Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02347.t1 | XP_004486316.1 | 76.6 | 728 | 131 | 7 | 1 | 705 | 129 | 840 | 0.00E+00 | 1139.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02347.t1 | Q9SSE9 | 41.8 | 768 | 333 | 16 | 10 | 695 | 155 | 890 | 3.4e-156 | 553.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02347.t1 | A0A1S2XAI5 | 76.6 | 728 | 131 | 7 | 1 | 705 | 129 | 840 | 0.0e+00 | 1139.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene02347.t1 | TR | Jumonji |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02347.t1 | MTR_2g024270 | 71.610 | 708 | 172 | 6 | 1 | 705 | 145 | 826 | 0.0 | 1012 |
MS.gene02347.t1 | MTR_2g024140 | 70.756 | 701 | 166 | 4 | 1 | 699 | 25 | 688 | 0.0 | 988 |
MS.gene02347.t1 | MTR_4g132540 | 64.730 | 740 | 195 | 11 | 1 | 702 | 159 | 870 | 0.0 | 941 |
MS.gene02347.t1 | MTR_1g114150 | 47.290 | 738 | 318 | 15 | 4 | 696 | 337 | 1048 | 0.0 | 631 |
MS.gene02347.t1 | MTR_1g069565 | 46.887 | 755 | 314 | 15 | 10 | 696 | 144 | 879 | 0.0 | 609 |
MS.gene02347.t1 | MTR_5g065200 | 47.743 | 731 | 312 | 18 | 4 | 696 | 134 | 832 | 0.0 | 597 |
MS.gene02347.t1 | MTR_1g114130 | 46.279 | 739 | 326 | 17 | 5 | 696 | 322 | 1036 | 0.0 | 597 |
MS.gene02347.t1 | MTR_1g114070 | 44.904 | 726 | 345 | 14 | 4 | 696 | 219 | 922 | 0.0 | 571 |
MS.gene02347.t1 | MTR_1g069565 | 42.365 | 812 | 324 | 17 | 10 | 696 | 144 | 936 | 0.0 | 557 |
MS.gene02347.t1 | MTR_5g047620 | 45.482 | 664 | 297 | 17 | 87 | 696 | 143 | 795 | 3.35e-175 | 522 |
MS.gene02347.t1 | MTR_1g114150 | 42.925 | 629 | 290 | 14 | 4 | 589 | 337 | 939 | 1.31e-154 | 472 |
MS.gene02347.t1 | MTR_0020s0100 | 43.478 | 644 | 278 | 21 | 87 | 681 | 85 | 691 | 2.57e-148 | 449 |
MS.gene02347.t1 | MTR_2g024240 | 72.260 | 292 | 62 | 4 | 374 | 661 | 112 | 388 | 5.44e-140 | 416 |
MS.gene02347.t1 | MTR_2g024240 | 70.000 | 100 | 28 | 2 | 193 | 291 | 1 | 99 | 1.13e-37 | 145 |
MS.gene02347.t1 | MTR_1g083120 | 33.770 | 764 | 379 | 17 | 3 | 699 | 208 | 911 | 2.54e-139 | 432 |
MS.gene02347.t1 | MTR_1g083120 | 33.770 | 764 | 379 | 17 | 3 | 699 | 191 | 894 | 4.13e-139 | 431 |
MS.gene02347.t1 | MTR_7g117445 | 39.318 | 557 | 276 | 12 | 2 | 518 | 132 | 666 | 1.79e-126 | 397 |
MS.gene02347.t1 | MTR_7g117445 | 66.304 | 92 | 29 | 1 | 548 | 637 | 774 | 865 | 6.20e-31 | 130 |
MS.gene02347.t1 | MTR_7g117445 | 39.318 | 557 | 276 | 12 | 2 | 518 | 132 | 666 | 3.26e-126 | 398 |
MS.gene02347.t1 | MTR_7g117445 | 63.399 | 153 | 54 | 1 | 548 | 698 | 774 | 926 | 7.28e-55 | 203 |
MS.gene02347.t1 | MTR_7g117445 | 39.318 | 557 | 276 | 12 | 2 | 518 | 132 | 666 | 5.36e-126 | 397 |
MS.gene02347.t1 | MTR_7g117445 | 63.399 | 153 | 54 | 1 | 548 | 698 | 774 | 926 | 8.38e-55 | 202 |
MS.gene02347.t1 | MTR_7g117445 | 39.318 | 557 | 276 | 12 | 2 | 518 | 132 | 666 | 5.76e-126 | 398 |
MS.gene02347.t1 | MTR_7g117445 | 63.399 | 153 | 54 | 1 | 548 | 698 | 774 | 926 | 9.41e-55 | 203 |
MS.gene02347.t1 | MTR_1g083120 | 33.285 | 688 | 364 | 16 | 3 | 639 | 191 | 834 | 6.02e-123 | 387 |
MS.gene02347.t1 | MTR_1g083120 | 33.285 | 688 | 364 | 16 | 3 | 639 | 191 | 834 | 7.83e-123 | 387 |
MS.gene02347.t1 | MTR_1g008060 | 41.423 | 548 | 257 | 14 | 3 | 527 | 854 | 1360 | 2.36e-115 | 381 |
MS.gene02347.t1 | MTR_1g008060 | 62.987 | 154 | 55 | 1 | 548 | 699 | 1536 | 1689 | 9.09e-53 | 198 |
MS.gene02347.t1 | MTR_1g008060 | 41.423 | 548 | 257 | 14 | 3 | 527 | 863 | 1369 | 2.94e-115 | 381 |
MS.gene02347.t1 | MTR_1g008060 | 62.987 | 154 | 55 | 1 | 548 | 699 | 1545 | 1698 | 8.63e-53 | 198 |
MS.gene02347.t1 | MTR_2g011630 | 32.066 | 789 | 415 | 20 | 1 | 698 | 198 | 956 | 1.47e-110 | 357 |
MS.gene02347.t1 | MTR_2g011630 | 32.946 | 689 | 369 | 16 | 93 | 698 | 66 | 744 | 5.30e-102 | 329 |
MS.gene02347.t1 | MTR_2g011630 | 32.946 | 689 | 369 | 16 | 93 | 698 | 34 | 712 | 6.02e-102 | 328 |
MS.gene02347.t1 | MTR_8g465700 | 70.492 | 183 | 48 | 2 | 306 | 488 | 1 | 177 | 5.49e-87 | 275 |
MS.gene02347.t1 | MTR_8g465720 | 56.383 | 188 | 38 | 4 | 520 | 704 | 18 | 164 | 1.73e-58 | 195 |
MS.gene02347.t1 | MTR_8g062940 | 33.708 | 356 | 189 | 9 | 10 | 351 | 33 | 355 | 6.39e-52 | 184 |
MS.gene02347.t1 | MTR_4g091520 | 34.085 | 355 | 206 | 6 | 229 | 563 | 648 | 994 | 1.74e-50 | 191 |
MS.gene02347.t1 | MTR_4g091520 | 31.142 | 289 | 159 | 8 | 2 | 272 | 251 | 517 | 1.91e-29 | 125 |
MS.gene02347.t1 | MTR_4g091520 | 34.085 | 355 | 206 | 6 | 229 | 563 | 683 | 1029 | 2.33e-50 | 190 |
MS.gene02347.t1 | MTR_4g091520 | 31.142 | 289 | 159 | 8 | 2 | 272 | 251 | 517 | 2.30e-29 | 125 |
MS.gene02347.t1 | MTR_4g091520 | 34.085 | 355 | 206 | 6 | 229 | 563 | 718 | 1064 | 2.54e-50 | 190 |
MS.gene02347.t1 | MTR_4g091520 | 31.142 | 289 | 159 | 8 | 2 | 272 | 251 | 517 | 2.11e-29 | 125 |
MS.gene02347.t1 | MTR_4g091520 | 34.085 | 355 | 206 | 6 | 229 | 563 | 718 | 1064 | 2.97e-50 | 190 |
MS.gene02347.t1 | MTR_4g091520 | 46.296 | 162 | 82 | 3 | 541 | 698 | 1118 | 1278 | 5.10e-36 | 146 |
MS.gene02347.t1 | MTR_4g091520 | 31.142 | 289 | 159 | 8 | 2 | 272 | 251 | 517 | 2.36e-29 | 125 |
MS.gene02347.t1 | MTR_0295s0020 | 50.968 | 155 | 76 | 0 | 367 | 521 | 12 | 166 | 1.47e-45 | 160 |
MS.gene02347.t1 | MTR_8g013920 | 65.517 | 87 | 26 | 2 | 401 | 487 | 40 | 122 | 1.34e-30 | 119 |
MS.gene02347.t1 | MTR_5g031220 | 40.000 | 85 | 45 | 3 | 393 | 474 | 5 | 86 | 3.86e-11 | 60.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02347.t1 | AT1G62310 | 55.988 | 693 | 272 | 9 | 3 | 679 | 202 | 877 | 0.0 | 779 |
MS.gene02347.t1 | AT1G11950 | 54.802 | 708 | 273 | 10 | 10 | 699 | 193 | 871 | 0.0 | 778 |
MS.gene02347.t1 | AT1G11950 | 54.802 | 708 | 273 | 10 | 10 | 699 | 193 | 871 | 0.0 | 778 |
MS.gene02347.t1 | AT1G11950 | 52.821 | 638 | 254 | 10 | 10 | 629 | 193 | 801 | 0.0 | 669 |
MS.gene02347.t1 | AT4G00990 | 40.409 | 782 | 353 | 17 | 9 | 702 | 79 | 835 | 0.0 | 538 |
MS.gene02347.t1 | AT3G07610 | 40.755 | 768 | 341 | 19 | 10 | 695 | 155 | 890 | 9.96e-168 | 509 |
MS.gene02347.t1 | AT3G07610 | 39.263 | 787 | 348 | 20 | 10 | 695 | 155 | 912 | 3.95e-159 | 487 |
MS.gene02347.t1 | AT4G00990 | 39.172 | 725 | 328 | 17 | 9 | 645 | 79 | 778 | 5.89e-157 | 473 |
MS.gene02347.t1 | AT4G00990 | 39.470 | 717 | 321 | 17 | 9 | 637 | 79 | 770 | 1.38e-155 | 469 |
MS.gene02347.t1 | AT1G09060 | 31.880 | 734 | 410 | 17 | 10 | 699 | 206 | 893 | 5.77e-112 | 360 |
MS.gene02347.t1 | AT1G09060 | 31.880 | 734 | 410 | 17 | 10 | 699 | 206 | 893 | 5.77e-112 | 360 |
MS.gene02347.t1 | AT1G09060 | 31.880 | 734 | 410 | 17 | 10 | 699 | 220 | 907 | 1.54e-111 | 359 |
MS.gene02347.t1 | AT1G09060 | 31.880 | 734 | 410 | 17 | 10 | 699 | 220 | 907 | 1.54e-111 | 359 |
MS.gene02347.t1 | AT3G07610 | 34.946 | 558 | 260 | 15 | 10 | 489 | 155 | 687 | 1.48e-88 | 294 |
MS.gene02347.t1 | AT4G21430 | 34.773 | 440 | 245 | 10 | 300 | 705 | 490 | 921 | 1.51e-69 | 245 |
Find 119 sgRNAs with CRISPR-Local
Find 205 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTCAGAAATTGTACTGTTTA+AGG | 0.120131 | 2.4:+63341141 | MS.gene02347:CDS |
TCATAATTTACAAACATTTA+AGG | 0.131235 | 2.4:+63341195 | MS.gene02347:CDS |
AAAAGTTAGATGCATATTTA+AGG | 0.171830 | 2.4:+63343791 | MS.gene02347:CDS |
AGAACATCACGAACTATAAT+TGG | 0.208434 | 2.4:-63342587 | None:intergenic |
CCACAACCTCCAAGTTCTTT+TGG | 0.218502 | 2.4:-63342332 | None:intergenic |
CTGTTATTAGAAAATTAAAA+AGG | 0.230359 | 2.4:+63343611 | MS.gene02347:CDS |
AATATCTTCGATTGACATAT+TGG | 0.240741 | 2.4:-63341289 | None:intergenic |
AAAAGTATGCCTAAATTCTT+TGG | 0.242870 | 2.4:-63343821 | None:intergenic |
GAGAGCATTGTGCGCAAATT+TGG | 0.252466 | 2.4:+63342652 | MS.gene02347:CDS |
CAGAAACTGGTGGTGCTCTT+TGG | 0.271763 | 2.4:+63343743 | MS.gene02347:CDS |
ACATGTCATAAAGCCTGATT+TGG | 0.301815 | 2.4:+63343344 | MS.gene02347:CDS |
ATAGACCCCTTGGAGATTAA+TGG | 0.305271 | 2.4:+63343679 | MS.gene02347:CDS |
TTGTGCGCAAATTTGGCTTC+AGG | 0.324597 | 2.4:+63342659 | MS.gene02347:CDS |
ATGTCATCGGTGTATGAAAA+AGG | 0.326770 | 2.4:+63341088 | MS.gene02347:CDS |
AGAAACTGGTGGTGCTCTTT+GGG | 0.329119 | 2.4:+63343744 | MS.gene02347:CDS |
TTTACATTCAGACATCTAAT+AGG | 0.330176 | 2.4:+63341622 | MS.gene02347:intron |
CATAATTTACAAACATTTAA+GGG | 0.335589 | 2.4:+63341196 | MS.gene02347:CDS |
ATATCTTCGATTGACATATT+GGG | 0.336054 | 2.4:-63341288 | None:intergenic |
GGAAACACTCCAAAGAATTT+AGG | 0.337467 | 2.4:+63343812 | MS.gene02347:CDS |
GTAATAACTTGATTATATAT+TGG | 0.354787 | 2.4:-63341677 | None:intergenic |
TTGTGGCTATGGTTGTGTTA+TGG | 0.366628 | 2.4:+63342349 | MS.gene02347:CDS |
CACAAAACTTCACTGTGATA+TGG | 0.367632 | 2.4:+63343425 | MS.gene02347:CDS |
CTTCATGATATACTGAGCTT+TGG | 0.368964 | 2.4:-63342417 | None:intergenic |
AAATCAGATATTCTCCCATT+TGG | 0.371858 | 2.4:-63342389 | None:intergenic |
ATTGCAATTCTTACAACAAA+AGG | 0.390679 | 2.4:-63341325 | None:intergenic |
ATCACTATTAGCATTCCATT+TGG | 0.401903 | 2.4:-63342291 | None:intergenic |
CATACACCGATGACATGCTT+TGG | 0.414720 | 2.4:-63341081 | None:intergenic |
AGGTTTGAGTTGGGAGCCTA+TGG | 0.429318 | 2.4:+63342622 | MS.gene02347:CDS |
TAATATAGTACCTGTTCAAC+TGG | 0.429527 | 2.4:-63343850 | None:intergenic |
CTGAAACGCATGCTTCCAAA+TGG | 0.431339 | 2.4:+63342374 | MS.gene02347:CDS |
CTTCTAATTCTTGTACAGCT+TGG | 0.439855 | 2.4:-63344538 | None:intergenic |
TCATCAAAGCATAGAGTTTG+AGG | 0.443536 | 2.4:-63341876 | None:intergenic |
GTTGGGAGCCTATGGTTACT+TGG | 0.443800 | 2.4:+63342630 | MS.gene02347:CDS |
TGACCTTGAGATTTCTGACT+TGG | 0.453559 | 2.4:-63344127 | None:intergenic |
TTGAAGAGAAAATGAATGTT+CGG | 0.457413 | 2.4:+63342453 | MS.gene02347:CDS |
TTGAAGGTGTCGAAACTCTT+CGG | 0.459153 | 2.4:-63344332 | None:intergenic |
CAGATTTCAAATGAACACTT+TGG | 0.460195 | 2.4:-63342110 | None:intergenic |
CAAATTCTTCAAAGGTTACA+AGG | 0.462776 | 2.4:+63343143 | MS.gene02347:CDS |
TGCTCAAAAGAAACAGAAAC+TGG | 0.463190 | 2.4:+63343730 | MS.gene02347:CDS |
CCAAAAGAACTTGGAGGTTG+TGG | 0.465807 | 2.4:+63342332 | MS.gene02347:CDS |
TGGACATTTGAGCAGAAACT+TGG | 0.466489 | 2.4:+63344071 | MS.gene02347:CDS |
AACAAGGGACAGGTTTGAGT+TGG | 0.470587 | 2.4:+63342612 | MS.gene02347:CDS |
GCAACTTTGCAGCAAGGTTG+AGG | 0.472874 | 2.4:-63343317 | None:intergenic |
ACAAGGGACAGGTTTGAGTT+GGG | 0.475477 | 2.4:+63342613 | MS.gene02347:CDS |
GTATCAAAATTTGTTGGTAG+AGG | 0.479805 | 2.4:-63342236 | None:intergenic |
GGATCGCTATACTCTTGAAA+TGG | 0.490375 | 2.4:-63343282 | None:intergenic |
GAACTTGGAGGTTGTGGCTA+TGG | 0.490523 | 2.4:+63342338 | MS.gene02347:CDS |
TTGAATTTCGAAAGCATTGG+AGG | 0.493283 | 2.4:+63342555 | MS.gene02347:CDS |
TTTCGAAAGCATTGGAGGAA+TGG | 0.494705 | 2.4:+63342560 | MS.gene02347:CDS |
AGTAAAAGCCATCGATTGCT+TGG | 0.495169 | 2.4:+63342706 | MS.gene02347:CDS |
TTGATGATGAGCGCATCTAT+TGG | 0.496776 | 2.4:+63341892 | MS.gene02347:CDS |
TTGCAATTCTTACAACAAAA+GGG | 0.499542 | 2.4:-63341324 | None:intergenic |
AAATGCTCAAGCTAAAAGAT+TGG | 0.500496 | 2.4:+63343196 | MS.gene02347:CDS |
CAAATTTCCATTAATCTCCA+AGG | 0.503218 | 2.4:-63343686 | None:intergenic |
GAGTATAGCGATCCTCGAGC+TGG | 0.509998 | 2.4:+63343291 | MS.gene02347:CDS |
GATGTTCTTAAACAAGGGAC+AGG | 0.511480 | 2.4:+63342602 | MS.gene02347:CDS |
AACACTCGCAAATTCTTCAA+AGG | 0.513485 | 2.4:+63343135 | MS.gene02347:CDS |
ATGTTGAGACATTCACCAAA+TGG | 0.520138 | 2.4:+63342276 | MS.gene02347:CDS |
TTTCATTAGATGCTCATCAC+TGG | 0.524868 | 2.4:+63344562 | MS.gene02347:CDS |
AAGTTTCTGCTCAAATGTCC+AGG | 0.526250 | 2.4:-63344069 | None:intergenic |
TATCTTCGATTGACATATTG+GGG | 0.534911 | 2.4:-63341287 | None:intergenic |
CATGTCATAAAGCCTGATTT+GGG | 0.535555 | 2.4:+63343345 | MS.gene02347:CDS |
ATCAAAGAAGAACTTGGAAG+AGG | 0.537226 | 2.4:+63343393 | MS.gene02347:CDS |
AATGTTTGCTTATGTTCAAG+AGG | 0.537390 | 2.4:+63341351 | MS.gene02347:CDS |
ATTAGCTCTTTCACAATCTG+TGG | 0.540172 | 2.4:-63341649 | None:intergenic |
ATAACTTGATTATATATTGG+TGG | 0.540305 | 2.4:-63341674 | None:intergenic |
ATGTTCAAGAGGAATTATCA+AGG | 0.540569 | 2.4:+63341362 | MS.gene02347:CDS |
AAATTTCCATTAATCTCCAA+GGG | 0.542541 | 2.4:-63343685 | None:intergenic |
TTTGATACAAACAATTCAGA+GGG | 0.542912 | 2.4:+63342251 | MS.gene02347:CDS |
TATGGAATCAAAGAAGAACT+TGG | 0.544627 | 2.4:+63343387 | MS.gene02347:CDS |
TTGAGATTTCTGACTTGGTG+TGG | 0.545685 | 2.4:-63344122 | None:intergenic |
GAAGCAGTATTTATTCCTGC+TGG | 0.549657 | 2.4:+63344095 | MS.gene02347:CDS |
AAATCAGGCTTTATGACATG+TGG | 0.556215 | 2.4:-63343342 | None:intergenic |
TTCGTGATGTTCTTAAACAA+GGG | 0.556466 | 2.4:+63342597 | MS.gene02347:CDS |
AAATGGAATGCTAATAGTGA+TGG | 0.557384 | 2.4:+63342293 | MS.gene02347:CDS |
TCAAGATAATATAGACCCCT+TGG | 0.558942 | 2.4:+63343669 | MS.gene02347:CDS |
TTCTTCAAAGGTTACAAGGA+GGG | 0.559654 | 2.4:+63343147 | MS.gene02347:CDS |
TTTATAAAGTCACTTGACAA+TGG | 0.566060 | 2.4:-63342521 | None:intergenic |
GTTCGTGATGTTCTTAAACA+AGG | 0.566626 | 2.4:+63342596 | MS.gene02347:CDS |
TAAAGTCACTTGACAATGGA+CGG | 0.567291 | 2.4:-63342517 | None:intergenic |
TGAGCATAAGAAGAAGCTAA+AGG | 0.568843 | 2.4:+63343990 | MS.gene02347:CDS |
ACTTGGTGTGGACATCCAGC+AGG | 0.572126 | 2.4:-63344110 | None:intergenic |
GAATGTGCTCCAAAAGAACT+TGG | 0.573014 | 2.4:+63342323 | MS.gene02347:CDS |
TGAAACGCATGCTTCCAAAT+GGG | 0.579984 | 2.4:+63342375 | MS.gene02347:CDS |
AGAGGTTATGATTACATGCA+TGG | 0.580101 | 2.4:+63342206 | MS.gene02347:CDS |
TCAATTACAGGTGTAGAACC+TGG | 0.581857 | 2.4:+63344051 | MS.gene02347:intron |
AATCAGGCTTTATGACATGT+GGG | 0.582306 | 2.4:-63343341 | None:intergenic |
AACATTGGTCATGAATAGGA+TGG | 0.583998 | 2.4:-63343954 | None:intergenic |
GAGATTGAAGCTATAATACA+AGG | 0.585372 | 2.4:+63341744 | MS.gene02347:CDS |
TGAAACTTCATTTCAGAGCG+TGG | 0.589382 | 2.4:-63342173 | None:intergenic |
TTGTTTGTATCAAAATTTGT+TGG | 0.593330 | 2.4:-63342242 | None:intergenic |
AAAATTCCAAAGCATGTCAT+CGG | 0.593389 | 2.4:+63341075 | MS.gene02347:CDS |
TATTTGAATTTCGAAAGCAT+TGG | 0.595321 | 2.4:+63342552 | MS.gene02347:CDS |
GGGCACATAAGGCTCAAGAT+CGG | 0.601082 | 2.4:+63343632 | MS.gene02347:CDS |
AGATCTTCAAACTTGTCAGA+AGG | 0.605347 | 2.4:-63343222 | None:intergenic |
CGATTGCTTGGCTAGTTGTG+AGG | 0.606450 | 2.4:+63342718 | MS.gene02347:CDS |
AATGCTCTCCAAGTAACCAT+AGG | 0.613712 | 2.4:-63342638 | None:intergenic |
ACAACTAGCCAAGCAATCGA+TGG | 0.616859 | 2.4:-63342714 | None:intergenic |
GTTTAAGGTGCATCAAACAA+TGG | 0.619517 | 2.4:+63341156 | MS.gene02347:CDS |
TGTTGCAAAGAAATACGCAA+TGG | 0.621957 | 2.4:+63342140 | MS.gene02347:CDS |
ACTCTTGAAATGGCAAGCAA+CGG | 0.622659 | 2.4:-63343272 | None:intergenic |
TCAGGCTTTATGACATGTGG+GGG | 0.630295 | 2.4:-63343339 | None:intergenic |
TCTTCAAACTTGTCAGAAGG+TGG | 0.634708 | 2.4:-63343219 | None:intergenic |
ATCAGGCTTTATGACATGTG+GGG | 0.635513 | 2.4:-63343340 | None:intergenic |
TGTGCTCCAAAAGAACTTGG+AGG | 0.649295 | 2.4:+63342326 | MS.gene02347:CDS |
ACACCAAGTCAGAAATCTCA+AGG | 0.651808 | 2.4:+63344124 | MS.gene02347:CDS |
TCACTGTGATATGGCAGATG+CGG | 0.655612 | 2.4:+63343434 | MS.gene02347:CDS |
ATTTGGTGAATGTCTCAACA+TGG | 0.656800 | 2.4:-63342274 | None:intergenic |
ATTCTTCAAAGGTTACAAGG+AGG | 0.679618 | 2.4:+63343146 | MS.gene02347:CDS |
AACGGATAAACTCATCACAA+TGG | 0.689117 | 2.4:-63343254 | None:intergenic |
AGGTTGAGGATTCCAGCTCG+AGG | 0.693598 | 2.4:-63343303 | None:intergenic |
ATCTTCGATTGACATATTGG+GGG | 0.707852 | 2.4:-63341286 | None:intergenic |
AATTTCCATTAATCTCCAAG+GGG | 0.708604 | 2.4:-63343684 | None:intergenic |
TCAAAAGAAACAGAAACTGG+TGG | 0.714549 | 2.4:+63343733 | MS.gene02347:CDS |
ACACCTTCAAAAGAATCACA+AGG | 0.716617 | 2.4:+63344345 | MS.gene02347:CDS |
ATAAACTCATCACAATGGCG+CGG | 0.720209 | 2.4:-63343249 | None:intergenic |
GGCAAGAGAAGACAAACTTG+AGG | 0.724823 | 2.4:+63344366 | MS.gene02347:CDS |
CAATCGAAGATATTGCAGAG+AGG | 0.739364 | 2.4:+63341298 | MS.gene02347:CDS |
GGTTATGATTACATGCATGG+TGG | 0.788197 | 2.4:+63342209 | MS.gene02347:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TGTTATTAGAAAATTAAAAA+GGG | + | chr2.4:63343612-63343631 | MS.gene02347:CDS | 10.0% |
!! | TTGAAAAAATAGAATAATTA+AGG | - | chr2.4:63341936-63341955 | None:intergenic | 10.0% |
!!! | AATTGATTGATATTTTTTAA+TGG | + | chr2.4:63344481-63344500 | MS.gene02347:intron | 10.0% |
!! | AACTTTATATGCATATATTT+GGG | + | chr2.4:63343074-63343093 | MS.gene02347:intron | 15.0% |
!! | CATAATTTACAAACATTTAA+GGG | + | chr2.4:63341196-63341215 | MS.gene02347:CDS | 15.0% |
!! | CTGTTATTAGAAAATTAAAA+AGG | + | chr2.4:63343611-63343630 | MS.gene02347:CDS | 15.0% |
!! | GTAATAACTTGATTATATAT+TGG | - | chr2.4:63341680-63341699 | None:intergenic | 15.0% |
!! | TAACTTTATATGCATATATT+TGG | + | chr2.4:63343073-63343092 | MS.gene02347:intron | 15.0% |
!! | TCATAATTTACAAACATTTA+AGG | + | chr2.4:63341195-63341214 | MS.gene02347:CDS | 15.0% |
!!! | AGTAAACTTCTTTTTATATA+TGG | + | chr2.4:63342777-63342796 | MS.gene02347:intron | 15.0% |
!!! | CTATTTTTTCAAATCATTAT+TGG | + | chr2.4:63341944-63341963 | MS.gene02347:intron | 15.0% |
!!! | TATTTTTCATTTTTGCATAT+AGG | + | chr2.4:63341261-63341280 | MS.gene02347:intron | 15.0% |
!! | AAAAGTTAGATGCATATTTA+AGG | + | chr2.4:63343791-63343810 | MS.gene02347:CDS | 20.0% |
!! | AAGTTTCAATACAAAAATAG+AGG | + | chr2.4:63342188-63342207 | MS.gene02347:CDS | 20.0% |
!! | ATAACTTGATTATATATTGG+TGG | - | chr2.4:63341677-63341696 | None:intergenic | 20.0% |
!! | CAATAGTCAAATAAAAACAT+TGG | - | chr2.4:63343972-63343991 | None:intergenic | 20.0% |
!! | GAAGAACATATAAAAATCTT+TGG | + | chr2.4:63343169-63343188 | MS.gene02347:CDS | 20.0% |
!! | GTAGAAAAAATACATGTATT+TGG | + | chr2.4:63344189-63344208 | MS.gene02347:intron | 20.0% |
!! | TAGAAACAATAAAGTAAATG+TGG | - | chr2.4:63343513-63343532 | None:intergenic | 20.0% |
!! | TTGTTTGTATCAAAATTTGT+TGG | - | chr2.4:63342245-63342264 | None:intergenic | 20.0% |
!!! | AAAAACACTTTTAAAGCATA+GGG | - | chr2.4:63342990-63343009 | None:intergenic | 20.0% |
!!! | AATTAGATTTTGAAGCTAAA+TGG | - | chr2.4:63343031-63343050 | None:intergenic | 20.0% |
!!! | CTAAGTTGAATTAAAACTAA+CGG | - | chr2.4:63341582-63341601 | None:intergenic | 20.0% |
!!! | TCAAAAATTTGTTCAACAAA+AGG | - | chr2.4:63341705-63341724 | None:intergenic | 20.0% |
!!! | TTGAATTGCAAGTATAATTT+TGG | + | chr2.4:63341442-63341461 | MS.gene02347:intron | 20.0% |
!!! | TTTTGTTCAATAAATTTGAC+AGG | + | chr2.4:63343537-63343556 | MS.gene02347:intron | 20.0% |
!!! | TTTTTTTTTAGTAAGTGAGT+CGG | - | chr2.4:63342869-63342888 | None:intergenic | 20.0% |
! | AAATTTCCATTAATCTCCAA+GGG | - | chr2.4:63343688-63343707 | None:intergenic | 25.0% |
! | AACATATAAAAATCTTTGGC+CGG | + | chr2.4:63343173-63343192 | MS.gene02347:CDS | 25.0% |
! | AATATCTTCGATTGACATAT+TGG | - | chr2.4:63341292-63341311 | None:intergenic | 25.0% |
! | ATATCTTCGATTGACATATT+GGG | - | chr2.4:63341291-63341310 | None:intergenic | 25.0% |
! | ATCAAGTGAATAAGTGAAAA+AGG | - | chr2.4:63340994-63341013 | None:intergenic | 25.0% |
! | ATTATGAATCACTCATAACA+CGG | - | chr2.4:63342005-63342024 | None:intergenic | 25.0% |
! | ATTGCAATTCTTACAACAAA+AGG | - | chr2.4:63341328-63341347 | None:intergenic | 25.0% |
! | CAAAAGAAAGAAAGACAAAA+AGG | - | chr2.4:63344419-63344438 | None:intergenic | 25.0% |
! | CATAAGAGAAACTAATCTAT+GGG | - | chr2.4:63341406-63341425 | None:intergenic | 25.0% |
! | CCAAAAACTTATATTGCTTA+TGG | + | chr2.4:63343369-63343388 | MS.gene02347:CDS | 25.0% |
! | GATACTACCTAAATAGTTAA+GGG | - | chr2.4:63341486-63341505 | None:intergenic | 25.0% |
! | TAAAAACATTGGTCATGAAT+AGG | - | chr2.4:63343961-63343980 | None:intergenic | 25.0% |
! | TCATAAGAGAAACTAATCTA+TGG | - | chr2.4:63341407-63341426 | None:intergenic | 25.0% |
! | TTGAAGAGAAAATGAATGTT+CGG | + | chr2.4:63342453-63342472 | MS.gene02347:CDS | 25.0% |
! | TTGCAATTCTTACAACAAAA+GGG | - | chr2.4:63341327-63341346 | None:intergenic | 25.0% |
! | TTTACATTCAGACATCTAAT+AGG | + | chr2.4:63341622-63341641 | MS.gene02347:intron | 25.0% |
! | TTTATAAAGTCACTTGACAA+TGG | - | chr2.4:63342524-63342543 | None:intergenic | 25.0% |
! | TTTGATACAAACAATTCAGA+GGG | + | chr2.4:63342251-63342270 | MS.gene02347:CDS | 25.0% |
!! | AAAAGTATGCCTAAATTCTT+TGG | - | chr2.4:63343824-63343843 | None:intergenic | 25.0% |
!! | AAAATTAAAAAGGGCACATA+AGG | + | chr2.4:63343621-63343640 | MS.gene02347:CDS | 25.0% |
!! | AACTTCTTTGTTGGTTAATT+AGG | + | chr2.4:63343927-63343946 | MS.gene02347:intron | 25.0% |
!! | AATTTCTGACATTTTGTACA+AGG | - | chr2.4:63341131-63341150 | None:intergenic | 25.0% |
!! | CCATAAGCAATATAAGTTTT+TGG | - | chr2.4:63343372-63343391 | None:intergenic | 25.0% |
!! | GTACATTTAAAGTCATGTTT+CGG | + | chr2.4:63342952-63342971 | MS.gene02347:intron | 25.0% |
!! | TACATTTAAAGTCATGTTTC+GGG | + | chr2.4:63342953-63342972 | MS.gene02347:intron | 25.0% |
!! | TATTTGAATTTCGAAAGCAT+TGG | + | chr2.4:63342552-63342571 | MS.gene02347:CDS | 25.0% |
!! | TTTTGAATTGTGTAAGTCTA+TGG | + | chr2.4:63342804-63342823 | MS.gene02347:intron | 25.0% |
!! | TTTTGATACAAACAATTCAG+AGG | + | chr2.4:63342250-63342269 | MS.gene02347:CDS | 25.0% |
!!! | GAAAAACACTTTTAAAGCAT+AGG | - | chr2.4:63342991-63343010 | None:intergenic | 25.0% |
!!! | TATTTACGTTTTATTCCTTC+AGG | + | chr2.4:63342926-63342945 | MS.gene02347:intron | 25.0% |
!!! | TTTTGGCTAAATTGCATTTT+TGG | + | chr2.4:63341459-63341478 | MS.gene02347:intron | 25.0% |
AAAATTCCAAAGCATGTCAT+CGG | + | chr2.4:63341075-63341094 | MS.gene02347:CDS | 30.0% | |
AAATCAGATATTCTCCCATT+TGG | - | chr2.4:63342392-63342411 | None:intergenic | 30.0% | |
AAATGCTCAAGCTAAAAGAT+TGG | + | chr2.4:63343196-63343215 | MS.gene02347:CDS | 30.0% | |
AAATGGAATGCTAATAGTGA+TGG | + | chr2.4:63342293-63342312 | MS.gene02347:CDS | 30.0% | |
AAGTCTATGGCATATTAATG+AGG | + | chr2.4:63342817-63342836 | MS.gene02347:intron | 30.0% | |
AATGTTTGCTTATGTTCAAG+AGG | + | chr2.4:63341351-63341370 | MS.gene02347:CDS | 30.0% | |
AATTTCCATTAATCTCCAAG+GGG | - | chr2.4:63343687-63343706 | None:intergenic | 30.0% | |
AGAACATCACGAACTATAAT+TGG | - | chr2.4:63342590-63342609 | None:intergenic | 30.0% | |
ATCACTATTAGCATTCCATT+TGG | - | chr2.4:63342294-63342313 | None:intergenic | 30.0% | |
ATGTTCAAGAGGAATTATCA+AGG | + | chr2.4:63341362-63341381 | MS.gene02347:CDS | 30.0% | |
CAAATTCTTCAAAGGTTACA+AGG | + | chr2.4:63343143-63343162 | MS.gene02347:CDS | 30.0% | |
CAAATTTCCATTAATCTCCA+AGG | - | chr2.4:63343689-63343708 | None:intergenic | 30.0% | |
CAGATTTCAAATGAACACTT+TGG | - | chr2.4:63342113-63342132 | None:intergenic | 30.0% | |
CATGACTCTTAATCAATTAC+AGG | + | chr2.4:63344039-63344058 | MS.gene02347:intron | 30.0% | |
CGATACTACCTAAATAGTTA+AGG | - | chr2.4:63341487-63341506 | None:intergenic | 30.0% | |
CTGCTCAAAAAAACAAAAGA+CGG | - | chr2.4:63342047-63342066 | None:intergenic | 30.0% | |
GAAAAGACCAAAATGTGTAA+CGG | - | chr2.4:63341560-63341579 | None:intergenic | 30.0% | |
GAGATTGAAGCTATAATACA+AGG | + | chr2.4:63341744-63341763 | MS.gene02347:CDS | 30.0% | |
GTCAGAAATTGTACTGTTTA+AGG | + | chr2.4:63341141-63341160 | MS.gene02347:CDS | 30.0% | |
TAACCAACAAAGAAGTTAGT+GGG | - | chr2.4:63343924-63343943 | None:intergenic | 30.0% | |
TAATATAGTACCTGTTCAAC+TGG | - | chr2.4:63343853-63343872 | None:intergenic | 30.0% | |
TATCTTCGATTGACATATTG+GGG | - | chr2.4:63341290-63341309 | None:intergenic | 30.0% | |
TATGGAATCAAAGAAGAACT+TGG | + | chr2.4:63343387-63343406 | MS.gene02347:CDS | 30.0% | |
TGCAACTTGTGTTAATTAAC+AGG | + | chr2.4:63341043-63341062 | MS.gene02347:intron | 30.0% | |
TGGTTGAAAAGGATGAATAT+TGG | - | chr2.4:63343100-63343119 | None:intergenic | 30.0% | |
TTAACCAACAAAGAAGTTAG+TGG | - | chr2.4:63343925-63343944 | None:intergenic | 30.0% | |
TTCGTGATGTTCTTAAACAA+GGG | + | chr2.4:63342597-63342616 | MS.gene02347:CDS | 30.0% | |
! | CTAACAATAAACTTGATAGC+AGG | + | chr2.4:63341828-63341847 | MS.gene02347:intron | 30.0% |
! | TTTTGGTCCCTTAACTATTT+AGG | + | chr2.4:63341476-63341495 | MS.gene02347:intron | 30.0% |
!! | ATTTTCTGGTGAAACAAAGT+CGG | - | chr2.4:63344290-63344309 | None:intergenic | 30.0% |
!! | GTATCAAAATTTGTTGGTAG+AGG | - | chr2.4:63342239-63342258 | None:intergenic | 30.0% |
!!! | ATTTTGACTCATACAACTGA+GGG | + | chr2.4:63343565-63343584 | MS.gene02347:CDS | 30.0% |
!!! | TATTTTGACTCATACAACTG+AGG | + | chr2.4:63343564-63343583 | MS.gene02347:CDS | 30.0% |
AACACTCGCAAATTCTTCAA+AGG | + | chr2.4:63343135-63343154 | MS.gene02347:CDS | 35.0% | |
AACATTGGTCATGAATAGGA+TGG | - | chr2.4:63343957-63343976 | None:intergenic | 35.0% | |
AACGGATAAACTCATCACAA+TGG | - | chr2.4:63343257-63343276 | None:intergenic | 35.0% | |
AAGAAGCTAAAGGAAGAGTT+TGG | + | chr2.4:63344000-63344019 | MS.gene02347:intron | 35.0% | |
ACACCTTCAAAAGAATCACA+AGG | + | chr2.4:63344345-63344364 | MS.gene02347:CDS | 35.0% | |
ACATGTCATAAAGCCTGATT+TGG | + | chr2.4:63343344-63343363 | MS.gene02347:CDS | 35.0% | |
AGAGGTTATGATTACATGCA+TGG | + | chr2.4:63342206-63342225 | MS.gene02347:CDS | 35.0% | |
AGATCTTCAAACTTGTCAGA+AGG | - | chr2.4:63343225-63343244 | None:intergenic | 35.0% | |
ATCAAAGAAGAACTTGGAAG+AGG | + | chr2.4:63343393-63343412 | MS.gene02347:CDS | 35.0% | |
ATCGGTGTATGAAAAAGGAT+AGG | + | chr2.4:63341093-63341112 | MS.gene02347:CDS | 35.0% | |
ATCTTCGATTGACATATTGG+GGG | - | chr2.4:63341289-63341308 | None:intergenic | 35.0% | |
ATGTCATCGGTGTATGAAAA+AGG | + | chr2.4:63341088-63341107 | MS.gene02347:CDS | 35.0% | |
ATGTTGAGACATTCACCAAA+TGG | + | chr2.4:63342276-63342295 | MS.gene02347:CDS | 35.0% | |
ATTCTTCAAAGGTTACAAGG+AGG | + | chr2.4:63343146-63343165 | MS.gene02347:CDS | 35.0% | |
CAAGAGGAATTATCAAGGTT+TGG | + | chr2.4:63341367-63341386 | MS.gene02347:intron | 35.0% | |
CACAAAACTTCACTGTGATA+TGG | + | chr2.4:63343425-63343444 | MS.gene02347:CDS | 35.0% | |
CATGTCATAAAGCCTGATTT+GGG | + | chr2.4:63343345-63343364 | MS.gene02347:CDS | 35.0% | |
CTATTTAGGTAGTATCGCTT+TGG | + | chr2.4:63341490-63341509 | MS.gene02347:intron | 35.0% | |
CTTCATGATATACTGAGCTT+TGG | - | chr2.4:63342420-63342439 | None:intergenic | 35.0% | |
CTTCTAATTCTTGTACAGCT+TGG | - | chr2.4:63344541-63344560 | None:intergenic | 35.0% | |
GGAAACACTCCAAAGAATTT+AGG | + | chr2.4:63343812-63343831 | MS.gene02347:CDS | 35.0% | |
GTGTTAATTTCTACCTGCAA+TGG | - | chr2.4:63343120-63343139 | None:intergenic | 35.0% | |
GTTCGTGATGTTCTTAAACA+AGG | + | chr2.4:63342596-63342615 | MS.gene02347:CDS | 35.0% | |
TAAAGTCACTTGACAATGGA+CGG | - | chr2.4:63342520-63342539 | None:intergenic | 35.0% | |
TAATGAGGCCTACAACAAAT+TGG | + | chr2.4:63342832-63342851 | MS.gene02347:intron | 35.0% | |
TCAAAAGAAACAGAAACTGG+TGG | + | chr2.4:63343733-63343752 | MS.gene02347:CDS | 35.0% | |
TCAAGATAATATAGACCCCT+TGG | + | chr2.4:63343669-63343688 | MS.gene02347:CDS | 35.0% | |
TCATCAAAGCATAGAGTTTG+AGG | - | chr2.4:63341879-63341898 | None:intergenic | 35.0% | |
TGAGCATAAGAAGAAGCTAA+AGG | + | chr2.4:63343990-63344009 | MS.gene02347:CDS | 35.0% | |
TGCTCAAAAGAAACAGAAAC+TGG | + | chr2.4:63343730-63343749 | MS.gene02347:CDS | 35.0% | |
TGTTGCAAAGAAATACGCAA+TGG | + | chr2.4:63342140-63342159 | MS.gene02347:CDS | 35.0% | |
TTCTTCAAAGGTTACAAGGA+GGG | + | chr2.4:63343147-63343166 | MS.gene02347:CDS | 35.0% | |
TTTCATTAGATGCTCATCAC+TGG | + | chr2.4:63344562-63344581 | MS.gene02347:CDS | 35.0% | |
! | AAATCAGGCTTTATGACATG+TGG | - | chr2.4:63343345-63343364 | None:intergenic | 35.0% |
! | AATCAGGCTTTATGACATGT+GGG | - | chr2.4:63343344-63343363 | None:intergenic | 35.0% |
! | ATGCAGATATGCACATTTTC+TGG | - | chr2.4:63344304-63344323 | None:intergenic | 35.0% |
! | ATTAGCTCTTTCACAATCTG+TGG | - | chr2.4:63341652-63341671 | None:intergenic | 35.0% |
! | ATTTAAAGTCATGTTTCGGG+TGG | + | chr2.4:63342956-63342975 | MS.gene02347:intron | 35.0% |
! | ATTTGGTGAATGTCTCAACA+TGG | - | chr2.4:63342277-63342296 | None:intergenic | 35.0% |
! | GTTTAAGGTGCATCAAACAA+TGG | + | chr2.4:63341156-63341175 | MS.gene02347:CDS | 35.0% |
! | TGTTTCTTTTGAGCACACTT+GGG | - | chr2.4:63343725-63343744 | None:intergenic | 35.0% |
! | TTGCCTTGTGATTCTTTTGA+AGG | - | chr2.4:63344351-63344370 | None:intergenic | 35.0% |
! | TTTTTGTTCTCCAGTTGAAC+AGG | + | chr2.4:63343840-63343859 | MS.gene02347:CDS | 35.0% |
!! | AAGTTCCTCCAATTTGTTGT+AGG | - | chr2.4:63342843-63342862 | None:intergenic | 35.0% |
!! | TAAGTTTTTGGACCCAAATC+AGG | - | chr2.4:63343360-63343379 | None:intergenic | 35.0% |
!! | TGGAATTCTTTGGCTCATTT+TGG | + | chr2.4:63342742-63342761 | MS.gene02347:intron | 35.0% |
!! | TTGAATTTCGAAAGCATTGG+AGG | + | chr2.4:63342555-63342574 | MS.gene02347:CDS | 35.0% |
!! | TTTTGACTCATACAACTGAG+GGG | + | chr2.4:63343566-63343585 | MS.gene02347:CDS | 35.0% |
!!! | TCTTTTAGCTTGAGCATTTC+CGG | - | chr2.4:63343195-63343214 | None:intergenic | 35.0% |
AAGTTTCTGCTCAAATGTCC+AGG | - | chr2.4:63344072-63344091 | None:intergenic | 40.0% | |
AATGCTCTCCAAGTAACCAT+AGG | - | chr2.4:63342641-63342660 | None:intergenic | 40.0% | |
ACACCAAGTCAGAAATCTCA+AGG | + | chr2.4:63344124-63344143 | MS.gene02347:CDS | 40.0% | |
ACTCTTGAAATGGCAAGCAA+CGG | - | chr2.4:63343275-63343294 | None:intergenic | 40.0% | |
AGTCCCACTAACTTCTTTGT+TGG | + | chr2.4:63343918-63343937 | MS.gene02347:intron | 40.0% | |
ATAAACTCATCACAATGGCG+CGG | - | chr2.4:63343252-63343271 | None:intergenic | 40.0% | |
ATAGACCCCTTGGAGATTAA+TGG | + | chr2.4:63343679-63343698 | MS.gene02347:CDS | 40.0% | |
CAATCGAAGATATTGCAGAG+AGG | + | chr2.4:63341298-63341317 | MS.gene02347:CDS | 40.0% | |
CTTTAAATGTACACGCCTGA+AGG | - | chr2.4:63342944-63342963 | None:intergenic | 40.0% | |
GAAGCAGTATTTATTCCTGC+TGG | + | chr2.4:63344095-63344114 | MS.gene02347:CDS | 40.0% | |
GAATGTGCTCCAAAAGAACT+TGG | + | chr2.4:63342323-63342342 | MS.gene02347:CDS | 40.0% | |
GATGTTCTTAAACAAGGGAC+AGG | + | chr2.4:63342602-63342621 | MS.gene02347:CDS | 40.0% | |
GGATCGCTATACTCTTGAAA+TGG | - | chr2.4:63343285-63343304 | None:intergenic | 40.0% | |
GGTTATGATTACATGCATGG+TGG | + | chr2.4:63342209-63342228 | MS.gene02347:CDS | 40.0% | |
GTTGTGAGGTTGGAATTCTT+TGG | + | chr2.4:63342732-63342751 | MS.gene02347:intron | 40.0% | |
TCAATTACAGGTGTAGAACC+TGG | + | chr2.4:63344051-63344070 | MS.gene02347:intron | 40.0% | |
TCTACCTGCAATGGTTGAAA+AGG | - | chr2.4:63343111-63343130 | None:intergenic | 40.0% | |
TCTTCAAACTTGTCAGAAGG+TGG | - | chr2.4:63343222-63343241 | None:intergenic | 40.0% | |
TGAAACGCATGCTTCCAAAT+GGG | + | chr2.4:63342375-63342394 | MS.gene02347:CDS | 40.0% | |
TGAAACTTCATTTCAGAGCG+TGG | - | chr2.4:63342176-63342195 | None:intergenic | 40.0% | |
TGACCTTGAGATTTCTGACT+TGG | - | chr2.4:63344130-63344149 | None:intergenic | 40.0% | |
TGGACATTTGAGCAGAAACT+TGG | + | chr2.4:63344071-63344090 | MS.gene02347:CDS | 40.0% | |
TTGTGGCTATGGTTGTGTTA+TGG | + | chr2.4:63342349-63342368 | MS.gene02347:CDS | 40.0% | |
! | AGTAAAAGCCATCGATTGCT+TGG | + | chr2.4:63342706-63342725 | MS.gene02347:CDS | 40.0% |
! | ATCAGGCTTTATGACATGTG+GGG | - | chr2.4:63343343-63343362 | None:intergenic | 40.0% |
! | CTTCTCTCCGTTACACATTT+TGG | + | chr2.4:63341550-63341569 | MS.gene02347:intron | 40.0% |
! | GTGTAACGGAGAGAAGTTAA+GGG | - | chr2.4:63341546-63341565 | None:intergenic | 40.0% |
! | TCATCCTTTTCAACCATTGC+AGG | + | chr2.4:63343104-63343123 | MS.gene02347:intron | 40.0% |
! | TGTGTAACGGAGAGAAGTTA+AGG | - | chr2.4:63341547-63341566 | None:intergenic | 40.0% |
!! | CTGTTTCTTTTGAGCACACT+TGG | - | chr2.4:63343726-63343745 | None:intergenic | 40.0% |
!! | TTGAAGGTGTCGAAACTCTT+CGG | - | chr2.4:63344335-63344354 | None:intergenic | 40.0% |
!! | TTGAGATTTCTGACTTGGTG+TGG | - | chr2.4:63344125-63344144 | None:intergenic | 40.0% |
!! | TTGATGATGAGCGCATCTAT+TGG | + | chr2.4:63341892-63341911 | MS.gene02347:CDS | 40.0% |
!! | TTTCGAAAGCATTGGAGGAA+TGG | + | chr2.4:63342560-63342579 | MS.gene02347:CDS | 40.0% |
AACAAGGGACAGGTTTGAGT+TGG | + | chr2.4:63342612-63342631 | MS.gene02347:CDS | 45.0% | |
ACAACTAGCCAAGCAATCGA+TGG | - | chr2.4:63342717-63342736 | None:intergenic | 45.0% | |
CATACACCGATGACATGCTT+TGG | - | chr2.4:63341084-63341103 | None:intergenic | 45.0% | |
CCAAAAGAACTTGGAGGTTG+TGG | + | chr2.4:63342332-63342351 | MS.gene02347:CDS | 45.0% | |
CTGAAACGCATGCTTCCAAA+TGG | + | chr2.4:63342374-63342393 | MS.gene02347:CDS | 45.0% | |
GGCAAGAGAAGACAAACTTG+AGG | + | chr2.4:63344366-63344385 | MS.gene02347:CDS | 45.0% | |
TCACTGTGATATGGCAGATG+CGG | + | chr2.4:63343434-63343453 | MS.gene02347:CDS | 45.0% | |
TGAGGCCTACAACAAATTGG+AGG | + | chr2.4:63342835-63342854 | MS.gene02347:intron | 45.0% | |
TGTGCTCCAAAAGAACTTGG+AGG | + | chr2.4:63342326-63342345 | MS.gene02347:CDS | 45.0% | |
! | ACAAGGGACAGGTTTGAGTT+GGG | + | chr2.4:63342613-63342632 | MS.gene02347:CDS | 45.0% |
! | AGAAACTGGTGGTGCTCTTT+GGG | + | chr2.4:63343744-63343763 | MS.gene02347:CDS | 45.0% |
! | CCACAACCTCCAAGTTCTTT+TGG | - | chr2.4:63342335-63342354 | None:intergenic | 45.0% |
! | TCAGGCTTTATGACATGTGG+GGG | - | chr2.4:63343342-63343361 | None:intergenic | 45.0% |
! | TTGTGCGCAAATTTGGCTTC+AGG | + | chr2.4:63342659-63342678 | MS.gene02347:CDS | 45.0% |
!! | GAGAGCATTGTGCGCAAATT+TGG | + | chr2.4:63342652-63342671 | MS.gene02347:CDS | 45.0% |
!! | AAAAATATAATAAAATTAGA+TGG | - | chr2.4:63341605-63341624 | None:intergenic | 5.0% |
!!! | AATAAATCAAATTTTAATTA+AGG | - | chr2.4:63341518-63341537 | None:intergenic | 5.0% |
!!! | AATTAAAATTTGATTTATTT+TGG | + | chr2.4:63341519-63341538 | MS.gene02347:intron | 5.0% |
!!! | ATAAATCAAATTTTAATTAA+GGG | - | chr2.4:63341517-63341536 | None:intergenic | 5.0% |
GAACTTGGAGGTTGTGGCTA+TGG | + | chr2.4:63342338-63342357 | MS.gene02347:CDS | 50.0% | |
GCAACTTTGCAGCAAGGTTG+AGG | - | chr2.4:63343320-63343339 | None:intergenic | 50.0% | |
GGGCACATAAGGCTCAAGAT+CGG | + | chr2.4:63343632-63343651 | MS.gene02347:CDS | 50.0% | |
GTTGGGAGCCTATGGTTACT+TGG | + | chr2.4:63342630-63342649 | MS.gene02347:CDS | 50.0% | |
! | CAGAAACTGGTGGTGCTCTT+TGG | + | chr2.4:63343743-63343762 | MS.gene02347:CDS | 50.0% |
! | CGATTGCTTGGCTAGTTGTG+AGG | + | chr2.4:63342718-63342737 | MS.gene02347:CDS | 50.0% |
! | TGCTTGGCTAGTTGTGAGGT+TGG | + | chr2.4:63342722-63342741 | MS.gene02347:intron | 50.0% |
!! | AGGTTTGAGTTGGGAGCCTA+TGG | + | chr2.4:63342622-63342641 | MS.gene02347:CDS | 50.0% |
AGGTTGAGGATTCCAGCTCG+AGG | - | chr2.4:63343306-63343325 | None:intergenic | 55.0% | |
GAGTATAGCGATCCTCGAGC+TGG | + | chr2.4:63343291-63343310 | MS.gene02347:CDS | 55.0% | |
!! | ACTTGGTGTGGACATCCAGC+AGG | - | chr2.4:63344113-63344132 | None:intergenic | 55.0% |
GTGGGGGCAACTTTGCAGCA+AGG | - | chr2.4:63343326-63343345 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.4 | gene | 63340981 | 63344589 | 63340981 | ID=MS.gene02347 |
chr2.4 | mRNA | 63340981 | 63344589 | 63340981 | ID=MS.gene02347.t1;Parent=MS.gene02347 |
chr2.4 | exon | 63340981 | 63340983 | 63340981 | ID=MS.gene02347.t1.exon1;Parent=MS.gene02347.t1 |
chr2.4 | CDS | 63340981 | 63340983 | 63340981 | ID=cds.MS.gene02347.t1;Parent=MS.gene02347.t1 |
chr2.4 | exon | 63341065 | 63341221 | 63341065 | ID=MS.gene02347.t1.exon2;Parent=MS.gene02347.t1 |
chr2.4 | CDS | 63341065 | 63341221 | 63341065 | ID=cds.MS.gene02347.t1;Parent=MS.gene02347.t1 |
chr2.4 | exon | 63341283 | 63341383 | 63341283 | ID=MS.gene02347.t1.exon3;Parent=MS.gene02347.t1 |
chr2.4 | CDS | 63341283 | 63341383 | 63341283 | ID=cds.MS.gene02347.t1;Parent=MS.gene02347.t1 |
chr2.4 | exon | 63341633 | 63341765 | 63341633 | ID=MS.gene02347.t1.exon4;Parent=MS.gene02347.t1 |
chr2.4 | CDS | 63341633 | 63341765 | 63341633 | ID=cds.MS.gene02347.t1;Parent=MS.gene02347.t1 |
chr2.4 | exon | 63341850 | 63341913 | 63341850 | ID=MS.gene02347.t1.exon5;Parent=MS.gene02347.t1 |
chr2.4 | CDS | 63341850 | 63341913 | 63341850 | ID=cds.MS.gene02347.t1;Parent=MS.gene02347.t1 |
chr2.4 | exon | 63342067 | 63342739 | 63342067 | ID=MS.gene02347.t1.exon6;Parent=MS.gene02347.t1 |
chr2.4 | CDS | 63342067 | 63342739 | 63342067 | ID=cds.MS.gene02347.t1;Parent=MS.gene02347.t1 |
chr2.4 | exon | 63343126 | 63343455 | 63343126 | ID=MS.gene02347.t1.exon7;Parent=MS.gene02347.t1 |
chr2.4 | CDS | 63343126 | 63343455 | 63343126 | ID=cds.MS.gene02347.t1;Parent=MS.gene02347.t1 |
chr2.4 | exon | 63343559 | 63343861 | 63343559 | ID=MS.gene02347.t1.exon8;Parent=MS.gene02347.t1 |
chr2.4 | CDS | 63343559 | 63343861 | 63343559 | ID=cds.MS.gene02347.t1;Parent=MS.gene02347.t1 |
chr2.4 | exon | 63343949 | 63344016 | 63343949 | ID=MS.gene02347.t1.exon9;Parent=MS.gene02347.t1 |
chr2.4 | CDS | 63343949 | 63344016 | 63343949 | ID=cds.MS.gene02347.t1;Parent=MS.gene02347.t1 |
chr2.4 | exon | 63344061 | 63344145 | 63344061 | ID=MS.gene02347.t1.exon10;Parent=MS.gene02347.t1 |
chr2.4 | CDS | 63344061 | 63344145 | 63344061 | ID=cds.MS.gene02347.t1;Parent=MS.gene02347.t1 |
chr2.4 | exon | 63344268 | 63344387 | 63344268 | ID=MS.gene02347.t1.exon11;Parent=MS.gene02347.t1 |
chr2.4 | CDS | 63344268 | 63344387 | 63344268 | ID=cds.MS.gene02347.t1;Parent=MS.gene02347.t1 |
chr2.4 | exon | 63344509 | 63344589 | 63344509 | ID=MS.gene02347.t1.exon12;Parent=MS.gene02347.t1 |
chr2.4 | CDS | 63344509 | 63344589 | 63344509 | ID=cds.MS.gene02347.t1;Parent=MS.gene02347.t1 |
Gene Sequence |
Protein sequence |