Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022995.t1 | AES79083.2 | 87.3 | 717 | 83 | 2 | 2 | 710 | 16 | 732 | 0.00E+00 | 1184.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022995.t1 | Q9ZSM8 | 38.5 | 834 | 364 | 17 | 15 | 710 | 32 | 854 | 1.5e-143 | 511.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022995.t1 | G7L054 | 87.3 | 717 | 83 | 2 | 2 | 710 | 16 | 732 | 0.0e+00 | 1184.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene022995.t1 | TR | SET |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022995.t1 | MTR_7g055660 | 91.492 | 717 | 53 | 2 | 2 | 710 | 16 | 732 | 0.0 | 1353 |
MS.gene022995.t1 | MTR_7g109560 | 50.967 | 724 | 306 | 17 | 5 | 708 | 66 | 760 | 0.0 | 659 |
MS.gene022995.t1 | MTR_1g086980 | 44.308 | 817 | 340 | 20 | 1 | 710 | 1 | 809 | 0.0 | 632 |
MS.gene022995.t1 | MTR_1g086980 | 44.335 | 812 | 337 | 20 | 6 | 710 | 26 | 829 | 0.0 | 631 |
MS.gene022995.t1 | MTR_1g086980 | 44.335 | 812 | 337 | 20 | 6 | 710 | 16 | 819 | 0.0 | 630 |
MS.gene022995.t1 | MTR_1g086980 | 44.586 | 785 | 320 | 20 | 33 | 710 | 2 | 778 | 0.0 | 611 |
MS.gene022995.t1 | MTR_1g086980 | 44.953 | 743 | 303 | 18 | 67 | 710 | 22 | 757 | 0.0 | 592 |
MS.gene022995.t1 | MTR_1g086980 | 43.700 | 746 | 308 | 18 | 6 | 644 | 16 | 756 | 0.0 | 571 |
MS.gene022995.t1 | MTR_1g086980 | 54.608 | 434 | 169 | 9 | 299 | 710 | 202 | 629 | 1.83e-152 | 457 |
MS.gene022995.t1 | MTR_1g086980 | 49.367 | 158 | 74 | 2 | 173 | 324 | 1 | 158 | 1.31e-40 | 158 |
MS.gene022995.t1 | MTR_5g016870 | 50.230 | 434 | 198 | 10 | 283 | 709 | 440 | 862 | 8.35e-129 | 403 |
MS.gene022995.t1 | MTR_5g016870 | 30.351 | 313 | 187 | 6 | 3 | 284 | 26 | 338 | 9.27e-38 | 151 |
MS.gene022995.t1 | MTR_1g086980 | 49.836 | 305 | 128 | 7 | 299 | 581 | 330 | 631 | 6.79e-87 | 286 |
MS.gene022995.t1 | MTR_1g086980 | 44.737 | 266 | 138 | 4 | 67 | 324 | 22 | 286 | 2.62e-65 | 228 |
MS.gene022995.t1 | MTR_1g086980 | 49.836 | 305 | 128 | 7 | 299 | 581 | 392 | 693 | 9.68e-87 | 288 |
MS.gene022995.t1 | MTR_1g086980 | 43.284 | 335 | 172 | 6 | 6 | 324 | 16 | 348 | 1.74e-78 | 265 |
MS.gene022995.t1 | MTR_1g086980 | 43.284 | 335 | 172 | 6 | 6 | 324 | 16 | 348 | 7.55e-79 | 265 |
MS.gene022995.t1 | MTR_1g086980 | 47.843 | 255 | 109 | 6 | 299 | 531 | 392 | 644 | 2.73e-65 | 228 |
MS.gene022995.t1 | MTR_2g036060 | 36.364 | 132 | 81 | 2 | 555 | 683 | 1027 | 1158 | 3.08e-20 | 96.7 |
MS.gene022995.t1 | MTR_2g036060 | 36.364 | 132 | 81 | 2 | 555 | 683 | 1052 | 1183 | 3.14e-20 | 96.7 |
MS.gene022995.t1 | MTR_1g098370 | 35.625 | 160 | 83 | 4 | 519 | 676 | 75 | 216 | 3.27e-19 | 92.0 |
MS.gene022995.t1 | MTR_1g098000 | 34.524 | 168 | 90 | 4 | 511 | 676 | 64 | 213 | 4.98e-19 | 91.3 |
MS.gene022995.t1 | MTR_1g008230 | 33.582 | 134 | 87 | 2 | 549 | 680 | 603 | 736 | 2.10e-17 | 87.0 |
MS.gene022995.t1 | MTR_1g008230 | 33.582 | 134 | 87 | 2 | 549 | 680 | 881 | 1014 | 4.86e-17 | 86.3 |
MS.gene022995.t1 | MTR_0071s0100 | 32.331 | 133 | 86 | 2 | 549 | 678 | 199 | 330 | 3.19e-16 | 81.6 |
MS.gene022995.t1 | MTR_3g091310 | 34.426 | 122 | 78 | 2 | 561 | 680 | 922 | 1043 | 4.80e-16 | 83.2 |
MS.gene022995.t1 | MTR_3g091310 | 34.426 | 122 | 78 | 2 | 561 | 680 | 828 | 949 | 4.91e-16 | 82.8 |
MS.gene022995.t1 | MTR_8g064240 | 46.053 | 76 | 40 | 1 | 623 | 698 | 1 | 75 | 1.16e-15 | 73.2 |
MS.gene022995.t1 | MTR_7g021365 | 34.711 | 121 | 76 | 1 | 559 | 676 | 904 | 1024 | 1.73e-15 | 81.3 |
MS.gene022995.t1 | MTR_7g117355 | 34.146 | 123 | 79 | 2 | 561 | 681 | 823 | 945 | 1.84e-15 | 81.3 |
MS.gene022995.t1 | MTR_1g012910 | 32.540 | 126 | 79 | 1 | 557 | 676 | 360 | 485 | 2.41e-15 | 79.7 |
MS.gene022995.t1 | MTR_1g012910 | 32.540 | 126 | 79 | 1 | 557 | 676 | 523 | 648 | 3.10e-15 | 80.1 |
MS.gene022995.t1 | MTR_1g012890 | 30.709 | 127 | 82 | 1 | 557 | 677 | 220 | 346 | 1.33e-14 | 76.6 |
MS.gene022995.t1 | MTR_8g027725 | 31.967 | 122 | 81 | 2 | 561 | 680 | 808 | 929 | 2.11e-14 | 77.8 |
MS.gene022995.t1 | MTR_8g027725 | 31.967 | 122 | 81 | 2 | 561 | 680 | 793 | 914 | 2.18e-14 | 77.4 |
MS.gene022995.t1 | MTR_8g064250 | 58.065 | 62 | 24 | 2 | 648 | 708 | 8 | 68 | 7.14e-14 | 68.6 |
MS.gene022995.t1 | MTR_6g059310 | 32.231 | 121 | 80 | 2 | 560 | 678 | 112 | 232 | 1.06e-12 | 70.5 |
MS.gene022995.t1 | MTR_6g059310 | 32.231 | 121 | 80 | 2 | 560 | 678 | 112 | 232 | 1.21e-12 | 70.1 |
MS.gene022995.t1 | MTR_8g064320 | 54.839 | 62 | 26 | 2 | 648 | 708 | 10 | 70 | 1.34e-12 | 65.1 |
MS.gene022995.t1 | MTR_4g010830 | 30.814 | 172 | 80 | 5 | 539 | 677 | 787 | 952 | 1.17e-11 | 68.9 |
MS.gene022995.t1 | MTR_5g013420 | 33.533 | 167 | 70 | 6 | 548 | 680 | 905 | 1064 | 1.18e-11 | 68.9 |
MS.gene022995.t1 | MTR_5g013420 | 33.533 | 167 | 70 | 6 | 548 | 680 | 905 | 1064 | 1.23e-11 | 68.9 |
MS.gene022995.t1 | MTR_8g064310 | 52.830 | 53 | 24 | 1 | 646 | 698 | 6 | 57 | 3.88e-11 | 59.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022995.t1 | AT4G02020 | 58.760 | 371 | 137 | 7 | 349 | 710 | 491 | 854 | 2.34e-142 | 438 |
MS.gene022995.t1 | AT4G02020 | 41.754 | 285 | 151 | 6 | 17 | 290 | 34 | 314 | 5.10e-57 | 209 |
MS.gene022995.t1 | AT2G23380 | 52.427 | 412 | 164 | 10 | 322 | 709 | 271 | 674 | 6.29e-130 | 400 |
MS.gene022995.t1 | AT2G23380 | 45.556 | 90 | 46 | 3 | 199 | 287 | 7 | 94 | 4.85e-14 | 76.3 |
MS.gene022995.t1 | AT2G23380 | 56.533 | 375 | 139 | 9 | 351 | 709 | 535 | 901 | 1.98e-128 | 403 |
MS.gene022995.t1 | AT2G23380 | 35.048 | 311 | 165 | 9 | 2 | 287 | 23 | 321 | 1.09e-39 | 157 |
MS.gene022995.t1 | AT1G02580 | 38.325 | 621 | 319 | 17 | 89 | 697 | 113 | 681 | 3.40e-122 | 380 |
MS.gene022995.t1 | AT4G02020 | 58.730 | 315 | 117 | 5 | 349 | 654 | 491 | 801 | 5.76e-120 | 378 |
MS.gene022995.t1 | AT4G02020 | 41.754 | 285 | 151 | 6 | 17 | 290 | 34 | 314 | 3.79e-57 | 208 |
MS.gene022995.t1 | AT4G02020 | 58.719 | 281 | 103 | 5 | 349 | 620 | 491 | 767 | 5.90e-104 | 336 |
MS.gene022995.t1 | AT4G02020 | 41.754 | 285 | 151 | 6 | 17 | 290 | 34 | 314 | 2.87e-57 | 209 |
MS.gene022995.t1 | AT4G02020 | 58.719 | 281 | 103 | 5 | 349 | 620 | 491 | 767 | 5.90e-104 | 336 |
MS.gene022995.t1 | AT4G02020 | 41.754 | 285 | 151 | 6 | 17 | 290 | 34 | 314 | 2.87e-57 | 209 |
MS.gene022995.t1 | AT1G02580 | 35.503 | 507 | 261 | 17 | 89 | 581 | 113 | 567 | 1.95e-79 | 265 |
MS.gene022995.t1 | AT5G42400 | 30.928 | 194 | 121 | 4 | 493 | 683 | 1192 | 1375 | 3.84e-19 | 93.2 |
MS.gene022995.t1 | AT5G42400 | 30.928 | 194 | 121 | 4 | 493 | 683 | 1192 | 1375 | 3.84e-19 | 93.2 |
MS.gene022995.t1 | AT5G42400 | 30.928 | 194 | 121 | 4 | 493 | 683 | 1192 | 1375 | 3.84e-19 | 93.2 |
MS.gene022995.t1 | AT5G42400 | 30.928 | 194 | 121 | 4 | 493 | 683 | 1192 | 1375 | 3.84e-19 | 93.2 |
MS.gene022995.t1 | AT5G42400 | 30.928 | 194 | 121 | 4 | 493 | 683 | 1192 | 1375 | 3.84e-19 | 93.2 |
MS.gene022995.t1 | AT5G42400 | 30.928 | 194 | 121 | 4 | 493 | 683 | 1192 | 1375 | 3.84e-19 | 93.2 |
MS.gene022995.t1 | AT5G42400 | 30.928 | 194 | 121 | 4 | 493 | 683 | 1192 | 1375 | 3.84e-19 | 93.2 |
MS.gene022995.t1 | AT5G42400 | 30.928 | 194 | 121 | 4 | 493 | 683 | 1192 | 1375 | 3.84e-19 | 93.2 |
MS.gene022995.t1 | AT1G76710 | 34.286 | 175 | 94 | 5 | 504 | 676 | 52 | 207 | 2.52e-18 | 89.4 |
MS.gene022995.t1 | AT1G76710 | 34.286 | 175 | 94 | 5 | 504 | 676 | 52 | 207 | 2.61e-18 | 89.4 |
MS.gene022995.t1 | AT1G76710 | 34.286 | 175 | 94 | 5 | 504 | 676 | 52 | 207 | 3.01e-18 | 89.0 |
MS.gene022995.t1 | AT1G76710 | 34.286 | 175 | 94 | 5 | 504 | 676 | 52 | 207 | 3.01e-18 | 89.0 |
MS.gene022995.t1 | AT4G30860 | 34.127 | 126 | 77 | 2 | 557 | 678 | 323 | 446 | 6.79e-18 | 87.8 |
MS.gene022995.t1 | AT2G31650 | 37.190 | 121 | 73 | 1 | 559 | 676 | 897 | 1017 | 8.13e-17 | 85.5 |
MS.gene022995.t1 | AT1G05830 | 36.364 | 121 | 74 | 1 | 559 | 676 | 918 | 1038 | 4.23e-16 | 83.2 |
MS.gene022995.t1 | AT1G05830 | 36.364 | 121 | 74 | 1 | 559 | 676 | 918 | 1038 | 4.23e-16 | 83.2 |
MS.gene022995.t1 | AT1G05830 | 36.364 | 121 | 74 | 1 | 559 | 676 | 918 | 1038 | 4.23e-16 | 83.2 |
MS.gene022995.t1 | AT1G05830 | 36.364 | 121 | 74 | 1 | 559 | 676 | 918 | 1038 | 4.23e-16 | 83.2 |
MS.gene022995.t1 | AT5G53430 | 32.836 | 134 | 88 | 2 | 549 | 680 | 890 | 1023 | 5.15e-16 | 82.8 |
MS.gene022995.t1 | AT4G27910 | 32.090 | 134 | 89 | 2 | 549 | 680 | 874 | 1007 | 1.42e-15 | 81.6 |
MS.gene022995.t1 | AT3G59960 | 33.884 | 121 | 78 | 2 | 560 | 678 | 111 | 231 | 1.11e-14 | 75.9 |
MS.gene022995.t1 | AT3G59960 | 33.884 | 121 | 78 | 2 | 560 | 678 | 111 | 231 | 1.11e-14 | 75.9 |
MS.gene022995.t1 | AT3G59960 | 33.884 | 121 | 78 | 2 | 560 | 678 | 111 | 231 | 1.11e-14 | 75.9 |
MS.gene022995.t1 | AT3G59960 | 33.884 | 121 | 78 | 2 | 560 | 678 | 111 | 231 | 1.55e-14 | 75.9 |
MS.gene022995.t1 | AT3G61740 | 33.613 | 119 | 76 | 2 | 561 | 676 | 840 | 958 | 7.72e-14 | 75.9 |
MS.gene022995.t1 | AT3G61740 | 33.613 | 119 | 76 | 2 | 561 | 676 | 876 | 994 | 1.07e-13 | 75.5 |
MS.gene022995.t1 | AT2G44150 | 32.258 | 124 | 82 | 2 | 557 | 678 | 113 | 236 | 7.46e-13 | 71.2 |
MS.gene022995.t1 | AT1G77300 | 36.364 | 110 | 66 | 2 | 571 | 677 | 1037 | 1145 | 2.81e-12 | 71.2 |
MS.gene022995.t1 | AT1G77300 | 36.364 | 110 | 66 | 2 | 571 | 677 | 1037 | 1145 | 2.92e-12 | 71.2 |
Find 126 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCACCTTCTGGTTGCCAAAT+TGG | 0.150159 | 7.2:-49125615 | None:intergenic |
GAATGTTCTTGTCTTCTTAA+AGG | 0.159465 | 7.2:+49130754 | MS.gene022995:CDS |
CTCCTTACAGAATATATTAA+TGG | 0.172721 | 7.2:-49125510 | None:intergenic |
TGAAAATATGAATCTTCTTT+TGG | 0.177238 | 7.2:+49131860 | MS.gene022995:CDS |
GGAGAAAGATATATGTTTAA+AGG | 0.212479 | 7.2:+49126499 | MS.gene022995:CDS |
AATGCGTTCCTTAGCAAATA+TGG | 0.253069 | 7.2:-49133808 | None:intergenic |
CTGTTTCCATCCGCTCCTTT+TGG | 0.259909 | 7.2:-49121727 | None:intergenic |
GTATCATTTAAGCATACTTC+TGG | 0.260944 | 7.2:+49122362 | MS.gene022995:CDS |
TTTCTATGATTACAATTATA+CGG | 0.269536 | 7.2:+49133848 | MS.gene022995:CDS |
CATACTTCCCTCTCACCTTC+TGG | 0.281824 | 7.2:-49125627 | None:intergenic |
AGGATGACATTTGAAGAATA+TGG | 0.282881 | 7.2:+49122946 | MS.gene022995:intron |
AATGGATCTATAGATGAAAA+TGG | 0.289635 | 7.2:+49128057 | MS.gene022995:CDS |
AGAGAAAATGCATCTAATTC+TGG | 0.297548 | 7.2:+49123508 | MS.gene022995:CDS |
CAAAGGTTTCCCACAAGGTT+TGG | 0.300398 | 7.2:+49122310 | MS.gene022995:CDS |
TGGATGGGGAGCCTTCTTAA+AGG | 0.310146 | 7.2:+49132013 | MS.gene022995:CDS |
TCATCAGAAGGTTCAACTTC+AGG | 0.314585 | 7.2:+49126314 | MS.gene022995:CDS |
CATCATGGATACACTTGTTT+AGG | 0.321050 | 7.2:+49122417 | MS.gene022995:CDS |
AGGTGTATAGTGAGGCTTAT+AGG | 0.324414 | 7.2:-49130701 | None:intergenic |
CCTTATCATCCACGTCAAAA+AGG | 0.325525 | 7.2:-49132647 | None:intergenic |
AACTACCTGTGGATAACAAT+TGG | 0.328568 | 7.2:-49133238 | None:intergenic |
AGTGATTTCCTTTGAATTAG+AGG | 0.339236 | 7.2:-49126393 | None:intergenic |
CTACCTCTCTTGGAGCTTGA+TGG | 0.343291 | 7.2:-49130586 | None:intergenic |
GACAACAGTGTCAAGATATA+AGG | 0.347512 | 7.2:+49122238 | MS.gene022995:CDS |
GAGAAAGATATATGTTTAAA+GGG | 0.348869 | 7.2:+49126500 | MS.gene022995:CDS |
AGAGGGAAAAGCAACCAATT+TGG | 0.356361 | 7.2:+49125601 | MS.gene022995:intron |
AAAGGTTTCCCACAAGGTTT+GGG | 0.358435 | 7.2:+49122311 | MS.gene022995:CDS |
AATATTGTTCGAAGCTATAT+TGG | 0.363346 | 7.2:+49122988 | MS.gene022995:CDS |
CAACAATCTTTACACACATC+TGG | 0.368941 | 7.2:-49131027 | None:intergenic |
TTAAAGGGAATAGAGATGTT+TGG | 0.368970 | 7.2:+49126515 | MS.gene022995:CDS |
TGGAGATCATTGTTACCTTA+AGG | 0.384564 | 7.2:+49125650 | MS.gene022995:CDS |
ATATGTCGGAACTTACTTGC+TGG | 0.385879 | 7.2:+49127985 | MS.gene022995:CDS |
GTATAGGGTATGTTTGTTGC+TGG | 0.388339 | 7.2:+49133771 | MS.gene022995:intron |
ATTGTTTGAATTTCATTATC+CGG | 0.389689 | 7.2:-49126344 | None:intergenic |
AAACCTTTGTATGTCTCTAA+TGG | 0.393901 | 7.2:-49122296 | None:intergenic |
TTCAAGACGTGCATGGAAAT+AGG | 0.396142 | 7.2:+49128009 | MS.gene022995:CDS |
TTAGCAAGGTCTGATGTTGC+TGG | 0.397541 | 7.2:+49131993 | MS.gene022995:CDS |
ATCTAATTCTGGCCTATGTT+TGG | 0.405339 | 7.2:+49123519 | MS.gene022995:CDS |
TCCAAGAGAGGTAGGAGAAA+AGG | 0.416552 | 7.2:+49130595 | MS.gene022995:CDS |
ATTTCATGGACAGGAACAAC+AGG | 0.425535 | 7.2:+49121640 | MS.gene022995:intron |
ATCTTGTTCATCAAGATTTG+AGG | 0.430475 | 7.2:-49121683 | None:intergenic |
GGTGTATAGTGAGGCTTATA+GGG | 0.433959 | 7.2:-49130700 | None:intergenic |
CATCAGAAGGTTCAACTTCA+GGG | 0.434183 | 7.2:+49126315 | MS.gene022995:CDS |
TGACCATCTCCACGAGGAAC+TGG | 0.434927 | 7.2:-49131834 | None:intergenic |
AGTCTCGAGGCATCCGATCT+TGG | 0.440108 | 7.2:+49130647 | MS.gene022995:CDS |
ATGGTGAAGACGAACTTCTA+TGG | 0.443474 | 7.2:+49122679 | MS.gene022995:CDS |
TTCTTTGTTCTCTTCTTCAT+CGG | 0.444133 | 7.2:-49122637 | None:intergenic |
TATCACAGAATGGAAACCTT+TGG | 0.447819 | 7.2:+49126478 | MS.gene022995:CDS |
ATCTTGCCCTTCCATTGAGT+TGG | 0.448245 | 7.2:-49126441 | None:intergenic |
AACAATATTCAACACTTCAT+CGG | 0.465426 | 7.2:-49122974 | None:intergenic |
CAGATGTGTGTAAAGATTGT+TGG | 0.468719 | 7.2:+49131028 | MS.gene022995:CDS |
ACTACCTGTGGATAACAATT+GGG | 0.469710 | 7.2:-49133237 | None:intergenic |
CCAAGAGAGGTAGGAGAAAA+GGG | 0.469723 | 7.2:+49130596 | MS.gene022995:CDS |
GATGCGTTTATCCAACTCAA+TGG | 0.488340 | 7.2:+49126430 | MS.gene022995:CDS |
ATTTATTTCCCAAACCTTGT+GGG | 0.492257 | 7.2:-49122319 | None:intergenic |
CATTTATTTCCCAAACCTTG+TGG | 0.501091 | 7.2:-49122320 | None:intergenic |
GCTAAGGAACGCATTGAAGC+TGG | 0.501599 | 7.2:+49133816 | MS.gene022995:CDS |
AAACATCTTAACCTTTAAGA+AGG | 0.506218 | 7.2:-49132024 | None:intergenic |
GTGATTTCCTTTGAATTAGA+GGG | 0.513594 | 7.2:-49126392 | None:intergenic |
AAACATATATCTTTCTCCAA+AGG | 0.515068 | 7.2:-49126494 | None:intergenic |
TGGAGCTTGATGGCACCTCA+TGG | 0.515829 | 7.2:-49130576 | None:intergenic |
AGATACCTCATTATACATCA+TGG | 0.526029 | 7.2:+49122402 | MS.gene022995:CDS |
GGGCCAGTTCCTCGTGGAGA+TGG | 0.526534 | 7.2:+49131831 | MS.gene022995:CDS |
AAGGTCTGATGTTGCTGGAT+GGG | 0.527692 | 7.2:+49131998 | MS.gene022995:CDS |
ATGCATGAAGAGATGCCAAA+TGG | 0.528944 | 7.2:+49128039 | MS.gene022995:CDS |
TGTGGTGATGATACGTTTGA+AGG | 0.529298 | 7.2:+49131810 | MS.gene022995:CDS |
AACAATTGGGTTCTGATGAG+TGG | 0.532051 | 7.2:-49133224 | None:intergenic |
AGATGTGTGTAAAGATTGTT+GGG | 0.536713 | 7.2:+49131029 | MS.gene022995:CDS |
TTTGGATAAAAGTTTGAGTG+AGG | 0.537637 | 7.2:+49123537 | MS.gene022995:CDS |
GAAGGTGAGAGGGAAGTATG+TGG | 0.544057 | 7.2:+49125630 | MS.gene022995:CDS |
GTTAAAAGAAAAGATCCAAA+AGG | 0.545062 | 7.2:+49121712 | MS.gene022995:CDS |
TGACACTGTTGTCATGACCT+TGG | 0.545294 | 7.2:-49122228 | None:intergenic |
AGGTCTGATGTTGCTGGATG+GGG | 0.550995 | 7.2:+49131999 | MS.gene022995:CDS |
AGGGACCACTGCAGAAATTG+AGG | 0.552212 | 7.2:+49123011 | MS.gene022995:CDS |
AACAATCTTTACACACATCT+GGG | 0.552907 | 7.2:-49131026 | None:intergenic |
ATCTTTGATTGTCCTCTGCA+CGG | 0.553369 | 7.2:+49125477 | MS.gene022995:CDS |
CGTTTATCCAACTCAATGGA+AGG | 0.558111 | 7.2:+49126434 | MS.gene022995:CDS |
CATCAAGCTCCAAGAGAGGT+AGG | 0.559332 | 7.2:+49130587 | MS.gene022995:CDS |
AAAGAATCTACAAATTCTCA+TGG | 0.561243 | 7.2:+49133927 | MS.gene022995:CDS |
TGCTGGCTTCAAGACGTGCA+TGG | 0.563883 | 7.2:+49128002 | MS.gene022995:CDS |
CAAGGTCTGATGTTGCTGGA+TGG | 0.567604 | 7.2:+49131997 | MS.gene022995:CDS |
GGATAATGAAATTCAAACAA+TGG | 0.569073 | 7.2:+49126346 | MS.gene022995:CDS |
AAAGATCCAAAAGGAGCGGA+TGG | 0.569833 | 7.2:+49121721 | MS.gene022995:CDS |
TCTCCAATGTGAACTTTCCA+AGG | 0.573777 | 7.2:+49122211 | MS.gene022995:CDS |
TGATGTATAATATCACAGAA+TGG | 0.574561 | 7.2:+49126468 | MS.gene022995:CDS |
AGAACCCAATTGTTATCCAC+AGG | 0.576141 | 7.2:+49133233 | MS.gene022995:CDS |
ATTGACACCCTCTAATTCAA+AGG | 0.576655 | 7.2:+49126385 | MS.gene022995:CDS |
TTGTTCGAAGCTATATTGGA+GGG | 0.577056 | 7.2:+49122992 | MS.gene022995:CDS |
ATTGTTCGAAGCTATATTGG+AGG | 0.581710 | 7.2:+49122991 | MS.gene022995:CDS |
TGTATCCATGATGTATAATG+AGG | 0.582754 | 7.2:-49122407 | None:intergenic |
TCGTGTAGCCATATTTGCTA+AGG | 0.583432 | 7.2:+49133800 | MS.gene022995:CDS |
TTGTATCGATGCTTATCGCA+AGG | 0.584308 | 7.2:+49133179 | MS.gene022995:CDS |
TCTACAAATTCTCATGGCAA+AGG | 0.584690 | 7.2:+49133933 | MS.gene022995:CDS |
TATGCAGTTGTCTTATATGT+CGG | 0.585978 | 7.2:+49127971 | MS.gene022995:intron |
GATGTCAATATCTCATCAGA+AGG | 0.588941 | 7.2:+49126302 | MS.gene022995:CDS |
CAATGCAGACATCGATTCAG+AGG | 0.599779 | 7.2:+49130934 | MS.gene022995:CDS |
TGGACAGGAACAACAGGGAG+AGG | 0.603618 | 7.2:+49121646 | MS.gene022995:intron |
ATATATTACGATCAACATGC+AGG | 0.606040 | 7.2:+49122591 | MS.gene022995:CDS |
AAAATCAAAGAGCACCCTCA+TGG | 0.608079 | 7.2:+49133871 | MS.gene022995:CDS |
TGTGTAAAGATTGTTGGGCC+AGG | 0.608263 | 7.2:+49131034 | MS.gene022995:CDS |
ACATACAAAGGTTTCCCACA+AGG | 0.608598 | 7.2:+49122305 | MS.gene022995:CDS |
TTTGGCAACCAGAAGGTGAG+AGG | 0.613167 | 7.2:+49125619 | MS.gene022995:CDS |
CAACCAATTTGGCAACCAGA+AGG | 0.613641 | 7.2:+49125612 | MS.gene022995:CDS |
CTTTGTATGTCTCTAATGGA+TGG | 0.618170 | 7.2:-49122292 | None:intergenic |
ATACATTATGAACAACATGA+AGG | 0.620251 | 7.2:-49122343 | None:intergenic |
CTTGTTGTGAGAAATACTGC+GGG | 0.625135 | 7.2:+49130779 | MS.gene022995:CDS |
GGAACGCATTGAAGCTGGTG+AGG | 0.629930 | 7.2:+49133821 | MS.gene022995:CDS |
CACATTCCTTGACACTCACA+AGG | 0.630215 | 7.2:-49130721 | None:intergenic |
TTGGCAACCAGAAGGTGAGA+GGG | 0.633976 | 7.2:+49125620 | MS.gene022995:CDS |
AAGAAAAGATCCAAAAGGAG+CGG | 0.641722 | 7.2:+49121717 | MS.gene022995:CDS |
GTGCCATCAAGCTCCAAGAG+AGG | 0.643581 | 7.2:+49130583 | MS.gene022995:CDS |
TGACCTTGGAAAGTTCACAT+TGG | 0.643642 | 7.2:-49122214 | None:intergenic |
ATTGGCTTCAAGAAACCATG+AGG | 0.645862 | 7.2:-49133886 | None:intergenic |
GGTTGAGAACATCCGTGCAG+AGG | 0.648329 | 7.2:-49125489 | None:intergenic |
GTTTATCCAACTCAATGGAA+GGG | 0.649922 | 7.2:+49126435 | MS.gene022995:CDS |
TGTATCGATGCTTATCGCAA+GGG | 0.651098 | 7.2:+49133180 | MS.gene022995:CDS |
GTGGTGATGATACGTTTGAA+GGG | 0.651606 | 7.2:+49131811 | MS.gene022995:CDS |
TATACACCTTGTGAGTGTCA+AGG | 0.655572 | 7.2:+49130715 | MS.gene022995:CDS |
CACTCACAAGGTGTATAGTG+AGG | 0.661649 | 7.2:-49130709 | None:intergenic |
CACAAAGAAGCAGAAAAGCG+TGG | 0.662495 | 7.2:+49132594 | MS.gene022995:CDS |
CATCCATTAGAGACATACAA+AGG | 0.663649 | 7.2:+49122293 | MS.gene022995:CDS |
TTGGCTTCAAGAAACCATGA+GGG | 0.673115 | 7.2:-49133885 | None:intergenic |
TTTGAAGGGCCAGTTCCTCG+TGG | 0.677096 | 7.2:+49131825 | MS.gene022995:CDS |
TTTCATGGACAGGAACAACA+GGG | 0.680957 | 7.2:+49121641 | MS.gene022995:intron |
TCTTGTTGTGAGAAATACTG+CGG | 0.680957 | 7.2:+49130778 | MS.gene022995:CDS |
TCACATTGACCATCTCCACG+AGG | 0.735800 | 7.2:-49131840 | None:intergenic |
GAGTATTTAGGAGAGTACAC+AGG | 0.736960 | 7.2:+49132558 | MS.gene022995:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 49120792 | 49133971 | 49120792 | ID=MS.gene022995 |
chr7.2 | mRNA | 49120792 | 49133971 | 49120792 | ID=MS.gene022995.t1;Parent=MS.gene022995 |
chr7.2 | exon | 49120792 | 49120794 | 49120792 | ID=MS.gene022995.t1.exon1;Parent=MS.gene022995.t1 |
chr7.2 | CDS | 49120792 | 49120794 | 49120792 | ID=cds.MS.gene022995.t1;Parent=MS.gene022995.t1 |
chr7.2 | exon | 49121653 | 49121754 | 49121653 | ID=MS.gene022995.t1.exon2;Parent=MS.gene022995.t1 |
chr7.2 | CDS | 49121653 | 49121754 | 49121653 | ID=cds.MS.gene022995.t1;Parent=MS.gene022995.t1 |
chr7.2 | exon | 49122185 | 49122438 | 49122185 | ID=MS.gene022995.t1.exon3;Parent=MS.gene022995.t1 |
chr7.2 | CDS | 49122185 | 49122438 | 49122185 | ID=cds.MS.gene022995.t1;Parent=MS.gene022995.t1 |
chr7.2 | exon | 49122545 | 49122700 | 49122545 | ID=MS.gene022995.t1.exon4;Parent=MS.gene022995.t1 |
chr7.2 | CDS | 49122545 | 49122700 | 49122545 | ID=cds.MS.gene022995.t1;Parent=MS.gene022995.t1 |
chr7.2 | exon | 49122948 | 49123032 | 49122948 | ID=MS.gene022995.t1.exon5;Parent=MS.gene022995.t1 |
chr7.2 | CDS | 49122948 | 49123032 | 49122948 | ID=cds.MS.gene022995.t1;Parent=MS.gene022995.t1 |
chr7.2 | exon | 49123460 | 49123600 | 49123460 | ID=MS.gene022995.t1.exon6;Parent=MS.gene022995.t1 |
chr7.2 | CDS | 49123460 | 49123600 | 49123460 | ID=cds.MS.gene022995.t1;Parent=MS.gene022995.t1 |
chr7.2 | exon | 49125477 | 49125524 | 49125477 | ID=MS.gene022995.t1.exon7;Parent=MS.gene022995.t1 |
chr7.2 | CDS | 49125477 | 49125524 | 49125477 | ID=cds.MS.gene022995.t1;Parent=MS.gene022995.t1 |
chr7.2 | exon | 49125603 | 49125671 | 49125603 | ID=MS.gene022995.t1.exon8;Parent=MS.gene022995.t1 |
chr7.2 | CDS | 49125603 | 49125671 | 49125603 | ID=cds.MS.gene022995.t1;Parent=MS.gene022995.t1 |
chr7.2 | exon | 49126296 | 49126546 | 49126296 | ID=MS.gene022995.t1.exon9;Parent=MS.gene022995.t1 |
chr7.2 | CDS | 49126296 | 49126546 | 49126296 | ID=cds.MS.gene022995.t1;Parent=MS.gene022995.t1 |
chr7.2 | exon | 49127978 | 49128101 | 49127978 | ID=MS.gene022995.t1.exon10;Parent=MS.gene022995.t1 |
chr7.2 | CDS | 49127978 | 49128101 | 49127978 | ID=cds.MS.gene022995.t1;Parent=MS.gene022995.t1 |
chr7.2 | exon | 49130574 | 49130800 | 49130574 | ID=MS.gene022995.t1.exon11;Parent=MS.gene022995.t1 |
chr7.2 | CDS | 49130574 | 49130800 | 49130574 | ID=cds.MS.gene022995.t1;Parent=MS.gene022995.t1 |
chr7.2 | exon | 49130924 | 49131055 | 49130924 | ID=MS.gene022995.t1.exon12;Parent=MS.gene022995.t1 |
chr7.2 | CDS | 49130924 | 49131055 | 49130924 | ID=cds.MS.gene022995.t1;Parent=MS.gene022995.t1 |
chr7.2 | exon | 49131809 | 49131899 | 49131809 | ID=MS.gene022995.t1.exon13;Parent=MS.gene022995.t1 |
chr7.2 | CDS | 49131809 | 49131899 | 49131809 | ID=cds.MS.gene022995.t1;Parent=MS.gene022995.t1 |
chr7.2 | exon | 49131987 | 49132034 | 49131987 | ID=MS.gene022995.t1.exon14;Parent=MS.gene022995.t1 |
chr7.2 | CDS | 49131987 | 49132034 | 49131987 | ID=cds.MS.gene022995.t1;Parent=MS.gene022995.t1 |
chr7.2 | exon | 49132540 | 49132668 | 49132540 | ID=MS.gene022995.t1.exon15;Parent=MS.gene022995.t1 |
chr7.2 | CDS | 49132540 | 49132668 | 49132540 | ID=cds.MS.gene022995.t1;Parent=MS.gene022995.t1 |
chr7.2 | exon | 49133177 | 49133254 | 49133177 | ID=MS.gene022995.t1.exon16;Parent=MS.gene022995.t1 |
chr7.2 | CDS | 49133177 | 49133254 | 49133177 | ID=cds.MS.gene022995.t1;Parent=MS.gene022995.t1 |
chr7.2 | exon | 49133777 | 49133971 | 49133777 | ID=MS.gene022995.t1.exon17;Parent=MS.gene022995.t1 |
chr7.2 | CDS | 49133777 | 49133971 | 49133777 | ID=cds.MS.gene022995.t1;Parent=MS.gene022995.t1 |
Gene Sequence |
Protein sequence |