Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023245.t1 | RHN42300.1 | 96 | 404 | 14 | 1 | 1 | 404 | 1 | 402 | 1.80E-209 | 738.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023245.t1 | Q9ZUM9 | 56.0 | 405 | 148 | 9 | 2 | 390 | 7 | 397 | 2.0e-105 | 384.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023245.t1 | A0A396GMN6 | 96.0 | 404 | 14 | 1 | 1 | 404 | 1 | 402 | 1.3e-209 | 738.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene023245.t1 | TR | SET |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023245.t1 | MTR_5g027020 | 48.586 | 389 | 151 | 9 | 5 | 385 | 7 | 354 | 1.70e-123 | 362 |
| MS.gene023245.t1 | MTR_1g038390 | 62.222 | 135 | 38 | 4 | 213 | 346 | 4 | 126 | 1.32e-40 | 140 |
| MS.gene023245.t1 | MTR_3g073000 | 25.298 | 336 | 199 | 11 | 8 | 328 | 13 | 311 | 2.64e-18 | 86.3 |
| MS.gene023245.t1 | MTR_3g073000 | 25.298 | 336 | 199 | 11 | 8 | 328 | 13 | 311 | 3.62e-18 | 86.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023245.t1 | AT2G19640 | 53.186 | 408 | 155 | 10 | 2 | 390 | 7 | 397 | 6.95e-137 | 397 |
| MS.gene023245.t1 | AT2G19640 | 55.591 | 313 | 110 | 8 | 2 | 299 | 7 | 305 | 1.08e-110 | 328 |
| MS.gene023245.t1 | AT2G17900 | 25.589 | 297 | 174 | 11 | 8 | 291 | 18 | 280 | 3.28e-15 | 77.8 |
Find 73 sgRNAs with CRISPR-Local
Find 94 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGAAGAGTGATGAGAAAA+AGG | 0.178869 | 4.3:+17831473 | None:intergenic |
| AAAGATAAGCTTAATGCTTT+TGG | 0.201202 | 4.3:-17831065 | MS.gene023245:CDS |
| GGAGAATGAAGAAGAGGATA+TGG | 0.278011 | 4.3:-17830685 | MS.gene023245:CDS |
| AATAGGTCTGTTAGAGCTTA+TGG | 0.303956 | 4.3:-17831011 | MS.gene023245:CDS |
| TTTGCTGCTTCATCATTATC+AGG | 0.305057 | 4.3:+17831173 | None:intergenic |
| TCTCTGAAACTGATGAAAAT+AGG | 0.345771 | 4.3:-17831028 | MS.gene023245:CDS |
| GGAGGAGCAATGTGAAAATA+TGG | 0.349748 | 4.3:-17830637 | MS.gene023245:CDS |
| AAGAGATTGTTGGAAGACTA+TGG | 0.351805 | 4.3:-17830783 | MS.gene023245:CDS |
| AACGAAAACAATTCATTATG+AGG | 0.359381 | 4.3:+17831113 | None:intergenic |
| GGATGATGAGGAGGAGGAGG+AGG | 0.368656 | 4.3:-17830658 | MS.gene023245:CDS |
| TTGAATTGCAAAATCGATAT+CGG | 0.369503 | 4.3:+17831390 | None:intergenic |
| GAAGCAAAAGAGGATTGCTT+TGG | 0.410291 | 4.3:+17831303 | None:intergenic |
| TAATCAAATCTACACGCATT+AGG | 0.416714 | 4.3:+17830948 | None:intergenic |
| GATGTAATGTTGAATCGAAT+TGG | 0.426944 | 4.3:-17830740 | MS.gene023245:CDS |
| GAAATTCAAGGTAGAGGAAG+AGG | 0.427064 | 4.3:-17831572 | MS.gene023245:CDS |
| TCTACCTTCAAAACAGAACT+TGG | 0.428323 | 4.3:+17831596 | None:intergenic |
| TAACAAAACTTGAAAATTTG+AGG | 0.434129 | 4.3:+17831211 | None:intergenic |
| ACTTGAATGTTGATGATAAA+GGG | 0.440641 | 4.3:-17830443 | MS.gene023245:CDS |
| TATGGATGATGAGGAGGAGG+AGG | 0.450793 | 4.3:-17830661 | MS.gene023245:CDS |
| GACTTGAATGTTGATGATAA+AGG | 0.457168 | 4.3:-17830444 | MS.gene023245:CDS |
| AGACCGGCCGCGACATCATA+AGG | 0.460613 | 4.3:+17830909 | None:intergenic |
| GTATCACCTTGTGGCGGTAA+AGG | 0.461262 | 4.3:+17830522 | None:intergenic |
| TGCTTGAAGTTGTCTTTCGA+GGG | 0.463012 | 4.3:+17831274 | None:intergenic |
| TTAATGAAAACTATTCTAGT+AGG | 0.465091 | 4.3:-17830809 | MS.gene023245:CDS |
| AACAAAACTTGAAAATTTGA+GGG | 0.484733 | 4.3:+17831212 | None:intergenic |
| GGCTATGGATGATGAGGAGG+AGG | 0.485383 | 4.3:-17830664 | MS.gene023245:CDS |
| GTGCTTGAAGTTGTCTTTCG+AGG | 0.486050 | 4.3:+17831273 | None:intergenic |
| AGGGGTTGTTGAAGCAAAAG+AGG | 0.497882 | 4.3:+17831293 | None:intergenic |
| TAGTAGGCAGAAGAGATTGT+TGG | 0.499496 | 4.3:-17830793 | MS.gene023245:CDS |
| GTAGAGGAAATTCAAGGTAG+AGG | 0.507246 | 4.3:-17831578 | MS.gene023245:CDS |
| TTGAAGGTAGAGGAAATTCA+AGG | 0.513971 | 4.3:-17831584 | MS.gene023245:CDS |
| AAAATCAGTATTACTAAGAC+CGG | 0.525101 | 4.3:+17830893 | None:intergenic |
| TCTGATAATGAGAGTGTTGA+AGG | 0.527867 | 4.3:-17830717 | MS.gene023245:CDS |
| GCATCTCAACCTCTCAAAGC+TGG | 0.531187 | 4.3:-17831542 | MS.gene023245:CDS |
| ACAAAACTTGAAAATTTGAG+GGG | 0.531312 | 4.3:+17831213 | None:intergenic |
| GTGGTAGGGTAAAGGAGGAT+TGG | 0.532177 | 4.3:+17831497 | None:intergenic |
| TGAAGAAGAGGATATGGCTA+TGG | 0.532611 | 4.3:-17830679 | MS.gene023245:CDS |
| CCACCTTATGATGTCGCGGC+CGG | 0.533777 | 4.3:-17830912 | MS.gene023245:CDS |
| TGTGTGATAGAACAAATTGC+TGG | 0.536848 | 4.3:-17830557 | MS.gene023245:CDS |
| TGTGGAGGAGAATGAAGAAG+AGG | 0.542011 | 4.3:-17830691 | MS.gene023245:CDS |
| TCGTTATTGTCAGTTTCTGA+TGG | 0.542245 | 4.3:+17830612 | None:intergenic |
| GGATATGGCTATGGATGATG+AGG | 0.556063 | 4.3:-17830670 | MS.gene023245:CDS |
| GGGATGCAATAATGTGGTGT+AGG | 0.556795 | 4.3:+17831147 | None:intergenic |
| TGATACATTATCTAATGTCA+TGG | 0.566313 | 4.3:-17830505 | MS.gene023245:CDS |
| ACGCATTAGGAAGACAATCA+TGG | 0.569579 | 4.3:+17830961 | None:intergenic |
| TCATGATGTTCCACAAGGTA+GGG | 0.572819 | 4.3:-17830856 | MS.gene023245:CDS |
| TATGGCTATGGATGATGAGG+AGG | 0.579991 | 4.3:-17830667 | MS.gene023245:CDS |
| ACGAAAACAATTCATTATGA+GGG | 0.582255 | 4.3:+17831114 | None:intergenic |
| TGAGAGTGTTGAAGGAAATG+TGG | 0.582356 | 4.3:-17830709 | MS.gene023245:CDS |
| GTTGATGATAAAGGGCAAAG+TGG | 0.587949 | 4.3:-17830435 | MS.gene023245:CDS |
| ATGATTTGACCAGCTTTGAG+AGG | 0.589051 | 4.3:+17831533 | None:intergenic |
| AAGGGGTGGTAGGGTAAAGG+AGG | 0.590878 | 4.3:+17831492 | None:intergenic |
| GTGTGATAGAACAAATTGCT+GGG | 0.601867 | 4.3:-17830556 | MS.gene023245:CDS |
| AAACAAATCTCCCTACCTTG+TGG | 0.609840 | 4.3:+17830846 | None:intergenic |
| TCAACTCATCACATTCCACA+TGG | 0.627136 | 4.3:-17831349 | MS.gene023245:CDS |
| TTAGCTCCTTTACCGCCACA+AGG | 0.628714 | 4.3:-17830528 | MS.gene023245:CDS |
| TCATGGAATGTAATGTCTGT+GGG | 0.630100 | 4.3:-17830488 | MS.gene023245:CDS |
| TTAGATAATGTATCACCTTG+TGG | 0.636379 | 4.3:+17830513 | None:intergenic |
| GTCATGGAATGTAATGTCTG+TGG | 0.637762 | 4.3:-17830489 | MS.gene023245:CDS |
| TTCATGATGTTCCACAAGGT+AGG | 0.641511 | 4.3:-17830857 | MS.gene023245:CDS |
| GCTTGAAGTTGTCTTTCGAG+GGG | 0.645950 | 4.3:+17831275 | None:intergenic |
| GCAAAGTGGAGAAGTTCACA+TGG | 0.648528 | 4.3:-17830421 | MS.gene023245:CDS |
| TAATCCACCTTATGATGTCG+CGG | 0.663274 | 4.3:-17830916 | MS.gene023245:CDS |
| GAGTGTTGAAGGAAATGTGG+AGG | 0.667098 | 4.3:-17830706 | MS.gene023245:CDS |
| CAACTCATCACATTCCACAT+GGG | 0.668131 | 4.3:-17831348 | MS.gene023245:CDS |
| CAAAACTTGAAAATTTGAGG+GGG | 0.669304 | 4.3:+17831214 | None:intergenic |
| TAATGCTTGACAAACCCATG+TGG | 0.692539 | 4.3:+17831334 | None:intergenic |
| GGAGGATTGGTGAATCTGTG+AGG | 0.693945 | 4.3:+17831510 | None:intergenic |
| ATGATTCATGATGTTCCACA+AGG | 0.697653 | 4.3:-17830861 | MS.gene023245:CDS |
| CCGGCCGCGACATCATAAGG+TGG | 0.702146 | 4.3:+17830912 | None:intergenic |
| GATAATGTATCACCTTGTGG+CGG | 0.702824 | 4.3:+17830516 | None:intergenic |
| TGTGATAGAACAAATTGCTG+GGG | 0.747351 | 4.3:-17830555 | MS.gene023245:CDS |
| AAGTGGAGAAGTTCACATGG+AGG | 0.760776 | 4.3:-17830418 | MS.gene023245:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACAAAACTTGAAAATTTGA+GGG | + | chr4.3:17830809-17830828 | None:intergenic | 20.0% |
| !! | TAACAAAACTTGAAAATTTG+AGG | + | chr4.3:17830810-17830829 | None:intergenic | 20.0% |
| !! | TTAATGAAAACTATTCTAGT+AGG | - | chr4.3:17831209-17831228 | MS.gene023245:CDS | 20.0% |
| !!! | GTAATACTGATTTTGTTATT+AGG | - | chr4.3:17831134-17831153 | MS.gene023245:CDS | 20.0% |
| ! | AAAATCAGTATTACTAAGAC+CGG | + | chr4.3:17831128-17831147 | None:intergenic | 25.0% |
| ! | AACGAAAACAATTCATTATG+AGG | + | chr4.3:17830908-17830927 | None:intergenic | 25.0% |
| ! | ACAAAACTTGAAAATTTGAG+GGG | + | chr4.3:17830808-17830827 | None:intergenic | 25.0% |
| ! | ACGAAAACAATTCATTATGA+GGG | + | chr4.3:17830907-17830926 | None:intergenic | 25.0% |
| ! | TCAAAAAGAAATAAGCATGT+GGG | + | chr4.3:17831435-17831454 | None:intergenic | 25.0% |
| ! | TGATACATTATCTAATGTCA+TGG | - | chr4.3:17831513-17831532 | MS.gene023245:CDS | 25.0% |
| ! | TTCAAAAAGAAATAAGCATG+TGG | + | chr4.3:17831436-17831455 | None:intergenic | 25.0% |
| ! | TTGAATTGCAAAATCGATAT+CGG | + | chr4.3:17830631-17830650 | None:intergenic | 25.0% |
| !! | AAAGATAAGCTTAATGCTTT+TGG | - | chr4.3:17830953-17830972 | MS.gene023245:CDS | 25.0% |
| !! | CTAGAATAGTTTTCATTAAC+AGG | + | chr4.3:17831208-17831227 | None:intergenic | 25.0% |
| !!! | ACTTGAATGTTGATGATAAA+GGG | - | chr4.3:17831575-17831594 | MS.gene023245:CDS | 25.0% |
| AAAAAAGGGATGCAATAATG+TGG | + | chr4.3:17830880-17830899 | None:intergenic | 30.0% | |
| AAAGAAGAGTGATGAGAAAA+AGG | + | chr4.3:17830548-17830567 | None:intergenic | 30.0% | |
| AAGAAGAGTGATGAGAAAAA+GGG | + | chr4.3:17830547-17830566 | None:intergenic | 30.0% | |
| CAAAACTTGAAAATTTGAGG+GGG | + | chr4.3:17830807-17830826 | None:intergenic | 30.0% | |
| GATGTAATGTTGAATCGAAT+TGG | - | chr4.3:17831278-17831297 | MS.gene023245:CDS | 30.0% | |
| TAATCAAATCTACACGCATT+AGG | + | chr4.3:17831073-17831092 | None:intergenic | 30.0% | |
| TTAGATAATGTATCACCTTG+TGG | + | chr4.3:17831508-17831527 | None:intergenic | 30.0% | |
| ! | TTTTCATCAGTTTCAGAGAA+AGG | + | chr4.3:17830989-17831008 | None:intergenic | 30.0% |
| !! | GACTTGAATGTTGATGATAA+AGG | - | chr4.3:17831574-17831593 | MS.gene023245:CDS | 30.0% |
| !! | TCTCTGAAACTGATGAAAAT+AGG | - | chr4.3:17830990-17831009 | MS.gene023245:CDS | 30.0% |
| !!! | CAAGTTTTGTTATCTCTACA+AGG | - | chr4.3:17830818-17830837 | MS.gene023245:CDS | 30.0% |
| AAGAGATTGTTGGAAGACTA+TGG | - | chr4.3:17831235-17831254 | MS.gene023245:CDS | 35.0% | |
| AATAGGTCTGTTAGAGCTTA+TGG | - | chr4.3:17831007-17831026 | MS.gene023245:CDS | 35.0% | |
| AGAAGAGTGATGAGAAAAAG+GGG | + | chr4.3:17830546-17830565 | None:intergenic | 35.0% | |
| ATGATTCATGATGTTCCACA+AGG | - | chr4.3:17831157-17831176 | MS.gene023245:CDS | 35.0% | |
| GGTTGAAAAACGAAGCATAA+GGG | + | chr4.3:17831039-17831058 | None:intergenic | 35.0% | |
| GTGTGATAGAACAAATTGCT+GGG | - | chr4.3:17831462-17831481 | MS.gene023245:CDS | 35.0% | |
| TCATGGAATGTAATGTCTGT+GGG | - | chr4.3:17831530-17831549 | MS.gene023245:CDS | 35.0% | |
| TCGTTATTGTCAGTTTCTGA+TGG | + | chr4.3:17831409-17831428 | None:intergenic | 35.0% | |
| TCTACCTTCAAAACAGAACT+TGG | + | chr4.3:17830425-17830444 | None:intergenic | 35.0% | |
| TGGTTGAAAAACGAAGCATA+AGG | + | chr4.3:17831040-17831059 | None:intergenic | 35.0% | |
| TGTGATAGAACAAATTGCTG+GGG | - | chr4.3:17831463-17831482 | MS.gene023245:CDS | 35.0% | |
| TGTGTGATAGAACAAATTGC+TGG | - | chr4.3:17831461-17831480 | MS.gene023245:CDS | 35.0% | |
| TTGAAGGTAGAGGAAATTCA+AGG | - | chr4.3:17830434-17830453 | MS.gene023245:CDS | 35.0% | |
| ! | ATTATGAGGGTGCGAAAAAA+GGG | + | chr4.3:17830894-17830913 | None:intergenic | 35.0% |
| ! | TTTGCTGCTTCATCATTATC+AGG | + | chr4.3:17830848-17830867 | None:intergenic | 35.0% |
| !! | TCTGATAATGAGAGTGTTGA+AGG | - | chr4.3:17831301-17831320 | MS.gene023245:CDS | 35.0% |
| !! | TGTTCCAAGTTCTGTTTTGA+AGG | - | chr4.3:17830418-17830437 | MS.gene023245:CDS | 35.0% |
| !!! | AAGTTCTGTTTTGAAGGTAG+AGG | - | chr4.3:17830424-17830443 | MS.gene023245:CDS | 35.0% |
| AAACAAATCTCCCTACCTTG+TGG | + | chr4.3:17831175-17831194 | None:intergenic | 40.0% | |
| AACTTGAAAATTTGAGGGGG+CGG | + | chr4.3:17830804-17830823 | None:intergenic | 40.0% | |
| ACGCATTAGGAAGACAATCA+TGG | + | chr4.3:17831060-17831079 | None:intergenic | 40.0% | |
| CAACTCATCACATTCCACAT+GGG | - | chr4.3:17830670-17830689 | MS.gene023245:CDS | 40.0% | |
| GAAATTCAAGGTAGAGGAAG+AGG | - | chr4.3:17830446-17830465 | MS.gene023245:CDS | 40.0% | |
| GAAGCAAAAGAGGATTGCTT+TGG | + | chr4.3:17830718-17830737 | None:intergenic | 40.0% | |
| GATAATGTATCACCTTGTGG+CGG | + | chr4.3:17831505-17831524 | None:intergenic | 40.0% | |
| GGAGAATGAAGAAGAGGATA+TGG | - | chr4.3:17831333-17831352 | MS.gene023245:CDS | 40.0% | |
| GGAGGAGCAATGTGAAAATA+TGG | - | chr4.3:17831381-17831400 | MS.gene023245:CDS | 40.0% | |
| GTAGAGGAAATTCAAGGTAG+AGG | - | chr4.3:17830440-17830459 | MS.gene023245:CDS | 40.0% | |
| GTCATGGAATGTAATGTCTG+TGG | - | chr4.3:17831529-17831548 | MS.gene023245:CDS | 40.0% | |
| TAATCCACCTTATGATGTCG+CGG | - | chr4.3:17831102-17831121 | MS.gene023245:CDS | 40.0% | |
| TAATGCTTGACAAACCCATG+TGG | + | chr4.3:17830687-17830706 | None:intergenic | 40.0% | |
| TAGTAGGCAGAAGAGATTGT+TGG | - | chr4.3:17831225-17831244 | MS.gene023245:CDS | 40.0% | |
| TCAACTCATCACATTCCACA+TGG | - | chr4.3:17830669-17830688 | MS.gene023245:CDS | 40.0% | |
| TCATGATGTTCCACAAGGTA+GGG | - | chr4.3:17831162-17831181 | MS.gene023245:CDS | 40.0% | |
| TGAAGAAGAGGATATGGCTA+TGG | - | chr4.3:17831339-17831358 | MS.gene023245:CDS | 40.0% | |
| TGCTTGAAGTTGTCTTTCGA+GGG | + | chr4.3:17830747-17830766 | None:intergenic | 40.0% | |
| TTCATGATGTTCCACAAGGT+AGG | - | chr4.3:17831161-17831180 | MS.gene023245:CDS | 40.0% | |
| ! | CATTATGAGGGTGCGAAAAA+AGG | + | chr4.3:17830895-17830914 | None:intergenic | 40.0% |
| !! | ATGATTTGACCAGCTTTGAG+AGG | + | chr4.3:17830488-17830507 | None:intergenic | 40.0% |
| !! | GTTGATGATAAAGGGCAAAG+TGG | - | chr4.3:17831583-17831602 | MS.gene023245:CDS | 40.0% |
| !! | TGAGAGTGTTGAAGGAAATG+TGG | - | chr4.3:17831309-17831328 | MS.gene023245:CDS | 40.0% |
| AAAAAGGGGTGGTAGGGTAA+AGG | + | chr4.3:17830532-17830551 | None:intergenic | 45.0% | |
| AAGTGGAGAAGTTCACATGG+AGG | - | chr4.3:17831600-17831619 | MS.gene023245:CDS | 45.0% | |
| AGAGTGATGAGAAAAAGGGG+TGG | + | chr4.3:17830543-17830562 | None:intergenic | 45.0% | |
| AGGGGTTGTTGAAGCAAAAG+AGG | + | chr4.3:17830728-17830747 | None:intergenic | 45.0% | |
| GATGAGAAAAAGGGGTGGTA+GGG | + | chr4.3:17830538-17830557 | None:intergenic | 45.0% | |
| GCAAAGTGGAGAAGTTCACA+TGG | - | chr4.3:17831597-17831616 | MS.gene023245:CDS | 45.0% | |
| GCTTGAAGTTGTCTTTCGAG+GGG | + | chr4.3:17830746-17830765 | None:intergenic | 45.0% | |
| GGATATGGCTATGGATGATG+AGG | - | chr4.3:17831348-17831367 | MS.gene023245:CDS | 45.0% | |
| GGGATGCAATAATGTGGTGT+AGG | + | chr4.3:17830874-17830893 | None:intergenic | 45.0% | |
| GTGCTTGAAGTTGTCTTTCG+AGG | + | chr4.3:17830748-17830767 | None:intergenic | 45.0% | |
| TATGGCTATGGATGATGAGG+AGG | - | chr4.3:17831351-17831370 | MS.gene023245:CDS | 45.0% | |
| TGATGAGAAAAAGGGGTGGT+AGG | + | chr4.3:17830539-17830558 | None:intergenic | 45.0% | |
| TGTGGAGGAGAATGAAGAAG+AGG | - | chr4.3:17831327-17831346 | MS.gene023245:CDS | 45.0% | |
| !! | GAGTGTTGAAGGAAATGTGG+AGG | - | chr4.3:17831312-17831331 | MS.gene023245:CDS | 45.0% |
| GCATCTCAACCTCTCAAAGC+TGG | - | chr4.3:17830476-17830495 | MS.gene023245:CDS | 50.0% | |
| GTATCACCTTGTGGCGGTAA+AGG | + | chr4.3:17831499-17831518 | None:intergenic | 50.0% | |
| GTGGTAGGGTAAAGGAGGAT+TGG | + | chr4.3:17830524-17830543 | None:intergenic | 50.0% | |
| TATGGATGATGAGGAGGAGG+AGG | - | chr4.3:17831357-17831376 | MS.gene023245:CDS | 50.0% | |
| TTAGCTCCTTTACCGCCACA+AGG | - | chr4.3:17831490-17831509 | MS.gene023245:CDS | 50.0% | |
| ! | GGAGGATTGGTGAATCTGTG+AGG | + | chr4.3:17830511-17830530 | None:intergenic | 50.0% |
| AAGGGGTGGTAGGGTAAAGG+AGG | + | chr4.3:17830529-17830548 | None:intergenic | 55.0% | |
| GGCTATGGATGATGAGGAGG+AGG | - | chr4.3:17831354-17831373 | MS.gene023245:CDS | 55.0% | |
| AGACCGGCCGCGACATCATA+AGG | + | chr4.3:17831112-17831131 | None:intergenic | 60.0% | |
| CCACCTTATGATGTCGCGGC+CGG | - | chr4.3:17831106-17831125 | MS.gene023245:CDS | 60.0% | |
| GGATGATGAGGAGGAGGAGG+AGG | - | chr4.3:17831360-17831379 | MS.gene023245:CDS | 60.0% | |
| TGATGAGGAGGAGGAGGAGG+AGG | - | chr4.3:17831363-17831382 | MS.gene023245:CDS | 60.0% | |
| CCGGCCGCGACATCATAAGG+TGG | + | chr4.3:17831109-17831128 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 17830413 | 17831627 | 17830413 | ID=MS.gene023245 |
| chr4.3 | mRNA | 17830413 | 17831627 | 17830413 | ID=MS.gene023245.t1;Parent=MS.gene023245 |
| chr4.3 | exon | 17830413 | 17831627 | 17830413 | ID=MS.gene023245.t1.exon1;Parent=MS.gene023245.t1 |
| chr4.3 | CDS | 17830413 | 17831627 | 17830413 | ID=cds.MS.gene023245.t1;Parent=MS.gene023245.t1 |
| Gene Sequence |
| Protein sequence |
