATA+GGG + chr8.4:80490323-80490342 MS.gene022557:intron 15.0%
!! TTATGAAAATTTACAATCAT+AGG + chr8.4:80490322-80490341 MS.gene022557:intron 15.0%
!!! TATAAGAATTTTAGAGAAAA+CGG - chr8.4:80491121-80491140 None:intergenic 15.0%
!! CGTTCAAATTAATTATTTGA+TGG + chr8.4:80490564-80490583 MS.gene022557:intron 20.0%
!! TATCAAAATAGTTCCATTAT+TGG + chr8.4:80491245-80491264 MS.gene022557:CDS 20.0%
!! TCTCTTGATATTTAGTATTA+TGG + chr8.4:80490460-80490479 MS.gene022557:intron 20.0%
!! TGAAAAATATAATTTCGCTT+TGG + chr8.4:80490292-80490311 MS.gene022557:intron 20.0%
!! TTAAAATTATGAACAATCGA+TGG - chr8.4:80490496-80490515 None:intergenic 20.0%
!!! AACTATTTTGATAACTTGAT+CGG - chr8.4:80491238-80491257 None:intergenic 20.0%
!!! GATTTTTTAAGATCCAATAA+TGG - chr8.4:80491261-80491280 None:intergenic 20.0%
!!! TTATTTGATTTTTGTGTTTC+TGG + chr8.4:80490611-80490630 MS.gene022557:intron 20.0%
! AAAAAGATCAAGAACATGTA+AGG + chr8.4:80489909-80489928 MS.gene022557:CDS 25.0%
! ACAATGATGTCAAAAATTTC+TGG + chr8.4:80490752-80490771 MS.gene022557:CDS 25.0%
! TTGGAAAAGTAAAATCAGTT+TGG - chr8.4:80491395-80491414 None:intergenic 25.0%
! TTTGTAATTACCTCATAAGA+TGG - chr8.4:80490874-80490893 None:intergenic 25.0%
!!! AACTGATTTTACTTTTCCAA+TGG + chr8.4:80491395-80491414 MS.gene022557:CDS 25.0%
!!! ATAACATACTTTTTGAGGTT+TGG - chr8.4:80490082-80490101 None:intergenic 25.0%
!!! TAAGGATAACATACTTTTTG+AGG - chr8.4:80490087-80490106 None:intergenic 25.0%
!!! TCAATTTTGAAACTCCTTAA+TGG - chr8.4:80491501-80491520 None:intergenic 25.0%
!!! TTTATAGCTCTGATCAAAAA+GGG - chr8.4:80491334-80491353 None:intergenic 25.0%
!!! TTTGATGGGTTTTTATTGAT+TGG + chr8.4:80490579-80490598 MS.gene022557:intron 25.0%
!!! TTTGTTTTTTTGTGACTTTG+AGG - chr8.4:80490830-80490849 None:intergenic 25.0%
!!! TTTTATAGCTCTGATCAAAA+AGG - chr8.4:80491335-80491354 None:intergenic 25.0%
AATACACTTGCATAGTACAT+TGG + chr8.4:80490514-80490533 MS.gene022557:intron 30.0%
AGAAAACGGAATGAGAATTT+GGG - chr8.4:80491107-80491126 None:intergenic 30.0%
ATAGAATTGCAGGAACAATT+TGG + chr8.4:80490685-80490704 MS.gene022557:CDS 30.0%
GAGGTAATTACAAAACACAA+TGG + chr8.4:80490880-80490899 MS.gene022557:intron 30.0%
GATGAAGAACTGAACTTATA+AGG - chr8.4:80491159-80491178 None:intergenic 30.0%
TAGAATTGCAGGAACAATTT+GGG + chr8.4:80490686-80490705 MS.gene022557:CDS 30.0%
! TAAAATCAGTTTGGAGTTCT+GGG - chr8.4:80491386-80491405 None:intergenic 30.0%
!! ATTGTCCAATTTTGATCCAA+CGG - chr8.4:80490974-80490993 None:intergenic 30.0%
!! TTTCTTTGATGATTTTCCAG+AGG + chr8.4:80491524-80491543 MS.gene022557:CDS 30.0%
!!! TTCCTTTTTTTGAGCCATTA+AGG + chr8.4:80491484-80491503 MS.gene022557:CDS 30.0%
AAAGGTCTTCTTCAAAGAAC+TGG + chr8.4:80490019-80490038 MS.gene022557:CDS 35.0%
AAGATTGCATCCTATTTACC+AGG + chr8.4:80490721-80490740 MS.gene022557:CDS 35.0%
AAGTTCAGTTCTTCATCAGA+GGG + chr8.4:80491162-80491181 MS.gene022557:CDS 35.0%
AGAGAGATGAAAGTGAAGTA+AGG - chr8.4:80490105-80490124 None:intergenic 35.0%
AGGAACAATTTGGGAACAAA+TGG + chr8.4:80490695-80490714 MS.gene022557:CDS 35.0%
AGTTTACAATAGAGGAAGAG+AGG + chr8.4:80490656-80490675 MS.gene022557:CDS 35.0%
ATAGTACATTGGTGCATGTT+TGG + chr8.4:80490525-80490544 MS.gene022557:intron 35.0%
ATGAACAATCGATGGAGAAT+TGG - chr8.4:80490488-80490507 None:intergenic 35.0%
ATTGTCTGATCTTGATCCAA+CGG + chr8.4:80491043-80491062 MS.gene022557:intron 35.0%
CACCATTTATTTGACGTGTT+TGG + chr8.4:80491432-80491451 MS.gene022557:CDS 35.0%
CTCCTTAATGGCTCAAAAAA+AGG - chr8.4:80491489-80491508 None:intergenic 35.0%
CTTCATCATGTGAAGAAGTA+TGG + chr8.4:80489968-80489987 MS.gene022557:CDS 35.0%
GACCAAACACGTCAAATAAA+TGG - chr8.4:80491437-80491456 None:intergenic 35.0%
GAGAAAACGGAATGAGAATT+TGG - chr8.4:80491108-80491127 None:intergenic 35.0%
GATCAAGAACATGTAAGGAA+AGG + chr8.4:80489914-80489933 MS.gene022557:CDS 35.0%
GGAACAATTTGGGAACAAAT+GGG + chr8.4:80490696-80490715 MS.gene022557:CDS 35.0%
TAAGTTCAGTTCTTCATCAG+AGG + chr8.4:80491161-80491180 MS.gene022557:CDS 35.0%
TACCTCATAAGATGGAACAT+GGG - chr8.4:80490866-80490885 None:intergenic 35.0%
TCACTGATCACTTGTAGTAA+AGG - chr8.4:80490433-80490452 None:intergenic 35.0%
TGACAGACATATCCATGTTT+CGG - chr8.4:80490189-80490208 None:intergenic 35.0%
TGGATGCAAGTTTACAATAG+AGG + chr8.4:80490648-80490667 MS.gene022557:CDS 35.0%
TGTTCATCAACTCTTTCCAT+TGG - chr8.4:80491414-80491433 None:intergenic 35.0%
TTACCTCATAAGATGGAACA+TGG - chr8.4:80490867-80490886 None:intergenic 35.0%
! AGTTCTTTGAAGAAGACCTT+TGG - chr8.4:80490020-80490039 None:intergenic 35.0%
! CATGGTAATGAATATGACTG+AGG - chr8.4:80491204-80491223 None:intergenic 35.0%
! GTAAAATCAGTTTGGAGTTC+TGG - chr8.4:80491387-80491406 None:intergenic 35.0%
! TCATCTTCTTCTGTTTTCCA+TGG - chr8.4:80489941-80489960 None:intergenic 35.0%
AACATGTAAGGAAAGGTCCA+TGG + chr8.4:80489921-80489940 MS.gene022557:CDS 40.0%
AAGAAGACCTTTGGATCGAA+TGG - chr8.4:80490011-80490030 None:intergenic 40.0%
ACATCATTGTCTGTTCTTCC+TGG - chr8.4:80490742-80490761 None:intergenic 40.0%
AGCTTAGAGTGATTTGAAGG+TGG - chr8.4:80491570-80491589 None:intergenic 40.0%
ATGTGATCAAACATGTCCTC+TGG - chr8.4:80491543-80491562 None:intergenic 40.0%
CAGAGCTTAGAGTGATTTGA+AGG - chr8.4:80491573-80491592 None:intergenic 40.0%
CCAAACTCTGATGTTTCCAA+GGG - chr8.4:80491459-80491478 None:intergenic 40.0%
GAGGATTGTGATAGAATTGC+AGG + chr8.4:80490675-80490694 MS.gene022557:CDS 40.0%
GGAAACATCAGAGTTTGGAA+TGG + chr8.4:80491461-80491480 MS.gene022557:CDS 40.0%
GTCTGTTCTTCCTGGTAAAT+AGG - chr8.4:80490734-80490753 None:intergenic 40.0%
TAGACACATACACCGAAACA+TGG + chr8.4:80490174-80490193 MS.gene022557:intron 40.0%
TCCAAACTCTGATGTTTCCA+AGG - chr8.4:80491460-80491479 None:intergenic 40.0%
TGATCGGAATTCTCAATGCA+TGG - chr8.4:80491222-80491241 None:intergenic 40.0%
TGGAACATGGGAAGAAACTT+TGG - chr8.4:80490854-80490873 None:intergenic 40.0%
TGTAACTTCCCTCTTGAATG+CGG + chr8.4:80491073-80491092 MS.gene022557:intron 40.0%
TTCCCATGTTCCATCTTATG+AGG + chr8.4:80490861-80490880 MS.gene022557:CDS 40.0%
! AGAAGTATGGTCCAAGAGAT+TGG + chr8.4:80489981-80490000 MS.gene022557:CDS 40.0%
! TTCTGGTCTCTCTCTAAAAG+TGG + chr8.4:80490628-80490647 MS.gene022557:intron 40.0%
!! CAATTTTGATCCAACGGCTA+CGG - chr8.4:80490968-80490987 None:intergenic 40.0%
ATTTGACGTGTTTGGTCCCT+TGG + chr8.4:80491440-80491459 MS.gene022557:CDS 45.0%
CCCTTGGAAACATCAGAGTT+TGG + chr8.4:80491456-80491475 MS.gene022557:CDS 45.0%
CGTAGCCGTTGGATCAAAAT+TGG + chr8.4:80490966-80490985 MS.gene022557:intron 45.0%
GAAGTTACATATGCAGCCGT+TGG - chr8.4:80491062-80491081 None:intergenic 45.0%
GAGCAGTAGACAGAAGAGAT+TGG + chr8.4:80490774-80490793 MS.gene022557:CDS 45.0%
GTAACTTCCCTCTTGAATGC+GGG + chr8.4:80491074-80491093 MS.gene022557:intron 45.0%
TCACATTCCCGCATTCAAGA+GGG - chr8.4:80491084-80491103 None:intergenic 45.0%
! CAAGTCTTGTCGTCTTCGTT+GGG + chr8.4:80490042-80490061 MS.gene022557:CDS 45.0%
! GTAGACAGAAGAGATTGGCT+AGG + chr8.4:80490779-80490798 MS.gene022557:CDS 45.0%
!! TTAAAAAAAAATTAAAGAAT+TGG - chr8.4:80490364-80490383 None:intergenic 5.0%
ATCCGAGCAACCTAGTTTCG+AGG + chr8.4:80491278-80491297 MS.gene022557:CDS 50.0%
CGAATGGAGCTCCAATCTCT+TGG - chr8.4:80489995-80490014 None:intergenic 50.0%
GTCACATTCCCGCATTCAAG+AGG - chr8.4:80491085-80491104 None:intergenic 50.0%
TGGAGCTCCATTCGATCCAA+AGG + chr8.4:80490001-80490020 MS.gene022557:CDS 50.0%
! GCAAGTCTTGTCGTCTTCGT+TGG + chr8.4:80490041-80490060 MS.gene022557:CDS 50.0%
!! GTTTGGAGTTCTGGGATCTG+AGG - chr8.4:80491378-80491397 None:intergenic 50.0%
CGAGCAACCTAGTTTCGAGG+CGG + chr8.4:80491281-80491300 MS.gene022557:CDS 55.0%
CGCCTCGAAACTAGGTTGCT+CGG - chr8.4:80491283-80491302 None:intergenic 55.0%
TGATCCAACGGCTACGGATG+TGG - chr8.4:80490962-80490981 None:intergenic 55.0%
TTTGCGTCCGCCTCGAAACT+AGG - chr8.4:80491291-80491310 None:intergenic 55.0%
AACGGCTACGGATGTGGCTG+AGG - chr8.4:80490956-80490975 None:intergenic 60.0%
ACGGCTACGGATGTGGCTGA+GGG - chr8.4:80490955-80490974 None:intergenic 60.0%
TCAGCCACATCCGTAGCCGT+TGG + chr8.4:80490955-80490974 MS.gene022557:intron 60.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 80489899 80491593 80489899 ID=MS.gene022557
chr8.4 mRNA 80489899 80491593 80489899 ID=MS.gene022557.t1;Parent=MS.gene022557
chr8.4 exon 80489899 80490092 80489899 ID=MS.gene022557.t1.exon1;Parent=MS.gene022557.t1
chr8.4 CDS 80489899 80490092 80489899 ID=cds.MS.gene022557.t1;Parent=MS.gene022557.t1
chr8.4 exon 80490648 80490882 80490648 ID=MS.gene022557.t1.exon2;Parent=MS.gene022557.t1
chr8.4 CDS 80490648 80490882 80490648 ID=cds.MS.gene022557.t1;Parent=MS.gene022557.t1
chr8.4 exon 80491153 80491593 80491153 ID=MS.gene022557.t1.exon3;Parent=MS.gene022557.t1
chr8.4 CDS 80491153 80491593 80491153 ID=cds.MS.gene022557.t1;Parent=MS.gene022557.t1
Gene Sequence

>MS.gene022557

ATGCATGGGAAAAAAGATCAAGAACATGTAAGGAAAGGTCCATGGAAAACAGAAGAAGATGAAGTGTTACTTCATCATGTGAAGAAGTATGGTCCAAGAGATTGGAGCTCCATTCGATCCAAAGGTCTTCTTCAAAGAACTGGCAAGTCTTGTCGTCTTCGTTGGGTCAATAAACTTCGACCAAACCTCAAAAAGTATGTTATCCTTACTTCACTTTCATCTCTCTTCTCATTATAGTTTTTGTTTTGTTGCTTGTAATCGCAATCTATGAAACATAGACACATACACCGAAACATGGATATGTCTGTCACTCGACACTGACATTGAAAATTATTTGAGAAAATGAGATAATTAAACGAAATTATGTGTTGTAGATGTTTTTTCTTCATTGCTTGAAAAATATAATTTCGCTTTGGTGTTGTTTTATGAAAATTTACAATCATAGGGTTGCTTCTTTATGTTCCAATTCTTTAATTTTTTTTTAAGTTTAAATAAGAAATTTCTTTCATGGGTTGTCTCATTTTTGTCGAGCCTTTACTACAAGTGATCAGTGAAGTTTCTTCTCTTGATATTTAGTATTATGGATCCAATTCTCCATCGATTGTTCATAATTTTAATACACTTGCATAGTACATTGGTGCATGTTTGGTTACTTAAGTTTACATCGTTCAAATTAATTATTTGATGGGTTTTTATTGATTGGTATAGTTATTTATTTGATTTTTGTGTTTCTGGTCTCTCTCTAAAAGTGGATGCAAGTTTACAATAGAGGAAGAGAGGATTGTGATAGAATTGCAGGAACAATTTGGGAACAAATGGGCTAAGATTGCATCCTATTTACCAGGAAGAACAGACAATGATGTCAAAAATTTCTGGAGCAGTAGACAGAAGAGATTGGCTAGGCTTCTCAAAACATCATCATCAACAACCTCAAAGTCACAAAAAAACAAAGCCAAAGTTTCTTCCCATGTTCCATCTTATGAGGTAATTACAAAACACAATGGTTACTCTTTTTCTTGTCTTTTCTTCGAATTCGTGTTCTCTGCATTCTCACCCTCAGCCACATCCGTAGCCGTTGGATCAAAATTGGACAATGTTGATTTCAAACTCAATATTTAATTTTTTTAAAATATAAAAAATATGCATTGTCTGATCTTGATCCAACGGCTGCATATGTAACTTCCCTCTTGAATGCGGGAATGTGACCCAAATTCTCATTCCGTTTTCTCTAAAATTCTTATATTTTTATTGAAGGTTCCTTATAAGTTCAGTTCTTCATCAGAGGGAGAAACATCATCAAAGCCTCAGTCATATTCATTACCATGCATTGAGAATTCCGATCAAGTTATCAAAATAGTTCCATTATTGGATCTTAAAAAATCCGAGCAACCTAGTTTCGAGGCGGACGCAAATTACGTTGAACAAGAGCTCACCCTTTTTGATCAGAGCTATAAAAGCACTGAACACATTGCATTTCCTCAGATCCCAGAACTCCAAACTGATTTTACTTTTCCAATGGAAAGAGTTGATGAACACCATTTATTTGACGTGTTTGGTCCCTTGGAAACATCAGAGTTTGGAATGGTTCCTTTTTTTGAGCCATTAAGGAGTTTCAAAATTGATAATTTCTTTGATGATTTTCCAGAGGACATGTTTGATCACATTGAGCCACCTTCAAATCACTCTAAGCTCTGA
Protein sequence

>MS.gene022557.t1

MHGKKDQEHVRKGPWKTEEDEVLLHHVKKYGPRDWSSIRSKGLLQRTGKSCRLRWVNKLRPNLKNGCKFTIEEERIVIELQEQFGNKWAKIASYLPGRTDNDVKNFWSSRQKRLARLLKTSSSTTSKSQKNKAKVSSHVPSYEVPYKFSSSSEGETSSKPQSYSLPCIENSDQVIKIVPLLDLKKSEQPSFEADANYVEQELTLFDQSYKSTEHIAFPQIPELQTDFTFPMERVDEHHLFDVFGPLETSEFGMVPFFEPLRSFKIDNFFDDFPEDMFDHIEPPSNHSKL