Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022618.t1 | KEH17877.1 | 94.5 | 1013 | 49 | 4 | 1 | 1007 | 1 | 1012 | 0.00E+00 | 1901.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022618.t1 | O00311 | 23.3 | 544 | 314 | 13 | 507 | 979 | 58 | 569 | 3.7e-23 | 112.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022618.t1 | A0A072TKD6 | 94.5 | 1013 | 49 | 4 | 1 | 1007 | 1 | 1012 | 0.0e+00 | 1901.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022618.t1 | MTR_8g007150 | 94.390 | 1016 | 44 | 4 | 1 | 1007 | 1 | 1012 | 0.0 | 1923 |
| MS.gene022618.t1 | MTR_8g007150 | 81.752 | 1096 | 102 | 10 | 1 | 1007 | 1 | 1087 | 0.0 | 1729 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022618.t1 | AT4G16970 | 54.653 | 505 | 204 | 7 | 494 | 994 | 388 | 871 | 2.96e-180 | 547 |
Find 243 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGTTCAGATCTCAGTTTC+AGG | 0.190414 | 8.4:-79622013 | MS.gene022618:CDS |
| CGGAATATGCTTGAGCGTTT+TGG | 0.199917 | 8.4:-79624883 | MS.gene022618:CDS |
| AATACCTTAACGAAAATTTC+TGG | 0.203122 | 8.4:+79627929 | None:intergenic |
| CTCTTCACTGCCCCGCAATT+TGG | 0.205385 | 8.4:+79621815 | None:intergenic |
| AGGCTCTAACATCCAATAAA+AGG | 0.206842 | 8.4:-79623534 | MS.gene022618:CDS |
| AGTGAAACGGAGTTGAATTT+TGG | 0.214768 | 8.4:+79628128 | None:intergenic |
| ATGGATTGCTTTGACTCATT+TGG | 0.234727 | 8.4:-79626670 | MS.gene022618:CDS |
| CATTCATCTACGGTTGCTTT+GGG | 0.247411 | 8.4:-79623142 | MS.gene022618:CDS |
| ATTAAATCAAACAATGATTT+CGG | 0.255407 | 8.4:+79620912 | None:intergenic |
| TTAAATCAAACAATGATTTC+GGG | 0.265622 | 8.4:+79620913 | None:intergenic |
| AACATTATCAAATTTGTTAC+AGG | 0.266909 | 8.4:+79626072 | None:intergenic |
| TTTGAGTCTCGGATTGTAAA+TGG | 0.273704 | 8.4:-79626997 | MS.gene022618:CDS |
| ACATTCATCTACGGTTGCTT+TGG | 0.289832 | 8.4:-79623143 | MS.gene022618:CDS |
| AGAAGATCCGACAGATGTTT+TGG | 0.291136 | 8.4:-79626446 | MS.gene022618:CDS |
| TGGATTGCTTTGACTCATTT+GGG | 0.302207 | 8.4:-79626669 | MS.gene022618:CDS |
| CTTTCTTCCTTTGAAAGGTA+TGG | 0.302394 | 8.4:+79623306 | None:intergenic |
| AGAAGAGCCAACAAAAGTTT+TGG | 0.311700 | 8.4:-79626287 | MS.gene022618:CDS |
| AGCAAATTGACTTGCGTTTA+CGG | 0.311768 | 8.4:+79628104 | None:intergenic |
| CGAGAGAAAAGGAAGTTTCC+AGG | 0.319522 | 8.4:+79624216 | None:intergenic |
| TATTCCTTGGGTTTACTGTT+AGG | 0.322982 | 8.4:+79620880 | None:intergenic |
| TAAATTCGCAACAGCCTTAT+CGG | 0.327666 | 8.4:+79623420 | None:intergenic |
| GATATTTCTTTAGGTGGTTA+TGG | 0.330159 | 8.4:-79625461 | MS.gene022618:intron |
| GGGCATGCATGTATTAGATT+TGG | 0.331939 | 8.4:-79626254 | MS.gene022618:CDS |
| TTCCTCCAAGATTCTTGTCT+TGG | 0.332691 | 8.4:+79623560 | None:intergenic |
| GAGCTACTTTATTGTTAGAC+TGG | 0.342320 | 8.4:+79625975 | None:intergenic |
| CTTTGAAAGGTATGGGTTCT+CGG | 0.344019 | 8.4:+79623314 | None:intergenic |
| TAATTAACCAATCCTTCCTT+TGG | 0.344266 | 8.4:+79626526 | None:intergenic |
| GTCCTTCTTCTCAGAGGAAA+AGG | 0.345324 | 8.4:-79623225 | MS.gene022618:CDS |
| TGCGGGGCAGTGAAGAGCTT+TGG | 0.350904 | 8.4:-79621809 | MS.gene022618:CDS |
| AAAAGAAATTGCCAAATTGC+GGG | 0.357929 | 8.4:-79621826 | MS.gene022618:CDS |
| GCGAGTTGCGGTGGTGGTTC+CGG | 0.362514 | 8.4:+79628391 | None:intergenic |
| GAAGGTTTCAGAAGCTGCTT+TGG | 0.362927 | 8.4:+79626163 | None:intergenic |
| TAGAAATCCGTTACTGTTAA+CGG | 0.364241 | 8.4:+79628204 | None:intergenic |
| AATGATGATGTTGTTGGTAT+TGG | 0.365035 | 8.4:-79626706 | MS.gene022618:CDS |
| TCACCAATTGCAAGCCGTTT+CGG | 0.366080 | 8.4:+79627959 | None:intergenic |
| GATTCAATTGGAGAATGTTC+AGG | 0.367519 | 8.4:-79626946 | MS.gene022618:CDS |
| CATTACACAAAGATTGATCT+TGG | 0.372033 | 8.4:+79626725 | None:intergenic |
| TATTGGATCAGAGGACAAAA+TGG | 0.381016 | 8.4:-79626689 | MS.gene022618:CDS |
| CCTATACGTATTGATTCAAT+TGG | 0.381191 | 8.4:-79626958 | MS.gene022618:CDS |
| CAGAACCGAATTTAAAATAC+AGG | 0.382659 | 8.4:-79626918 | MS.gene022618:CDS |
| TTAACGGAGAGAGGAGAATC+AGG | 0.386785 | 8.4:+79628220 | None:intergenic |
| GCAAATTGACTTGCGTTTAC+GGG | 0.391662 | 8.4:+79628105 | None:intergenic |
| AGGGCCCTAAGGTTGATATT+TGG | 0.397053 | 8.4:-79621993 | MS.gene022618:CDS |
| CTCTACTATACATGCTGATT+GGG | 0.397374 | 8.4:-79621957 | MS.gene022618:CDS |
| CTTTGTGTGCAACTTGCACC+AGG | 0.400113 | 8.4:+79620959 | None:intergenic |
| TCAACACTAATCCTATTCCT+TGG | 0.401290 | 8.4:+79620867 | None:intergenic |
| TAACAGTAAACCCAAGGAAT+AGG | 0.401457 | 8.4:-79620878 | MS.gene022618:CDS |
| ATAGAGGAAGAAGAAGGTTC+AGG | 0.401686 | 8.4:-79625554 | MS.gene022618:intron |
| CAACACTAATCCTATTCCTT+GGG | 0.403336 | 8.4:+79620868 | None:intergenic |
| TAAAGAGGAAAGAGGTTTGA+AGG | 0.404692 | 8.4:-79626383 | MS.gene022618:CDS |
| GCGGGGCAGTGAAGAGCTTT+GGG | 0.404708 | 8.4:-79621808 | MS.gene022618:CDS |
| AGGATGCTTCAACGAGGTCT+TGG | 0.407582 | 8.4:-79620789 | MS.gene022618:CDS |
| CCAATTGAATCAATACGTAT+AGG | 0.408213 | 8.4:+79626958 | None:intergenic |
| AACTGTATTATAAAGTTTGA+AGG | 0.410114 | 8.4:-79624772 | MS.gene022618:CDS |
| AGTGACTCGGTTAGAATTTG+AGG | 0.413649 | 8.4:+79626097 | None:intergenic |
| TTTCTTCCTTTGAAAGGTAT+GGG | 0.416112 | 8.4:+79623307 | None:intergenic |
| ACTAATGAAGAAACTCTCAT+TGG | 0.417441 | 8.4:+79626831 | None:intergenic |
| AAAAGGGTTACTGCTCCTTC+AGG | 0.418092 | 8.4:-79623208 | MS.gene022618:CDS |
| TTCCTACGATCTGCCAGATC+TGG | 0.424122 | 8.4:+79623505 | None:intergenic |
| CAGTGAAGAGCTTTGGGAGG+TGG | 0.427916 | 8.4:-79621802 | MS.gene022618:CDS |
| GCAACGTAACGGACGAAATC+CGG | 0.428405 | 8.4:+79628250 | None:intergenic |
| GCTCCTTCAGGCAAGGTAGA+TGG | 0.430458 | 8.4:-79623196 | MS.gene022618:CDS |
| ACTCTACTATACATGCTGAT+TGG | 0.431671 | 8.4:-79621958 | MS.gene022618:CDS |
| GGATCTTCTCCGCATGCTAC+AGG | 0.436402 | 8.4:+79626460 | None:intergenic |
| GATCCGAAACGGCTTGCAAT+TGG | 0.437310 | 8.4:-79627962 | MS.gene022618:CDS |
| CCGCTTCTTCAACGCTTCGC+CGG | 0.437967 | 8.4:-79628269 | MS.gene022618:CDS |
| CCCTACTGTGGATGGTGAAA+AGG | 0.438053 | 8.4:-79626620 | MS.gene022618:CDS |
| AGACGGGAGAGGAATATTAC+TGG | 0.438464 | 8.4:+79623600 | None:intergenic |
| GAAACCTTCTCGCACATTGA+AGG | 0.438686 | 8.4:-79626149 | MS.gene022618:CDS |
| AGTAATATTCCTCTCCCGTC+TGG | 0.446156 | 8.4:-79623598 | MS.gene022618:CDS |
| TTCTCTCGAAAGCTAAAGAA+AGG | 0.446434 | 8.4:-79624201 | MS.gene022618:CDS |
| GAGGAGAGAGAGGAGGTGCC+AGG | 0.448642 | 8.4:+79628339 | None:intergenic |
| CGTCGACGGGATGACCGATC+TGG | 0.449155 | 8.4:+79628314 | None:intergenic |
| ATTATAAAAGATTCAAAAGA+TGG | 0.450944 | 8.4:+79625575 | None:intergenic |
| TTGTGTAATGATGATGTTGT+TGG | 0.453868 | 8.4:-79626712 | MS.gene022618:CDS |
| GCCGACCAAATATCAACCTT+AGG | 0.456009 | 8.4:+79621988 | None:intergenic |
| TATTCCGCTCATTATTTACA+TGG | 0.456851 | 8.4:+79624899 | None:intergenic |
| AAGGTTGATATTTGGTCGGC+TGG | 0.458152 | 8.4:-79621985 | MS.gene022618:CDS |
| GTGGTCCAAGACAAGAATCT+TGG | 0.458901 | 8.4:-79623565 | MS.gene022618:CDS |
| TTTGAAGGTTCTTTCAAAAG+TGG | 0.458914 | 8.4:-79624757 | MS.gene022618:CDS |
| GTGCAATGAAATTTGAGTCT+CGG | 0.462949 | 8.4:-79627008 | MS.gene022618:CDS |
| GATTGATCTTGGACACTAGT+TGG | 0.465730 | 8.4:+79626736 | None:intergenic |
| AACAAAGGGTTTCCGTGCCC+CGG | 0.466552 | 8.4:-79622974 | MS.gene022618:CDS |
| TAAAAGGGAATTGCCAGATC+TGG | 0.468469 | 8.4:-79623518 | MS.gene022618:CDS |
| GGCTCTTCTCCACATACTAC+AGG | 0.475497 | 8.4:+79626301 | None:intergenic |
| CTTAGTGCTAGTAACATCTC+TGG | 0.475547 | 8.4:+79623357 | None:intergenic |
| TCCAATTCCAAAACATCTGT+CGG | 0.478188 | 8.4:+79626439 | None:intergenic |
| AACATTATTGAAGGTGATGA+AGG | 0.478543 | 8.4:-79626019 | MS.gene022618:CDS |
| AATGATCAGAACATTATTGA+AGG | 0.479243 | 8.4:-79626028 | MS.gene022618:CDS |
| AAATTCGCAACAGCCTTATC+GGG | 0.479709 | 8.4:+79623421 | None:intergenic |
| TTGTTCAGATCTCAGTTTCA+GGG | 0.479868 | 8.4:-79622012 | MS.gene022618:CDS |
| GGCTCTAACATCCAATAAAA+GGG | 0.480027 | 8.4:-79623533 | MS.gene022618:CDS |
| GGTCCATGTGTTGGAACAAA+GGG | 0.481545 | 8.4:-79622988 | MS.gene022618:CDS |
| GCAACCGTAGATGAATGTAT+AGG | 0.482776 | 8.4:+79623148 | None:intergenic |
| CACTCCTCGAAGACCAATCC+TGG | 0.482873 | 8.4:-79628357 | MS.gene022618:CDS |
| AGATTCTTGTCTTGGACCAC+AGG | 0.483607 | 8.4:+79623568 | None:intergenic |
| AGCTCCTTTCTTCCTTTGAA+AGG | 0.484570 | 8.4:+79623301 | None:intergenic |
| CCGACCAAATATCAACCTTA+GGG | 0.486366 | 8.4:+79621989 | None:intergenic |
| CCACTGGAAAGGATGTTTCA+CGG | 0.486521 | 8.4:+79621766 | None:intergenic |
| ATTGGGAAAACTTCTTTCCC+TGG | 0.486809 | 8.4:-79621940 | MS.gene022618:CDS |
| ATCTCAGTTTCAGGGCCCTA+AGG | 0.486826 | 8.4:-79622004 | MS.gene022618:CDS |
| GAAAGATACTCCGCGTCGAC+GGG | 0.487994 | 8.4:+79628301 | None:intergenic |
| GGATCGGCGAGTTGCGGTGG+TGG | 0.491104 | 8.4:+79628385 | None:intergenic |
| TCTTTAGCTTTCGAGAGAAA+AGG | 0.491702 | 8.4:+79624205 | None:intergenic |
| GATGGAAGATGTTGCTCAAA+GGG | 0.492219 | 8.4:-79626488 | MS.gene022618:CDS |
| GAGAGAGGAGGTGCCAGGAT+TGG | 0.493624 | 8.4:+79628344 | None:intergenic |
| AAGAGGTCCAAAGGAAGGAT+TGG | 0.493708 | 8.4:-79626533 | MS.gene022618:CDS |
| CAAGAATCTTGGAGGAATCA+AGG | 0.494455 | 8.4:-79623554 | MS.gene022618:CDS |
| TTTATAATAGAGGAAGAAGA+AGG | 0.495240 | 8.4:-79625560 | MS.gene022618:CDS |
| TTACTGGATGCATCAAGCCT+TGG | 0.496091 | 8.4:+79623616 | None:intergenic |
| GAGGAAAGAGGTTTGAAGGA+AGG | 0.496387 | 8.4:-79626379 | MS.gene022618:CDS |
| AGCACAAGGAGCAGATGGCT+CGG | 0.498407 | 8.4:-79623392 | MS.gene022618:CDS |
| CTCTCTCTCCTCCTCCAGAT+CGG | 0.499013 | 8.4:-79628328 | MS.gene022618:CDS |
| ATATGTGAGCTTCAGTGGTA+TGG | 0.499209 | 8.4:-79624389 | MS.gene022618:CDS |
| AAACCTTCTCGCACATTGAA+GGG | 0.499606 | 8.4:-79626148 | MS.gene022618:CDS |
| AAGCTGCTTTCGCCATGGCT+AGG | 0.503048 | 8.4:-79628168 | MS.gene022618:CDS |
| GCACAAGGAGCAGATGGCTC+GGG | 0.506807 | 8.4:-79623391 | MS.gene022618:CDS |
| TAAAAGAAATTGCCAAATTG+CGG | 0.506980 | 8.4:-79621827 | MS.gene022618:CDS |
| CGTTGAAGCTGCTTTCGCCA+TGG | 0.511259 | 8.4:-79628173 | MS.gene022618:CDS |
| TTGCGTTTACGGGAGTGAAA+CGG | 0.511839 | 8.4:+79628115 | None:intergenic |
| CATACCTTTCAAAGGAAGAA+AGG | 0.513266 | 8.4:-79623305 | MS.gene022618:CDS |
| GGGACTTTATCAACAAACTC+TGG | 0.518146 | 8.4:+79620933 | None:intergenic |
| TCCTTCTTCTCAGAGGAAAA+GGG | 0.519310 | 8.4:-79623224 | MS.gene022618:CDS |
| TTAGTGTTGAAGATGTTCTC+AGG | 0.521851 | 8.4:-79620854 | MS.gene022618:CDS |
| ATGGTCAAAGGAGAGATATC+TGG | 0.525173 | 8.4:-79626868 | MS.gene022618:CDS |
| TATGTGAGCTTCAGTGGTAT+GGG | 0.526504 | 8.4:-79624388 | MS.gene022618:CDS |
| TGAAATTCGTAAGCATATGA+AGG | 0.528442 | 8.4:-79623476 | MS.gene022618:CDS |
| TATTGAAGGTGATGAAGGTA+AGG | 0.529301 | 8.4:-79626014 | MS.gene022618:CDS |
| GTTCACAGAGATGTTAAACC+TGG | 0.530796 | 8.4:-79624234 | MS.gene022618:CDS |
| AGCTACTTTATTGTTAGACT+GGG | 0.530901 | 8.4:+79625976 | None:intergenic |
| TGGTCTTCGAGGAGTGGAGT+TGG | 0.531805 | 8.4:+79628364 | None:intergenic |
| CATGGCGAAAGCAGCTTCAA+CGG | 0.534287 | 8.4:+79628174 | None:intergenic |
| AAACCCTTTGTTCCAACACA+TGG | 0.534397 | 8.4:+79622985 | None:intergenic |
| CATCAGTTGTTCTATGAGCA+CGG | 0.536001 | 8.4:+79625429 | None:intergenic |
| AGAAGAGAAAAGAGGTCCAA+AGG | 0.536493 | 8.4:-79626542 | MS.gene022618:CDS |
| CGTGCTCATAGAACAACTGA+TGG | 0.537080 | 8.4:-79625428 | MS.gene022618:CDS |
| TGGCAAGGTTGAAGTCGATA+AGG | 0.538478 | 8.4:+79624175 | None:intergenic |
| GAGAAAAGAGGTCCAAAGGA+AGG | 0.538859 | 8.4:-79626538 | MS.gene022618:CDS |
| ATAAATAAAGAAGAGAAAAG+AGG | 0.539398 | 8.4:-79626550 | MS.gene022618:CDS |
| TTGATATATGTGAGCTTCAG+TGG | 0.539584 | 8.4:-79624394 | MS.gene022618:CDS |
| TGTTTCACGGTCATGCAGCT+TGG | 0.540699 | 8.4:+79621779 | None:intergenic |
| AACATAACCCCTACTGTGGA+TGG | 0.541969 | 8.4:-79626628 | MS.gene022618:CDS |
| CCCTAAGGTTGATATTTGGT+CGG | 0.545440 | 8.4:-79621989 | MS.gene022618:CDS |
| ATGAAGGCAAAAGCGGATGC+TGG | 0.545882 | 8.4:-79623460 | MS.gene022618:CDS |
| CGATCTGGAGGAGGAGAGAG+AGG | 0.549243 | 8.4:+79628329 | None:intergenic |
| CCGGCGAAGCGTTGAAGAAG+CGG | 0.552425 | 8.4:+79628269 | None:intergenic |
| TTCGAGGAGTGGAGTTGGAT+CGG | 0.552545 | 8.4:+79628369 | None:intergenic |
| AAGCTGCTTTGGATTTGAAG+AGG | 0.554463 | 8.4:+79626174 | None:intergenic |
| GTAGATGAATGTATAGGCAT+TGG | 0.557803 | 8.4:+79623154 | None:intergenic |
| GGAAAGATACTCCGCGTCGA+CGG | 0.560979 | 8.4:+79628300 | None:intergenic |
| GGGTCCATGTGTTGGAACAA+AGG | 0.561472 | 8.4:-79622989 | MS.gene022618:CDS |
| CGTTGAAGAAGCGGCAACGA+AGG | 0.561497 | 8.4:+79628278 | None:intergenic |
| AGATGGAAGATGTTGCTCAA+AGG | 0.563134 | 8.4:-79626489 | MS.gene022618:CDS |
| AAGAATTTACCTCCGGGGCA+CGG | 0.563272 | 8.4:+79622962 | None:intergenic |
| GATTCTTGTCTTGGACCACA+GGG | 0.566206 | 8.4:+79623569 | None:intergenic |
| CCTCTCTCCGTTAACAGTAA+CGG | 0.568053 | 8.4:-79628211 | MS.gene022618:CDS |
| GGGGAAGAACCAGACGGGAG+AGG | 0.568805 | 8.4:+79623589 | None:intergenic |
| CGTAGAGCACAAGGAGCAGA+TGG | 0.571518 | 8.4:-79623397 | MS.gene022618:CDS |
| TATGGGTTCTCGGAGCCTAT+CGG | 0.573323 | 8.4:+79623324 | None:intergenic |
| CTAAGACTGCTTCTGCCGAT+AGG | 0.573679 | 8.4:-79623339 | MS.gene022618:CDS |
| TTATGAGAATGATAGAGAGA+TGG | 0.574463 | 8.4:-79626506 | MS.gene022618:CDS |
| CCGTTACTGTTAACGGAGAG+AGG | 0.575451 | 8.4:+79628211 | None:intergenic |
| AAAAGAGAGGGTCCATGTGT+TGG | 0.577815 | 8.4:-79622997 | MS.gene022618:CDS |
| GTCCAAGACAAGAATCTTGG+AGG | 0.578441 | 8.4:-79623562 | MS.gene022618:CDS |
| CGGGATGACCGATCTGGAGG+AGG | 0.579997 | 8.4:+79628320 | None:intergenic |
| TTGGGGTTATTAAGAAGCAA+AGG | 0.581215 | 8.4:-79623124 | MS.gene022618:intron |
| TTTGTTACAGGCTAGTGACT+CGG | 0.581585 | 8.4:+79626084 | None:intergenic |
| CTGCCATCTACCTTGCCTGA+AGG | 0.582954 | 8.4:+79623193 | None:intergenic |
| AAAGGAATTTACCACTGGAA+AGG | 0.583882 | 8.4:+79621755 | None:intergenic |
| TATCGACTTCAACCTTGCCA+TGG | 0.583985 | 8.4:-79624172 | MS.gene022618:intron |
| CCGATCCAAAATGTCTCCGC+CGG | 0.584581 | 8.4:-79628410 | None:intergenic |
| AACCTTCTCGCACATTGAAG+GGG | 0.587830 | 8.4:-79626147 | MS.gene022618:CDS |
| CAGGATTGGTCTTCGAGGAG+TGG | 0.587880 | 8.4:+79628358 | None:intergenic |
| GTTGGATCGGCGAGTTGCGG+TGG | 0.588249 | 8.4:+79628382 | None:intergenic |
| CGAGGGTCTAGATAGATTCG+TGG | 0.588972 | 8.4:-79626788 | MS.gene022618:CDS |
| TGGTGGAGCAAGATTAGCAA+AGG | 0.589902 | 8.4:+79626756 | None:intergenic |
| TGTCATATGATTGCAAGTAT+CGG | 0.590214 | 8.4:+79620988 | None:intergenic |
| TGATCTTGGACACTAGTTGG+TGG | 0.590604 | 8.4:+79626739 | None:intergenic |
| GCGAAAGCAGCTTCAACGGA+AGG | 0.591262 | 8.4:+79628178 | None:intergenic |
| GATGGAAGATGTTGCTCTGA+GGG | 0.592593 | 8.4:-79626329 | MS.gene022618:CDS |
| CGAGAACCCATACCTTTCAA+AGG | 0.593233 | 8.4:-79623313 | MS.gene022618:CDS |
| GCTAGTAACATCTCTGGCAG+AGG | 0.593503 | 8.4:+79623363 | None:intergenic |
| GGTGCCAGGATTGGTCTTCG+AGG | 0.593716 | 8.4:+79628353 | None:intergenic |
| CTTCAGGCAAGGTAGATGGC+AGG | 0.594037 | 8.4:-79623192 | MS.gene022618:CDS |
| CAGGTGGAAGAGATCCGAAA+CGG | 0.595991 | 8.4:-79627973 | MS.gene022618:CDS |
| GGTGGAGCAAGATTAGCAAA+GGG | 0.597178 | 8.4:+79626757 | None:intergenic |
| AATGCCTATACATTCATCTA+CGG | 0.599137 | 8.4:-79623152 | MS.gene022618:CDS |
| AGTCTCGGATTGTAAATGGT+GGG | 0.602244 | 8.4:-79626993 | MS.gene022618:CDS |
| TCAATTTGCTCAATCACTCA+AGG | 0.603232 | 8.4:-79628091 | MS.gene022618:intron |
| GTTGAAGAAGCGGCAACGAA+GGG | 0.603458 | 8.4:+79628279 | None:intergenic |
| CCACAGGGGAAGAACCAGAC+GGG | 0.606761 | 8.4:+79623584 | None:intergenic |
| ACCTTCTCGCACATTGAAGG+GGG | 0.609586 | 8.4:-79626146 | MS.gene022618:CDS |
| GGCATAACAAGCATGGTCAA+AGG | 0.610521 | 8.4:-79626880 | MS.gene022618:CDS |
| GAGTCTCGGATTGTAAATGG+TGG | 0.614229 | 8.4:-79626994 | MS.gene022618:CDS |
| TGCCAGATCTGGCAGATCGT+AGG | 0.614643 | 8.4:-79623507 | MS.gene022618:CDS |
| GCGAATTTACGTAGAGCACA+AGG | 0.616884 | 8.4:-79623406 | MS.gene022618:CDS |
| CCCGTCTGGTTCTTCCCCTG+TGG | 0.618731 | 8.4:-79623584 | MS.gene022618:CDS |
| GGGCAGTGAAGAGCTTTGGG+AGG | 0.619718 | 8.4:-79621805 | MS.gene022618:CDS |
| ATTCATCTACGGTTGCTTTG+GGG | 0.621492 | 8.4:-79623141 | MS.gene022618:CDS |
| AGTTGCGGTGGTGGTTCCGG+CGG | 0.621987 | 8.4:+79628394 | None:intergenic |
| TACAGGGAAGCTGATAATGA+CGG | 0.629467 | 8.4:-79626901 | MS.gene022618:CDS |
| TAAGCATATGAAGGCAAAAG+CGG | 0.635350 | 8.4:-79623467 | MS.gene022618:CDS |
| GGTTACTGCTCCTTCAGGCA+AGG | 0.636110 | 8.4:-79623203 | MS.gene022618:CDS |
| CGACGGGATGACCGATCTGG+AGG | 0.637015 | 8.4:+79628317 | None:intergenic |
| GGAGTTGGATCGGCGAGTTG+CGG | 0.637588 | 8.4:+79628379 | None:intergenic |
| TGAAAAGTCCTTCTTCTCAG+AGG | 0.638414 | 8.4:-79623231 | MS.gene022618:CDS |
| AGGGTGAATCCTGTAGTATG+TGG | 0.639774 | 8.4:-79626310 | MS.gene022618:CDS |
| GACGGAAAACATAAAAGAGA+GGG | 0.640908 | 8.4:-79623009 | MS.gene022618:CDS |
| GAGGGTCTAGATAGATTCGT+GGG | 0.642595 | 8.4:-79626787 | MS.gene022618:CDS |
| ACTTGCGTGCTTGCACAAAG+AGG | 0.643572 | 8.4:-79624348 | MS.gene022618:intron |
| AAGTGACTCGAGGAAGCTCG+AGG | 0.646512 | 8.4:-79626806 | MS.gene022618:CDS |
| TGTTGTTGGTATTGGATCAG+AGG | 0.649031 | 8.4:-79626698 | MS.gene022618:CDS |
| TTTACTGTTCTGGTTCGCCA+GGG | 0.650022 | 8.4:+79621923 | None:intergenic |
| AAAGAAATTGCCAAATTGCG+GGG | 0.650726 | 8.4:-79621825 | MS.gene022618:CDS |
| AAAACCATGTAAATAATGAG+CGG | 0.651500 | 8.4:-79624903 | MS.gene022618:CDS |
| CAGGAAGTGAAGCAACGTAA+CGG | 0.652685 | 8.4:+79628239 | None:intergenic |
| TAATGACGGCATAACAAGCA+TGG | 0.654148 | 8.4:-79626887 | MS.gene022618:CDS |
| GAAGCAACCTAACCATGGCA+AGG | 0.654219 | 8.4:+79624160 | None:intergenic |
| TGAAGGTAAGGATCAGAACA+TGG | 0.659752 | 8.4:-79626002 | MS.gene022618:CDS |
| ACTCAGGTAAATCAAAACCA+AGG | 0.660436 | 8.4:-79623633 | MS.gene022618:intron |
| AGTGCCTAACAGTAAACCCA+AGG | 0.662467 | 8.4:-79620884 | MS.gene022618:CDS |
| AGTGACTCGAGGAAGCTCGA+GGG | 0.663036 | 8.4:-79626805 | MS.gene022618:CDS |
| ACAAAACATAACCCCTACTG+TGG | 0.663994 | 8.4:-79626632 | MS.gene022618:CDS |
| GGACGGAAAACATAAAAGAG+AGG | 0.664528 | 8.4:-79623010 | MS.gene022618:CDS |
| AGAACCGAATTTAAAATACA+GGG | 0.667459 | 8.4:-79626917 | MS.gene022618:CDS |
| TTGAAGCAGAAGTACAACAT+CGG | 0.674249 | 8.4:-79624060 | MS.gene022618:CDS |
| AATCATATGACATAGAAACC+TGG | 0.675049 | 8.4:-79620977 | MS.gene022618:CDS |
| TCTGGAGGAGGAGAGAGAGG+AGG | 0.676330 | 8.4:+79628332 | None:intergenic |
| TCATTAGTGAAAGTGACTCG+AGG | 0.676728 | 8.4:-79626816 | MS.gene022618:CDS |
| ATGAGATCATGAGAAAGACA+AGG | 0.685426 | 8.4:-79620809 | MS.gene022618:CDS |
| AAAGGGTTTCCGTGCCCCGG+AGG | 0.686493 | 8.4:-79622971 | MS.gene022618:intron |
| AGGGTCGATCCTGTAGCATG+CGG | 0.686967 | 8.4:-79626469 | MS.gene022618:CDS |
| ACCACAGGGGAAGAACCAGA+CGG | 0.689092 | 8.4:+79623583 | None:intergenic |
| TCTCATGATCTCATTACACG+AGG | 0.690799 | 8.4:+79620818 | None:intergenic |
| CCGTGAAACATCCTTTCCAG+TGG | 0.691680 | 8.4:-79621766 | MS.gene022618:intron |
| AGATGGAAGATGTTGCTCTG+AGG | 0.692276 | 8.4:-79626330 | MS.gene022618:CDS |
| GATCGGTCATCCCGTCGACG+CGG | 0.695572 | 8.4:-79628311 | MS.gene022618:CDS |
| AGCGCAAGAATTTACCTCCG+GGG | 0.710001 | 8.4:+79622957 | None:intergenic |
| CCTTCTCGCACATTGAAGGG+GGG | 0.716670 | 8.4:-79626145 | MS.gene022618:CDS |
| TGTTGAGCATGAGAGACCTG+AGG | 0.737768 | 8.4:-79624707 | MS.gene022618:intron |
| ATTCTTGTCTTGGACCACAG+GGG | 0.743915 | 8.4:+79623570 | None:intergenic |
| AAGACAAGGATGCTTCAACG+AGG | 0.753636 | 8.4:-79620795 | MS.gene022618:CDS |
| ATTGCATAGAATTCTGCACG+AGG | 0.772903 | 8.4:+79623272 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 79620755 | 79628422 | 79620755 | ID=MS.gene022618 |
| chr8.4 | mRNA | 79620755 | 79628422 | 79620755 | ID=MS.gene022618.t1;Parent=MS.gene022618 |
| chr8.4 | exon | 79628092 | 79628422 | 79628092 | ID=MS.gene022618.t1.exon1;Parent=MS.gene022618.t1 |
| chr8.4 | CDS | 79628092 | 79628422 | 79628092 | ID=cds.MS.gene022618.t1;Parent=MS.gene022618.t1 |
| chr8.4 | exon | 79627934 | 79627992 | 79627934 | ID=MS.gene022618.t1.exon2;Parent=MS.gene022618.t1 |
| chr8.4 | CDS | 79627934 | 79627992 | 79627934 | ID=cds.MS.gene022618.t1;Parent=MS.gene022618.t1 |
| chr8.4 | exon | 79625982 | 79627076 | 79625982 | ID=MS.gene022618.t1.exon3;Parent=MS.gene022618.t1 |
| chr8.4 | CDS | 79625982 | 79627076 | 79625982 | ID=cds.MS.gene022618.t1;Parent=MS.gene022618.t1 |
| chr8.4 | exon | 79625555 | 79625615 | 79625555 | ID=MS.gene022618.t1.exon4;Parent=MS.gene022618.t1 |
| chr8.4 | CDS | 79625555 | 79625615 | 79625555 | ID=cds.MS.gene022618.t1;Parent=MS.gene022618.t1 |
| chr8.4 | exon | 79625408 | 79625470 | 79625408 | ID=MS.gene022618.t1.exon5;Parent=MS.gene022618.t1 |
| chr8.4 | CDS | 79625408 | 79625470 | 79625408 | ID=cds.MS.gene022618.t1;Parent=MS.gene022618.t1 |
| chr8.4 | exon | 79624883 | 79624946 | 79624883 | ID=MS.gene022618.t1.exon6;Parent=MS.gene022618.t1 |
| chr8.4 | CDS | 79624883 | 79624946 | 79624883 | ID=cds.MS.gene022618.t1;Parent=MS.gene022618.t1 |
| chr8.4 | exon | 79624708 | 79624801 | 79624708 | ID=MS.gene022618.t1.exon7;Parent=MS.gene022618.t1 |
| chr8.4 | CDS | 79624708 | 79624801 | 79624708 | ID=cds.MS.gene022618.t1;Parent=MS.gene022618.t1 |
| chr8.4 | exon | 79624349 | 79624432 | 79624349 | ID=MS.gene022618.t1.exon8;Parent=MS.gene022618.t1 |
| chr8.4 | CDS | 79624349 | 79624432 | 79624349 | ID=cds.MS.gene022618.t1;Parent=MS.gene022618.t1 |
| chr8.4 | exon | 79624173 | 79624262 | 79624173 | ID=MS.gene022618.t1.exon9;Parent=MS.gene022618.t1 |
| chr8.4 | CDS | 79624173 | 79624262 | 79624173 | ID=cds.MS.gene022618.t1;Parent=MS.gene022618.t1 |
| chr8.4 | exon | 79624058 | 79624085 | 79624058 | ID=MS.gene022618.t1.exon10;Parent=MS.gene022618.t1 |
| chr8.4 | CDS | 79624058 | 79624085 | 79624058 | ID=cds.MS.gene022618.t1;Parent=MS.gene022618.t1 |
| chr8.4 | exon | 79623125 | 79623649 | 79623125 | ID=MS.gene022618.t1.exon11;Parent=MS.gene022618.t1 |
| chr8.4 | CDS | 79623125 | 79623649 | 79623125 | ID=cds.MS.gene022618.t1;Parent=MS.gene022618.t1 |
| chr8.4 | exon | 79622972 | 79623033 | 79622972 | ID=MS.gene022618.t1.exon12;Parent=MS.gene022618.t1 |
| chr8.4 | CDS | 79622972 | 79623033 | 79622972 | ID=cds.MS.gene022618.t1;Parent=MS.gene022618.t1 |
| chr8.4 | exon | 79621928 | 79622037 | 79621928 | ID=MS.gene022618.t1.exon13;Parent=MS.gene022618.t1 |
| chr8.4 | CDS | 79621928 | 79622037 | 79621928 | ID=cds.MS.gene022618.t1;Parent=MS.gene022618.t1 |
| chr8.4 | exon | 79621767 | 79621854 | 79621767 | ID=MS.gene022618.t1.exon14;Parent=MS.gene022618.t1 |
| chr8.4 | CDS | 79621767 | 79621854 | 79621767 | ID=cds.MS.gene022618.t1;Parent=MS.gene022618.t1 |
| chr8.4 | exon | 79620755 | 79621024 | 79620755 | ID=MS.gene022618.t1.exon15;Parent=MS.gene022618.t1 |
| chr8.4 | CDS | 79620755 | 79621024 | 79620755 | ID=cds.MS.gene022618.t1;Parent=MS.gene022618.t1 |
| Gene Sequence |
| Protein sequence |
