AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene02354

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene02354.t1 MTR_2g023930 96.803 563 8 3 1 563 1 553 0.0 1115
MS.gene02354.t1 MTR_4g132430 55.031 487 145 21 59 525 27 459 2.10e-139 413
MS.gene02354.t1 MTR_2g088000 46.461 551 196 18 62 555 81 589 1.23e-125 382
MS.gene02354.t1 MTR_4g132430 57.754 374 97 15 164 525 1 325 4.73e-115 346
MS.gene02354.t1 MTR_3g053330 43.388 484 196 14 60 536 32 444 1.08e-107 331
MS.gene02354.t1 MTR_4g049760 40.755 530 223 14 67 550 35 519 1.06e-94 300
MS.gene02354.t1 MTR_4g049790 39.173 508 230 16 67 543 60 519 4.86e-94 298
MS.gene02354.t1 MTR_4g047580 38.417 518 247 18 67 552 30 507 2.87e-90 288
MS.gene02354.t1 MTR_7g110720 40.562 498 164 16 67 547 30 412 1.24e-85 273
MS.gene02354.t1 MTR_7g110720 51.399 286 67 8 276 547 158 385 4.37e-73 239
MS.gene02354.t1 MTR_7g009730 32.391 460 246 10 150 552 47 498 4.36e-56 198
MS.gene02354.t1 MTR_2g045360 33.886 422 183 14 143 542 68 415 1.27e-55 193
MS.gene02354.t1 MTR_4g107970 36.401 489 235 16 117 537 43 523 2.49e-46 172
MS.gene02354.t1 MTR_4g107970 37.723 448 204 15 157 537 7 446 8.85e-46 169
MS.gene02354.t1 MTR_4g094412 39.103 312 160 9 92 388 19 315 3.66e-45 166
MS.gene02354.t1 MTR_4g094412 37.457 291 152 9 92 367 28 303 6.04e-45 166
MS.gene02354.t1 MTR_6g038890 53.548 155 44 7 185 337 90 218 1.43e-36 135
MS.gene02354.t1 MTR_5g044695 90.476 63 6 0 275 337 45 107 3.12e-35 128
MS.gene02354.t1 MTR_1g013760 33.191 235 110 5 150 383 28 216 1.90e-28 115
MS.gene02354.t1 MTR_4g007060 38.816 152 69 4 282 433 103 230 3.57e-27 111
MS.gene02354.t1 MTR_4g007060 38.816 152 69 4 282 433 137 264 4.54e-27 112
MS.gene02354.t1 MTR_3g056100 31.228 285 141 10 112 369 220 476 2.16e-25 110
MS.gene02354.t1 MTR_3g056100 31.228 285 141 10 112 369 76 332 2.82e-25 109
MS.gene02354.t1 MTR_3g056100 32.364 275 138 11 112 369 220 463 6.75e-25 109
MS.gene02354.t1 MTR_5g094430 55.000 80 35 1 290 369 235 313 7.59e-25 107
MS.gene02354.t1 MTR_5g094430 55.000 80 35 1 290 369 213 291 7.80e-25 107
MS.gene02354.t1 MTR_3g056100 32.364 275 138 11 112 369 76 319 1.05e-24 107
MS.gene02354.t1 MTR_7g011820 35.294 170 104 3 217 382 317 484 2.47e-24 107
MS.gene02354.t1 MTR_5g094430 55.000 80 35 1 290 369 347 425 2.67e-24 107
MS.gene02354.t1 MTR_1g013790 45.918 98 51 1 302 397 96 193 2.91e-24 102
MS.gene02354.t1 MTR_3g106060 50.588 85 42 0 292 376 123 207 4.01e-24 103
MS.gene02354.t1 MTR_7g109800 48.421 95 44 2 291 385 129 218 1.66e-23 101
MS.gene02354.t1 MTR_3g009470 50.000 90 44 1 280 369 468 556 1.71e-23 105
MS.gene02354.t1 MTR_3g009470 44.086 93 50 2 276 368 249 339 1.63e-16 83.6
MS.gene02354.t1 MTR_3g031220 53.165 79 36 1 289 367 347 424 2.63e-23 103
MS.gene02354.t1 MTR_3g031220 30.872 149 70 4 221 369 143 258 3.09e-11 66.2
MS.gene02354.t1 MTR_4g013260 53.165 79 36 1 289 367 318 395 3.12e-23 103
MS.gene02354.t1 MTR_4g013260 42.667 75 40 2 293 367 172 243 3.37e-14 75.5
MS.gene02354.t1 MTR_5g074400 53.086 81 37 1 289 369 402 481 4.95e-23 103
MS.gene02354.t1 MTR_5g074400 51.667 60 27 2 308 367 244 301 1.81e-13 73.6
MS.gene02354.t1 MTR_7g071120 52.326 86 40 1 284 369 301 385 5.16e-23 102
MS.gene02354.t1 MTR_5g042920 45.918 98 52 1 289 386 302 398 2.27e-22 100
MS.gene02354.t1 MTR_5g042920 39.583 96 56 2 308 403 152 245 4.99e-13 71.6
MS.gene02354.t1 MTR_2g105060 51.190 84 36 2 289 367 71 154 3.28e-22 96.3
MS.gene02354.t1 MTR_2g105060 51.190 84 36 2 289 367 146 229 3.83e-22 97.8
MS.gene02354.t1 MTR_4g082580 46.000 100 50 2 284 380 255 353 4.45e-22 99.0
MS.gene02354.t1 MTR_5g097490 45.631 103 49 3 282 379 222 322 4.56e-22 99.0
MS.gene02354.t1 MTR_5g097490 41.250 80 45 2 305 384 90 167 3.01e-11 65.9
MS.gene02354.t1 MTR_4g094588 45.055 91 49 1 294 384 165 254 4.90e-22 97.8
MS.gene02354.t1 MTR_1g015140 42.424 99 55 2 267 365 63 159 7.33e-22 92.8
MS.gene02354.t1 MTR_2g033820 44.348 115 53 4 291 401 187 294 7.63e-22 98.2
MS.gene02354.t1 MTR_7g080020 52.500 80 37 1 290 369 476 554 7.91e-22 100
MS.gene02354.t1 MTR_7g080020 50.000 60 28 2 308 367 281 338 2.38e-11 67.0
MS.gene02354.t1 MTR_7g028415 53.521 71 32 1 296 366 82 151 8.55e-22 93.2
MS.gene02354.t1 MTR_7g028710 53.521 71 32 1 296 366 82 151 8.55e-22 93.2
MS.gene02354.t1 MTR_7g080000 52.500 80 37 1 290 369 415 493 1.24e-21 99.8
MS.gene02354.t1 MTR_7g080000 47.692 65 32 2 303 367 230 292 1.32e-11 67.8
MS.gene02354.t1 MTR_7g079010 35.260 173 98 5 195 365 38 198 2.39e-21 93.2
MS.gene02354.t1 MTR_1g086790 43.269 104 57 2 291 393 142 244 8.50e-21 94.0
MS.gene02354.t1 MTR_7g100510 41.837 98 56 1 270 367 324 420 1.98e-20 94.4
MS.gene02354.t1 MTR_7g100510 51.667 60 27 2 308 367 190 247 3.27e-12 68.9
MS.gene02354.t1 MTR_7g109600 45.361 97 44 2 290 380 30 123 2.54e-20 91.3
MS.gene02354.t1 MTR_5g043880 50.000 78 38 1 287 364 104 180 8.98e-20 90.1
MS.gene02354.t1 MTR_4g122530 47.619 84 42 2 291 374 192 273 1.37e-19 91.7
MS.gene02354.t1 MTR_3g104750 43.000 100 56 1 266 365 63 161 2.51e-19 85.9
MS.gene02354.t1 MTR_5g091390 50.000 74 36 1 294 367 144 216 3.21e-19 89.0
MS.gene02354.t1 MTR_4g130900 49.367 79 37 2 291 367 343 420 4.94e-19 90.9
MS.gene02354.t1 MTR_1g009613 48.649 74 38 0 291 364 246 319 5.89e-19 89.0
MS.gene02354.t1 MTR_5g016610 50.000 76 38 0 291 366 183 258 6.62e-19 87.4
MS.gene02354.t1 MTR_8g087000 59.016 61 25 0 307 367 77 137 8.21e-19 86.7
MS.gene02354.t1 MTR_8g007270 48.000 75 38 1 290 364 137 210 8.29e-19 85.9
MS.gene02354.t1 MTR_8g087000 59.016 61 25 0 307 367 76 136 8.86e-19 86.3
MS.gene02354.t1 MTR_4g094908 49.367 79 40 0 291 369 250 328 1.05e-18 88.2
MS.gene02354.t1 MTR_2g032030 51.316 76 37 0 307 382 267 342 1.97e-18 88.6
MS.gene02354.t1 MTR_1g070455 46.429 84 45 0 291 374 277 360 2.30e-18 87.4
MS.gene02354.t1 MTR_2g016770 56.452 62 27 0 307 368 35 96 2.64e-18 84.3
MS.gene02354.t1 MTR_2g083870 54.286 70 32 0 298 367 71 140 3.80e-18 85.1
MS.gene02354.t1 MTR_3g095080 46.667 75 39 1 290 364 127 200 4.05e-18 84.0
MS.gene02354.t1 MTR_2g032030 51.316 76 37 0 307 382 267 342 4.07e-18 87.4
MS.gene02354.t1 MTR_2g016770 56.452 62 27 0 307 368 27 88 4.12e-18 83.6
MS.gene02354.t1 MTR_3g095080 46.667 75 39 1 290 364 151 224 4.17e-18 84.3
MS.gene02354.t1 MTR_3g095040 47.297 74 38 1 294 367 105 177 7.63e-18 82.8
MS.gene02354.t1 MTR_0117s0040 45.652 92 47 1 273 364 43 131 9.59e-18 83.6
MS.gene02354.t1 MTR_8g096730 45.570 79 42 1 292 370 55 132 1.08e-17 80.5
MS.gene02354.t1 MTR_4g127040 50.000 74 37 0 291 364 229 302 1.93e-17 84.0
MS.gene02354.t1 MTR_2g024350 34.074 135 79 3 302 426 3 137 2.14e-17 82.0
MS.gene02354.t1 MTR_7g079040 50.000 74 37 0 304 377 151 224 2.27e-17 84.0
MS.gene02354.t1 MTR_1g077780 43.478 92 50 2 291 382 46 135 2.99e-17 79.3
MS.gene02354.t1 MTR_3g009470 44.086 93 50 2 276 368 249 339 7.61e-17 84.0
MS.gene02354.t1 MTR_8g092140 46.053 76 39 2 290 364 142 216 9.23e-17 80.1
MS.gene02354.t1 MTR_3g108960 47.297 74 39 0 291 364 298 371 1.09e-16 82.8
MS.gene02354.t1 MTR_8g028565 36.036 111 66 1 272 377 115 225 1.09e-16 82.0
MS.gene02354.t1 MTR_8g092010 45.946 74 39 1 294 367 95 167 2.66e-16 77.8
MS.gene02354.t1 MTR_8g098945 44.444 72 40 0 306 377 128 199 1.58e-15 77.4
MS.gene02354.t1 MTR_2g024380 45.455 66 36 0 302 367 246 311 1.80e-15 79.3
MS.gene02354.t1 MTR_1g099600 45.205 73 40 0 305 377 183 255 4.87e-15 76.6
MS.gene02354.t1 MTR_4g007060 42.857 63 36 0 282 344 137 199 1.57e-14 73.9
MS.gene02354.t1 MTR_7g062220 37.190 121 59 3 267 372 70 188 1.99e-14 74.7
MS.gene02354.t1 MTR_6g086555 46.667 75 38 2 294 367 193 266 2.95e-14 75.5
MS.gene02354.t1 MTR_1g078260 43.056 72 39 2 294 364 234 304 3.20e-13 72.4
MS.gene02354.t1 MTR_3g090860 54.237 59 25 1 306 362 132 190 5.57e-13 70.9
MS.gene02354.t1 MTR_5g067680 42.529 87 38 2 308 382 203 289 8.07e-13 70.5
MS.gene02354.t1 MTR_8g027860 49.275 69 28 2 306 367 135 203 6.51e-12 67.8
MS.gene02354.t1 MTR_3g031220 30.872 149 70 4 221 369 143 258 1.64e-11 66.6
MS.gene02354.t1 MTR_5g044695 42.735 117 43 6 192 306 8 102 2.00e-11 61.2
MS.gene02354.t1 MTR_6g053200 31.373 102 68 2 268 367 289 390 6.54e-11 65.5
MS.gene02354.t1 MTR_8g069935 31.461 89 49 1 291 367 303 391 6.95e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene02354.t1 AT1G62300 50.906 607 186 29 1 550 1 552 5.75e-155 455
MS.gene02354.t1 AT4G04450 52.199 523 158 23 62 536 25 503 2.19e-140 417
MS.gene02354.t1 AT4G04450 54.967 453 119 21 125 536 1 409 1.58e-128 383
MS.gene02354.t1 AT4G22070 53.196 485 166 20 43 479 1 472 8.35e-120 364
MS.gene02354.t1 AT4G22070 53.196 485 166 20 43 479 1 472 8.35e-120 364
MS.gene02354.t1 AT4G22070 53.196 485 166 20 43 479 1 472 8.35e-120 364
MS.gene02354.t1 AT4G22070 53.196 485 166 20 43 479 1 472 8.35e-120 364
MS.gene02354.t1 AT4G01720 38.763 485 192 15 67 533 46 443 3.20e-65 221
MS.gene02354.t1 AT5G15130 33.906 466 239 13 143 559 35 480 2.41e-50 182
MS.gene02354.t1 AT5G15130 34.174 436 224 12 151 537 1 422 7.12e-49 177
MS.gene02354.t1 AT1G68150 40.711 253 108 8 146 388 96 316 8.28e-49 174
MS.gene02354.t1 AT1G18860 32.990 485 244 12 132 538 30 511 3.11e-45 167
MS.gene02354.t1 AT1G69810 33.846 325 191 8 128 437 14 329 2.30e-41 154
MS.gene02354.t1 AT1G69810 53.691 149 63 3 290 437 128 271 5.81e-37 140
MS.gene02354.t1 AT4G31800 34.156 243 123 5 145 385 47 254 1.41e-31 124
MS.gene02354.t1 AT1G80840 32.883 222 94 5 150 367 36 206 4.76e-29 117
MS.gene02354.t1 AT4G31800 50.505 99 44 2 292 385 91 189 7.00e-25 103
MS.gene02354.t1 AT2G38470 49.451 91 45 1 289 379 344 433 8.88e-25 108
MS.gene02354.t1 AT4G26640 53.846 78 35 1 290 367 188 264 6.45e-24 104
MS.gene02354.t1 AT4G26640 37.363 91 55 2 277 367 5 93 5.54e-13 71.2
MS.gene02354.t1 AT4G26640 53.846 78 35 1 290 367 188 264 6.45e-24 104
MS.gene02354.t1 AT4G26640 37.363 91 55 2 277 367 5 93 5.54e-13 71.2
MS.gene02354.t1 AT4G26640 53.846 78 35 1 290 367 188 264 6.45e-24 104
MS.gene02354.t1 AT4G26640 37.363 91 55 2 277 367 5 93 5.54e-13 71.2
MS.gene02354.t1 AT4G26640 53.846 78 35 1 290 367 188 264 6.45e-24 104
MS.gene02354.t1 AT4G26640 37.363 91 55 2 277 367 5 93 5.54e-13 71.2
MS.gene02354.t1 AT2G25000 48.864 88 45 0 285 372 81 168 1.16e-23 100
MS.gene02354.t1 AT2G25000 48.864 88 45 0 285 372 81 168 1.16e-23 100
MS.gene02354.t1 AT2G25000 46.237 93 50 0 280 372 98 190 1.33e-23 100
MS.gene02354.t1 AT4G26640 53.846 78 35 1 290 367 292 368 1.49e-23 104
MS.gene02354.t1 AT4G26640 53.846 78 35 1 290 367 324 400 1.58e-23 104
MS.gene02354.t1 AT1G29860 36.774 155 86 4 248 396 82 230 2.06e-23 100
MS.gene02354.t1 AT1G13960 53.571 84 38 1 284 367 233 315 2.08e-23 102
MS.gene02354.t1 AT1G13960 51.667 60 27 2 308 367 77 134 2.05e-12 69.3
MS.gene02354.t1 AT4G26640 53.846 78 35 1 290 367 364 440 2.08e-23 104
MS.gene02354.t1 AT2G25000 48.864 88 45 0 285 372 124 211 2.14e-23 100
MS.gene02354.t1 AT1G13960 53.571 84 38 1 284 367 386 468 2.66e-23 103
MS.gene02354.t1 AT1G13960 51.667 60 27 2 308 367 230 287 1.47e-12 70.5
MS.gene02354.t1 AT5G26170 51.389 72 34 1 293 364 99 169 4.34e-23 97.1
MS.gene02354.t1 AT5G56270 49.438 89 44 1 281 369 461 548 5.15e-23 103
MS.gene02354.t1 AT5G56270 50.820 61 28 2 308 368 274 332 5.77e-12 68.9
MS.gene02354.t1 AT5G49520 51.948 77 36 1 291 367 205 280 9.82e-23 100
MS.gene02354.t1 AT4G18170 48.913 92 45 2 277 367 141 231 1.01e-22 99.8
MS.gene02354.t1 AT2G03340 51.163 86 41 1 284 369 392 476 2.02e-22 101
MS.gene02354.t1 AT2G03340 51.667 60 27 2 308 367 251 308 5.96e-13 71.6
MS.gene02354.t1 AT5G07100 47.126 87 45 1 281 367 115 200 3.07e-22 95.9
MS.gene02354.t1 AT5G07100 41.096 73 42 1 308 380 25 96 2.08e-11 64.3
MS.gene02354.t1 AT5G07100 47.126 87 45 1 281 367 115 200 3.07e-22 95.9
MS.gene02354.t1 AT5G07100 41.096 73 42 1 308 380 25 96 2.08e-11 64.3
MS.gene02354.t1 AT5G07100 47.126 87 45 1 281 367 115 200 3.07e-22 95.9
MS.gene02354.t1 AT5G07100 41.096 73 42 1 308 380 25 96 2.08e-11 64.3
MS.gene02354.t1 AT5G07100 47.126 87 45 1 281 367 115 200 3.07e-22 95.9
MS.gene02354.t1 AT5G07100 41.096 73 42 1 308 380 25 96 2.08e-11 64.3
MS.gene02354.t1 AT2G04880 44.828 87 47 1 286 372 262 347 3.33e-22 100
MS.gene02354.t1 AT2G04880 46.970 66 33 2 305 370 109 172 3.14e-12 69.3
MS.gene02354.t1 AT2G04880 44.828 87 47 1 286 372 286 371 4.79e-22 100
MS.gene02354.t1 AT2G04880 46.970 66 33 2 305 370 109 172 3.93e-12 69.3
MS.gene02354.t1 AT5G07100 47.126 87 45 1 281 367 208 293 5.28e-22 97.4
MS.gene02354.t1 AT5G07100 41.096 73 42 1 308 380 118 189 3.83e-11 65.1
MS.gene02354.t1 AT1G64000 48.235 85 43 1 281 365 88 171 6.46e-22 94.4
MS.gene02354.t1 AT5G46350 48.864 88 43 2 294 380 170 256 1.08e-21 96.7
MS.gene02354.t1 AT3G01080 47.619 84 43 1 284 367 283 365 3.41e-21 96.7
MS.gene02354.t1 AT3G01080 51.667 60 27 2 308 367 168 225 2.36e-11 66.2
MS.gene02354.t1 AT3G01080 47.619 84 43 1 284 367 321 403 4.01e-21 97.1
MS.gene02354.t1 AT3G01080 51.667 60 27 2 308 367 206 263 2.29e-11 66.6
MS.gene02354.t1 AT2G30250 51.250 80 38 1 290 369 311 389 6.55e-21 95.5
MS.gene02354.t1 AT2G47260 43.243 111 58 2 283 389 150 259 7.81e-21 94.4
MS.gene02354.t1 AT2G46130 48.780 82 41 1 284 365 7 87 1.27e-20 87.8
MS.gene02354.t1 AT1G55600 44.444 90 49 1 280 369 280 368 1.73e-20 95.1
MS.gene02354.t1 AT5G13080 43.000 100 56 1 267 366 27 125 2.07e-20 88.2
MS.gene02354.t1 AT4G30935 44.554 101 45 3 291 383 315 412 3.81e-20 94.0
MS.gene02354.t1 AT4G26440 45.545 101 52 2 291 391 356 453 5.72e-20 94.0
MS.gene02354.t1 AT2G30590 50.000 82 40 1 291 371 297 378 1.04e-19 91.7
MS.gene02354.t1 AT1G29280 51.429 70 34 0 298 367 65 134 1.41e-19 89.0
MS.gene02354.t1 AT3G01970 43.137 102 57 1 263 364 21 121 1.49e-19 85.9
MS.gene02354.t1 AT1G69310 42.353 85 48 1 280 364 120 203 1.87e-19 89.4
MS.gene02354.t1 AT1G69310 42.353 85 48 1 280 364 120 203 1.87e-19 89.4
MS.gene02354.t1 AT1G69310 42.353 85 48 1 280 364 120 203 1.87e-19 89.4
MS.gene02354.t1 AT4G31800 31.683 202 101 5 145 344 47 213 1.93e-19 88.2
MS.gene02354.t1 AT5G41570 55.556 72 31 1 294 365 85 155 2.32e-19 86.3
MS.gene02354.t1 AT2G44745 40.909 88 51 1 277 364 115 201 2.54e-19 87.4
MS.gene02354.t1 AT2G23320 57.627 59 25 0 308 366 241 299 4.48e-19 89.0
MS.gene02354.t1 AT5G64810 47.887 71 36 1 294 364 97 166 4.70e-19 85.9
MS.gene02354.t1 AT3G62340 50.000 78 38 1 294 371 105 181 1.16e-18 87.0
MS.gene02354.t1 AT4G24240 50.000 76 38 0 291 366 265 340 1.16e-18 88.2
MS.gene02354.t1 AT5G28650 48.649 74 38 0 291 364 246 319 1.94e-18 87.0
MS.gene02354.t1 AT3G58710 52.857 70 33 0 298 367 61 130 2.46e-18 85.9
MS.gene02354.t1 AT3G58710 52.857 70 33 0 298 367 62 131 2.50e-18 85.9
MS.gene02354.t1 AT4G39410 43.902 82 45 1 283 364 199 279 2.76e-18 86.3
MS.gene02354.t1 AT2G34830 48.193 83 42 1 293 374 200 282 9.42e-18 86.3
MS.gene02354.t1 AT1G30650 48.193 83 42 1 293 374 202 284 1.11e-17 86.3
MS.gene02354.t1 AT3G04670 47.297 74 39 0 291 364 246 319 1.15e-17 84.7
MS.gene02354.t1 AT2G24570 48.649 74 38 0 291 364 227 300 1.24e-17 84.7
MS.gene02354.t1 AT2G34830 48.193 83 42 1 293 374 209 291 1.31e-17 85.9
MS.gene02354.t1 AT4G23550 45.679 81 44 0 302 382 135 215 2.22e-17 83.6
MS.gene02354.t1 AT4G31550 47.297 74 39 0 291 364 230 303 2.52e-17 84.0
MS.gene02354.t1 AT4G31550 47.297 74 39 0 291 364 229 302 2.53e-17 83.6
MS.gene02354.t1 AT4G01250 49.296 71 36 0 307 377 128 198 3.43e-17 82.8
MS.gene02354.t1 AT2G37260 49.333 75 34 2 302 373 264 337 7.02e-17 82.8
MS.gene02354.t1 AT2G37260 42.105 76 42 2 308 383 86 159 9.22e-14 73.2
MS.gene02354.t1 AT2G37260 49.333 75 34 2 302 373 262 335 7.20e-17 82.8
MS.gene02354.t1 AT2G37260 42.105 76 42 2 308 383 84 157 9.15e-14 73.2
MS.gene02354.t1 AT5G52830 46.753 77 41 0 301 377 159 235 1.13e-16 82.0
MS.gene02354.t1 AT2G37260 49.333 75 34 2 302 373 344 417 1.36e-16 82.8
MS.gene02354.t1 AT2G37260 42.105 76 42 2 308 383 166 239 1.47e-13 73.2
MS.gene02354.t1 AT2G46130 45.122 82 40 2 284 365 7 83 9.80e-16 73.6
MS.gene02354.t1 AT1G69310 38.824 85 47 2 280 364 120 199 1.67e-14 74.7
MS.gene02354.t1 AT5G45050 54.098 61 28 0 307 367 1180 1240 2.92e-14 76.6
MS.gene02354.t1 AT5G45050 50.000 76 36 1 292 367 1028 1101 3.06e-14 76.6
MS.gene02354.t1 AT5G45050 54.098 61 28 0 307 367 1152 1212 3.06e-14 76.6
MS.gene02354.t1 AT2G21900 43.939 66 36 1 302 367 104 168 6.92e-14 71.2
MS.gene02354.t1 AT5G45260 39.216 102 55 3 283 382 1189 1285 3.28e-13 73.6
MS.gene02354.t1 AT5G43290 41.667 72 40 2 294 364 100 170 3.95e-13 70.5
MS.gene02354.t1 AT3G01080 51.667 60 27 2 308 367 206 263 1.00e-11 67.0
MS.gene02354.t1 AT2G46400 41.772 79 44 1 286 362 83 161 1.06e-11 66.2
MS.gene02354.t1 AT2G40740 47.297 74 34 2 308 376 174 247 2.83e-11 65.1
MS.gene02354.t1 AT2G40740 47.297 74 34 2 308 376 183 256 4.06e-11 64.7

Find 113 sgRNAs with CRISPR-Local

Find 149 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGCCTTGTGTTTCTGATTC+TGG 0.066609 2.4:-63418841 None:intergenic
ATAGCTCTTGCTAATAAATT+TGG 0.191323 2.4:-63419578 None:intergenic
CTTTGAAATTGTAATGGATT+TGG 0.230411 2.4:-63419686 None:intergenic
TTTGAAATTGTAATGGATTT+GGG 0.275227 2.4:-63419685 None:intergenic
TTGACAGGAAATCCTAAAAT+AGG 0.296916 2.4:-63417557 None:intergenic
GCCGCTATCTCCTCCATTAT+TGG 0.300387 2.4:+63419974 MS.gene02354:CDS
GCGAGAACAGCGGTGAAATT+AGG 0.306985 2.4:-63419950 None:intergenic
TGAGAGTGAGATATTGGAAT+TGG 0.324537 2.4:-63417479 None:intergenic
GTTGCTGCTGCTGTTGTTGT+TGG 0.336978 2.4:-63419868 None:intergenic
AAAGGGTGAGAGTGAGATAT+TGG 0.336997 2.4:-63417485 None:intergenic
GGATGCCAATGGAGGAAATA+TGG 0.352069 2.4:+63419095 MS.gene02354:CDS
CGCCGTTGGTGTTACGGGTA+AGG 0.353888 2.4:-63417580 None:intergenic
TAAATCCAATATCATCAAAA+AGG 0.354383 2.4:+63417694 MS.gene02354:CDS
GTCTTCGCCGTTGGTGTTAC+GGG 0.361102 2.4:-63417585 None:intergenic
TGCATGGCCACCACCAATAA+TGG 0.361861 2.4:-63419987 None:intergenic
CTTGAGATAGGTACTACTAA+TGG 0.365396 2.4:+63418709 MS.gene02354:CDS
CGTCTTCGCCGTTGGTGTTA+CGG 0.365794 2.4:-63417586 None:intergenic
CAAGTACCTAGTTTCTTTCA+AGG 0.368680 2.4:+63419731 MS.gene02354:CDS
AGGAATAGCAATGGTAAAAC+TGG 0.382516 2.4:+63418805 MS.gene02354:CDS
TTGCTGCTGCTGTTGTTGTT+GGG 0.383016 2.4:-63419867 None:intergenic
CTGCAAAGCCGTGTAATTAC+CGG 0.385725 2.4:-63418215 None:intergenic
AAACTCACTTGTTTGCGAAC+TGG 0.388176 2.4:-63419185 None:intergenic
TTTGTCCATATTTCCTCCAT+TGG 0.390389 2.4:-63419100 None:intergenic
TACTACAGATTGATCACTTC+CGG 0.396054 2.4:-63417918 None:intergenic
AAACTAGGTACTTGATGAAA+TGG 0.398773 2.4:-63419722 None:intergenic
CCAAGACAATTTCTTGAGAT+AGG 0.405230 2.4:+63418697 MS.gene02354:CDS
TGCTGCTGTTGTTGTTGGGT+TGG 0.425340 2.4:-63419863 None:intergenic
GCAGCAAGCATGTTACTATC+AGG 0.425873 2.4:+63419524 MS.gene02354:CDS
GGCGGTGATAGCAGCGGTGG+CGG 0.446253 2.4:-63419924 None:intergenic
GCCATAGCTGCTGGTGGTAA+TGG 0.452891 2.4:-63419479 None:intergenic
CTATAGTATGCTCGAGGACA+TGG 0.465899 2.4:-63419140 None:intergenic
GGCGGTGACCGGAAAATAAC+CGG 0.466327 2.4:+63417608 MS.gene02354:CDS
GAGATGCTAAGTCATGTTAC+CGG 0.472299 2.4:+63418196 MS.gene02354:CDS
TGAGGTCTTTGAAATTGTAA+TGG 0.474559 2.4:-63419692 None:intergenic
TTGTGTTCATTTGAAGGTGA+TGG 0.474609 2.4:-63417662 None:intergenic
AGCATACTATAGATGCACTA+TGG 0.487105 2.4:+63419151 MS.gene02354:CDS
ATCTCCTCCATTATTGGTGG+TGG 0.487542 2.4:+63419980 MS.gene02354:CDS
ACGGCGAAGACGGCGGTGAC+CGG 0.490027 2.4:+63417597 MS.gene02354:CDS
TATATTATATGGACAAAGCA+TGG 0.490606 2.4:+63417426 None:intergenic
GTGTTACGGGTAAGGTTGAC+AGG 0.491562 2.4:-63417572 None:intergenic
ATTTGCTTGATCTGCAACAT+TGG 0.493278 2.4:-63418899 None:intergenic
TGTTGTTGCTATTGTTTGCA+TGG 0.494244 2.4:-63420003 None:intergenic
TGCTAGATCAGAAGCTTCAA+TGG 0.495447 2.4:+63418960 MS.gene02354:CDS
TGCCGAGGACAAAACAATCT+TGG 0.496599 2.4:+63419427 MS.gene02354:CDS
TGTTGGTTGTGTTCATTTGA+AGG 0.504024 2.4:-63417668 None:intergenic
CAGAATCAGAAACACAAGGC+TGG 0.504762 2.4:+63418842 MS.gene02354:CDS
AATAGGAAACATTCTATCGT+TGG 0.514918 2.4:-63417540 None:intergenic
AGAATCAGAAACACAAGGCT+GGG 0.517077 2.4:+63418843 MS.gene02354:CDS
CCATTGCTATTCCTCATCTG+AGG 0.520104 2.4:-63418796 None:intergenic
GTGAGATCTAATGTAACAGT+AGG 0.521520 2.4:-63419650 None:intergenic
AGAAAAGAAATCGACTTCAC+CGG 0.522609 2.4:-63417627 None:intergenic
ATATTATATGGACAAAGCAT+GGG 0.526634 2.4:+63417427 None:intergenic
GATCAATCTGTAGTAGATGA+TGG 0.527093 2.4:+63417926 MS.gene02354:CDS
AATTGCAAGTGGAGCTTCAA+CGG 0.528483 2.4:+63418146 MS.gene02354:CDS
TCTTCCTTGTTCAACAAGCA+TGG 0.531673 2.4:+63419601 MS.gene02354:CDS
GTCACCGCCGTCTTCGCCGT+TGG 0.533790 2.4:-63417594 None:intergenic
GGATCAATGTCAAGTGCAGA+TGG 0.534800 2.4:+63419545 MS.gene02354:CDS
GGTCTTCAATTGTCTCAAGA+AGG 0.538344 2.4:+63419812 MS.gene02354:CDS
ATAGCAATGGTAAAACTGGT+AGG 0.540414 2.4:+63418809 MS.gene02354:CDS
ATCTTGGTAACAACATATGA+AGG 0.541003 2.4:+63419443 MS.gene02354:CDS
TCCATTACCACCAGCAGCTA+TGG 0.541740 2.4:+63419478 MS.gene02354:CDS
CGTAACACCAACGGCGAAGA+CGG 0.544973 2.4:+63417587 MS.gene02354:CDS
GATGCCATTGCCATAGCTGC+TGG 0.545474 2.4:-63419488 None:intergenic
CCAAGGTGTTGGTGGAGCAA+TGG 0.549924 2.4:+63418672 MS.gene02354:CDS
GAATCACCACACTGAAAATG+AGG 0.553361 2.4:+63418264 MS.gene02354:CDS
TGATATTGGATTTAACATGT+TGG 0.558451 2.4:-63417685 None:intergenic
CCATTGCTCCACCAACACCT+TGG 0.560146 2.4:-63418672 None:intergenic
ATTAACATGGATATTAGAAG+TGG 0.561723 2.4:-63417744 None:intergenic
CCTATCTCAAGAAATTGTCT+TGG 0.566117 2.4:-63418697 None:intergenic
TCAGCTTGCACAATTGCAAG+TGG 0.569056 2.4:+63418135 MS.gene02354:intron
TTGTTGGGTTGGAGCTTGTG+TGG 0.572140 2.4:-63419852 None:intergenic
ATATAATTGCAGATAAGTGA+TGG 0.573518 2.4:+63419074 MS.gene02354:intron
TCATGTTACCGGTAATTACA+CGG 0.577854 2.4:+63418207 MS.gene02354:CDS
ACAACCTTCTTTAGCTGACT+CGG 0.578182 2.4:+63419895 MS.gene02354:CDS
GCTATCTCCTCCATTATTGG+TGG 0.580667 2.4:+63419977 MS.gene02354:CDS
ACCAATAATGGAGGAGATAG+CGG 0.580718 2.4:-63419975 None:intergenic
TTCTGTCCTTGAAAGAAACT+AGG 0.586929 2.4:-63419737 None:intergenic
ACATGGATATTAGAAGTGGA+AGG 0.594815 2.4:-63417740 None:intergenic
TAACATGCTTGCTGCTGCTG+AGG 0.595156 2.4:-63419516 None:intergenic
TAGCAATGGTAAAACTGGTA+GGG 0.595770 2.4:+63418810 MS.gene02354:CDS
TAAGGAAGCTTACATTAACA+TGG 0.598862 2.4:-63417757 None:intergenic
TCGTTGGTATAAGTAGATGA+TGG 0.603216 2.4:-63417524 None:intergenic
AACCTTACCCGTAACACCAA+CGG 0.603945 2.4:+63417578 MS.gene02354:CDS
AATGAGAAAAGCTCGTGTCT+CGG 0.604308 2.4:+63418933 MS.gene02354:CDS
TCTAATGTAACAGTAGGGAA+TGG 0.608110 2.4:-63419644 None:intergenic
GGCTTTGCAGATGCAACTTG+TGG 0.608912 2.4:+63418228 MS.gene02354:CDS
CTTCAATTGTCTCAAGAAGG+TGG 0.609272 2.4:+63419815 MS.gene02354:CDS
CTGACCGAGTCAGCTAAAGA+AGG 0.612594 2.4:-63419899 None:intergenic
GGTTTACAACTTGCAAACAC+CGG 0.613072 2.4:+63417899 MS.gene02354:CDS
ATCGGCGGTGATAGCAGCGG+TGG 0.617279 2.4:-63419927 None:intergenic
TGAGATCTAATGTAACAGTA+GGG 0.618128 2.4:-63419649 None:intergenic
GTTGCCATGCTTGTTGAACA+AGG 0.625899 2.4:-63419605 None:intergenic
GATCAAACACACCTCAGATG+AGG 0.626860 2.4:+63418785 MS.gene02354:CDS
ACCACCAGCAGCTATGGCAA+TGG 0.626876 2.4:+63419484 MS.gene02354:CDS
ATAGGTTCAACGTTGTGCCG+AGG 0.627663 2.4:+63419412 MS.gene02354:intron
TATAGATGCACTATGGCAGT+CGG 0.632166 2.4:+63419158 MS.gene02354:CDS
TGATGAAATGGTGCATGTTG+AGG 0.633017 2.4:-63419710 None:intergenic
TAGCTGCTGGTGGTAATGGA+TGG 0.633923 2.4:-63419475 None:intergenic
GAATCAGAAACACAAGGCTG+GGG 0.640268 2.4:+63418844 MS.gene02354:CDS
AGCGGTGAAATTAGGATCGG+CGG 0.644865 2.4:-63419942 None:intergenic
AACAGCGGTGAAATTAGGAT+CGG 0.645945 2.4:-63419945 None:intergenic
TAAGTGATGGATGCCAATGG+AGG 0.670782 2.4:+63419087 MS.gene02354:CDS
AACACCAACGGCGAAGACGG+CGG 0.671264 2.4:+63417590 MS.gene02354:CDS
GTGCATCTATAGTATGCTCG+AGG 0.675667 2.4:-63419146 None:intergenic
CCTCAGATGAGGAATAGCAA+TGG 0.676716 2.4:+63418796 MS.gene02354:CDS
TATTATATGGACAAAGCATG+GGG 0.678619 2.4:+63417428 None:intergenic
AGGATCGGCGGTGATAGCAG+CGG 0.681008 2.4:-63419930 None:intergenic
GCCATTGCCATAGCTGCTGG+TGG 0.689582 2.4:-63419485 None:intergenic
ATGGCCACCACCAATAATGG+AGG 0.694001 2.4:-63419984 None:intergenic
TAAACGCGCTAAGACTACTG+AGG 0.707106 2.4:+63417970 MS.gene02354:CDS
AGATAAGTGATGGATGCCAA+TGG 0.716557 2.4:+63419084 MS.gene02354:intron
GATAGCGGCTGCGAGAACAG+CGG 0.719593 2.4:-63419960 None:intergenic
AGTCCAGAATCAGAAACACA+AGG 0.719780 2.4:+63418838 MS.gene02354:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAATATTGTTAAAATTC+AGG + chr2.4:63418621-63418640 MS.gene02354:intron 10.0%
!! TTAAATATGAGAAATTAATA+AGG - chr2.4:63417778-63417797 None:intergenic 10.0%
!! AATTAAATCACAATTGATTA+AGG + chr2.4:63419002-63419021 MS.gene02354:intron 15.0%
!! GATAGAAAGAAATTAAAAAA+AGG - chr2.4:63417805-63417824 None:intergenic 15.0%
!!! ATTGATGTTTTTTTGTTAAT+AGG + chr2.4:63419394-63419413 MS.gene02354:intron 15.0%
!!! TTTTTTCAAATATTATAGAC+TGG + chr2.4:63417878-63417897 MS.gene02354:intron 15.0%
!! GTTTATATATCAATTTCATC+CGG - chr2.4:63418101-63418120 None:intergenic 20.0%
!! TAAATCCAATATCATCAAAA+AGG + chr2.4:63417694-63417713 MS.gene02354:CDS 20.0%
!! TATGGAATTCAAATCTTAAA+TGG + chr2.4:63418385-63418404 MS.gene02354:intron 20.0%
!!! TATAATCAGTCAAAATTTTC+TGG + chr2.4:63419791-63419810 MS.gene02354:CDS 20.0%
!!! TTTGAAATTGTAATGGATTT+GGG - chr2.4:63419688-63419707 None:intergenic 20.0%
! ATAGCTCTTGCTAATAAATT+TGG - chr2.4:63419581-63419600 None:intergenic 25.0%
! ATATAATTGCAGATAAGTGA+TGG + chr2.4:63419074-63419093 MS.gene02354:intron 25.0%
! ATTAACATGGATATTAGAAG+TGG - chr2.4:63417747-63417766 None:intergenic 25.0%
! CAATCTGGCATATAATATAA+GGG - chr2.4:63418587-63418606 None:intergenic 25.0%
! GACTTTGTAAACTCAAAATA+TGG + chr2.4:63418367-63418386 MS.gene02354:intron 25.0%
! TGATATTGGATTTAACATGT+TGG - chr2.4:63417688-63417707 None:intergenic 25.0%
! TTATTAACATGTTACCAATC+TGG - chr2.4:63418602-63418621 None:intergenic 25.0%
!! AATACAATTAGCAACTTTTC+AGG + chr2.4:63420049-63420068 MS.gene02354:CDS 25.0%
!! ATGCAACTAGTAATTTTATG+TGG + chr2.4:63418069-63418088 MS.gene02354:intron 25.0%
!! GATAGAATGTTTCCTATTTT+AGG + chr2.4:63417545-63417564 MS.gene02354:CDS 25.0%
!! TAATTTTATGTGGTCTTTAC+CGG + chr2.4:63418079-63418098 MS.gene02354:intron 25.0%
!! TTTCTAACTGAATTTTGTGA+TGG + chr2.4:63419049-63419068 MS.gene02354:intron 25.0%
!!! AATATTTTCTGAGACTTGTT+TGG - chr2.4:63418871-63418890 None:intergenic 25.0%
!!! AATCTCCTTTTTGATGATAT+TGG - chr2.4:63417702-63417721 None:intergenic 25.0%
!!! CTTTGAAATTGTAATGGATT+TGG - chr2.4:63419689-63419708 None:intergenic 25.0%
AAACTAGGTACTTGATGAAA+TGG - chr2.4:63419725-63419744 None:intergenic 30.0%
AATAGGAAACATTCTATCGT+TGG - chr2.4:63417543-63417562 None:intergenic 30.0%
AATTTAGAAAAAGCGACATG+TGG - chr2.4:63419262-63419281 None:intergenic 30.0%
CCAATCTGGCATATAATATA+AGG - chr2.4:63418588-63418607 None:intergenic 30.0%
CCTTATATTATATGCCAGAT+TGG + chr2.4:63418585-63418604 MS.gene02354:intron 30.0%
GAGGAAATATGGACAAAAAA+TGG + chr2.4:63419106-63419125 MS.gene02354:CDS 30.0%
TAAGGAAGCTTACATTAACA+TGG - chr2.4:63417760-63417779 None:intergenic 30.0%
TATGGACAAAAAATGGCTAA+AGG + chr2.4:63419113-63419132 MS.gene02354:CDS 30.0%
TGAGATCTAATGTAACAGTA+GGG - chr2.4:63419652-63419671 None:intergenic 30.0%
TTAGAGACGAAATTAGAGAT+AGG + chr2.4:63419281-63419300 MS.gene02354:intron 30.0%
TTAGTATACTAACATCATGC+AGG - chr2.4:63418463-63418482 None:intergenic 30.0%
TTCATGACATGTCAATTTAG+TGG + chr2.4:63418335-63418354 MS.gene02354:intron 30.0%
TTGACAGGAAATCCTAAAAT+AGG - chr2.4:63417560-63417579 None:intergenic 30.0%
! ATCTTGGTAACAACATATGA+AGG + chr2.4:63419443-63419462 MS.gene02354:CDS 30.0%
! TAATTACCTCATTTTCAGTG+TGG - chr2.4:63418273-63418292 None:intergenic 30.0%
!! TGAGGTCTTTGAAATTGTAA+TGG - chr2.4:63419695-63419714 None:intergenic 30.0%
!!! CATGTGGACTATTTTTTTAG+TGG - chr2.4:63419246-63419265 None:intergenic 30.0%
!!! GCTGTTTTGAAGGTAAAAAA+GGG - chr2.4:63417505-63417524 None:intergenic 30.0%
AAAACTGAGGAGAAAAACCA+AGG + chr2.4:63418655-63418674 MS.gene02354:CDS 35.0%
ACATGGATATTAGAAGTGGA+AGG - chr2.4:63417743-63417762 None:intergenic 35.0%
AGCATACTATAGATGCACTA+TGG + chr2.4:63419151-63419170 MS.gene02354:CDS 35.0%
AGGAATAGCAATGGTAAAAC+TGG + chr2.4:63418805-63418824 MS.gene02354:CDS 35.0%
ATAGCAATGGTAAAACTGGT+AGG + chr2.4:63418809-63418828 MS.gene02354:CDS 35.0%
ATTTGCTTGATCTGCAACAT+TGG - chr2.4:63418902-63418921 None:intergenic 35.0%
CAAGTACCTAGTTTCTTTCA+AGG + chr2.4:63419731-63419750 MS.gene02354:CDS 35.0%
CCAAGACAATTTCTTGAGAT+AGG + chr2.4:63418697-63418716 MS.gene02354:CDS 35.0%
CCTATCTCAAGAAATTGTCT+TGG - chr2.4:63418700-63418719 None:intergenic 35.0%
CTTGAGATAGGTACTACTAA+TGG + chr2.4:63418709-63418728 MS.gene02354:CDS 35.0%
GATCAATCTGTAGTAGATGA+TGG + chr2.4:63417926-63417945 MS.gene02354:CDS 35.0%
GGTTGTTAATGCAAAAACTG+AGG + chr2.4:63418642-63418661 MS.gene02354:intron 35.0%
GTGAGATCTAATGTAACAGT+AGG - chr2.4:63419653-63419672 None:intergenic 35.0%
TACTACAGATTGATCACTTC+CGG - chr2.4:63417921-63417940 None:intergenic 35.0%
TAGCAATGGTAAAACTGGTA+GGG + chr2.4:63418810-63418829 MS.gene02354:CDS 35.0%
TCATGTTACCGGTAATTACA+CGG + chr2.4:63418207-63418226 MS.gene02354:CDS 35.0%
TCGTTGGTATAAGTAGATGA+TGG - chr2.4:63417527-63417546 None:intergenic 35.0%
TCTAATGTAACAGTAGGGAA+TGG - chr2.4:63419647-63419666 None:intergenic 35.0%
TGAGAGTGAGATATTGGAAT+TGG - chr2.4:63417482-63417501 None:intergenic 35.0%
TTCTGTCCTTGAAAGAAACT+AGG - chr2.4:63419740-63419759 None:intergenic 35.0%
TTGTGTTCATTTGAAGGTGA+TGG - chr2.4:63417665-63417684 None:intergenic 35.0%
TTTGTCCATATTTCCTCCAT+TGG - chr2.4:63419103-63419122 None:intergenic 35.0%
! AGAAAAGAAATCGACTTCAC+CGG - chr2.4:63417630-63417649 None:intergenic 35.0%
! TGTTGGTTGTGTTCATTTGA+AGG - chr2.4:63417671-63417690 None:intergenic 35.0%
! TGTTGTTGCTATTGTTTGCA+TGG - chr2.4:63420006-63420025 None:intergenic 35.0%
!! TACCAAGATTGTTTTGTCCT+CGG - chr2.4:63419432-63419451 None:intergenic 35.0%
!!! GGCTGTTTTGAAGGTAAAAA+AGG - chr2.4:63417506-63417525 None:intergenic 35.0%
AAACTCACTTGTTTGCGAAC+TGG - chr2.4:63419188-63419207 None:intergenic 40.0%
AAAGGGTGAGAGTGAGATAT+TGG - chr2.4:63417488-63417507 None:intergenic 40.0%
AACAGCGGTGAAATTAGGAT+CGG - chr2.4:63419948-63419967 None:intergenic 40.0%
AATGAGAAAAGCTCGTGTCT+CGG + chr2.4:63418933-63418952 MS.gene02354:CDS 40.0%
AATTGCAAGTGGAGCTTCAA+CGG + chr2.4:63418146-63418165 MS.gene02354:CDS 40.0%
ACAACCTTCTTTAGCTGACT+CGG + chr2.4:63419895-63419914 MS.gene02354:CDS 40.0%
AGAATCAGAAACACAAGGCT+GGG + chr2.4:63418843-63418862 MS.gene02354:CDS 40.0%
AGTCCAGAATCAGAAACACA+AGG + chr2.4:63418838-63418857 MS.gene02354:CDS 40.0%
CTTCAATTGTCTCAAGAAGG+TGG + chr2.4:63419815-63419834 MS.gene02354:CDS 40.0%
GAATCACCACACTGAAAATG+AGG + chr2.4:63418264-63418283 MS.gene02354:CDS 40.0%
GAGATGCTAAGTCATGTTAC+CGG + chr2.4:63418196-63418215 MS.gene02354:CDS 40.0%
GGTCTTCAATTGTCTCAAGA+AGG + chr2.4:63419812-63419831 MS.gene02354:CDS 40.0%
GGTTTACAACTTGCAAACAC+CGG + chr2.4:63417899-63417918 MS.gene02354:CDS 40.0%
TATAGATGCACTATGGCAGT+CGG + chr2.4:63419158-63419177 MS.gene02354:CDS 40.0%
TCTTCCTTGTTCAACAAGCA+TGG + chr2.4:63419601-63419620 MS.gene02354:CDS 40.0%
TGATGAAATGGTGCATGTTG+AGG - chr2.4:63419713-63419732 None:intergenic 40.0%
TGCTAGATCAGAAGCTTCAA+TGG + chr2.4:63418960-63418979 MS.gene02354:CDS 40.0%
! ACCAATAATGGAGGAGATAG+CGG - chr2.4:63419978-63419997 None:intergenic 40.0%
! AGAAGTGGAAGGCTTTTCAT+CGG - chr2.4:63417732-63417751 None:intergenic 40.0%
!! AGATAAGTGATGGATGCCAA+TGG + chr2.4:63419084-63419103 MS.gene02354:intron 40.0%
!! GTAGATGATGGCTGTTTTGA+AGG - chr2.4:63417515-63417534 None:intergenic 40.0%
AACCTTACCCGTAACACCAA+CGG + chr2.4:63417578-63417597 MS.gene02354:CDS 45.0%
ATCTCCTCCATTATTGGTGG+TGG + chr2.4:63419980-63419999 MS.gene02354:CDS 45.0%
CAGAATCAGAAACACAAGGC+TGG + chr2.4:63418842-63418861 MS.gene02354:CDS 45.0%
CCTCAGATGAGGAATAGCAA+TGG + chr2.4:63418796-63418815 MS.gene02354:CDS 45.0%
CTATAGTATGCTCGAGGACA+TGG - chr2.4:63419143-63419162 None:intergenic 45.0%
CTGCAAAGCCGTGTAATTAC+CGG - chr2.4:63418218-63418237 None:intergenic 45.0%
GAATCAGAAACACAAGGCTG+GGG + chr2.4:63418844-63418863 MS.gene02354:CDS 45.0%
GAGGAGAAAAACCAAGGTGT+TGG + chr2.4:63418661-63418680 MS.gene02354:CDS 45.0%
GATCAAACACACCTCAGATG+AGG + chr2.4:63418785-63418804 MS.gene02354:CDS 45.0%
GCAGCAAGCATGTTACTATC+AGG + chr2.4:63419524-63419543 MS.gene02354:CDS 45.0%
GCTATCTCCTCCATTATTGG+TGG + chr2.4:63419977-63419996 MS.gene02354:CDS 45.0%
GGATCAATGTCAAGTGCAGA+TGG + chr2.4:63419545-63419564 MS.gene02354:CDS 45.0%
GGATGCCAATGGAGGAAATA+TGG + chr2.4:63419095-63419114 MS.gene02354:CDS 45.0%
GTGCATCTATAGTATGCTCG+AGG - chr2.4:63419149-63419168 None:intergenic 45.0%
TAAACGCGCTAAGACTACTG+AGG + chr2.4:63417970-63417989 MS.gene02354:CDS 45.0%
TCAGCTTGCACAATTGCAAG+TGG + chr2.4:63418135-63418154 MS.gene02354:intron 45.0%
TGCCGAGGACAAAACAATCT+TGG + chr2.4:63419427-63419446 MS.gene02354:CDS 45.0%
! CAGCCTTGTGTTTCTGATTC+TGG - chr2.4:63418844-63418863 None:intergenic 45.0%
! CCATTGCTATTCCTCATCTG+AGG - chr2.4:63418799-63418818 None:intergenic 45.0%
! GTTGCCATGCTTGTTGAACA+AGG - chr2.4:63419608-63419627 None:intergenic 45.0%
! TTGCTGCTGCTGTTGTTGTT+GGG - chr2.4:63419870-63419889 None:intergenic 45.0%
!! CGACTTCACCGGTTATTTTC+CGG - chr2.4:63417619-63417638 None:intergenic 45.0%
!! GAGAAAAACCAAGGTGTTGG+TGG + chr2.4:63418664-63418683 MS.gene02354:CDS 45.0%
!! TAAGTGATGGATGCCAATGG+AGG + chr2.4:63419087-63419106 MS.gene02354:CDS 45.0%
AGCGGTGAAATTAGGATCGG+CGG - chr2.4:63419945-63419964 None:intergenic 50.0%
ATAGGTTCAACGTTGTGCCG+AGG + chr2.4:63419412-63419431 MS.gene02354:intron 50.0%
ATGGCCACCACCAATAATGG+AGG - chr2.4:63419987-63420006 None:intergenic 50.0%
CTGACCGAGTCAGCTAAAGA+AGG - chr2.4:63419902-63419921 None:intergenic 50.0%
GCCGCTATCTCCTCCATTAT+TGG + chr2.4:63419974-63419993 MS.gene02354:CDS 50.0%
GCGAGAACAGCGGTGAAATT+AGG - chr2.4:63419953-63419972 None:intergenic 50.0%
GGCTTTGCAGATGCAACTTG+TGG + chr2.4:63418228-63418247 MS.gene02354:CDS 50.0%
GTGTTACGGGTAAGGTTGAC+AGG - chr2.4:63417575-63417594 None:intergenic 50.0%
GTTGCTGCTGCTGTTGTTGT+TGG - chr2.4:63419871-63419890 None:intergenic 50.0%
TCCATTACCACCAGCAGCTA+TGG + chr2.4:63419478-63419497 MS.gene02354:CDS 50.0%
TGCATGGCCACCACCAATAA+TGG - chr2.4:63419990-63420009 None:intergenic 50.0%
! TAACATGCTTGCTGCTGCTG+AGG - chr2.4:63419519-63419538 None:intergenic 50.0%
! TGCTGCTGTTGTTGTTGGGT+TGG - chr2.4:63419866-63419885 None:intergenic 50.0%
!! TAGCTGCTGGTGGTAATGGA+TGG - chr2.4:63419478-63419497 None:intergenic 50.0%
!! TTGTTGGGTTGGAGCTTGTG+TGG - chr2.4:63419855-63419874 None:intergenic 50.0%
ACCACCAGCAGCTATGGCAA+TGG + chr2.4:63419484-63419503 MS.gene02354:CDS 55.0%
CCATTGCTCCACCAACACCT+TGG - chr2.4:63418675-63418694 None:intergenic 55.0%
CGTAACACCAACGGCGAAGA+CGG + chr2.4:63417587-63417606 MS.gene02354:CDS 55.0%
GATGCCATTGCCATAGCTGC+TGG - chr2.4:63419491-63419510 None:intergenic 55.0%
GCCATAGCTGCTGGTGGTAA+TGG - chr2.4:63419482-63419501 None:intergenic 55.0%
GGCGGTGACCGGAAAATAAC+CGG + chr2.4:63417608-63417627 MS.gene02354:CDS 55.0%
!! CCAAGGTGTTGGTGGAGCAA+TGG + chr2.4:63418672-63418691 MS.gene02354:CDS 55.0%
!! CGTCTTCGCCGTTGGTGTTA+CGG - chr2.4:63417589-63417608 None:intergenic 55.0%
!! GTCTTCGCCGTTGGTGTTAC+GGG - chr2.4:63417588-63417607 None:intergenic 55.0%
AACACCAACGGCGAAGACGG+CGG + chr2.4:63417590-63417609 MS.gene02354:CDS 60.0%
AGGATCGGCGGTGATAGCAG+CGG - chr2.4:63419933-63419952 None:intergenic 60.0%
GCCATTGCCATAGCTGCTGG+TGG - chr2.4:63419488-63419507 None:intergenic 60.0%
! GATAGCGGCTGCGAGAACAG+CGG - chr2.4:63419963-63419982 None:intergenic 60.0%
!! CGCCGTTGGTGTTACGGGTA+AGG - chr2.4:63417583-63417602 None:intergenic 60.0%
ATCGGCGGTGATAGCAGCGG+TGG - chr2.4:63419930-63419949 None:intergenic 65.0%
ACGGCGAAGACGGCGGTGAC+CGG + chr2.4:63417597-63417616 MS.gene02354:CDS 70.0%
GGCGGTGATAGCAGCGGTGG+CGG - chr2.4:63419927-63419946 None:intergenic 70.0%
GTCACCGCCGTCTTCGCCGT+TGG - chr2.4:63417597-63417616 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 63417434 63420078 63417434 ID=MS.gene02354
chr2.4 mRNA 63417434 63420078 63417434 ID=MS.gene02354.t1;Parent=MS.gene02354
chr2.4 exon 63417434 63417766 63417434 ID=MS.gene02354.t1.exon1;Parent=MS.gene02354.t1
chr2.4 CDS 63417434 63417766 63417434 ID=cds.MS.gene02354.t1;Parent=MS.gene02354.t1
chr2.4 exon 63417896 63417991 63417896 ID=MS.gene02354.t1.exon2;Parent=MS.gene02354.t1
chr2.4 CDS 63417896 63417991 63417896 ID=cds.MS.gene02354.t1;Parent=MS.gene02354.t1
chr2.4 exon 63418139 63418285 63418139 ID=MS.gene02354.t1.exon3;Parent=MS.gene02354.t1
chr2.4 CDS 63418139 63418285 63418139 ID=cds.MS.gene02354.t1;Parent=MS.gene02354.t1
chr2.4 exon 63418643 63418981 63418643 ID=MS.gene02354.t1.exon4;Parent=MS.gene02354.t1
chr2.4 CDS 63418643 63418981 63418643 ID=cds.MS.gene02354.t1;Parent=MS.gene02354.t1
chr2.4 exon 63419086 63419199 63419086 ID=MS.gene02354.t1.exon5;Parent=MS.gene02354.t1
chr2.4 CDS 63419086 63419199 63419086 ID=cds.MS.gene02354.t1;Parent=MS.gene02354.t1
chr2.4 exon 63419416 63420078 63419416 ID=MS.gene02354.t1.exon6;Parent=MS.gene02354.t1
chr2.4 CDS 63419416 63420078 63419416 ID=cds.MS.gene02354.t1;Parent=MS.gene02354.t1
Gene Sequence

>MS.gene02354

ATGGACAAAGCATGGGGTCTAGCTCTTGATACTTCTTCATCTTCTCCAATTCCAATATCTCACTCTCACCCTTTTTTACCTTCAAAACAGCCATCATCTACTTATACCAACGATAGAATGTTTCCTATTTTAGGATTTCCTGTCAACCTTACCCGTAACACCAACGGCGAAGACGGCGGTGACCGGAAAATAACCGGTGAAGTCGATTTCTTTTCTGAAAGAAACAAACCATCACCTTCAAATGAACACAACCAACATGTTAAATCCAATATCATCAAAAAGGAGATTGTTTCAACCGATGAAAAGCCTTCCACTTCTAATATCCATGTTAATGTAAGCTTCCTTATTAATTTCTCATATTTAATTTTCCTTTTTTTAATTTCTTTCTATCAATAATAAAATATTTCTTATAAATAATAACATATGTACTAATTAATTTTATTTTTTTTTCAAATATTATAGACTGGTTTACAACTTGCAAACACCGGAAGTGATCAATCTGTAGTAGATGATGGAGTTTCATCTGATGCTGAAAATAAACGCGCTAAGACTACTGAGGTACGTAATTCAATTTAGTGCATGTTTGATATCACGATTTGTATGTTAGATTTAGAAATAGAATTGTTGTGTTATATATGCAACTAGTAATTTTATGTGGTCTTTACCGGATGAAATTGATATATAAACTTGTTTAATTTGATTCAGCTTGCACAATTGCAAGTGGAGCTTCAACGGATGAATTCAGAGAACAAAAAGCTGAAAGAGATGCTAAGTCATGTTACCGGTAATTACACGGCTTTGCAGATGCAACTTGTGGCATTAATGCAAAAGAATCACCACACTGAAAATGAGGTAATTATCAATCGCTAGTTTCTTTCTATTTTCATTATTCTTATGTATGTTCATGACATGTCAATTTAGTGGTACAAGTTTGACTTTGTAAACTCAAAATATGGAATTCAAATCTTAAATGGAAAAATTGTACAATTGTCATAGTTGTTAATAATACTTCATTGACATAAATGACCTGCATGATGTTAGTATACTAAAAGTAGAAATTAAATATTGAAAATTATGTTAATTTATTTCTCAAAATTGTGAAAACTAATTTTTCTCAACATATACTTGCTATTTTTAGAATCTTAGTAAGCCCTTATATTATATGCCAGATTGGTAACATGTTAATAAATTAATATTGTTAAAATTCAGGTTGTTAATGCAAAAACTGAGGAGAAAAACCAAGGTGTTGGTGGAGCAATGGTACCAAGACAATTTCTTGAGATAGGTACTACTAATGGAACAGCAGAAGTTGAAGATCAAGTATCAAATTCATCATCTGATGAAAGAACAAGATCAAACACACCTCAGATGAGGAATAGCAATGGTAAAACTGGTAGGGAAGACAGTCCAGAATCAGAAACACAAGGCTGGGGACCAAACAAGTCTCAGAAAATATTGAACTCTTCCAATGTTGCAGATCAAGCAAATACAGAAGCTACAATGAGAAAAGCTCGTGTCTCGGTTCGTGCTAGATCAGAAGCTTCAATGGTATGCATTCATTAACTACTAATTAAATCACAATTGATTAAGGCACTTGAATAATTTCTTGATTAGTTTTCTAACTGAATTTTGTGATGGATATATAATTGCAGATAAGTGATGGATGCCAATGGAGGAAATATGGACAAAAAATGGCTAAAGGAAATCCATGTCCTCGAGCATACTATAGATGCACTATGGCAGTCGGTTGTCCAGTTCGCAAACAAGTGAGTTTTCTTTTTACTAAAGAAATATCGTGTCTAATATGAACCACTAAAAAAATAGTCCACATGTCGCTTTTTCTAAATTTAGAGACGAAATTAGAGATAGGTTGTTTTTTCTGTATAAATTTGTATAGATGATTTAACTTACTATATTAGAAGTAGTATTAGTATTTTTGTATTGTAATTTAGAGCTAATTATTGATGTTTTTTTGTTAATAGGTTCAACGTTGTGCCGAGGACAAAACAATCTTGGTAACAACATATGAAGGAACACATAACCATCCATTACCACCAGCAGCTATGGCAATGGCATCAACAACCTCAGCAGCAGCAAGCATGTTACTATCAGGATCAATGTCAAGTGCAGATGGAATAATGACACCAAATTTATTAGCAAGAGCTATTCTTCCTTGTTCAACAAGCATGGCAACACTTTCAGCTTCAGCACCATTCCCTACTGTTACATTAGATCTCACACAAAATTCAAACCCAAATCCATTACAATTTCAAAGACCTCAACATGCACCATTTCATCAAGTACCTAGTTTCTTTCAAGGACAGAATCAGAATTTTGCACAAGCAGCAGCATCACTTTATAATCAGTCAAAATTTTCTGGTCTTCAATTGTCTCAAGAAGGTGGTTCTTCTCATTTGACCACACAAGCTCCAACCCAACAACAACAGCAGCAGCAACAACAACAACCTTCTTTAGCTGACTCGGTCAGCGCCGCCACCGCTGCTATCACCGCCGATCCTAATTTCACCGCTGTTCTCGCAGCCGCTATCTCCTCCATTATTGGTGGTGGCCATGCAAACAATAGCAACAACAACAACAACAACAGCAATAGCAGAAATACAATTAGCAACTTTTCAGGAAACTAA
Protein sequence

>MS.gene02354.t1

MDKAWGLALDTSSSSPIPISHSHPFLPSKQPSSTYTNDRMFPILGFPVNLTRNTNGEDGGDRKITGEVDFFSERNKPSPSNEHNQHVKSNIIKKEIVSTDEKPSTSNIHVNTGLQLANTGSDQSVVDDGVSSDAENKRAKTTELAQLQVELQRMNSENKKLKEMLSHVTGNYTALQMQLVALMQKNHHTENEVVNAKTEEKNQGVGGAMVPRQFLEIGTTNGTAEVEDQVSNSSSDERTRSNTPQMRNSNGKTGREDSPESETQGWGPNKSQKILNSSNVADQANTEATMRKARVSVRARSEASMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKTILVTTYEGTHNHPLPPAAMAMASTTSAAASMLLSGSMSSADGIMTPNLLARAILPCSTSMATLSASAPFPTVTLDLTQNSNPNPLQFQRPQHAPFHQVPSFFQGQNQNFAQAAASLYNQSKFSGLQLSQEGGSSHLTTQAPTQQQQQQQQQQPSLADSVSAATAAITADPNFTAVLAAAISSIIGGGHANNSNNNNNNSNSRNTISNFSGN