AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene023143

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene023143.t1 MTR_4g094638 90.000 160 16 0 1 160 8 167 7.68e-88 254
MS.gene023143.t1 MTR_4g094632 68.590 156 43 3 1 156 8 157 2.28e-67 202
MS.gene023143.t1 MTR_8g079502 38.650 163 82 6 1 151 8 164 9.94e-28 102
MS.gene023143.t1 MTR_1g047550 38.037 163 83 6 1 151 8 164 3.92e-27 100
MS.gene023143.t1 MTR_4g131030 34.659 176 88 4 1 151 8 181 6.26e-26 98.6
MS.gene023143.t1 MTR_1g063160 37.423 163 84 5 1 151 8 164 7.61e-25 94.7
MS.gene023143.t1 MTR_1g054265 37.195 164 83 5 1 151 8 164 1.23e-23 91.3
MS.gene023143.t1 MTR_8g051580 35.849 159 86 4 4 151 11 164 2.84e-23 90.5
MS.gene023143.t1 MTR_3g080940 32.500 160 95 3 1 148 15 173 9.54e-22 87.4
MS.gene023143.t1 MTR_8g046350 32.903 155 92 4 3 151 10 158 6.03e-21 84.3
MS.gene023143.t1 MTR_7g028448 38.060 134 74 2 8 137 25 153 1.36e-20 83.6
MS.gene023143.t1 MTR_4g036915 38.060 134 74 2 8 137 25 153 1.36e-20 83.6
MS.gene023143.t1 MTR_3g030770 36.552 145 79 4 1 133 15 158 7.97e-19 80.1
MS.gene023143.t1 MTR_1g108510 38.053 113 69 1 1 113 15 126 1.24e-18 79.7
MS.gene023143.t1 MTR_8g043650 32.544 169 101 4 1 157 15 182 3.46e-18 78.6
MS.gene023143.t1 MTR_1g108580 41.000 100 58 1 1 100 15 113 1.64e-17 76.6
MS.gene023143.t1 MTR_2g093190 32.768 177 92 5 1 151 15 190 1.96e-17 76.6
MS.gene023143.t1 MTR_1g106070 39.252 107 60 2 4 106 18 123 2.55e-17 75.1
MS.gene023143.t1 MTR_3g052870 40.000 110 61 2 1 106 15 123 5.24e-17 75.1
MS.gene023143.t1 MTR_1g105920 40.000 110 61 2 1 106 15 123 1.75e-16 73.9
MS.gene023143.t1 MTR_5g053390 53.846 65 30 0 1 65 15 79 2.31e-16 73.9
MS.gene023143.t1 MTR_2g009890 32.653 147 79 3 4 134 11 153 3.11e-16 73.9
MS.gene023143.t1 MTR_5g045560 35.833 120 56 2 1 112 15 121 3.15e-16 73.6
MS.gene023143.t1 MTR_7g075870 32.061 131 83 1 1 131 8 132 6.12e-16 72.0
MS.gene023143.t1 MTR_3g052920 39.252 107 60 2 4 106 18 123 7.91e-16 72.4
MS.gene023143.t1 MTR_1g105910 30.178 169 105 2 1 157 15 182 8.97e-16 72.0
MS.gene023143.t1 MTR_1g012570 29.518 166 104 2 1 154 15 179 1.25e-15 71.6
MS.gene023143.t1 MTR_2g085250 53.968 63 29 0 1 63 15 77 1.43e-15 71.6
MS.gene023143.t1 MTR_2g085280 53.968 63 29 0 1 63 15 77 1.57e-15 71.6
MS.gene023143.t1 MTR_1g105905 37.963 108 62 2 4 107 1 107 1.99e-15 70.9
MS.gene023143.t1 MTR_2g030740 55.556 63 28 0 1 63 15 77 2.16e-15 71.2
MS.gene023143.t1 MTR_0121s0100 40.426 94 55 1 1 94 15 107 2.57e-15 68.6
MS.gene023143.t1 MTR_1g077360 49.231 65 33 0 1 65 15 79 3.10e-15 70.9
MS.gene023143.t1 MTR_1g075600 50.769 65 32 0 1 65 15 79 4.83e-15 70.1
MS.gene023143.t1 MTR_7g075870 31.818 132 83 2 1 131 8 133 1.05e-14 68.9
MS.gene023143.t1 MTR_5g066180 34.559 136 65 5 4 131 11 130 1.12e-14 68.9
MS.gene023143.t1 MTR_3g030780 36.000 100 63 1 1 100 15 113 3.00e-14 65.9
MS.gene023143.t1 MTR_5g055100 49.231 65 33 0 1 65 15 79 4.27e-14 67.8
MS.gene023143.t1 MTR_6g081890 60.714 84 19 2 56 139 80 149 7.12e-14 65.9
MS.gene023143.t1 MTR_0121s0080 35.652 115 70 2 1 115 15 125 1.09e-13 66.6
MS.gene023143.t1 MTR_4g109830 39.080 87 47 2 4 89 11 92 1.18e-13 66.2
MS.gene023143.t1 MTR_2g105290 31.410 156 87 6 4 145 21 170 1.52e-13 65.1
MS.gene023143.t1 MTR_1g101970 46.774 62 33 0 1 62 8 69 1.77e-13 65.1
MS.gene023143.t1 MTR_3g005530 32.203 118 63 2 4 104 11 128 2.10e-13 65.5
MS.gene023143.t1 MTR_5g031000 30.894 123 74 3 4 123 11 125 4.40e-13 65.1
MS.gene023143.t1 MTR_5g031000 30.894 123 74 3 4 123 11 125 4.81e-13 64.7
MS.gene023143.t1 MTR_3g067875 56.364 55 24 0 4 58 1 55 7.21e-13 60.5
MS.gene023143.t1 MTR_8g033220 28.777 139 94 1 1 139 8 141 7.30e-13 64.3
MS.gene023143.t1 MTR_5g032150 33.333 132 74 5 4 131 11 132 7.98e-13 63.9
MS.gene023143.t1 MTR_4g102530 43.548 62 35 0 1 62 8 69 8.26e-13 63.5
MS.gene023143.t1 MTR_8g033220 29.008 131 88 1 1 131 8 133 8.70e-13 63.9
MS.gene023143.t1 MTR_5g032520 33.333 132 74 5 4 131 11 132 1.06e-12 63.9
MS.gene023143.t1 MTR_4g127140 35.000 100 64 1 8 107 25 123 1.20e-12 62.8
MS.gene023143.t1 MTR_3g452380 30.469 128 83 2 4 131 26 147 1.93e-12 63.2
MS.gene023143.t1 MTR_1g053070 31.008 129 87 1 4 132 11 137 3.46e-12 62.8
MS.gene023143.t1 MTR_4g093970 31.298 131 80 3 4 131 37 160 3.46e-12 62.4
MS.gene023143.t1 MTR_8g086290 40.299 67 40 0 8 74 25 91 3.49e-12 61.6
MS.gene023143.t1 MTR_3g109930 29.286 140 90 2 10 140 17 156 8.50e-12 60.5
MS.gene023143.t1 MTR_0003s0590 41.429 70 41 0 4 73 11 80 1.01e-11 61.6
MS.gene023143.t1 MTR_3g113030 29.134 127 67 3 4 123 11 121 1.25e-11 60.8
MS.gene023143.t1 MTR_5g021270 40.625 64 36 1 1 62 8 71 3.02e-11 59.7
MS.gene023143.t1 MTR_5g021270 40.625 64 36 1 1 62 8 71 3.11e-11 59.7
MS.gene023143.t1 MTR_3g102570 45.161 62 33 1 4 64 11 72 3.12e-11 60.5
MS.gene023143.t1 MTR_4g036050 34.694 98 61 2 4 98 11 108 4.84e-11 58.5
MS.gene023143.t1 MTR_4g036050 34.694 98 61 2 4 98 11 108 5.20e-11 58.5
MS.gene023143.t1 MTR_4g036050 34.694 98 61 2 4 98 11 108 5.57e-11 58.2
MS.gene023143.t1 MTR_4g036050 34.694 98 61 2 4 98 11 108 5.86e-11 58.5
MS.gene023143.t1 MTR_7g062350 35.514 107 66 2 3 109 29 132 6.32e-11 59.3
MS.gene023143.t1 MTR_4g051538 43.636 55 31 0 11 65 25 79 6.97e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene023143.t1 AT2G34440 37.126 167 85 3 1 149 8 172 1.73e-30 108
MS.gene023143.t1 AT2G24840 35.616 146 82 3 4 137 72 217 1.28e-20 85.5
MS.gene023143.t1 AT3G66656 54.054 74 34 0 1 74 8 81 8.47e-20 81.6
MS.gene023143.t1 AT1G28460 44.954 109 57 3 9 117 22 127 5.52e-19 79.7
MS.gene023143.t1 AT1G29962 41.964 112 59 4 10 118 23 131 1.64e-17 75.9
MS.gene023143.t1 AT2G45660 30.000 130 85 1 1 130 8 131 2.37e-17 74.7
MS.gene023143.t1 AT2G45660 30.000 130 85 1 1 130 8 131 7.63e-17 74.7
MS.gene023143.t1 AT4G24540 35.115 131 65 5 4 127 11 128 3.27e-16 73.2
MS.gene023143.t1 AT3G57230 36.607 112 54 2 4 99 11 121 4.32e-16 71.2
MS.gene023143.t1 AT4G09960 34.746 118 60 2 4 104 12 129 1.37e-15 71.6
MS.gene023143.t1 AT4G09960 34.746 118 60 2 4 104 11 128 1.40e-15 71.6
MS.gene023143.t1 AT4G09960 34.746 118 60 2 4 104 11 128 1.64e-15 71.2
MS.gene023143.t1 AT4G09960 34.746 118 60 2 4 104 21 138 1.84e-15 71.6
MS.gene023143.t1 AT3G57230 36.607 112 54 2 4 99 11 121 2.19e-15 71.2
MS.gene023143.t1 AT3G57230 36.607 112 54 2 4 99 11 121 2.19e-15 71.2
MS.gene023143.t1 AT4G09960 34.746 118 60 2 4 104 106 223 2.50e-15 72.0
MS.gene023143.t1 AT4G09960 34.746 118 60 2 4 104 37 154 2.77e-15 71.2
MS.gene023143.t1 AT4G22950 36.538 104 59 1 1 104 8 104 3.19e-15 69.7
MS.gene023143.t1 AT5G60440 40.708 113 62 2 1 108 13 125 6.64e-15 70.9
MS.gene023143.t1 AT1G01530 38.938 113 58 3 1 108 11 117 1.60e-14 68.9
MS.gene023143.t1 AT4G22950 36.538 104 59 1 1 104 8 104 1.81e-14 68.6
MS.gene023143.t1 AT4G22950 36.538 104 59 1 1 104 8 104 1.81e-14 68.6
MS.gene023143.t1 AT1G65360 33.636 110 52 2 12 112 24 121 5.66e-14 67.4
MS.gene023143.t1 AT5G62165 28.571 133 85 2 1 131 8 132 6.04e-14 65.9
MS.gene023143.t1 AT5G62165 28.571 133 85 2 1 131 8 132 6.04e-14 65.9
MS.gene023143.t1 AT5G62165 28.571 133 85 2 1 131 8 132 6.04e-14 65.9
MS.gene023143.t1 AT5G62165 28.571 133 85 2 1 131 8 132 6.04e-14 65.9
MS.gene023143.t1 AT5G62165 28.571 133 85 2 1 131 8 132 6.04e-14 65.9
MS.gene023143.t1 AT5G62165 28.058 139 90 2 1 137 8 138 1.01e-13 65.1
MS.gene023143.t1 AT5G62165 28.058 139 90 2 1 137 8 138 1.01e-13 65.1
MS.gene023143.t1 AT5G62165 28.058 139 90 2 1 137 8 138 1.01e-13 65.1
MS.gene023143.t1 AT1G28450 39.640 111 61 4 10 117 23 130 1.15e-13 65.9
MS.gene023143.t1 AT2G22540 31.098 164 89 6 4 155 11 162 1.96e-13 65.9
MS.gene023143.t1 AT2G22540 31.098 164 89 6 4 155 11 162 1.96e-13 65.9
MS.gene023143.t1 AT5G62165 28.058 139 90 2 1 137 8 138 3.30e-13 64.7
MS.gene023143.t1 AT5G62165 28.058 139 90 2 1 137 8 138 3.30e-13 64.7
MS.gene023143.t1 AT4G37940 30.081 123 79 2 1 123 8 123 4.39e-13 63.9
MS.gene023143.t1 AT5G62165 28.058 139 90 2 1 137 8 138 4.42e-13 64.7
MS.gene023143.t1 AT5G62165 28.058 139 90 2 1 137 8 138 4.42e-13 64.7
MS.gene023143.t1 AT5G62165 28.058 139 90 2 1 137 8 138 4.42e-13 64.7
MS.gene023143.t1 AT1G69120 33.621 116 67 4 4 118 11 117 4.87e-13 64.7
MS.gene023143.t1 AT4G37940 31.667 120 66 3 1 104 8 127 5.02e-13 64.7
MS.gene023143.t1 AT4G37940 30.081 123 79 2 1 123 8 123 5.40e-13 64.3
MS.gene023143.t1 AT1G69120 33.621 116 67 4 4 118 11 117 7.54e-13 64.7
MS.gene023143.t1 AT2G14210 46.667 60 31 1 4 62 11 70 7.78e-13 64.3
MS.gene023143.t1 AT5G62165 41.935 62 36 0 1 62 8 69 7.81e-13 61.6
MS.gene023143.t1 AT2G14210 46.667 60 31 1 4 62 11 70 8.46e-13 64.3
MS.gene023143.t1 AT5G51870 44.068 59 33 0 4 62 11 69 1.04e-12 62.8
MS.gene023143.t1 AT5G51870 44.068 59 33 0 4 62 11 69 1.06e-12 63.5
MS.gene023143.t1 AT5G51860 29.630 135 83 3 4 134 11 137 1.21e-12 63.5
MS.gene023143.t1 AT5G51860 29.630 135 83 3 4 134 11 137 1.25e-12 63.2
MS.gene023143.t1 AT5G51870 44.068 59 33 0 4 62 34 92 1.48e-12 62.8
MS.gene023143.t1 AT1G47760 28.302 159 88 4 1 148 8 151 1.54e-12 62.8
MS.gene023143.t1 AT5G51870 44.068 59 33 0 4 62 11 69 1.80e-12 63.2
MS.gene023143.t1 AT5G51870 44.068 59 33 0 4 62 21 79 2.40e-12 62.8
MS.gene023143.t1 AT3G58780 29.457 129 83 2 4 131 26 147 6.98e-12 62.0
MS.gene023143.t1 AT1G26310 30.000 130 84 3 4 131 11 135 7.29e-12 62.0
MS.gene023143.t1 AT3G58780 29.457 129 83 2 4 131 32 153 7.91e-12 61.6
MS.gene023143.t1 AT4G11880 33.333 105 62 2 1 104 8 105 8.05e-12 60.5
MS.gene023143.t1 AT4G11880 33.333 105 62 2 1 104 8 105 8.05e-12 60.5
MS.gene023143.t1 AT3G58780 29.457 129 83 2 4 131 26 147 8.27e-12 62.0
MS.gene023143.t1 AT2G42830 28.682 129 84 2 4 131 26 147 8.73e-12 61.6
MS.gene023143.t1 AT2G42830 28.682 129 84 2 4 131 26 147 9.07e-12 61.6
MS.gene023143.t1 AT1G72350 51.852 54 24 1 10 63 58 109 9.60e-12 61.2
MS.gene023143.t1 AT4G11880 33.333 105 62 2 1 104 8 105 1.45e-11 60.5
MS.gene023143.t1 AT4G11880 33.333 105 62 2 1 104 8 105 1.45e-11 60.5
MS.gene023143.t1 AT2G45650 43.548 62 35 0 1 62 8 69 1.70e-11 60.8
MS.gene023143.t1 AT2G22630 26.562 128 87 2 4 131 11 131 1.83e-11 60.5
MS.gene023143.t1 AT2G22630 26.562 128 87 2 4 131 11 131 1.83e-11 60.5
MS.gene023143.t1 AT5G13790 33.333 93 59 1 4 96 11 100 2.03e-11 60.8
MS.gene023143.t1 AT3G57390 29.252 147 96 3 4 145 11 154 2.13e-11 60.1
MS.gene023143.t1 AT3G04100 30.392 102 69 1 1 100 20 121 2.19e-11 60.1
MS.gene023143.t1 AT3G57390 29.252 147 96 3 4 145 11 154 2.99e-11 60.1
MS.gene023143.t1 AT5G13790 44.068 59 33 0 4 62 11 69 3.05e-11 60.1
MS.gene023143.t1 AT4G36590 35.714 98 59 1 1 94 13 110 4.67e-11 59.7
MS.gene023143.t1 AT1G54760 35.065 77 48 1 25 101 18 92 5.91e-11 58.2
MS.gene023143.t1 AT1G71692 34.615 104 59 3 4 98 11 114 6.58e-11 58.5
MS.gene023143.t1 AT2G22540 55.556 45 20 0 4 48 11 55 8.14e-11 58.9
MS.gene023143.t1 AT3G30260 28.244 131 81 4 4 130 11 132 9.20e-11 58.9

Find 31 sgRNAs with CRISPR-Local

Find 34 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAGCCACAGTTTGAAAATT+TGG 0.162957 4.3:+18974535 None:intergenic
TTGTTCATCATGTTGATATT+TGG 0.210857 4.3:+18974442 None:intergenic
CTCCACCTTCTTCAACTCTT+TGG 0.225832 4.3:+18974402 None:intergenic
GCCTATACGCATCATTGATT+TGG 0.291073 4.3:-18974245 MS.gene023143:CDS
AGTGGTAATCCATTTGCTTT+TGG 0.324426 4.3:-18974562 MS.gene023143:CDS
TAAGATCAGCAAGTGCAATA+TGG 0.330254 4.3:+18974359 None:intergenic
AAAGCTAGAGTTGGTATAGT+TGG 0.376951 4.3:-18974595 MS.gene023143:CDS
AGATGGAACTTGTGAAGAAC+AGG 0.420903 4.3:-18974693 MS.gene023143:CDS
TTGATTTGGTTTGTAAAAGA+AGG 0.423169 4.3:-18974231 MS.gene023143:CDS
CTGATTCTTGTCCTTCATGA+AGG 0.455174 4.3:+18974506 None:intergenic
TTTGGAGTACCAAAAGCAAA+TGG 0.462718 4.3:+18974553 None:intergenic
ACCAAATCAATGATGCGTAT+AGG 0.468968 4.3:+18974244 None:intergenic
AAGATCAGCAAGTGCAATAT+GGG 0.472247 4.3:+18974360 None:intergenic
ATTCTTTGTAAAGCTAGAGT+TGG 0.512424 4.3:-18974604 MS.gene023143:CDS
TTGTGAAGAACAGGAGTGCT+AGG 0.529512 4.3:-18974684 MS.gene023143:CDS
AAGCAAATGGATTACCACTT+GGG 0.543871 4.3:+18974566 None:intergenic
AAGGTGGAGGAAGTTAAGAA+AGG 0.546878 4.3:-18974388 MS.gene023143:CDS
GAAGGACAAGAATCAGAAGC+TGG 0.549251 4.3:-18974499 MS.gene023143:CDS
AAAAGAACTTCTAAAAGTGA+AGG 0.559771 4.3:-18974332 MS.gene023143:CDS
AAAGCAAATGGATTACCACT+TGG 0.562709 4.3:+18974565 None:intergenic
TTTAACCAAAGAGTTGAAGA+AGG 0.565193 4.3:-18974407 MS.gene023143:CDS
CAAAGAGTTGAAGAAGGTGG+AGG 0.587290 4.3:-18974401 MS.gene023143:CDS
AATCAGAAGCTGGATCATCA+AGG 0.592352 4.3:-18974489 MS.gene023143:CDS
GCTTCGCTGAAAGAGCTCCA+TGG 0.609990 4.3:-18974310 MS.gene023143:CDS
ATAGTTGGATTTACCCCAAG+TGG 0.610668 4.3:-18974580 MS.gene023143:CDS
AACCAAAGAGTTGAAGAAGG+TGG 0.610693 4.3:-18974404 MS.gene023143:CDS
AGCAAATGGATTACCACTTG+GGG 0.611363 4.3:+18974567 None:intergenic
GCTGAACAATACCTTCATGA+AGG 0.624239 4.3:-18974517 MS.gene023143:CDS
ATGATGAACAAAGAATTGAG+TGG 0.675457 4.3:-18974430 MS.gene023143:CDS
ATGCTGCCTCGATGTCACCA+TGG 0.676966 4.3:+18974293 None:intergenic
AGAGCTCCATGGTGACATCG+AGG 0.706026 4.3:-18974299 MS.gene023143:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! TTGTTCATCATGTTGATATT+TGG + chr4.3:18974480-18974499 None:intergenic 25.0%
!! AAAAGAACTTCTAAAAGTGA+AGG - chr4.3:18974587-18974606 MS.gene023143:CDS 25.0%
!! TTGATATTTGGATTTTCAGA+GGG + chr4.3:18974468-18974487 None:intergenic 25.0%
!!! TTGATTTGGTTTGTAAAAGA+AGG - chr4.3:18974688-18974707 MS.gene023143:CDS 25.0%
ATGATGAACAAAGAATTGAG+TGG - chr4.3:18974489-18974508 MS.gene023143:CDS 30.0%
ATTCTTTGTAAAGCTAGAGT+TGG - chr4.3:18974315-18974334 MS.gene023143:CDS 30.0%
TTTAACCAAAGAGTTGAAGA+AGG - chr4.3:18974512-18974531 MS.gene023143:CDS 30.0%
! ACGTTTTCAAAAAGAAAGAG+TGG - chr4.3:18974264-18974283 MS.gene023143:CDS 30.0%
! GTTGATATTTGGATTTTCAG+AGG + chr4.3:18974469-18974488 None:intergenic 30.0%
! TACTCCAAATTTTCAAACTG+TGG - chr4.3:18974380-18974399 MS.gene023143:CDS 30.0%
AAGATCAGCAAGTGCAATAT+GGG + chr4.3:18974562-18974581 None:intergenic 35.0%
ACCAAATCAATGATGCGTAT+AGG + chr4.3:18974678-18974697 None:intergenic 35.0%
TAAGATCAGCAAGTGCAATA+TGG + chr4.3:18974563-18974582 None:intergenic 35.0%
TCAGCCACAGTTTGAAAATT+TGG + chr4.3:18974387-18974406 None:intergenic 35.0%
! AGTGGTAATCCATTTGCTTT+TGG - chr4.3:18974357-18974376 MS.gene023143:CDS 35.0%
! TTTGGAGTACCAAAAGCAAA+TGG + chr4.3:18974369-18974388 None:intergenic 35.0%
!! AAAGCAAATGGATTACCACT+TGG + chr4.3:18974357-18974376 None:intergenic 35.0%
!! AAAGCTAGAGTTGGTATAGT+TGG - chr4.3:18974324-18974343 MS.gene023143:CDS 35.0%
!! AAGCAAATGGATTACCACTT+GGG + chr4.3:18974356-18974375 None:intergenic 35.0%
AACCAAAGAGTTGAAGAAGG+TGG - chr4.3:18974515-18974534 MS.gene023143:CDS 40.0%
AAGGTGGAGGAAGTTAAGAA+AGG - chr4.3:18974531-18974550 MS.gene023143:CDS 40.0%
AATCAGAAGCTGGATCATCA+AGG - chr4.3:18974430-18974449 MS.gene023143:CDS 40.0%
ATAGTTGGATTTACCCCAAG+TGG - chr4.3:18974339-18974358 MS.gene023143:CDS 40.0%
CTGATTCTTGTCCTTCATGA+AGG + chr4.3:18974416-18974435 None:intergenic 40.0%
GCTGAACAATACCTTCATGA+AGG - chr4.3:18974402-18974421 MS.gene023143:CDS 40.0%
! GCCTATACGCATCATTGATT+TGG - chr4.3:18974674-18974693 MS.gene023143:CDS 40.0%
!! AGCAAATGGATTACCACTTG+GGG + chr4.3:18974355-18974374 None:intergenic 40.0%
CAAAGAGTTGAAGAAGGTGG+AGG - chr4.3:18974518-18974537 MS.gene023143:CDS 45.0%
CTCCACCTTCTTCAACTCTT+TGG + chr4.3:18974520-18974539 None:intergenic 45.0%
GAAGGACAAGAATCAGAAGC+TGG - chr4.3:18974420-18974439 MS.gene023143:CDS 45.0%
!! TTGTGAAGAACAGGAGTGCT+AGG - chr4.3:18974235-18974254 MS.gene023143:CDS 45.0%
AGAGCTCCATGGTGACATCG+AGG - chr4.3:18974620-18974639 MS.gene023143:CDS 55.0%
ATGCTGCCTCGATGTCACCA+TGG + chr4.3:18974629-18974648 None:intergenic 55.0%
GCTTCGCTGAAAGAGCTCCA+TGG - chr4.3:18974609-18974628 MS.gene023143:CDS 55.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 18974228 18974713 18974228 ID=MS.gene023143
chr4.3 mRNA 18974228 18974713 18974228 ID=MS.gene023143.t1;Parent=MS.gene023143
chr4.3 exon 18974228 18974713 18974228 ID=MS.gene023143.t1.exon1;Parent=MS.gene023143.t1
chr4.3 CDS 18974228 18974713 18974228 ID=cds.MS.gene023143.t1;Parent=MS.gene023143.t1
Gene Sequence

>MS.gene023143

ATGGAACTTGTGAAGAACAGGAGTGCTAGGTATGTCACGTTTTCAAAAAGAAAGAGTGGTCTTTTTAAAAAAGCAAGTGAATTATCAATTCTTTGTAAAGCTAGAGTTGGTATAGTTGGATTTACCCCAAGTGGTAATCCATTTGCTTTTGGTACTCCAAATTTTCAAACTGTGGCTGAACAATACCTTCATGAAGGACAAGAATCAGAAGCTGGATCATCAAGGCAAATTGTTACACCCTCTGAAAATCCAAATATCAACATGATGAACAAAGAATTGAGTGGTTTAACCAAAGAGTTGAAGAAGGTGGAGGAAGTTAAGAAAGGTAAAGCCCATATTGCACTTGCTGATCTTAACTTAAAAGAACTTCTAAAAGTGAAGGCTTCGCTGAAAGAGCTCCATGGTGACATCGAGGCAGCATCTTCTTTGCTTCTTCTTTCAAAGAAGCCTATACGCATCATTGATTTGGTTTGTAAAAGAAGGTGA
Protein sequence

>MS.gene023143.t1

MELVKNRSARYVTFSKRKSGLFKKASELSILCKARVGIVGFTPSGNPFAFGTPNFQTVAEQYLHEGQESEAGSSRQIVTPSENPNINMMNKELSGLTKELKKVEEVKKGKAHIALADLNLKELLKVKASLKELHGDIEAASSLLLLSKKPIRIIDLVCKRR