AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene023483

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene023483.t1 MTR_8g083100 98.563 487 7 0 1 487 1 487 0.0 998
MS.gene023483.t1 MTR_2g100680 74.607 445 110 2 1 444 12 454 0.0 677
MS.gene023483.t1 MTR_6g043060 85.274 292 43 0 1 292 1 292 0.0 514
MS.gene023483.t1 MTR_6g043060 75.556 45 11 0 412 456 284 328 1.35e-14 75.1
MS.gene023483.t1 MTR_2g100670 68.456 298 74 3 1 297 14 292 1.98e-137 398
MS.gene023483.t1 MTR_2g100670 68.456 298 74 3 1 297 122 400 3.25e-135 397
MS.gene023483.t1 MTR_6g044340 62.069 232 46 2 68 299 8 197 1.04e-87 270
MS.gene023483.t1 MTR_6g044340 75.000 72 18 0 386 457 192 263 1.82e-27 111
MS.gene023483.t1 MTR_5g029680 50.935 214 91 4 19 218 29 242 1.12e-64 218
MS.gene023483.t1 MTR_8g087540 50.952 210 92 4 13 217 4 207 1.66e-63 211
MS.gene023483.t1 MTR_6g044430 62.245 196 24 3 100 295 14 159 4.96e-63 205
MS.gene023483.t1 MTR_6g044430 55.372 121 44 3 346 457 110 229 3.22e-26 106
MS.gene023483.t1 MTR_4g077970 46.860 207 98 3 22 216 12 218 8.97e-56 194
MS.gene023483.t1 MTR_6g044440 75.397 126 18 1 174 299 1 113 1.59e-53 178
MS.gene023483.t1 MTR_6g044440 75.000 72 18 0 386 457 108 179 2.25e-28 111
MS.gene023483.t1 MTR_7g095680 46.411 209 102 4 19 217 46 254 5.29e-51 177
MS.gene023483.t1 MTR_1g102860 45.631 206 100 5 19 215 37 239 1.97e-50 175
MS.gene023483.t1 MTR_6g055650 80.000 105 17 1 220 324 49 149 7.19e-49 165
MS.gene023483.t1 MTR_3g104550 44.390 205 104 5 19 216 43 244 1.32e-48 171
MS.gene023483.t1 MTR_6g055660 84.270 89 14 0 264 352 1 89 2.13e-46 156
MS.gene023483.t1 MTR_1g071360 44.633 177 90 2 20 195 30 199 3.01e-46 164
MS.gene023483.t1 MTR_1g071360 44.633 177 90 2 20 195 27 196 5.43e-46 164
MS.gene023483.t1 MTR_1g061170 34.528 307 190 7 22 323 49 349 7.00e-46 166
MS.gene023483.t1 MTR_8g105780 48.969 194 86 6 21 201 21 214 5.78e-44 159
MS.gene023483.t1 MTR_3g101870 72.340 94 26 0 20 113 22 115 2.01e-43 157
MS.gene023483.t1 MTR_6g044350 61.538 143 24 3 174 310 1 118 2.29e-42 147
MS.gene023483.t1 MTR_6g044350 78.571 42 9 0 402 443 105 146 1.16e-15 74.3
MS.gene023483.t1 MTR_2g017890 62.037 108 41 0 12 119 5 112 4.06e-42 154
MS.gene023483.t1 MTR_5g010680 61.111 108 42 0 6 113 8 115 7.59e-42 153
MS.gene023483.t1 MTR_5g017470 60.748 107 42 0 19 125 6 112 2.42e-41 149
MS.gene023483.t1 MTR_5g089170 69.149 94 29 0 20 113 23 116 5.48e-41 147
MS.gene023483.t1 MTR_6g086805 39.286 224 103 4 21 230 10 214 1.50e-40 149
MS.gene023483.t1 MTR_0020s0020 63.830 94 34 0 20 113 31 124 5.17e-38 142
MS.gene023483.t1 MTR_1g100777 60.417 96 38 0 20 115 16 111 3.61e-37 139
MS.gene023483.t1 MTR_7g091370 51.327 113 55 0 1 113 1 113 7.17e-36 133
MS.gene023483.t1 MTR_4g088900 57.143 98 38 1 20 113 31 128 3.12e-33 125
MS.gene023483.t1 MTR_6g044500 68.421 95 11 1 205 299 1 76 7.94e-33 120
MS.gene023483.t1 MTR_6g044510 82.759 58 10 0 400 457 31 88 3.90e-25 99.4
MS.gene023483.t1 MTR_6g044510 68.085 47 14 1 264 310 1 46 4.18e-11 59.7
MS.gene023483.t1 MTR_5g047190 50.515 97 41 2 30 119 1 97 2.39e-24 97.4
MS.gene023483.t1 MTR_4g045757 67.241 58 19 0 22 79 14 71 4.12e-20 84.7
MS.gene023483.t1 MTR_1g061170 27.239 268 176 9 61 323 1 254 6.60e-14 73.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene023483.t1 AT4G13980 51.107 497 202 10 1 487 1 466 6.70e-145 423
MS.gene023483.t1 AT1G32330 47.234 235 105 5 1 216 16 250 8.07e-61 207
MS.gene023483.t1 AT1G32330 47.234 235 105 5 1 216 16 250 9.19e-61 207
MS.gene023483.t1 AT4G17750 46.352 233 104 4 5 216 35 267 5.55e-60 205
MS.gene023483.t1 AT5G16820 50.000 210 90 5 22 217 27 235 3.47e-58 200
MS.gene023483.t1 AT5G16820 50.000 210 90 5 22 217 27 235 3.47e-58 200
MS.gene023483.t1 AT3G02990 46.119 219 105 4 22 228 23 240 2.30e-57 197
MS.gene023483.t1 AT4G18880 51.174 213 94 3 14 220 7 215 2.42e-55 190
MS.gene023483.t1 AT3G22830 43.662 213 106 4 19 217 58 270 4.38e-50 176
MS.gene023483.t1 AT2G26150 43.243 222 118 4 19 232 41 262 8.59e-50 174
MS.gene023483.t1 AT2G26150 43.243 222 118 4 19 232 41 262 8.59e-50 174
MS.gene023483.t1 AT5G45710 45.370 216 103 4 14 224 6 211 3.62e-49 172
MS.gene023483.t1 AT5G45710 45.370 216 103 4 14 224 6 211 3.62e-49 172
MS.gene023483.t1 AT3G51910 42.995 207 102 4 14 215 21 216 4.10e-47 164
MS.gene023483.t1 AT5G43840 45.745 188 90 3 20 205 17 194 3.07e-45 160
MS.gene023483.t1 AT5G03720 45.556 180 95 2 22 198 55 234 4.65e-45 163
MS.gene023483.t1 AT5G03720 45.556 180 95 2 22 198 55 234 4.65e-45 163
MS.gene023483.t1 AT1G46264 59.016 122 40 1 14 125 26 147 3.13e-44 159
MS.gene023483.t1 AT1G67970 45.550 191 91 5 21 201 18 205 2.22e-43 157
MS.gene023483.t1 AT3G24520 44.809 183 78 4 21 202 16 176 9.28e-43 154
MS.gene023483.t1 AT5G54070 42.029 207 109 3 18 218 67 268 2.58e-42 153
MS.gene023483.t1 AT3G63350 37.447 235 132 3 5 227 3 234 2.75e-42 152
MS.gene023483.t1 AT5G62020 52.101 119 56 1 1 118 1 119 6.01e-38 140
MS.gene023483.t1 AT4G11660 62.766 94 35 0 20 113 57 150 2.67e-37 141
MS.gene023483.t1 AT4G36990 60.417 96 38 0 20 115 12 107 5.28e-37 138
MS.gene023483.t1 AT2G41690 53.846 117 54 0 20 136 38 154 2.16e-36 135
MS.gene023483.t1 AT4G18870 47.368 95 49 1 15 109 6 99 3.97e-21 94.0
MS.gene023483.t1 AT4G18870 45.455 88 48 0 22 109 146 233 5.76e-21 93.6
MS.gene023483.t1 AT1G77570 42.222 90 49 2 23 109 27 116 7.37e-18 80.9
MS.gene023483.t1 AT2G26150 35.664 143 84 4 82 216 49 191 2.08e-16 80.1
MS.gene023483.t1 AT2G26150 35.664 143 84 4 82 216 49 191 2.08e-16 80.1

Find 131 sgRNAs with CRISPR-Local

Find 245 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTCCAATGCTGCCCTTTC+TGG -0.033953 4.3:+15606106 None:intergenic
CAATTTCCTGACAGTTTATT+TGG 0.134687 4.3:+15605366 None:intergenic
TCTGCAAGGTCTAGTGTTTC+AGG 0.179480 4.3:+15605581 None:intergenic
AGCAATTTCAGACTGGAATT+TGG 0.185327 4.3:-15605785 MS.gene023483:CDS
CCTTCTTCTTGCTCACTATT+TGG 0.197563 4.3:+15605104 None:intergenic
CTTCTTTGAGAAGGCTCTTC+AGG 0.211830 4.3:-15605939 MS.gene023483:CDS
ATCCATGTTCTTGATGTTAC+TGG 0.248725 4.3:+15605061 None:intergenic
CAAATAAACTGTCAGGAAAT+TGG 0.249049 4.3:-15605365 MS.gene023483:CDS
GGCTCCAGAGAATGAAGATT+TGG 0.274713 4.3:+15605491 None:intergenic
ACACTAGACCTTGCAGATAC+TGG 0.281618 4.3:-15605575 MS.gene023483:CDS
CTGTCAGGAAATTGGCAATT+TGG 0.285988 4.3:-15605357 MS.gene023483:CDS
GAAATTGTTGTGCTTGAAAT+AGG 0.289577 4.3:+15607972 None:intergenic
CCACAGATGAGATTGTTTCT+TGG 0.293970 4.3:-15608059 MS.gene023483:CDS
AATTTCCTGACAGTTTATTT+GGG 0.297215 4.3:+15605367 None:intergenic
ATAACAAAAGCTTCATTGTT+TGG 0.304742 4.3:-15608029 MS.gene023483:CDS
ACGGGGTGAATGATGTGTTT+TGG 0.315138 4.3:-15605196 MS.gene023483:CDS
GCAATTTCAGACTGGAATTT+GGG 0.327997 4.3:-15605784 MS.gene023483:CDS
GATGGTAAAGAATCTGAAAT+TGG 0.330710 4.3:-15605314 MS.gene023483:CDS
CTTGTACATTGGAATTCAAT+AGG 0.346549 4.3:-15605412 MS.gene023483:CDS
AGAAGAACACGGGAGAATTC+AGG 0.363985 4.3:+15608000 None:intergenic
CAAAATCGAATCCATGGATT+TGG 0.364324 4.3:-15605888 MS.gene023483:CDS
AACTCTGGCATCTTGTACAT+TGG 0.365517 4.3:-15605423 MS.gene023483:CDS
CTATCACCTTCTTCAGTACT+TGG 0.371141 4.3:+15605470 None:intergenic
GAAGAAGGGCGGTCAGTTCA+TGG 0.385884 4.3:-15605089 MS.gene023483:CDS
ATTAGCCACATTTCGGTTTG+TGG 0.388053 4.3:+15605286 None:intergenic
TCAGATATGAACTTGATATC+AGG 0.394555 4.3:-15605704 MS.gene023483:CDS
ATTTGGAATTGCTCGATAGT+TGG 0.404937 4.3:+15605121 None:intergenic
TAGCCTCATTAGCCACATTT+CGG 0.405235 4.3:+15605279 None:intergenic
TCAAAGCTGCTGCTCGGCAC+GGG 0.408584 4.3:-15605214 MS.gene023483:CDS
ACAGGAATGCAGACAAGAAC+TGG 0.408767 4.3:-15605617 MS.gene023483:CDS
GCTCCAGAGAATGAAGATTT+GGG 0.410466 4.3:+15605492 None:intergenic
CACTAGACCTTGCAGATACT+GGG 0.411215 4.3:-15605574 MS.gene023483:CDS
GCCGCTGCCGCCGGAGGAAG+CGG 0.414745 4.3:-15608135 MS.gene023483:CDS
CGGAGGAAGCGGAGGAGGTC+CGG 0.415280 4.3:-15608124 MS.gene023483:CDS
ACCAAGCTACCTTCGGCAAC+AGG 0.417714 4.3:+15605818 None:intergenic
CAGAGTTAAATTTAGTTGGC+AGG 0.423956 4.3:+15605439 None:intergenic
AGCTTAAGAGCTTGGATTGA+AGG 0.426622 4.3:+15606050 None:intergenic
GTGCCCAAATCTTCATTCTC+TGG 0.429020 4.3:-15605495 MS.gene023483:CDS
ACGTTACCTGAAGCCTCCTT+TGG 0.431681 4.3:+15605242 None:intergenic
ATGCCAGAGTTAAATTTAGT+TGG 0.435087 4.3:+15605435 None:intergenic
TCCGCTTCCTCCGGCGGCAG+CGG 0.440478 4.3:+15608134 None:intergenic
ATAACTGTAGCTTAAGAGCT+TGG 0.443695 4.3:+15606042 None:intergenic
GCCGAGCAGCAGCTTTGACT+TGG 0.452625 4.3:+15605219 None:intergenic
TAAGAAAAGGCGATTGCCTC+AGG 0.456333 4.3:-15605855 MS.gene023483:CDS
TGGCAGCTTATAATAAGAAA+AGG 0.461564 4.3:-15605868 MS.gene023483:CDS
TTACCTGAAGCCTCCTTTGG+TGG 0.465202 4.3:+15605245 None:intergenic
GCTCCACCAAAGGAGGCTTC+AGG 0.466668 4.3:-15605248 MS.gene023483:CDS
GCCGCCGGAGGAAGCGGAGG+AGG 0.467841 4.3:-15608129 MS.gene023483:CDS
AAAAGCAGATCCTGAGCGTT+GGG 0.472666 4.3:-15606236 MS.gene023483:CDS
CCCAAGACAGCATGCTCAAA+GGG 0.473933 4.3:+15605031 None:intergenic
TCCTCATCAGCCGCTGCCGC+CGG 0.477669 4.3:-15608144 MS.gene023483:CDS
TTCCCGCAAAATCGAATCCA+TGG 0.478636 4.3:-15605894 MS.gene023483:CDS
TCACAGTCATAGTCATCCTC+CGG 0.482739 4.3:-15606143 MS.gene023483:CDS
CCAAATAGTGAGCAAGAAGA+AGG 0.485282 4.3:-15605104 MS.gene023483:CDS
GGATGACTATGACTGTGAAT+AGG 0.487235 4.3:+15606148 None:intergenic
GTCGCCCCAAATAAACTGTC+AGG 0.490553 4.3:-15605372 MS.gene023483:CDS
AATTCCAGTCTGAAATTGCT+AGG 0.494876 4.3:+15605788 None:intergenic
AGATCCAGAAAGGGCAGCAT+TGG 0.494908 4.3:-15606110 MS.gene023483:CDS
TGTTGTGCTTGAAATAGGTT+GGG 0.496826 4.3:+15607977 None:intergenic
ACAGTTTATTTGGGGCGACC+TGG 0.496979 4.3:+15605376 None:intergenic
TGAGACAGAAAAGCTTCAGC+TGG 0.500611 4.3:-15606017 MS.gene023483:CDS
CTGCCAACTAAATTTAACTC+TGG 0.500806 4.3:-15605438 MS.gene023483:CDS
AAACCGAAATGTGGCTAATG+AGG 0.502956 4.3:-15605282 MS.gene023483:CDS
ATTGAGCTGACGGATGAAGC+TGG 0.506271 4.3:+15607948 None:intergenic
GTCAAAGCTGCTGCTCGGCA+CGG 0.509514 4.3:-15605215 MS.gene023483:CDS
TTTGCAGAACTTCTTTGAGA+AGG 0.509914 4.3:-15605948 MS.gene023483:CDS
GCCTGTTGCCGAAGGTAGCT+TGG 0.510527 4.3:-15605819 MS.gene023483:CDS
TCCGGCGGCAGCGGCTGATG+AGG 0.511352 4.3:+15608143 None:intergenic
TTGTTGTGCTTGAAATAGGT+TGG 0.514168 4.3:+15607976 None:intergenic
CTGCAAGGTCTAGTGTTTCA+GGG 0.517628 4.3:+15605582 None:intergenic
ATAGGAATTCATACTCGGCC+AGG 0.518045 4.3:-15605394 MS.gene023483:CDS
TCTTCATTGTCTGAACAGCC+TGG 0.518791 4.3:+15605152 None:intergenic
TTGGCAAACTCCCAACGCTC+AGG 0.519786 4.3:+15606226 None:intergenic
AACAGCCTGGTCTTTCAGTA+AGG 0.527046 4.3:+15605165 None:intergenic
AGTTTATTTGAGATATCTTG+AGG 0.532987 4.3:+15605752 None:intergenic
GCTTAAGAGCTTGGATTGAA+GGG 0.534276 4.3:+15606051 None:intergenic
ATTATAAGCTGCCAAATCCA+TGG 0.537709 4.3:+15605877 None:intergenic
GTTTATTTGAGATATCTTGA+GGG 0.542382 4.3:+15605753 None:intergenic
CTCCAGTAACATCAAGAACA+TGG 0.542746 4.3:-15605063 MS.gene023483:CDS
TCATACGTCTTCTGAAGAAA+CGG 0.543831 4.3:+15608099 None:intergenic
GAAAAGCAGATCCTGAGCGT+TGG 0.545857 4.3:-15606237 MS.gene023483:CDS
CTGTCTGAAGGAGAACTGAC+AGG 0.546477 4.3:-15605635 MS.gene023483:CDS
TTCTGTTGTAGATCCAGAAA+GGG 0.548363 4.3:-15606119 MS.gene023483:CDS
CAATCCTAGCAATTTCAGAC+TGG 0.548773 4.3:-15605792 MS.gene023483:CDS
TCAGCGGCGATTGGATGGCA+TGG 0.549084 4.3:-15605987 MS.gene023483:CDS
ATTGTCAACCAAGCTACCTT+CGG 0.550180 4.3:+15605811 None:intergenic
CAAAGCTGCTGCTCGGCACG+GGG 0.552279 4.3:-15605213 MS.gene023483:CDS
CACAGTCATAGTCATCCTCC+GGG 0.559092 4.3:-15606142 MS.gene023483:CDS
CGGACCTCCTCCGCTTCCTC+CGG 0.560425 4.3:+15608125 None:intergenic
GAGTCAAGAGTTAACGCTGA+TGG 0.561131 4.3:-15605332 MS.gene023483:CDS
CTGGAGCCAAGTACTGAAGA+AGG 0.565718 4.3:-15605476 MS.gene023483:CDS
TTCTGAAGAATATACACCGC+AGG 0.566868 4.3:-15606174 MS.gene023483:CDS
GCTGCCGCCGGAGGAAGCGG+AGG 0.569858 4.3:-15608132 MS.gene023483:CDS
TCATCAGCCGCTGCCGCCGG+AGG 0.573945 4.3:-15608141 MS.gene023483:CDS
AGAAACAATCTCATCTGTGG+TGG 0.575757 4.3:+15608062 None:intergenic
AAGTTCATATCTGAGACAGC+TGG 0.576214 4.3:+15605713 None:intergenic
GTTCTGTTGTAGATCCAGAA+AGG 0.581921 4.3:-15606120 MS.gene023483:CDS
ACCTCCTCCGCTTCCTCCGG+CGG 0.590329 4.3:+15608128 None:intergenic
GATTGGATGGCATGGAGAAG+AGG 0.590608 4.3:-15605979 MS.gene023483:CDS
CAATCTAGCTCCACCAAAGG+AGG 0.593167 4.3:-15605255 MS.gene023483:CDS
CACGTGCAGCCTGTTGCCGA+AGG 0.594030 4.3:-15605827 MS.gene023483:CDS
GCAGCGGCTGATGAGGATTG+TGG 0.595315 4.3:+15608150 None:intergenic
GTCTTCTGAAGAAACGGTGC+CGG 0.596431 4.3:+15608105 None:intergenic
TTACATAGGTATTGAGCTGA+CGG 0.598207 4.3:+15607938 None:intergenic
TCCAAGTCAAAGCTGCTGCT+CGG 0.603523 4.3:-15605220 MS.gene023483:CDS
CAAATAGTGAGCAAGAAGAA+GGG 0.604496 4.3:-15605103 MS.gene023483:CDS
ATTTCCTGACAGTTTATTTG+GGG 0.606554 4.3:+15605368 None:intergenic
AATAGGTTGGGAGAAGAACA+CGG 0.613461 4.3:+15607989 None:intergenic
CCAAGAAACAATCTCATCTG+TGG 0.622637 4.3:+15608059 None:intergenic
AGTTTCCACAAACCGAAATG+TGG 0.624523 4.3:-15605291 MS.gene023483:CDS
GTGTTTCAGGGGTAAAAGCA+AGG 0.625370 4.3:+15605594 None:intergenic
TTGATATCAGGTAGCACACA+GGG 0.633161 4.3:-15605692 MS.gene023483:CDS
ACAGGGTTCAAACGAAGATG+AGG 0.634687 4.3:-15605675 MS.gene023483:CDS
TGCAAGGTCTAGTGTTTCAG+GGG 0.637403 4.3:+15605583 None:intergenic
ATTCAATAGGAATTCATACT+CGG 0.642142 4.3:-15605399 MS.gene023483:CDS
GACTGTGAATAGGTTTCCTG+CGG 0.644543 4.3:+15606158 None:intergenic
AGAACACGGGAGAATTCAGG+AGG 0.649555 4.3:+15608003 None:intergenic
ATAGGTTGGGAGAAGAACAC+GGG 0.651753 4.3:+15607990 None:intergenic
AATTTCCTTACTGAAAGACC+AGG 0.654469 4.3:-15605170 MS.gene023483:CDS
TCTGGATCTACAACAGAACC+CGG 0.658691 4.3:+15606124 None:intergenic
AAGATGCCCCAGTATCTGCA+AGG 0.666464 4.3:+15605567 None:intergenic
AGGCTGTTCAGACAATGAAG+AGG 0.672815 4.3:-15605150 MS.gene023483:CDS
TATCAATCTAGCTCCACCAA+AGG 0.674289 4.3:-15605258 MS.gene023483:CDS
TCTTCAGAAGACGTATGACA+TGG 0.676071 4.3:-15608094 MS.gene023483:CDS
CTTGATATCAGGTAGCACAC+AGG 0.676389 4.3:-15605693 MS.gene023483:CDS
GGCTGCACGTGATCAACCTG+AGG 0.691898 4.3:+15605839 None:intergenic
TCAGAAGACGTATGACATGG+TGG 0.698200 4.3:-15608091 MS.gene023483:CDS
ACTAGACCTTGCAGATACTG+GGG 0.701020 4.3:-15605573 MS.gene023483:CDS
ATAGTGAGCAAGAAGAAGGG+CGG 0.709670 4.3:-15605100 MS.gene023483:CDS
GAACACGGGAGAATTCAGGA+GGG 0.754078 4.3:+15608004 None:intergenic
GGATCTACAACAGAACCCGG+AGG 0.788653 4.3:+15606127 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTATGTTTTAATTTGTTA+TGG - chr4.3:15606916-15606935 MS.gene023483:intron 10.0%
!! ATAAATATGATATGATGATA+TGG - chr4.3:15605956-15605975 MS.gene023483:CDS 15.0%
!! ATATCATATTTATATAGTTC+AGG + chr4.3:15605949-15605968 None:intergenic 15.0%
!! ATATTCTTGTAAAGATTTAA+TGG - chr4.3:15606834-15606853 MS.gene023483:intron 15.0%
!! TCAATAAAAATTTACAATAC+AGG + chr4.3:15606685-15606704 None:intergenic 15.0%
!!! ATCTTTTATAAATTCTTCAT+TGG + chr4.3:15607004-15607023 None:intergenic 15.0%
!! AATGGGAAAATTTAACATTT+AGG + chr4.3:15606532-15606551 None:intergenic 20.0%
!! AGGATTAAACAATAAAAATC+TGG + chr4.3:15606571-15606590 None:intergenic 20.0%
!! ATGGGAAAATTTAACATTTA+GGG + chr4.3:15606531-15606550 None:intergenic 20.0%
!! ATGTGAAAGATTTGAAAATA+AGG + chr4.3:15606483-15606502 None:intergenic 20.0%
!! ATTATGAACAACTTTAGATT+TGG - chr4.3:15605497-15605516 MS.gene023483:CDS 20.0%
!! GGATTAAACAATAAAAATCT+GGG + chr4.3:15606570-15606589 None:intergenic 20.0%
!!! AAGCTAACTTTTTTTTTTCA+TGG + chr4.3:15606431-15606450 None:intergenic 20.0%
!!! AATTTAGTCTTTGAAGTATA+TGG - chr4.3:15606032-15606051 MS.gene023483:CDS 20.0%
!!! AGATATTATATAGTCTTGTA+CGG - chr4.3:15605582-15605601 MS.gene023483:CDS 20.0%
!!! ATTTATATGTGCTTTTTATC+AGG - chr4.3:15606942-15606961 MS.gene023483:intron 20.0%
!!! TTATTTTCAAATCTTTCACA+TGG - chr4.3:15606482-15606501 MS.gene023483:intron 20.0%
!!! TTTATATGTGCTTTTTATCA+GGG - chr4.3:15606943-15606962 MS.gene023483:intron 20.0%
! AAATAGAAATCATGCACTTA+TGG - chr4.3:15606745-15606764 MS.gene023483:intron 25.0%
! AATTTCCTGACAGTTTATTT+GGG + chr4.3:15607844-15607863 None:intergenic 25.0%
! ATAACAAAAGCTTCATTGTT+TGG - chr4.3:15605179-15605198 MS.gene023483:CDS 25.0%
! ATATTCAGAGACTAAATTGA+TGG + chr4.3:15605905-15605924 None:intergenic 25.0%
! ATGGCAATGATTAAAAACTA+AGG - chr4.3:15606764-15606783 MS.gene023483:intron 25.0%
! ATTACACACATAAAAACTTC+AGG + chr4.3:15606809-15606828 None:intergenic 25.0%
! ATTCAATAGGAATTCATACT+CGG - chr4.3:15607809-15607828 MS.gene023483:intron 25.0%
! TAAAAATCTGGGTTATAGTA+TGG + chr4.3:15606559-15606578 None:intergenic 25.0%
! TGGGCAATTATTGAATTTAA+AGG - chr4.3:15606343-15606362 MS.gene023483:intron 25.0%
! TTGATATCTAACTCTTAGAT+AGG - chr4.3:15606716-15606735 MS.gene023483:intron 25.0%
! TTGTTTATCATTAAAGCCAT+AGG + chr4.3:15606886-15606905 None:intergenic 25.0%
!! ACTACTTATCATGTTTCTAT+AGG - chr4.3:15606132-15606151 MS.gene023483:CDS 25.0%
!! AGTTTATTTGAGATATCTTG+AGG + chr4.3:15607459-15607478 None:intergenic 25.0%
!! CTACTTATCATGTTTCTATA+GGG - chr4.3:15606133-15606152 MS.gene023483:CDS 25.0%
!! GTTTATTTGAGATATCTTGA+GGG + chr4.3:15607458-15607477 None:intergenic 25.0%
!!! ATTGACACATTTTTGTTTTC+CGG + chr4.3:15606015-15606034 None:intergenic 25.0%
AAAAAAAATTCTGCAGCATC+TGG - chr4.3:15605845-15605864 MS.gene023483:CDS 30.0%
AATCTGCTTAGTAAGATAGT+AGG - chr4.3:15605473-15605492 MS.gene023483:CDS 30.0%
AATTGGAGTTGCAAAATGTT+GGG - chr4.3:15605534-15605553 MS.gene023483:CDS 30.0%
ACACTGAATTATGTCATTGT+CGG + chr4.3:15605672-15605691 None:intergenic 30.0%
ATGCCAGAGTTAAATTTAGT+TGG + chr4.3:15607776-15607795 None:intergenic 30.0%
ATTCAATAATTGCCCATGTA+TGG + chr4.3:15606339-15606358 None:intergenic 30.0%
ATTTCCTGACAGTTTATTTG+GGG + chr4.3:15607843-15607862 None:intergenic 30.0%
CAAATAAACTGTCAGGAAAT+TGG - chr4.3:15607843-15607862 MS.gene023483:intron 30.0%
CAATTTCCTGACAGTTTATT+TGG + chr4.3:15607845-15607864 None:intergenic 30.0%
CTTGTACATTGGAATTCAAT+AGG - chr4.3:15607796-15607815 MS.gene023483:intron 30.0%
GAAATTGTTGTGCTTGAAAT+AGG + chr4.3:15605239-15605258 None:intergenic 30.0%
GGTTATAGTATGGACTTAAT+GGG + chr4.3:15606549-15606568 None:intergenic 30.0%
TAATTCAGGGACTAAATTGA+TGG - chr4.3:15606182-15606201 MS.gene023483:CDS 30.0%
TAATTGGAGTTGCAAAATGT+TGG - chr4.3:15605533-15605552 MS.gene023483:CDS 30.0%
TCAGATATGAACTTGATATC+AGG - chr4.3:15607504-15607523 MS.gene023483:intron 30.0%
TCATCATATCACACTATTTC+TGG + chr4.3:15605989-15606008 None:intergenic 30.0%
TCTGAATATCACACTATTTC+TGG - chr4.3:15605916-15605935 MS.gene023483:CDS 30.0%
TGGATTTCATTGAGTCTAAT+TGG - chr4.3:15605517-15605536 MS.gene023483:CDS 30.0%
TGGCAGCTTATAATAAGAAA+AGG - chr4.3:15607340-15607359 MS.gene023483:intron 30.0%
TTGATTGATATGATGATACC+CGG - chr4.3:15606639-15606658 MS.gene023483:intron 30.0%
! CTATCTCTTTTACCAAAACA+AGG + chr4.3:15606248-15606267 None:intergenic 30.0%
! GATGGTAAAGAATCTGAAAT+TGG - chr4.3:15607894-15607913 MS.gene023483:intron 30.0%
! TAGCATGAATTGACTTACAT+AGG + chr4.3:15605287-15605306 None:intergenic 30.0%
! TAGGGACTAAATTTGAGATA+GGG - chr4.3:15606156-15606175 MS.gene023483:CDS 30.0%
! TATCATGTTTCTATAGGGTA+GGG - chr4.3:15606138-15606157 MS.gene023483:CDS 30.0%
! TTATCATGTTTCTATAGGGT+AGG - chr4.3:15606137-15606156 MS.gene023483:CDS 30.0%
!! GGCATCTTTTACTTTTAACA+TGG - chr4.3:15607656-15607675 MS.gene023483:intron 30.0%
!!! TGTTTGCCATTTTTGTTTTC+CGG + chr4.3:15606661-15606680 None:intergenic 30.0%
!!! TTGACACATTTTTGTTTTCC+GGG + chr4.3:15606014-15606033 None:intergenic 30.0%
!!! TTGATGGTTTTATTCATGAC+TGG + chr4.3:15605889-15605908 None:intergenic 30.0%
AAAACTTCAGGAAGCAAATC+TGG + chr4.3:15606797-15606816 None:intergenic 35.0%
AAATTAAGACCTACGAAGCA+TGG + chr4.3:15605763-15605782 None:intergenic 35.0%
AATCGTTCAAAGAAGTTTGC+AGG - chr4.3:15606859-15606878 MS.gene023483:intron 35.0%
AATTATGTCATTGTCGGTGT+CGG + chr4.3:15605666-15605685 None:intergenic 35.0%
AATTTCCTTACTGAAAGACC+AGG - chr4.3:15608038-15608057 MS.gene023483:CDS 35.0%
AGCAATTTCAGACTGGAATT+TGG - chr4.3:15607423-15607442 MS.gene023483:intron 35.0%
ATAACTGTAGCTTAAGAGCT+TGG + chr4.3:15607169-15607188 None:intergenic 35.0%
ATCCATCTTTCATCATTCTC+AGG + chr4.3:15605561-15605580 None:intergenic 35.0%
ATCCATGTTCTTGATGTTAC+TGG + chr4.3:15608150-15608169 None:intergenic 35.0%
ATTATAAGCTGCCAAATCCA+TGG + chr4.3:15607334-15607353 None:intergenic 35.0%
CAAAATCGAATCCATGGATT+TGG - chr4.3:15607320-15607339 MS.gene023483:intron 35.0%
CAAATAGTGAGCAAGAAGAA+GGG - chr4.3:15608105-15608124 MS.gene023483:CDS 35.0%
CAGAGTTAAATTTAGTTGGC+AGG + chr4.3:15607772-15607791 None:intergenic 35.0%
CTGCCAACTAAATTTAACTC+TGG - chr4.3:15607770-15607789 MS.gene023483:intron 35.0%
CTTAGTCGAGTTTCAATTAG+TGG - chr4.3:15605407-15605426 MS.gene023483:CDS 35.0%
GCAATTTCAGACTGGAATTT+GGG - chr4.3:15607424-15607443 MS.gene023483:intron 35.0%
GGGTTATAGTATGGACTTAA+TGG + chr4.3:15606550-15606569 None:intergenic 35.0%
TAGTGTGATATGATGATACC+CGG - chr4.3:15605993-15606012 MS.gene023483:CDS 35.0%
TGAGATAGGGTGATAATTCA+GGG - chr4.3:15606169-15606188 MS.gene023483:CDS 35.0%
TGATACCCGGAAAACAAAAA+TGG - chr4.3:15606006-15606025 MS.gene023483:CDS 35.0%
TGTTGTGCTTGAAATAGGTT+GGG + chr4.3:15605234-15605253 None:intergenic 35.0%
TTCTGTTGTAGATCCAGAAA+GGG - chr4.3:15607089-15607108 MS.gene023483:intron 35.0%
TTGAGATAGGGTGATAATTC+AGG - chr4.3:15606168-15606187 MS.gene023483:CDS 35.0%
TTGTTGTGCTTGAAATAGGT+TGG + chr4.3:15605235-15605254 None:intergenic 35.0%
! AATCCATGGATTCGATTTTG+CGG + chr4.3:15607320-15607339 None:intergenic 35.0%
! AATTCCAGTCTGAAATTGCT+AGG + chr4.3:15607423-15607442 None:intergenic 35.0%
! ATTTGGAATTGCTCGATAGT+TGG + chr4.3:15608090-15608109 None:intergenic 35.0%
! GCTTCGTAGGTCTTAATTTT+CGG - chr4.3:15605764-15605783 MS.gene023483:CDS 35.0%
! GTAGGGACTAAATTTGAGAT+AGG - chr4.3:15606155-15606174 MS.gene023483:CDS 35.0%
! GTGACTTGTGACTAAATTGA+CGG - chr4.3:15606091-15606110 MS.gene023483:CDS 35.0%
! TCATACGTCTTCTGAAGAAA+CGG + chr4.3:15605112-15605131 None:intergenic 35.0%
! TGACTTGTGACTAAATTGAC+GGG - chr4.3:15606092-15606111 MS.gene023483:CDS 35.0%
! TTTGCAGAACTTCTTTGAGA+AGG - chr4.3:15607260-15607279 MS.gene023483:intron 35.0%
!! TAGGTCTTAATTTTCGGTGT+GGG - chr4.3:15605770-15605789 MS.gene023483:CDS 35.0%
!! TTACATAGGTATTGAGCTGA+CGG + chr4.3:15605273-15605292 None:intergenic 35.0%
!!! GTTTGCCATTTTTGTTTTCC+GGG + chr4.3:15606660-15606679 None:intergenic 35.0%
AAACCGAAATGTGGCTAATG+AGG - chr4.3:15607926-15607945 MS.gene023483:intron 40.0%
AAAGAAGTTTGCAGGTCCTA+TGG - chr4.3:15606867-15606886 MS.gene023483:intron 40.0%
AACTCTGGCATCTTGTACAT+TGG - chr4.3:15607785-15607804 MS.gene023483:intron 40.0%
AGAAACAATCTCATCTGTGG+TGG + chr4.3:15605149-15605168 None:intergenic 40.0%
AGCTTAAGAGCTTGGATTGA+AGG + chr4.3:15607161-15607180 None:intergenic 40.0%
AGTTTCCACAAACCGAAATG+TGG - chr4.3:15607917-15607936 MS.gene023483:intron 40.0%
ATTGTCAACCAAGCTACCTT+CGG + chr4.3:15607400-15607419 None:intergenic 40.0%
CAAAACAAGGACGAGTTGTA+TGG + chr4.3:15606235-15606254 None:intergenic 40.0%
CAATCCTAGCAATTTCAGAC+TGG - chr4.3:15607416-15607435 MS.gene023483:intron 40.0%
CCAAATAGTGAGCAAGAAGA+AGG - chr4.3:15608104-15608123 MS.gene023483:CDS 40.0%
CCAAGAAACAATCTCATCTG+TGG + chr4.3:15605152-15605171 None:intergenic 40.0%
CCTTCTTCTTGCTCACTATT+TGG + chr4.3:15608107-15608126 None:intergenic 40.0%
CTATCACCTTCTTCAGTACT+TGG + chr4.3:15607741-15607760 None:intergenic 40.0%
CTCCAGTAACATCAAGAACA+TGG - chr4.3:15608145-15608164 MS.gene023483:CDS 40.0%
CTGCAGAAAAATCTGTCTGA+AGG - chr4.3:15607561-15607580 MS.gene023483:intron 40.0%
CTGTCAGGAAATTGGCAATT+TGG - chr4.3:15607851-15607870 MS.gene023483:intron 40.0%
CTTTCACATGGCTAACCTAT+GGG - chr4.3:15606494-15606513 MS.gene023483:intron 40.0%
GACCTGAGAATGATGAAAGA+TGG - chr4.3:15605556-15605575 MS.gene023483:CDS 40.0%
GCTCCAGAGAATGAAGATTT+GGG + chr4.3:15607719-15607738 None:intergenic 40.0%
GCTTAAGAGCTTGGATTGAA+GGG + chr4.3:15607160-15607179 None:intergenic 40.0%
GGATGACTATGACTGTGAAT+AGG + chr4.3:15607063-15607082 None:intergenic 40.0%
GTTCTGTTGTAGATCCAGAA+AGG - chr4.3:15607088-15607107 MS.gene023483:intron 40.0%
TAGCCTCATTAGCCACATTT+CGG + chr4.3:15607932-15607951 None:intergenic 40.0%
TCTTCAGAAGACGTATGACA+TGG - chr4.3:15605114-15605133 MS.gene023483:CDS 40.0%
TCTTTCACATGGCTAACCTA+TGG - chr4.3:15606493-15606512 MS.gene023483:intron 40.0%
TGAAGCACAAACATAGACAC+CGG - chr4.3:15605618-15605637 MS.gene023483:CDS 40.0%
TTGATATCAGGTAGCACACA+GGG - chr4.3:15607516-15607535 MS.gene023483:intron 40.0%
! AAGTTCATATCTGAGACAGC+TGG + chr4.3:15607498-15607517 None:intergenic 40.0%
! AATAGGTTGGGAGAAGAACA+CGG + chr4.3:15605222-15605241 None:intergenic 40.0%
! ATCCATGGATTCGATTTTGC+GGG + chr4.3:15607319-15607338 None:intergenic 40.0%
! ATGACTGACACGGGAAATTT+TGG + chr4.3:15606375-15606394 None:intergenic 40.0%
! ATTAGCCACATTTCGGTTTG+TGG + chr4.3:15607925-15607944 None:intergenic 40.0%
! CATACGTGTCATTGTTGTGT+CGG - chr4.3:15605695-15605714 MS.gene023483:CDS 40.0%
! CCACAGATGAGATTGTTTCT+TGG - chr4.3:15605149-15605168 MS.gene023483:CDS 40.0%
! CTTCAGACAGATTTTTCTGC+AGG + chr4.3:15607563-15607582 None:intergenic 40.0%
! GTAGGTCTTAATTTTCGGTG+TGG - chr4.3:15605769-15605788 MS.gene023483:CDS 40.0%
! TATCAATCTAGCTCCACCAA+AGG - chr4.3:15607950-15607969 MS.gene023483:CDS 40.0%
! TGACTGACACGGGAAATTTT+GGG + chr4.3:15606374-15606393 None:intergenic 40.0%
! TGTGAATTGGTGGGTGATTT+AGG - chr4.3:15605795-15605814 MS.gene023483:CDS 40.0%
! TTCAGCTGGAAGATTTTCAG+CGG - chr4.3:15607205-15607224 MS.gene023483:intron 40.0%
! TTCTGAAGAATATACACCGC+AGG - chr4.3:15607034-15607053 MS.gene023483:intron 40.0%
!! CATACAACTCGTCCTTGTTT+TGG - chr4.3:15606233-15606252 MS.gene023483:CDS 40.0%
AAAAGCAGATCCTGAGCGTT+GGG - chr4.3:15606972-15606991 MS.gene023483:intron 45.0%
AACCTGCGTCTAACCATACA+TGG - chr4.3:15606323-15606342 MS.gene023483:intron 45.0%
ACACTAGACCTTGCAGATAC+TGG - chr4.3:15607633-15607652 MS.gene023483:intron 45.0%
ACAGGAATGCAGACAAGAAC+TGG - chr4.3:15607591-15607610 MS.gene023483:intron 45.0%
ACAGGGTTCAAACGAAGATG+AGG - chr4.3:15607533-15607552 MS.gene023483:intron 45.0%
ACCTGCGTCTAACCATACAT+GGG - chr4.3:15606324-15606343 MS.gene023483:intron 45.0%
ACTAGACCTTGCAGATACTG+GGG - chr4.3:15607635-15607654 MS.gene023483:intron 45.0%
ACTTCAGGAAGCAAATCTGG+CGG + chr4.3:15606794-15606813 None:intergenic 45.0%
AGAAGAACACGGGAGAATTC+AGG + chr4.3:15605211-15605230 None:intergenic 45.0%
AGACACATCATGACTGACAC+GGG + chr4.3:15606384-15606403 None:intergenic 45.0%
AGGCTGTTCAGACAATGAAG+AGG - chr4.3:15608058-15608077 MS.gene023483:CDS 45.0%
ATAGGAATTCATACTCGGCC+AGG - chr4.3:15607814-15607833 MS.gene023483:intron 45.0%
ATAGTGAGCAAGAAGAAGGG+CGG - chr4.3:15608108-15608127 MS.gene023483:CDS 45.0%
ATGTCTACGATGCAGAAGAC+AGG + chr4.3:15606595-15606614 None:intergenic 45.0%
ATTCTGCAGCATCTGGATCT+TGG - chr4.3:15605852-15605871 MS.gene023483:CDS 45.0%
CACTAGACCTTGCAGATACT+GGG - chr4.3:15607634-15607653 MS.gene023483:intron 45.0%
CAGACACATCATGACTGACA+CGG + chr4.3:15606385-15606404 None:intergenic 45.0%
CAGCATCTGGATCTTGGTAA+TGG - chr4.3:15605858-15605877 MS.gene023483:CDS 45.0%
CGTAGACATCTCAAGCATCT+AGG - chr4.3:15606606-15606625 MS.gene023483:intron 45.0%
CTGCAAGGTCTAGTGTTTCA+GGG + chr4.3:15607629-15607648 None:intergenic 45.0%
CTTGATATCAGGTAGCACAC+AGG - chr4.3:15607515-15607534 MS.gene023483:intron 45.0%
GACTGTGAATAGGTTTCCTG+CGG + chr4.3:15607053-15607072 None:intergenic 45.0%
GAGTCAAGAGTTAACGCTGA+TGG - chr4.3:15607876-15607895 MS.gene023483:intron 45.0%
GGCTCCAGAGAATGAAGATT+TGG + chr4.3:15607720-15607739 None:intergenic 45.0%
GTGCCCAAATCTTCATTCTC+TGG - chr4.3:15607713-15607732 MS.gene023483:intron 45.0%
GTGTTTCAGGGGTAAAAGCA+AGG + chr4.3:15607617-15607636 None:intergenic 45.0%
GTTCGCGAATGTGTCATGAA+CGG - chr4.3:15606285-15606304 MS.gene023483:intron 45.0%
TAAGAAAAGGCGATTGCCTC+AGG - chr4.3:15607353-15607372 MS.gene023483:intron 45.0%
TACGAAGCATGGACAATCCT+CGG + chr4.3:15605752-15605771 None:intergenic 45.0%
TCACAGTCATAGTCATCCTC+CGG - chr4.3:15607065-15607084 MS.gene023483:intron 45.0%
TCAGAAGACGTATGACATGG+TGG - chr4.3:15605117-15605136 MS.gene023483:CDS 45.0%
TCTGCAAGGTCTAGTGTTTC+AGG + chr4.3:15607630-15607649 None:intergenic 45.0%
TCTGGATCTACAACAGAACC+CGG + chr4.3:15607087-15607106 None:intergenic 45.0%
TCTTCATTGTCTGAACAGCC+TGG + chr4.3:15608059-15608078 None:intergenic 45.0%
TGAGACAGAAAAGCTTCAGC+TGG - chr4.3:15607191-15607210 MS.gene023483:intron 45.0%
TGCAAGGTCTAGTGTTTCAG+GGG + chr4.3:15607628-15607647 None:intergenic 45.0%
TTCCCGCAAAATCGAATCCA+TGG - chr4.3:15607314-15607333 MS.gene023483:intron 45.0%
! AACAGCCTGGTCTTTCAGTA+AGG + chr4.3:15608046-15608065 None:intergenic 45.0%
! ACGGGGTGAATGATGTGTTT+TGG - chr4.3:15608012-15608031 MS.gene023483:CDS 45.0%
! ATAGGTTGGGAGAAGAACAC+GGG + chr4.3:15605221-15605240 None:intergenic 45.0%
! CGGGGTGAATGATGTGTTTT+GGG - chr4.3:15608013-15608032 MS.gene023483:CDS 45.0%
! CTTCTTTGAGAAGGCTCTTC+AGG - chr4.3:15607269-15607288 MS.gene023483:intron 45.0%
! TGAGGTGTTTGTGTTGTGTC+CGG + chr4.3:15605640-15605659 None:intergenic 45.0%
AAGATGCCCCAGTATCTGCA+AGG + chr4.3:15607644-15607663 None:intergenic 50.0%
ACGTTACCTGAAGCCTCCTT+TGG + chr4.3:15607969-15607988 None:intergenic 50.0%
AGAACACGGGAGAATTCAGG+AGG + chr4.3:15605208-15605227 None:intergenic 50.0%
AGATCCAGAAAGGGCAGCAT+TGG - chr4.3:15607098-15607117 MS.gene023483:intron 50.0%
CACAGTCATAGTCATCCTCC+GGG - chr4.3:15607066-15607085 MS.gene023483:intron 50.0%
CTACGATGCAGAAGACAGGT+AGG + chr4.3:15606591-15606610 None:intergenic 50.0%
CTGTCTGAAGGAGAACTGAC+AGG - chr4.3:15607573-15607592 MS.gene023483:intron 50.0%
GAAAAGCAGATCCTGAGCGT+TGG - chr4.3:15606971-15606990 MS.gene023483:intron 50.0%
GAACACGGGAGAATTCAGGA+GGG + chr4.3:15605207-15605226 None:intergenic 50.0%
GAGGATTGTCCATGCTTCGT+AGG - chr4.3:15605751-15605770 MS.gene023483:CDS 50.0%
GATTGGATGGCATGGAGAAG+AGG - chr4.3:15607229-15607248 MS.gene023483:intron 50.0%
GCATGGACAATCCTCGGATT+AGG + chr4.3:15605746-15605765 None:intergenic 50.0%
GTCGCCCCAAATAAACTGTC+AGG - chr4.3:15607836-15607855 MS.gene023483:intron 50.0%
GTGTGGGTGTGTGAATTGGT+GGG - chr4.3:15605786-15605805 MS.gene023483:CDS 50.0%
TCCAAGTCAAAGCTGCTGCT+CGG - chr4.3:15607988-15608007 MS.gene023483:CDS 50.0%
TTACCTGAAGCCTCCTTTGG+TGG + chr4.3:15607966-15607985 None:intergenic 50.0%
! ACAGTTTATTTGGGGCGACC+TGG + chr4.3:15607835-15607854 None:intergenic 50.0%
! ATTGAGCTGACGGATGAAGC+TGG + chr4.3:15605263-15605282 None:intergenic 50.0%
! CAATCTAGCTCCACCAAAGG+AGG - chr4.3:15607953-15607972 MS.gene023483:CDS 50.0%
! GATTTTCAGCGGCGATTGGA+TGG - chr4.3:15607216-15607235 MS.gene023483:intron 50.0%
! GGAAGATTTTCAGCGGCGAT+TGG - chr4.3:15607212-15607231 MS.gene023483:intron 50.0%
! GGCTAACCTATGGGTGCTTT+TGG - chr4.3:15606503-15606522 MS.gene023483:intron 50.0%
! GGTTAGACGCAGGTTCTAAC+TGG + chr4.3:15606318-15606337 None:intergenic 50.0%
! GTCTTCTGAAGAAACGGTGC+CGG + chr4.3:15605106-15605125 None:intergenic 50.0%
! TTCGGTGTGGGTGTGTGAAT+TGG - chr4.3:15605782-15605801 MS.gene023483:CDS 50.0%
!! AGGGTTCCAAAAGCACCCAT+AGG + chr4.3:15606512-15606531 None:intergenic 50.0%
!! CTGGAGCCAAGTACTGAAGA+AGG - chr4.3:15607732-15607751 MS.gene023483:intron 50.0%
ACCAAGCTACCTTCGGCAAC+AGG + chr4.3:15607393-15607412 None:intergenic 55.0%
CAGGAAGCAAATCTGGCGGT+GGG + chr4.3:15606790-15606809 None:intergenic 55.0%
GAAGAAGGGCGGTCAGTTCA+TGG - chr4.3:15608119-15608138 MS.gene023483:CDS 55.0%
GATTAGGTGCGTCCTGACGT+CGG + chr4.3:15605730-15605749 None:intergenic 55.0%
GCCCATGTATGGTTAGACGC+AGG + chr4.3:15606328-15606347 None:intergenic 55.0%
GGATCTACAACAGAACCCGG+AGG + chr4.3:15607084-15607103 None:intergenic 55.0%
GGTGTGGGTGTGTGAATTGG+TGG - chr4.3:15605785-15605804 MS.gene023483:CDS 55.0%
TCAGGAAGCAAATCTGGCGG+TGG + chr4.3:15606791-15606810 None:intergenic 55.0%
TGCTCCAATGCTGCCCTTTC+TGG + chr4.3:15607105-15607124 None:intergenic 55.0%
TTGGCAAACTCCCAACGCTC+AGG + chr4.3:15606985-15607004 None:intergenic 55.0%
GCAGCGGCTGATGAGGATTG+TGG + chr4.3:15605061-15605080 None:intergenic 60.0%
GCCTGTTGCCGAAGGTAGCT+TGG - chr4.3:15607389-15607408 MS.gene023483:intron 60.0%
GCTCCACCAAAGGAGGCTTC+AGG - chr4.3:15607960-15607979 MS.gene023483:CDS 60.0%
GGCTGCACGTGATCAACCTG+AGG + chr4.3:15607372-15607391 None:intergenic 60.0%
GTCAAAGCTGCTGCTCGGCA+CGG - chr4.3:15607993-15608012 MS.gene023483:CDS 60.0%
GTCAGGACGCACCTAATCCG+AGG - chr4.3:15605732-15605751 MS.gene023483:CDS 60.0%
TCAAAGCTGCTGCTCGGCAC+GGG - chr4.3:15607994-15608013 MS.gene023483:CDS 60.0%
TCAGCGGCGATTGGATGGCA+TGG - chr4.3:15607221-15607240 MS.gene023483:intron 60.0%
! GCCGAGCAGCAGCTTTGACT+TGG + chr4.3:15607992-15608011 None:intergenic 60.0%
!! CATTGTCGGTGTCGGCGTTG+AGG + chr4.3:15605658-15605677 None:intergenic 60.0%
CAAAGCTGCTGCTCGGCACG+GGG - chr4.3:15607995-15608014 MS.gene023483:CDS 65.0%
CACGTGCAGCCTGTTGCCGA+AGG - chr4.3:15607381-15607400 MS.gene023483:intron 65.0%
! CGGTGTCAGACACCGACGTC+AGG - chr4.3:15605715-15605734 MS.gene023483:CDS 65.0%
ACCTCCTCCGCTTCCTCCGG+CGG + chr4.3:15605083-15605102 None:intergenic 70.0%
CGGACCTCCTCCGCTTCCTC+CGG + chr4.3:15605086-15605105 None:intergenic 70.0%
CGGAGGAAGCGGAGGAGGTC+CGG - chr4.3:15605084-15605103 MS.gene023483:CDS 70.0%
TCCTCATCAGCCGCTGCCGC+CGG - chr4.3:15605064-15605083 MS.gene023483:CDS 70.0%
TCATCAGCCGCTGCCGCCGG+AGG - chr4.3:15605067-15605086 MS.gene023483:CDS 75.0%
TCCGCTTCCTCCGGCGGCAG+CGG + chr4.3:15605077-15605096 None:intergenic 75.0%
TCCGGCGGCAGCGGCTGATG+AGG + chr4.3:15605068-15605087 None:intergenic 75.0%
! GCCGCCGGAGGAAGCGGAGG+AGG - chr4.3:15605079-15605098 MS.gene023483:CDS 80.0%
! GCCGCTGCCGCCGGAGGAAG+CGG - chr4.3:15605073-15605092 MS.gene023483:CDS 80.0%
! GCTGCCGCCGGAGGAAGCGG+AGG - chr4.3:15605076-15605095 MS.gene023483:CDS 80.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 15605046 15608184 15605046 ID=MS.gene023483
chr4.3 mRNA 15605046 15608184 15605046 ID=MS.gene023483.t1;Parent=MS.gene023483
chr4.3 exon 15607942 15608184 15607942 ID=MS.gene023483.t1.exon1;Parent=MS.gene023483.t1
chr4.3 CDS 15607942 15608184 15607942 ID=cds.MS.gene023483.t1;Parent=MS.gene023483.t1
chr4.3 exon 15605046 15606266 15605046 ID=MS.gene023483.t1.exon2;Parent=MS.gene023483.t1
chr4.3 CDS 15605046 15606266 15605046 ID=cds.MS.gene023483.t1;Parent=MS.gene023483.t1
Gene Sequence

>MS.gene023483

ATGAATTCTGCACCACAATCCTCATCAGCCGCTGCCGCCGGAGGAAGCGGAGGAGGTCCGGCACCGTTTCTTCAGAAGACGTATGACATGGTGGATGATTCCACCACAGATGAGATTGTTTCTTGGAGCTCTGATAACAAAAGCTTCATTGTTTGGAACCCTCCTGAATTCTCCCGTGTTCTTCTCCCAACCTATTTCAAGCACAACAATTTCTCCAGCTTCATCCGTCAGCTCAATACCTATGTAAGTCAATTCATGCTATACGCTTCTTTTGATTGTTTCATTGTTATTTTGTATGATCAATTAGTTATTGTTTTTGTTTGATTGTTTGTTGTATTTGTATGATTTGATTTCATTGTGTCTTAGTCGAGTTTCAATTAGTGGATATTGATTGTTATGATTATGATCATTAAGAGATTGATGAAAAAATCTGCTTAGTAAGATAGTAGGAATTATGAACAACTTTAGATTTGGATTTCATTGAGTCTAATTGGAGTTGCAAAATGTTGGGACCTGAGAATGATGAAAGATGGATGAGATATTATATAGTCTTGTACGGCACTTTTATGCTATGAAGCACAAACATAGACACCGGACACAACACAAACACCTCAACGCCGACACCGACAATGACATAATTCAGTGTTATCATACGTGTCATTGTTGTGTCGGTGTCAGACACCGACGTCAGGACGCACCTAATCCGAGGATTGTCCATGCTTCGTAGGTCTTAATTTTCGGTGTGGGTGTGTGAATTGGTGGGTGATTTAGGACTCTAAATGCACTCAAGAAAACAATCAAAAAAAATTCTGCAGCATCTGGATCTTGGTAATGGTACATCCAGTCATGAATAAAACCATCAATTTAGTCTCTGAATATCACACTATTTCTGGTTTATTTCCTGAACTATATAAATATGATATGATGATATGGAAATAAACCAGAAATAGTGTGATATGATGATACCCGGAAAACAAAAATGTGTCAATTTAGTCTTTGAAGTATATGGAAATTCGTCAATTTTGTCTCTAACATCTTAATTGTTGTGACTTGTGACTAAATTGACGGGTTTCATATGCTTTAGAGACTACTTATCATGTTTCTATAGGGTAGGGACTAAATTTGAGATAGGGTGATAATTCAGGGACTAAATTGATGGTTTACAATCAGTGATCAAATAATTGCGCCATACAACTCGTCCTTGTTTTGGTAAAAGAGATAGAGCACTACAAAAAAGAAGTTCGCGAATGTGTCATGAACGGAAAATGACCAGTTAGAACCTGCGTCTAACCATACATGGGCAATTATTGAATTTAAAGGATTTACCCAAAATTTCCCGTGTCAGTCATGATGTGTCTGCGATGTTATTTCTTGTGACATTTCCATGAAAAAAAAAAGTTAGCTTGTTTTTCTTTTATCATTATACAAATATTACCTTATTTTCAAATCTTTCACATGGCTAACCTATGGGTGCTTTTGGAACCCTAAATGTTAAATTTTCCCATTAAGTCCATACTATAACCCAGATTTTTATTGTTTAATCCTACCTGTCTTCTGCATCGTAGACATCTCAAGCATCTAGGTTTTCATTTATTGATTGATATGATGATACCCGGAAAACAAAAATGGCAAACATCCTGTATTGTAAATTTTTATTGAACTTGTTGAAATTGATATCTAACTCTTAGATAGGATTGAAAAATAGAAATCATGCACTTATGGCAATGATTAAAAACTAAGGCCCACCGCCAGATTTGCTTCCTGAAGTTTTTATGTGTGTAATGAAGAATATTCTTGTAAAGATTTAATGGTAAATCGTTCAAAGAAGTTTGCAGGTCCTATGGCTTTAATGATAAACAATTGTTTATGAATTTATGTTTTAATTTGTTATGGTTTATTTATATGTGCTTTTTATCAGGGATTTCGAAAAGCAGATCCTGAGCGTTGGGAGTTTGCCAATGAAGAATTTATAAAAGATCAAAAACATCTTCTGAAGAATATACACCGCAGGAAACCTATTCACAGTCATAGTCATCCTCCGGGTTCTGTTGTAGATCCAGAAAGGGCAGCATTGGAGCAAGAAATAGAGAAGCTGTCTCGCGAGAAAAATGCCCTTCAATCCAAGCTCTTAAGCTACAGTTATCTTGAGACAGAAAAGCTTCAGCTGGAAGATTTTCAGCGGCGATTGGATGGCATGGAGAAGAGGCAGACAAATTTGCAGAACTTCTTTGAGAAGGCTCTTCAGGATTCTTTTATTGTTGAACTTCTTTCCCGCAAAATCGAATCCATGGATTTGGCAGCTTATAATAAGAAAAGGCGATTGCCTCAGGTTGATCACGTGCAGCCTGTTGCCGAAGGTAGCTTGGTTGACAATCCTAGCAATTTCAGACTGGAATTTGGGAATGTATTCCCTCAAGATATCTCAAATAAACTCAGACTAGAATTGTCACCAGCTGTCTCAGATATGAACTTGATATCAGGTAGCACACAGGGTTCAAACGAAGATGAGGAAAGCCTGCAGAAAAATCTGTCTGAAGGAGAACTGACAGGAATGCAGACAAGAACTGGCCTTGCTTTTACCCCTGAAACACTAGACCTTGCAGATACTGGGGCATCTTTTACTTTTAACATGGATTCGTGTTTATCACAAAGAGCAACTACTACTGAGTGCCCAAATCTTCATTCTCTGGAGCCAAGTACTGAAGAAGGTGATAGTCATATATCCTGCCAACTAAATTTAACTCTGGCATCTTGTACATTGGAATTCAATAGGAATTCATACTCGGCCAGGTCGCCCCAAATAAACTGTCAGGAAATTGGCAATTTGGCAGAGTCAAGAGTTAACGCTGATGGTAAAGAATCTGAAATTGGAGTTTCCACAAACCGAAATGTGGCTAATGAGGCTATCAATCTAGCTCCACCAAAGGAGGCTTCAGGTAACGTCCAAGTCAAAGCTGCTGCTCGGCACGGGGTGAATGATGTGTTTTGGGAAAATTTCCTTACTGAAAGACCAGGCTGTTCAGACAATGAAGAGGCAATATCCAACTATCGAGCAATTCCAAATAGTGAGCAAGAAGAAGGGCGGTCAGTTCATGGAATCTCCAGTAACATCAAGAACATGGATAATCTCACCCTTTGA
Protein sequence

>MS.gene023483.t1

MNSAPQSSSAAAAGGSGGGPAPFLQKTYDMVDDSTTDEIVSWSSDNKSFIVWNPPEFSRVLLPTYFKHNNFSSFIRQLNTYGFRKADPERWEFANEEFIKDQKHLLKNIHRRKPIHSHSHPPGSVVDPERAALEQEIEKLSREKNALQSKLLSYSYLETEKLQLEDFQRRLDGMEKRQTNLQNFFEKALQDSFIVELLSRKIESMDLAAYNKKRRLPQVDHVQPVAEGSLVDNPSNFRLEFGNVFPQDISNKLRLELSPAVSDMNLISGSTQGSNEDEESLQKNLSEGELTGMQTRTGLAFTPETLDLADTGASFTFNMDSCLSQRATTTECPNLHSLEPSTEEGDSHISCQLNLTLASCTLEFNRNSYSARSPQINCQEIGNLAESRVNADGKESEIGVSTNRNVANEAINLAPPKEASGNVQVKAAARHGVNDVFWENFLTERPGCSDNEEAISNYRAIPNSEQEEGRSVHGISSNIKNMDNLTL