AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene023126

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene023126.t1 MTR_4g094588 98.282 291 5 0 1 291 48 338 0.0 596
MS.gene023126.t1 MTR_5g091390 45.614 285 137 8 2 284 36 304 2.79e-50 168
MS.gene023126.t1 MTR_5g043880 51.852 189 76 5 107 291 100 277 1.97e-48 162
MS.gene023126.t1 MTR_1g086790 74.227 97 25 0 107 203 134 230 2.18e-47 161
MS.gene023126.t1 MTR_7g109800 49.189 185 74 6 107 284 121 292 2.63e-44 152
MS.gene023126.t1 MTR_2g033820 68.817 93 29 0 114 206 186 278 7.17e-42 148
MS.gene023126.t1 MTR_8g007270 62.921 89 33 0 99 187 122 210 6.20e-34 123
MS.gene023126.t1 MTR_5g042920 45.098 153 71 3 71 213 259 408 6.78e-34 128
MS.gene023126.t1 MTR_5g042920 60.000 60 23 1 131 190 151 209 7.35e-17 80.5
MS.gene023126.t1 MTR_7g079010 48.227 141 65 3 49 189 67 199 6.56e-33 120
MS.gene023126.t1 MTR_3g095080 47.518 141 67 2 49 187 89 224 2.67e-32 120
MS.gene023126.t1 MTR_3g095080 47.518 141 67 2 49 187 65 200 3.12e-32 119
MS.gene023126.t1 MTR_4g122530 43.182 176 73 5 118 291 195 345 4.39e-32 123
MS.gene023126.t1 MTR_3g104750 64.198 81 28 1 109 188 81 161 9.81e-32 116
MS.gene023126.t1 MTR_3g056100 55.140 107 47 1 98 204 225 330 6.15e-31 120
MS.gene023126.t1 MTR_3g056100 48.101 79 35 2 131 209 99 171 6.65e-16 77.8
MS.gene023126.t1 MTR_3g056100 55.140 107 47 1 98 204 238 343 6.67e-31 120
MS.gene023126.t1 MTR_3g056100 48.101 79 35 2 131 209 99 171 5.76e-16 78.2
MS.gene023126.t1 MTR_4g082580 45.255 137 69 1 56 192 209 339 8.34e-31 119
MS.gene023126.t1 MTR_4g082580 50.769 65 30 1 131 193 145 209 2.72e-14 72.8
MS.gene023126.t1 MTR_8g092140 68.919 74 22 1 115 187 143 216 1.20e-30 115
MS.gene023126.t1 MTR_3g056100 55.140 107 47 1 98 204 369 474 1.35e-30 120
MS.gene023126.t1 MTR_3g056100 48.101 79 35 2 131 209 243 315 8.53e-16 77.8
MS.gene023126.t1 MTR_3g056100 55.140 107 47 1 98 204 382 487 1.40e-30 120
MS.gene023126.t1 MTR_3g056100 48.101 79 35 2 131 209 243 315 7.37e-16 77.8
MS.gene023126.t1 MTR_8g092010 49.107 112 50 2 83 190 59 167 1.64e-30 113
MS.gene023126.t1 MTR_3g095040 47.619 105 42 1 117 221 104 195 3.66e-30 113
MS.gene023126.t1 MTR_1g015140 63.636 77 28 0 112 188 83 159 7.52e-30 111
MS.gene023126.t1 MTR_5g094430 60.494 81 32 0 112 192 211 291 7.72e-30 117
MS.gene023126.t1 MTR_5g094430 59.322 59 23 1 132 190 67 124 7.54e-16 77.4
MS.gene023126.t1 MTR_7g011820 46.094 128 61 1 65 192 352 471 8.65e-30 118
MS.gene023126.t1 MTR_7g011820 47.872 94 33 2 116 194 198 290 1.24e-16 80.1
MS.gene023126.t1 MTR_5g094430 60.494 81 32 0 112 192 233 313 9.91e-30 117
MS.gene023126.t1 MTR_5g094430 59.322 59 23 1 132 190 89 146 7.00e-16 77.8
MS.gene023126.t1 MTR_7g028415 66.197 71 24 0 119 189 81 151 1.02e-29 110
MS.gene023126.t1 MTR_7g028710 66.197 71 24 0 119 189 81 151 1.02e-29 110
MS.gene023126.t1 MTR_4g013260 62.195 82 31 0 109 190 314 395 1.13e-29 117
MS.gene023126.t1 MTR_4g013260 52.632 76 34 1 131 204 184 259 5.38e-19 87.0
MS.gene023126.t1 MTR_5g094430 60.494 81 32 0 112 192 345 425 2.01e-29 117
MS.gene023126.t1 MTR_5g094430 59.322 59 23 1 132 190 201 258 8.85e-16 77.8
MS.gene023126.t1 MTR_3g009470 64.103 78 28 0 115 192 479 556 2.96e-29 117
MS.gene023126.t1 MTR_3g009470 64.062 64 22 1 131 194 280 342 1.93e-19 88.6
MS.gene023126.t1 MTR_5g074400 42.568 148 71 2 51 198 353 486 5.69e-29 116
MS.gene023126.t1 MTR_5g074400 61.667 60 22 1 131 190 243 301 2.21e-16 79.3
MS.gene023126.t1 MTR_1g077780 53.659 82 38 0 112 193 43 124 8.08e-29 107
MS.gene023126.t1 MTR_7g071120 37.433 187 95 5 43 212 223 404 1.59e-28 114
MS.gene023126.t1 MTR_7g071120 56.522 69 29 1 126 194 161 228 2.77e-17 82.0
MS.gene023126.t1 MTR_3g031220 57.317 82 35 0 110 191 344 425 6.67e-27 109
MS.gene023126.t1 MTR_3g031220 40.179 112 61 3 114 224 185 291 1.12e-16 80.1
MS.gene023126.t1 MTR_7g080020 56.098 82 36 0 115 196 477 558 1.04e-26 110
MS.gene023126.t1 MTR_7g080020 54.762 84 33 2 111 194 264 342 1.37e-18 86.3
MS.gene023126.t1 MTR_8g096730 50.588 85 42 0 108 192 47 131 1.95e-26 101
MS.gene023126.t1 MTR_3g053330 34.359 195 105 5 105 289 225 406 4.01e-26 107
MS.gene023126.t1 MTR_7g100510 41.912 136 65 2 57 190 297 420 4.48e-26 107
MS.gene023126.t1 MTR_7g100510 55.882 68 29 1 132 199 190 256 7.69e-17 80.5
MS.gene023126.t1 MTR_7g080000 56.410 78 34 0 115 192 416 493 9.09e-26 107
MS.gene023126.t1 MTR_7g080000 51.190 84 36 2 111 194 218 296 3.23e-17 82.0
MS.gene023126.t1 MTR_7g062220 71.930 57 16 0 131 187 124 180 1.08e-23 98.6
MS.gene023126.t1 MTR_5g097490 48.598 107 53 1 99 203 220 326 1.73e-23 99.4
MS.gene023126.t1 MTR_5g097490 51.515 66 23 2 131 192 92 152 5.91e-13 68.9
MS.gene023126.t1 MTR_2g023930 45.652 92 49 1 100 190 274 365 1.75e-23 100
MS.gene023126.t1 MTR_7g110720 43.363 113 60 3 81 190 138 249 2.68e-23 99.0
MS.gene023126.t1 MTR_4g132430 44.565 92 50 1 100 190 96 187 3.16e-23 98.2
MS.gene023126.t1 MTR_7g110720 53.247 77 35 1 115 190 200 276 1.08e-22 97.4
MS.gene023126.t1 MTR_4g132430 44.565 92 50 1 100 190 230 321 1.17e-22 97.8
MS.gene023126.t1 MTR_2g105060 51.220 82 37 2 113 191 74 155 1.28e-22 94.4
MS.gene023126.t1 MTR_2g105060 51.220 82 37 2 113 191 149 230 2.11e-22 95.1
MS.gene023126.t1 MTR_1g009613 41.667 96 55 1 107 201 238 333 2.92e-22 95.1
MS.gene023126.t1 MTR_6g086555 41.129 124 49 4 117 217 192 314 3.14e-22 95.9
MS.gene023126.t1 MTR_2g045360 36.641 131 73 3 102 225 182 309 1.57e-21 94.0
MS.gene023126.t1 MTR_4g130900 42.991 107 59 1 91 195 319 425 2.51e-21 94.0
MS.gene023126.t1 MTR_2g088000 46.429 84 44 1 108 190 326 409 2.70e-21 94.0
MS.gene023126.t1 MTR_4g049760 39.837 123 72 2 91 211 250 372 6.98e-21 92.8
MS.gene023126.t1 MTR_7g009730 43.478 115 56 3 91 200 175 285 8.82e-21 92.4
MS.gene023126.t1 MTR_4g094412 47.436 78 40 1 115 191 218 295 1.68e-20 91.3
MS.gene023126.t1 MTR_4g094412 47.436 78 40 1 115 191 227 304 1.91e-20 91.3
MS.gene023126.t1 MTR_8g098945 50.617 81 38 2 130 209 128 207 2.19e-20 89.0
MS.gene023126.t1 MTR_5g016610 41.053 95 55 1 94 187 162 256 2.49e-20 88.6
MS.gene023126.t1 MTR_7g109600 60.317 63 24 1 132 193 54 116 4.86e-20 87.8
MS.gene023126.t1 MTR_4g107970 44.186 86 47 1 106 190 153 238 7.18e-20 89.7
MS.gene023126.t1 MTR_4g049790 37.500 128 77 2 98 224 281 406 7.49e-20 89.7
MS.gene023126.t1 MTR_4g107970 48.052 77 39 1 115 190 239 315 7.86e-20 89.7
MS.gene023126.t1 MTR_2g032030 43.878 98 52 2 97 191 231 328 1.21e-19 88.6
MS.gene023126.t1 MTR_2g032030 43.878 98 52 2 97 191 231 328 1.53e-19 88.6
MS.gene023126.t1 MTR_1g013760 57.895 57 23 1 132 187 141 197 2.40e-19 86.3
MS.gene023126.t1 MTR_3g009470 64.062 64 22 1 131 194 280 342 2.46e-19 88.2
MS.gene023126.t1 MTR_2g016770 56.667 60 25 1 132 190 36 95 2.76e-19 84.7
MS.gene023126.t1 MTR_7g079040 59.016 61 24 1 132 191 155 215 2.90e-19 86.7
MS.gene023126.t1 MTR_2g016770 56.667 60 25 1 132 190 28 87 3.79e-19 84.0
MS.gene023126.t1 MTR_8g087000 58.065 62 25 1 132 192 78 139 5.01e-19 84.3
MS.gene023126.t1 MTR_8g028565 57.377 61 25 1 132 191 156 216 5.33e-19 85.9
MS.gene023126.t1 MTR_8g087000 58.065 62 25 1 132 192 77 138 5.91e-19 84.3
MS.gene023126.t1 MTR_4g127040 39.560 91 54 1 98 187 212 302 1.37e-18 84.3
MS.gene023126.t1 MTR_4g007060 51.613 62 29 1 130 190 127 188 1.56e-18 84.0
MS.gene023126.t1 MTR_4g007060 51.613 62 29 1 130 190 161 222 2.04e-18 84.0
MS.gene023126.t1 MTR_3g106060 54.237 59 26 1 130 187 137 195 3.96e-18 82.8
MS.gene023126.t1 MTR_3g108960 32.500 160 95 4 29 187 224 371 5.31e-18 83.6
MS.gene023126.t1 MTR_1g070455 54.839 62 26 2 132 191 294 355 1.14e-17 82.4
MS.gene023126.t1 MTR_2g083870 56.667 60 25 1 132 190 81 140 1.23e-17 80.9
MS.gene023126.t1 MTR_1g078260 47.887 71 36 1 118 187 234 304 1.63e-17 82.8
MS.gene023126.t1 MTR_3g031220 40.179 112 61 3 114 224 185 291 6.82e-17 80.5
MS.gene023126.t1 MTR_2g024350 52.239 67 30 2 128 192 4 70 7.90e-17 78.2
MS.gene023126.t1 MTR_4g094908 40.244 82 48 1 107 187 242 323 7.93e-17 79.7
MS.gene023126.t1 MTR_1g099600 46.341 82 42 2 112 191 165 246 1.80e-16 78.6
MS.gene023126.t1 MTR_2g024380 43.902 82 44 2 112 191 231 312 2.36e-16 79.3
MS.gene023126.t1 MTR_8g099350 43.000 100 44 3 107 198 103 197 2.52e-16 78.6
MS.gene023126.t1 MTR_5g097500 48.684 76 39 0 116 191 215 290 2.71e-16 77.8
MS.gene023126.t1 MTR_1g013790 38.947 95 48 3 130 223 100 185 2.84e-16 77.0
MS.gene023126.t1 MTR_5g029850 82.500 40 7 0 109 148 29 68 2.94e-16 72.4
MS.gene023126.t1 MTR_4g047580 37.391 115 67 3 81 194 235 345 3.13e-16 79.0
MS.gene023126.t1 MTR_0117s0040 45.070 71 38 1 118 187 61 131 1.02e-15 75.5
MS.gene023126.t1 MTR_2g075610 45.455 77 37 2 130 203 28 102 7.26e-15 72.0
MS.gene023126.t1 MTR_8g067650 38.000 100 60 2 102 199 309 408 1.08e-14 74.3
MS.gene023126.t1 MTR_5g067680 35.971 139 82 3 50 185 125 259 1.20e-14 73.6
MS.gene023126.t1 MTR_8g069935 39.785 93 54 2 100 190 299 391 1.65e-14 73.6
MS.gene023126.t1 MTR_8g067635 37.624 101 61 2 100 198 317 417 2.26e-14 73.6
MS.gene023126.t1 MTR_2g075750 43.038 79 40 2 130 205 27 103 2.88e-14 70.1
MS.gene023126.t1 MTR_3g090860 46.377 69 34 1 130 195 132 200 2.96e-14 72.4
MS.gene023126.t1 MTR_5g074200 44.186 86 44 3 124 206 211 295 1.32e-13 70.5
MS.gene023126.t1 MTR_8g027860 33.562 146 71 5 130 262 135 267 2.01e-13 70.1
MS.gene023126.t1 MTR_7g117200 41.758 91 47 3 100 185 86 175 3.96e-13 68.9
MS.gene023126.t1 MTR_6g053200 40.000 75 44 1 131 204 330 404 4.83e-13 69.3
MS.gene023126.t1 MTR_7g073430 40.625 96 50 3 96 185 85 179 5.19e-13 68.2
MS.gene023126.t1 MTR_7g073380 31.343 134 83 4 90 220 83 210 8.00e-13 67.8
MS.gene023126.t1 MTR_8g005750 41.000 100 49 4 91 185 66 160 9.61e-13 67.4
MS.gene023126.t1 MTR_2g075680 35.772 123 60 3 66 185 99 205 1.31e-12 67.4
MS.gene023126.t1 MTR_3g095080 38.318 107 59 2 49 153 89 190 1.35e-12 65.5
MS.gene023126.t1 MTR_2g075700 43.333 90 45 2 99 185 115 201 1.44e-12 67.4
MS.gene023126.t1 MTR_8g032510 40.000 90 45 3 131 211 119 208 2.46e-12 66.2
MS.gene023126.t1 MTR_8g092010 41.772 79 39 2 83 157 59 134 4.33e-12 62.8
MS.gene023126.t1 MTR_5g067700 39.080 87 48 3 130 212 105 190 5.03e-12 64.7
MS.gene023126.t1 MTR_3g093830 32.414 145 90 4 44 185 45 184 9.28e-12 64.7
MS.gene023126.t1 MTR_5g044695 41.379 58 34 0 100 157 46 103 4.05e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene023126.t1 AT4G18170 49.653 288 120 10 2 285 48 314 1.28e-65 208
MS.gene023126.t1 AT1G29860 54.706 170 65 3 115 284 120 277 2.38e-55 181
MS.gene023126.t1 AT5G46350 45.848 277 109 10 26 285 70 322 5.68e-53 176
MS.gene023126.t1 AT1G69310 47.312 186 72 3 106 286 122 286 1.17e-45 155
MS.gene023126.t1 AT1G69310 47.312 186 72 3 106 286 122 286 1.17e-45 155
MS.gene023126.t1 AT1G69310 47.312 186 72 3 106 286 122 286 1.17e-45 155
MS.gene023126.t1 AT2G47260 75.000 88 22 0 107 194 150 237 3.36e-43 150
MS.gene023126.t1 AT5G49520 57.851 121 51 0 115 235 205 325 8.31e-43 151
MS.gene023126.t1 AT1G69310 45.161 186 72 4 106 286 122 282 5.17e-40 141
MS.gene023126.t1 AT3G62340 58.763 97 38 1 109 205 96 190 3.31e-35 128
MS.gene023126.t1 AT4G39410 67.857 84 27 0 104 187 196 279 4.34e-35 129
MS.gene023126.t1 AT2G44745 63.441 93 33 1 95 187 110 201 1.67e-34 125
MS.gene023126.t1 AT2G46130 65.823 79 27 0 111 189 10 88 1.19e-32 116
MS.gene023126.t1 AT5G07100 53.535 99 46 0 103 201 113 211 1.38e-32 120
MS.gene023126.t1 AT5G07100 46.479 71 38 0 131 201 24 94 8.68e-15 72.4
MS.gene023126.t1 AT5G07100 53.535 99 46 0 103 201 113 211 1.38e-32 120
MS.gene023126.t1 AT5G07100 46.479 71 38 0 131 201 24 94 8.68e-15 72.4
MS.gene023126.t1 AT5G07100 53.535 99 46 0 103 201 113 211 1.38e-32 120
MS.gene023126.t1 AT5G07100 46.479 71 38 0 131 201 24 94 8.68e-15 72.4
MS.gene023126.t1 AT5G07100 53.535 99 46 0 103 201 113 211 1.38e-32 120
MS.gene023126.t1 AT5G07100 46.479 71 38 0 131 201 24 94 8.68e-15 72.4
MS.gene023126.t1 AT5G07100 45.185 135 62 1 67 201 182 304 2.67e-32 121
MS.gene023126.t1 AT5G07100 46.479 71 38 0 131 201 117 187 1.55e-14 72.8
MS.gene023126.t1 AT2G03340 42.759 145 74 2 57 192 332 476 1.09e-31 123
MS.gene023126.t1 AT2G03340 60.606 66 24 2 131 196 250 313 9.73e-18 83.6
MS.gene023126.t1 AT1G64000 58.824 85 35 0 105 189 88 172 3.08e-31 115
MS.gene023126.t1 AT1G13960 45.522 134 69 1 57 190 339 468 1.18e-30 120
MS.gene023126.t1 AT1G13960 59.701 67 25 2 131 196 229 294 2.58e-17 82.0
MS.gene023126.t1 AT1G13960 45.522 134 69 1 57 190 186 315 1.24e-30 118
MS.gene023126.t1 AT1G13960 59.701 67 25 2 131 196 76 141 4.37e-17 80.9
MS.gene023126.t1 AT5G41570 60.494 81 32 0 109 189 76 156 1.41e-30 113
MS.gene023126.t1 AT5G26170 65.714 70 24 0 118 187 100 169 3.25e-30 112
MS.gene023126.t1 AT4G26640 62.963 81 30 0 112 192 186 266 7.70e-30 116
MS.gene023126.t1 AT4G26640 54.286 70 31 1 131 200 35 103 5.87e-17 80.5
MS.gene023126.t1 AT4G26640 62.963 81 30 0 112 192 186 266 7.70e-30 116
MS.gene023126.t1 AT4G26640 54.286 70 31 1 131 200 35 103 5.87e-17 80.5
MS.gene023126.t1 AT4G26640 62.963 81 30 0 112 192 186 266 7.70e-30 116
MS.gene023126.t1 AT4G26640 54.286 70 31 1 131 200 35 103 5.87e-17 80.5
MS.gene023126.t1 AT4G26640 62.963 81 30 0 112 192 186 266 7.70e-30 116
MS.gene023126.t1 AT4G26640 54.286 70 31 1 131 200 35 103 5.87e-17 80.5
MS.gene023126.t1 AT3G01080 68.000 75 24 0 116 190 329 403 8.59e-30 117
MS.gene023126.t1 AT3G01080 54.412 68 30 1 131 198 205 271 8.46e-17 80.5
MS.gene023126.t1 AT3G01080 68.000 75 24 0 116 190 291 365 9.12e-30 117
MS.gene023126.t1 AT3G01080 54.412 68 30 1 131 198 167 233 1.25e-16 79.7
MS.gene023126.t1 AT5G13080 64.000 75 27 0 118 192 54 128 9.46e-30 110
MS.gene023126.t1 AT3G01970 63.889 72 26 0 118 189 52 123 2.66e-29 109
MS.gene023126.t1 AT4G26640 62.963 81 30 0 112 192 322 402 2.66e-29 116
MS.gene023126.t1 AT4G26640 54.286 70 31 1 131 200 171 239 7.55e-17 80.9
MS.gene023126.t1 AT4G26640 62.963 81 30 0 112 192 290 370 2.66e-29 116
MS.gene023126.t1 AT4G26640 54.286 70 31 1 131 200 139 207 8.21e-17 80.5
MS.gene023126.t1 AT4G26640 62.963 81 30 0 112 192 362 442 3.16e-29 117
MS.gene023126.t1 AT4G26640 54.286 70 31 1 131 200 211 279 7.45e-17 80.9
MS.gene023126.t1 AT2G38470 53.535 99 46 0 112 210 343 441 1.29e-28 114
MS.gene023126.t1 AT2G38470 63.333 60 21 1 131 190 184 242 8.63e-17 80.5
MS.gene023126.t1 AT2G30250 61.446 83 32 0 112 194 309 391 2.01e-28 112
MS.gene023126.t1 AT2G30250 42.857 91 37 3 132 210 167 254 1.01e-13 71.2
MS.gene023126.t1 AT5G56270 62.821 78 29 0 115 192 471 548 2.32e-28 114
MS.gene023126.t1 AT5G56270 65.000 60 20 1 131 190 273 331 1.86e-17 82.8
MS.gene023126.t1 AT2G46130 60.759 79 27 1 111 189 10 84 3.32e-27 102
MS.gene023126.t1 AT4G26440 47.107 121 48 3 72 192 329 433 1.98e-26 108
MS.gene023126.t1 AT4G26440 58.333 60 24 1 131 190 178 236 1.10e-14 74.3
MS.gene023126.t1 AT5G64810 43.269 104 59 0 97 200 76 179 2.58e-26 102
MS.gene023126.t1 AT4G04450 42.241 116 65 2 94 207 160 275 3.16e-25 104
MS.gene023126.t1 AT4G04450 42.241 116 65 2 94 207 254 369 9.62e-25 103
MS.gene023126.t1 AT2G04880 56.250 80 35 0 111 190 263 342 1.01e-24 103
MS.gene023126.t1 AT2G04880 55.738 61 26 1 130 190 110 169 1.72e-14 73.6
MS.gene023126.t1 AT2G04880 56.250 80 35 0 111 190 287 366 1.26e-24 103
MS.gene023126.t1 AT2G04880 53.968 63 28 1 130 192 110 171 1.90e-14 73.6
MS.gene023126.t1 AT2G21900 44.330 97 49 2 106 197 79 175 1.59e-24 98.2
MS.gene023126.t1 AT1G62300 28.947 266 137 8 63 288 237 490 7.34e-24 101
MS.gene023126.t1 AT4G22070 47.126 87 45 1 105 190 271 357 2.98e-23 99.8
MS.gene023126.t1 AT4G22070 47.126 87 45 1 105 190 271 357 2.98e-23 99.8
MS.gene023126.t1 AT4G22070 47.126 87 45 1 105 190 271 357 2.98e-23 99.8
MS.gene023126.t1 AT4G22070 47.126 87 45 1 105 190 271 357 2.98e-23 99.8
MS.gene023126.t1 AT2G37260 51.765 85 40 1 103 187 240 323 4.77e-23 97.4
MS.gene023126.t1 AT2G37260 54.430 79 34 2 114 191 65 142 5.46e-17 80.5
MS.gene023126.t1 AT2G37260 51.765 85 40 1 103 187 242 325 4.89e-23 97.4
MS.gene023126.t1 AT2G37260 54.430 79 34 2 114 191 67 144 5.28e-17 80.5
MS.gene023126.t1 AT2G37260 51.765 85 40 1 103 187 322 405 7.67e-23 97.8
MS.gene023126.t1 AT2G37260 54.430 79 34 2 114 191 147 224 7.24e-17 80.5
MS.gene023126.t1 AT1G55600 51.899 79 38 0 112 190 288 366 7.74e-22 95.5
MS.gene023126.t1 AT1G80840 41.026 117 59 4 86 196 100 212 1.40e-21 92.8
MS.gene023126.t1 AT1G68150 42.056 107 60 2 115 219 219 325 1.48e-21 93.6
MS.gene023126.t1 AT4G30935 46.667 90 46 1 115 202 315 404 9.54e-21 92.0
MS.gene023126.t1 AT2G30590 45.783 83 44 1 107 188 289 371 1.33e-20 90.9
MS.gene023126.t1 AT1G18860 49.351 77 38 1 115 190 223 299 1.50e-20 91.7
MS.gene023126.t1 AT4G31800 49.296 71 35 1 130 199 110 180 2.58e-20 88.2
MS.gene023126.t1 AT4G31800 49.296 71 35 1 130 199 175 245 4.25e-20 88.6
MS.gene023126.t1 AT4G01720 49.351 77 38 1 115 190 223 299 4.51e-20 90.1
MS.gene023126.t1 AT1G29280 58.333 60 24 1 132 190 75 134 4.90e-20 87.4
MS.gene023126.t1 AT2G23320 34.437 151 84 3 41 189 162 299 5.67e-20 88.6
MS.gene023126.t1 AT4G01250 59.016 61 24 1 132 191 129 189 1.04e-19 87.4
MS.gene023126.t1 AT2G25000 54.839 62 27 1 130 190 102 163 1.25e-19 85.9
MS.gene023126.t1 AT2G25000 54.839 62 27 1 130 190 102 163 1.25e-19 85.9
MS.gene023126.t1 AT2G34830 43.878 98 52 2 97 191 179 276 1.88e-19 88.2
MS.gene023126.t1 AT2G34830 43.878 98 52 2 97 191 188 285 2.01e-19 88.2
MS.gene023126.t1 AT2G25000 54.839 62 27 1 130 190 124 185 2.21e-19 85.5
MS.gene023126.t1 AT2G25000 54.839 62 27 1 130 190 145 206 3.11e-19 85.5
MS.gene023126.t1 AT5G43290 62.069 58 22 0 130 187 113 170 4.86e-19 85.1
MS.gene023126.t1 AT3G58710 52.113 71 33 1 123 192 62 132 5.14e-19 85.1
MS.gene023126.t1 AT3G58710 52.113 71 33 1 123 192 63 133 5.17e-19 85.1
MS.gene023126.t1 AT5G52830 50.602 83 37 2 132 210 166 248 5.64e-19 85.9
MS.gene023126.t1 AT5G45050 57.353 68 27 2 132 198 1153 1219 6.01e-19 87.4
MS.gene023126.t1 AT5G45050 57.353 68 27 2 132 198 1042 1108 6.20e-19 87.4
MS.gene023126.t1 AT5G45050 57.353 68 27 2 132 198 1181 1247 6.27e-19 87.4
MS.gene023126.t1 AT4G31550 43.902 82 45 1 107 187 221 302 8.69e-19 85.1
MS.gene023126.t1 AT4G31550 40.659 91 53 1 98 187 213 303 9.80e-19 85.1
MS.gene023126.t1 AT5G15130 42.222 90 50 2 105 192 158 247 1.11e-18 86.3
MS.gene023126.t1 AT5G15130 45.570 79 42 1 115 192 211 289 1.24e-18 86.3
MS.gene023126.t1 AT1G30650 41.509 106 57 3 97 199 181 284 1.53e-18 85.5
MS.gene023126.t1 AT2G24570 41.758 91 52 1 98 187 210 300 1.69e-18 84.3
MS.gene023126.t1 AT4G23550 50.000 78 35 2 126 199 135 212 3.20e-18 83.6
MS.gene023126.t1 AT4G24240 39.130 92 55 1 97 187 247 338 1.06e-17 82.4
MS.gene023126.t1 AT3G01080 54.412 68 30 1 131 198 205 271 2.90e-17 80.9
MS.gene023126.t1 AT1G69810 44.186 86 46 2 115 198 129 214 4.58e-17 80.5
MS.gene023126.t1 AT1G69810 44.186 86 46 2 115 198 187 272 5.85e-17 80.5
MS.gene023126.t1 AT5G28650 40.476 84 49 1 105 187 236 319 6.43e-17 80.1
MS.gene023126.t1 AT3G04670 39.286 84 50 1 105 187 236 319 3.42e-16 77.8
MS.gene023126.t1 AT3G56400 33.562 146 64 4 55 185 50 177 9.06e-14 70.5
MS.gene023126.t1 AT2G46400 39.048 105 59 2 84 185 59 161 9.69e-14 70.5
MS.gene023126.t1 AT1G66560 51.724 58 25 1 131 185 103 160 1.00e-13 69.7
MS.gene023126.t1 AT5G45260 39.048 105 60 2 96 197 1174 1277 2.61e-13 70.9
MS.gene023126.t1 AT4G12020 42.105 95 41 2 57 151 581 661 2.83e-13 70.5
MS.gene023126.t1 AT4G12020 50.000 62 30 1 129 190 466 526 2.10e-12 68.2
MS.gene023126.t1 AT4G12020 42.105 95 41 2 57 151 581 661 3.00e-13 70.5
MS.gene023126.t1 AT4G12020 50.000 62 30 1 129 190 466 526 2.16e-12 68.2
MS.gene023126.t1 AT4G12020 42.105 95 41 2 57 151 581 661 3.09e-13 70.5
MS.gene023126.t1 AT4G12020 50.000 62 30 1 129 190 466 526 2.25e-12 67.8
MS.gene023126.t1 AT4G12020 42.105 95 41 2 57 151 581 661 3.09e-13 70.5
MS.gene023126.t1 AT4G12020 50.000 62 30 1 129 190 466 526 2.25e-12 67.8
MS.gene023126.t1 AT4G12020 42.105 95 41 2 57 151 581 661 3.11e-13 70.5
MS.gene023126.t1 AT4G12020 50.000 62 30 1 129 190 466 526 2.46e-12 67.8
MS.gene023126.t1 AT4G12020 42.105 95 41 2 57 151 581 661 3.11e-13 70.5
MS.gene023126.t1 AT4G12020 50.000 62 30 1 129 190 466 526 1.96e-12 68.2
MS.gene023126.t1 AT4G12020 42.105 95 41 2 57 151 581 661 3.11e-13 70.5
MS.gene023126.t1 AT4G12020 50.000 62 30 1 129 190 466 526 1.96e-12 68.2
MS.gene023126.t1 AT4G12020 42.105 95 41 2 57 151 581 661 3.15e-13 70.5
MS.gene023126.t1 AT4G12020 50.000 62 30 1 129 190 466 526 2.13e-12 68.2
MS.gene023126.t1 AT4G12020 42.105 95 41 2 57 151 581 661 3.26e-13 70.5
MS.gene023126.t1 AT4G12020 50.000 62 30 1 129 190 466 526 2.35e-12 67.8
MS.gene023126.t1 AT4G12020 42.105 95 41 2 57 151 514 594 3.33e-13 70.5
MS.gene023126.t1 AT4G12020 50.000 62 30 1 129 190 399 459 2.45e-12 67.8
MS.gene023126.t1 AT4G12020 42.105 95 41 2 57 151 581 661 3.73e-13 70.1
MS.gene023126.t1 AT4G12020 50.000 62 30 1 129 190 466 526 2.95e-12 67.4
MS.gene023126.t1 AT2G40740 36.975 119 68 3 80 192 123 240 3.94e-13 68.6
MS.gene023126.t1 AT2G40740 36.975 119 68 3 80 192 132 249 4.42e-13 68.6
MS.gene023126.t1 AT1G66600 50.000 60 27 1 129 185 101 160 1.82e-12 66.2
MS.gene023126.t1 AT4G11070 51.724 58 25 1 131 185 109 166 2.43e-12 66.2
MS.gene023126.t1 AT4G11070 51.724 58 25 1 131 185 141 198 2.74e-12 66.6
MS.gene023126.t1 AT1G80590 46.032 63 31 1 132 191 86 148 7.52e-12 64.3
MS.gene023126.t1 AT5G01900 50.877 57 25 1 132 185 111 167 1.17e-11 64.3
MS.gene023126.t1 AT1G66550 49.123 57 26 1 132 185 104 160 1.34e-11 63.9
MS.gene023126.t1 AT1G66550 49.123 57 26 1 132 185 109 165 1.63e-11 63.5
MS.gene023126.t1 AT5G24110 39.506 81 41 3 113 185 90 170 1.90e-11 63.9
MS.gene023126.t1 AT4G23810 50.000 58 26 1 131 185 158 215 4.30e-11 63.2
MS.gene023126.t1 AT2G40750 40.230 87 44 2 107 185 123 209 7.21e-11 62.4

Find 69 sgRNAs with CRISPR-Local

Find 101 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGCAGCCGCATTGCCTCTT+AGG 0.193434 4.3:+19171421 None:intergenic
TCACCACTTGCAACTTCTTT+TGG 0.209987 4.3:-19172529 MS.gene023126:CDS
AATGTTGTTGTGTGAATAAA+TGG 0.267587 4.3:+19171251 None:intergenic
AAGCCTTCAGCTGGAGAATT+AGG 0.278295 4.3:-19172451 MS.gene023126:CDS
GGAGTAGAAGAAGAAGATTC+AGG 0.323631 4.3:-19172361 MS.gene023126:CDS
GGATACAGATGGAGAAAATA+TGG 0.347876 4.3:-19172065 MS.gene023126:CDS
TATGTTGTTATCACAGTTGT+TGG 0.355489 4.3:+19171477 None:intergenic
CATTCTACTAATACCGTTGC+TGG 0.360284 4.3:-19171276 MS.gene023126:CDS
CAACTTCCTCCTGATCAATA+TGG 0.365572 4.3:-19171198 MS.gene023126:CDS
ACACCTACTCCTTTCTCATA+TGG 0.380056 4.3:-19171372 MS.gene023126:CDS
TGCAGCCGCATTGCCTCTTA+GGG 0.408589 4.3:+19171422 None:intergenic
TCCCTTCCATGTTCCTCAAC+CGG 0.410043 4.3:-19171158 MS.gene023126:CDS
TCCTTTCTTCTTATCCACCT+TGG 0.434292 4.3:+19172154 None:intergenic
TTTATAATTTACCTAGGGTA+TGG 0.441482 4.3:+19172020 None:intergenic
ATGTTGTTATCACAGTTGTT+GGG 0.446092 4.3:+19171478 None:intergenic
ATAATTAGTTGTGGTTGGTC+CGG 0.459040 4.3:+19171139 None:intergenic
CGCATTGCCTCTTAGGGAAG+TGG 0.472239 4.3:+19171428 None:intergenic
GGTGTAGATAGCAAATTAGA+AGG 0.479581 4.3:+19171390 None:intergenic
AGTTGTGGTTGGTCCGGTTG+AGG 0.481322 4.3:+19171145 None:intergenic
CACCTACTCCTTTCTCATAT+GGG 0.481494 4.3:-19171371 MS.gene023126:CDS
AGATGAGTTAAGTGTAGCAA+GGG 0.485632 4.3:+19172414 None:intergenic
AATTCCTCATCTTCTGAAGC+TGG 0.488007 4.3:-19172385 MS.gene023126:CDS
TGAAGGAGTCCATATTGATC+AGG 0.488151 4.3:+19171189 None:intergenic
TGTTGGTTGAGTGATATTGA+AGG 0.491271 4.3:+19171302 None:intergenic
CCTCTTAGGGAAGTGGGGAC+AGG 0.494658 4.3:+19171435 None:intergenic
GTATTAGTAGAATGTGTTGT+TGG 0.497063 4.3:+19171285 None:intergenic
TGGAAGGGACAATGTCTTGA+AGG 0.497629 4.3:+19171172 None:intergenic
GGAAATCAAAAGCCTTCAGC+TGG 0.499259 4.3:-19172460 MS.gene023126:CDS
GATTAATAATTAGTTGTGGT+TGG 0.509207 4.3:+19171134 None:intergenic
TAGATGAGTTAAGTGTAGCA+AGG 0.516970 4.3:+19172413 None:intergenic
CCTGTCCCCACTTCCCTAAG+AGG 0.516979 4.3:-19171435 MS.gene023126:CDS
GAAGTTGATCAGCTAGAAGA+TGG 0.517078 4.3:-19172086 MS.gene023126:CDS
TGTGGTGGTGCATGTGGAGA+AGG 0.522721 4.3:+19171328 None:intergenic
AGTTTCACTGAAAGTTTACA+AGG 0.526044 4.3:-19172574 MS.gene023126:CDS
ACCAAGGTGGATAAGAAGAA+AGG 0.531162 4.3:-19172155 MS.gene023126:CDS
ACTATCTCCTTCTTCATCAG+AGG 0.542665 4.3:-19172503 MS.gene023126:CDS
ACTGTGATAACAACATATGA+AGG 0.544058 4.3:-19171471 MS.gene023126:CDS
AGGTGTTGTGGTGGTGCATG+TGG 0.547185 4.3:+19171322 None:intergenic
GAGTGATATTGAAGGTGTTG+TGG 0.553555 4.3:+19171310 None:intergenic
TTTGTCATGAAAGCAAACCT+TGG 0.560103 4.3:+19172113 None:intergenic
GCATTGCCTCTTAGGGAAGT+GGG 0.561932 4.3:+19171429 None:intergenic
AAGTTTGACCCATATGAGAA+AGG 0.572488 4.3:+19171363 None:intergenic
TGAATAAATGGAACCAGCAA+CGG 0.572616 4.3:+19171263 None:intergenic
GAAAGGAGAGAAGAAGCAGA+AGG 0.575055 4.3:-19172138 MS.gene023126:CDS
ATGTGGAGAAGGAGATCTTG+AGG 0.575636 4.3:+19171339 None:intergenic
GTTGGTCCGGTTGAGGAACA+TGG 0.576157 4.3:+19171152 None:intergenic
TGTGGAGAAGGAGATCTTGA+GGG 0.577615 4.3:+19171340 None:intergenic
TCCTCCAGCTTCAGAAGATG+AGG 0.581022 4.3:+19172381 None:intergenic
AGCTAGAAGATGGATACAGA+TGG 0.593410 4.3:-19172076 MS.gene023126:CDS
AGAAGAAGCAGAAGGAACCA+AGG 0.601386 4.3:-19172130 MS.gene023126:CDS
TCAAGAATAGTCCATACCCT+AGG 0.603668 4.3:-19172031 MS.gene023126:intron
AAGTTTACAAGGAGGAAACA+TGG 0.604167 4.3:-19172563 MS.gene023126:CDS
TCCGGTTGAGGAACATGGAA+GGG 0.605140 4.3:+19171157 None:intergenic
GTCCGGTTGAGGAACATGGA+AGG 0.610467 4.3:+19171156 None:intergenic
TCAGCTGGAGAATTAGGTGG+TGG 0.610560 4.3:-19172445 MS.gene023126:CDS
CCACCTAATTCTCCAGCTGA+AGG 0.620428 4.3:+19172448 None:intergenic
GACCCATATGAGAAAGGAGT+AGG 0.632698 4.3:+19171369 None:intergenic
ACTCCAAAAGAAGTTGCAAG+TGG 0.634162 4.3:+19172526 None:intergenic
AGGAGTCCATATTGATCAGG+AGG 0.634490 4.3:+19171192 None:intergenic
TCTTGATTAATAATTAGTTG+TGG 0.637795 4.3:+19171130 None:intergenic
TGATATTGAAGGTGTTGTGG+TGG 0.638159 4.3:+19171313 None:intergenic
TCCTCATCTTCTGAAGCTGG+AGG 0.647810 4.3:-19172382 MS.gene023126:CDS
GGGCAGGTTAAAGAAGAACC+AGG 0.654664 4.3:-19172319 MS.gene023126:CDS
TTCACTGAAAGTTTACAAGG+AGG 0.659840 4.3:-19172571 MS.gene023126:CDS
CCTTCAGCTGGAGAATTAGG+TGG 0.660060 4.3:-19172448 MS.gene023126:CDS
CATTGCCTCTTAGGGAAGTG+GGG 0.682570 4.3:+19171430 None:intergenic
GAAATACAGGAACACCAAGG+TGG 0.704287 4.3:-19172168 MS.gene023126:intron
CACTTCCCTAAGAGGCAATG+CGG 0.742780 4.3:-19171427 MS.gene023126:CDS
AATGAAATACAGGAACACCA+AGG 0.750672 4.3:-19172171 MS.gene023126:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTACTTAATATATGTTT+TGG - chr4.3:19171526-19171545 MS.gene023126:CDS 10.0%
!! AACTGTTTATAATTTACCTA+GGG + chr4.3:19171708-19171727 None:intergenic 20.0%
!! ATATATATTAATGTCTCTCT+TGG + chr4.3:19171940-19171959 None:intergenic 20.0%
!! GAAAGAGAAAGAAAAATATT+GGG - chr4.3:19171381-19171400 MS.gene023126:CDS 20.0%
!! TAAAAACAAAAGGAAATGAA+AGG - chr4.3:19171978-19171997 MS.gene023126:intron 20.0%
!! TATATATTAATGTCTCTCTT+GGG + chr4.3:19171939-19171958 None:intergenic 20.0%
!!! TATTGACTTTGTTTTAATAG+TGG + chr4.3:19171753-19171772 None:intergenic 20.0%
! AATGTTGTTGTGTGAATAAA+TGG + chr4.3:19172472-19172491 None:intergenic 25.0%
! AGACAATTAAGTTAAAGAAG+AGG + chr4.3:19171462-19171481 None:intergenic 25.0%
! CAACTGTTTATAATTTACCT+AGG + chr4.3:19171709-19171728 None:intergenic 25.0%
! GGAAAGAGAAAGAAAAATAT+TGG - chr4.3:19171380-19171399 MS.gene023126:CDS 25.0%
! TACTTGATGTAATTTGAACA+TGG + chr4.3:19172025-19172044 None:intergenic 25.0%
! TAGACTATAGAGTATAGTAT+AGG + chr4.3:19171809-19171828 None:intergenic 25.0%
! TCATAGCTAGTAAAAACAAA+AGG - chr4.3:19171968-19171987 MS.gene023126:intron 25.0%
! TTATAAACAGTTGCATTCAA+TGG - chr4.3:19171716-19171735 MS.gene023126:intron 25.0%
! TTTATAATTTACCTAGGGTA+TGG + chr4.3:19171703-19171722 None:intergenic 25.0%
!!! CTTTGTTTTAATAGTGGTAA+TGG + chr4.3:19171747-19171766 None:intergenic 25.0%
!!! TATGTTTTGGAATGAAATAC+AGG - chr4.3:19171539-19171558 MS.gene023126:CDS 25.0%
AAACCCTTGAGTTTAATTGA+TGG - chr4.3:19171486-19171505 MS.gene023126:CDS 30.0%
ACTGTGATAACAACATATGA+AGG - chr4.3:19172249-19172268 MS.gene023126:intron 30.0%
AGTTTCACTGAAAGTTTACA+AGG - chr4.3:19171146-19171165 MS.gene023126:CDS 30.0%
ATGTTGTTATCACAGTTGTT+GGG + chr4.3:19172245-19172264 None:intergenic 30.0%
GAAATGAAAGGAAAGTCAAA+AGG - chr4.3:19171990-19172009 MS.gene023126:intron 30.0%
GTATTAGTAGAATGTGTTGT+TGG + chr4.3:19172438-19172457 None:intergenic 30.0%
TATGTTGTTATCACAGTTGT+TGG + chr4.3:19172246-19172265 None:intergenic 30.0%
TCTAGTTACCATCAAAACAA+TGG - chr4.3:19172067-19172086 MS.gene023126:CDS 30.0%
!! GAAATTGCATTTGATTTTGC+AGG - chr4.3:19172154-19172173 MS.gene023126:CDS 30.0%
!! GACAAGAAAGCTCTAAAAAT+GGG - chr4.3:19171423-19171442 MS.gene023126:CDS 30.0%
!!! GTTTTTTCTTCTGTTGATCA+AGG - chr4.3:19171239-19171258 MS.gene023126:CDS 30.0%
AAGTTTACAAGGAGGAAACA+TGG - chr4.3:19171157-19171176 MS.gene023126:CDS 35.0%
AAGTTTGACCCATATGAGAA+AGG + chr4.3:19172360-19172379 None:intergenic 35.0%
AATGAAATACAGGAACACCA+AGG - chr4.3:19171549-19171568 MS.gene023126:intron 35.0%
AGATGAGTTAAGTGTAGCAA+GGG + chr4.3:19171309-19171328 None:intergenic 35.0%
CAAGTATACAACTCTAGCTA+GGG - chr4.3:19172039-19172058 MS.gene023126:CDS 35.0%
GAAAAAACCTCTGATGAAGA+AGG + chr4.3:19171227-19171246 None:intergenic 35.0%
GAGAAAGAAAAATATTGGGC+AGG - chr4.3:19171385-19171404 MS.gene023126:CDS 35.0%
GCACCATCAATTAAACTCAA+GGG + chr4.3:19171492-19171511 None:intergenic 35.0%
GGATACAGATGGAGAAAATA+TGG - chr4.3:19171655-19171674 MS.gene023126:intron 35.0%
GGTGTAGATAGCAAATTAGA+AGG + chr4.3:19172333-19172352 None:intergenic 35.0%
TAGATGAGTTAAGTGTAGCA+AGG + chr4.3:19171310-19171329 None:intergenic 35.0%
TCAAGTATACAACTCTAGCT+AGG - chr4.3:19172038-19172057 MS.gene023126:CDS 35.0%
TGAATAAATGGAACCAGCAA+CGG + chr4.3:19172460-19172479 None:intergenic 35.0%
TGCACCATCAATTAAACTCA+AGG + chr4.3:19171493-19171512 None:intergenic 35.0%
TTCACTGAAAGTTTACAAGG+AGG - chr4.3:19171149-19171168 MS.gene023126:CDS 35.0%
TTTGTCATGAAAGCAAACCT+TGG + chr4.3:19171610-19171629 None:intergenic 35.0%
! TGTTGGTTGAGTGATATTGA+AGG + chr4.3:19172421-19172440 None:intergenic 35.0%
!! GGACAAGAAAGCTCTAAAAA+TGG - chr4.3:19171422-19171441 MS.gene023126:CDS 35.0%
!!! TACACAAGCCATTGTTTTGA+TGG + chr4.3:19172078-19172097 None:intergenic 35.0%
!!! TTTTTAGAGCTTTCTTGTCC+TGG + chr4.3:19171422-19171441 None:intergenic 35.0%
AATGTCTCTCTTGGGAACAT+GGG + chr4.3:19171931-19171950 None:intergenic 40.0%
ACACCTACTCCTTTCTCATA+TGG - chr4.3:19172348-19172367 MS.gene023126:CDS 40.0%
ACCAAGGTGGATAAGAAGAA+AGG - chr4.3:19171565-19171584 MS.gene023126:intron 40.0%
ACTATCTCCTTCTTCATCAG+AGG - chr4.3:19171217-19171236 MS.gene023126:CDS 40.0%
ACTCCAAAAGAAGTTGCAAG+TGG + chr4.3:19171197-19171216 None:intergenic 40.0%
AGCTAGAAGATGGATACAGA+TGG - chr4.3:19171644-19171663 MS.gene023126:intron 40.0%
CAACTTCCTCCTGATCAATA+TGG - chr4.3:19172522-19172541 MS.gene023126:CDS 40.0%
CACCTACTCCTTTCTCATAT+GGG - chr4.3:19172349-19172368 MS.gene023126:CDS 40.0%
CATTCTACTAATACCGTTGC+TGG - chr4.3:19172444-19172463 MS.gene023126:CDS 40.0%
GGAGTAGAAGAAGAAGATTC+AGG - chr4.3:19171359-19171378 MS.gene023126:CDS 40.0%
TAATGTCTCTCTTGGGAACA+TGG + chr4.3:19171932-19171951 None:intergenic 40.0%
TCAAGAATAGTCCATACCCT+AGG - chr4.3:19171689-19171708 MS.gene023126:intron 40.0%
TCCTTTCTTCTTATCCACCT+TGG + chr4.3:19171569-19171588 None:intergenic 40.0%
TGAAGGAGTCCATATTGATC+AGG + chr4.3:19172534-19172553 None:intergenic 40.0%
! GAAGTTGATCAGCTAGAAGA+TGG - chr4.3:19171634-19171653 MS.gene023126:intron 40.0%
! GATTTTGCAGGAGCTATTAC+AGG - chr4.3:19172166-19172185 MS.gene023126:intron 40.0%
! TCACCACTTGCAACTTCTTT+TGG - chr4.3:19171191-19171210 MS.gene023126:CDS 40.0%
!! AATTCCTCATCTTCTGAAGC+TGG - chr4.3:19171335-19171354 MS.gene023126:CDS 40.0%
!! GAGTGATATTGAAGGTGTTG+TGG + chr4.3:19172413-19172432 None:intergenic 40.0%
!! TGATATTGAAGGTGTTGTGG+TGG + chr4.3:19172410-19172429 None:intergenic 40.0%
AAGCCTTCAGCTGGAGAATT+AGG - chr4.3:19171269-19171288 MS.gene023126:CDS 45.0%
AGAAGAAGCAGAAGGAACCA+AGG - chr4.3:19171590-19171609 MS.gene023126:intron 45.0%
AGGAGTCCATATTGATCAGG+AGG + chr4.3:19172531-19172550 None:intergenic 45.0%
ATGTCTCTCTTGGGAACATG+GGG + chr4.3:19171930-19171949 None:intergenic 45.0%
ATGTGGAGAAGGAGATCTTG+AGG + chr4.3:19172384-19172403 None:intergenic 45.0%
GAAAGGAGAGAAGAAGCAGA+AGG - chr4.3:19171582-19171601 MS.gene023126:intron 45.0%
GAAATACAGGAACACCAAGG+TGG - chr4.3:19171552-19171571 MS.gene023126:intron 45.0%
GACCCATATGAGAAAGGAGT+AGG + chr4.3:19172354-19172373 None:intergenic 45.0%
GGAAATCAAAAGCCTTCAGC+TGG - chr4.3:19171260-19171279 MS.gene023126:CDS 45.0%
TGGAAGGGACAATGTCTTGA+AGG + chr4.3:19172551-19172570 None:intergenic 45.0%
TGTGGAGAAGGAGATCTTGA+GGG + chr4.3:19172383-19172402 None:intergenic 45.0%
CACTTCCCTAAGAGGCAATG+CGG - chr4.3:19172293-19172312 MS.gene023126:intron 50.0%
CATTGCCTCTTAGGGAAGTG+GGG + chr4.3:19172293-19172312 None:intergenic 50.0%
CCACCTAATTCTCCAGCTGA+AGG + chr4.3:19171275-19171294 None:intergenic 50.0%
CCTTCAGCTGGAGAATTAGG+TGG - chr4.3:19171272-19171291 MS.gene023126:CDS 50.0%
GCATTGCCTCTTAGGGAAGT+GGG + chr4.3:19172294-19172313 None:intergenic 50.0%
GGGCAGGTTAAAGAAGAACC+AGG - chr4.3:19171401-19171420 MS.gene023126:CDS 50.0%
TCAGCTGGAGAATTAGGTGG+TGG - chr4.3:19171275-19171294 MS.gene023126:CDS 50.0%
TCCCTTCCATGTTCCTCAAC+CGG - chr4.3:19172562-19172581 MS.gene023126:CDS 50.0%
TCCGGTTGAGGAACATGGAA+GGG + chr4.3:19172566-19172585 None:intergenic 50.0%
TCCTCCAGCTTCAGAAGATG+AGG + chr4.3:19171342-19171361 None:intergenic 50.0%
!! TCCTCATCTTCTGAAGCTGG+AGG - chr4.3:19171338-19171357 MS.gene023126:CDS 50.0%
CGCATTGCCTCTTAGGGAAG+TGG + chr4.3:19172295-19172314 None:intergenic 55.0%
GTCCGGTTGAGGAACATGGA+AGG + chr4.3:19172567-19172586 None:intergenic 55.0%
GTTGGTCCGGTTGAGGAACA+TGG + chr4.3:19172571-19172590 None:intergenic 55.0%
TGCAGCCGCATTGCCTCTTA+GGG + chr4.3:19172301-19172320 None:intergenic 55.0%
TTGCAGCCGCATTGCCTCTT+AGG + chr4.3:19172302-19172321 None:intergenic 55.0%
! AGGTGTTGTGGTGGTGCATG+TGG + chr4.3:19172401-19172420 None:intergenic 55.0%
! AGTTGTGGTTGGTCCGGTTG+AGG + chr4.3:19172578-19172597 None:intergenic 55.0%
! TGTGGTGGTGCATGTGGAGA+AGG + chr4.3:19172395-19172414 None:intergenic 55.0%
CCTCTTAGGGAAGTGGGGAC+AGG + chr4.3:19172288-19172307 None:intergenic 60.0%
CCTGTCCCCACTTCCCTAAG+AGG - chr4.3:19172285-19172304 MS.gene023126:intron 60.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 19171143 19172599 19171143 ID=MS.gene023126
chr4.3 mRNA 19171143 19172599 19171143 ID=MS.gene023126.t1;Parent=MS.gene023126
chr4.3 exon 19172298 19172599 19172298 ID=MS.gene023126.t1.exon1;Parent=MS.gene023126.t1
chr4.3 CDS 19172298 19172599 19172298 ID=cds.MS.gene023126.t1;Parent=MS.gene023126.t1
chr4.3 exon 19172032 19172181 19172032 ID=MS.gene023126.t1.exon2;Parent=MS.gene023126.t1
chr4.3 CDS 19172032 19172181 19172032 ID=cds.MS.gene023126.t1;Parent=MS.gene023126.t1
chr4.3 exon 19171143 19171566 19171143 ID=MS.gene023126.t1.exon3;Parent=MS.gene023126.t1
chr4.3 CDS 19171143 19171566 19171143 ID=cds.MS.gene023126.t1;Parent=MS.gene023126.t1
Gene Sequence

>MS.gene023126

ATGAGTTTCACTGAAAGTTTACAAGGAGGAAACATGGATCACTACAATTCACCACTTGCAACTTCTTTTGGAGTACTATCTCCTTCTTCATCAGAGGTTTTTTCTTCTGTTGATCAAGGAAATCAAAAGCCTTCAGCTGGAGAATTAGGTGGTGGTGATCAAACCCTTGCTACACTTAACTCATCTATCTCTAATTCCTCATCTTCTGAAGCTGGAGGAGTAGAAGAAGAAGATTCAGGAAAGAGAAAGAAAAATATTGGGCAGGTTAAAGAAGAACCAGGACAAGAAAGCTCTAAAAATGGGTAAATCTTTTCTTCCTCTTCTTTAACTTAATTGTCTCATCAAACCCTTGAGTTTAATTGATGGTGCAACATATGTAGTTATTATTACTTAATATATGTTTTGGAATGAAATACAGGAACACCAAGGTGGATAAGAAGAAAGGAGAGAAGAAGCAGAAGGAACCAAGGTTTGCTTTCATGACAAAGAGTGAAGTTGATCAGCTAGAAGATGGATACAGATGGAGAAAATATGGACAGAAAGCTGTCAAGAATAGTCCATACCCTAGGTAAATTATAAACAGTTGCATTCAATGGAAGATCCATTACCACTATTAAAACAAAGTCAATAATTTCACATAAAACTAAATCATATACTAACTGACCTATACTATACTCTATAGTCTATAGATCTGCTTGATGTAGATGTTAATTTGTAGTTAAATTCATCAAATTCAATTCAAATTTCTTTATACATATATTCAAATCTTATTTATTTATTTACACCCCATGTTCCCAAGAGAGACATTAATATATATTAATTGAATCATAGCTAGTAAAAACAAAAGGAAATGAAAGGAAAGTCAAAAGGAAATTAAAACCATGTTCAAATTACATCAAGTATACAACTCTAGCTAGGGTCTACTCTAGTTACCATCAAAACAATGGCTTGTGTATATTTCTTAGCATTGATTAAATTAAGATGAAAGTAATATGATGAATGAATTAATGAGAAATTGCATTTGATTTTGCAGGAGCTATTACAGGTGTACAACACAGAAATGTACAGTGAAAAAACGCGTAGAAAGATCATATGAAGACCCAACAACTGTGATAACAACATATGAAGGTCAGCATAATCATCCTGTCCCCACTTCCCTAAGAGGCAATGCGGCTGCAATGTTCACACCTTCTAATTTGCTATCTACACCTACTCCTTTCTCATATGGGTCAAACTTCCCTCAAGATCTCCTTCTCCACATGCACCACCACAACACCTTCAATATCACTCAACCAACAACACATTCTACTAATACCGTTGCTGGTTCCATTTATTCACACAACAACATTAACAACTCACTTCTTCAACAATATCAACAACAACTTCCTCCTGATCAATATGGACTCCTTCAAGACATTGTCCCTTCCATGTTCCTCAACCGGACCAACCACAACTAA
Protein sequence

>MS.gene023126.t1

MSFTESLQGGNMDHYNSPLATSFGVLSPSSSEVFSSVDQGNQKPSAGELGGGDQTLATLNSSISNSSSSEAGGVEEEDSGKRKKNIGQVKEEPGQESSKNGNTKVDKKKGEKKQKEPRFAFMTKSEVDQLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCTVKKRVERSYEDPTTVITTYEGQHNHPVPTSLRGNAAAMFTPSNLLSTPTPFSYGSNFPQDLLLHMHHHNTFNITQPTTHSTNTVAGSIYSHNNINNSLLQQYQQQLPPDQYGLLQDIVPSMFLNRTNHN