Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene023558.t1 | XP_024637337.1 | 89.8 | 127 | 11 | 1 | 1 | 127 | 484 | 608 | 1.50E-59 | 240.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene023558.t1 | Q9FF29 | 43.6 | 140 | 67 | 5 | 1 | 132 | 499 | 634 | 1.2e-20 | 102.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene023558.t1 | G7JMD6 | 89.8 | 127 | 11 | 1 | 1 | 127 | 484 | 608 | 1.1e-59 | 240.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene023558.t1 | MTR_4g073220 | 89.764 | 127 | 11 | 1 | 1 | 127 | 484 | 608 | 1.77e-76 | 251 |
MS.gene023558.t1 | MTR_7g075000 | 51.724 | 232 | 103 | 4 | 142 | 373 | 43 | 265 | 3.76e-57 | 195 |
MS.gene023558.t1 | MTR_1g026990 | 53.571 | 140 | 55 | 4 | 1 | 132 | 171 | 308 | 8.27e-39 | 142 |
MS.gene023558.t1 | MTR_1g027160 | 50.968 | 155 | 66 | 4 | 1 | 147 | 171 | 323 | 1.13e-38 | 142 |
MS.gene023558.t1 | MTR_1g028280 | 58.475 | 118 | 44 | 3 | 1 | 115 | 542 | 657 | 4.21e-37 | 143 |
MS.gene023558.t1 | MTR_1g028280 | 58.475 | 118 | 44 | 3 | 1 | 115 | 503 | 618 | 4.53e-37 | 142 |
MS.gene023558.t1 | MTR_1g027250 | 52.593 | 135 | 58 | 3 | 1 | 129 | 171 | 305 | 7.98e-37 | 137 |
MS.gene023558.t1 | MTR_1g027460 | 56.780 | 118 | 46 | 3 | 1 | 115 | 198 | 313 | 5.16e-36 | 135 |
MS.gene023558.t1 | MTR_1g027540 | 52.174 | 138 | 56 | 4 | 1 | 130 | 273 | 408 | 3.17e-35 | 134 |
MS.gene023558.t1 | MTR_1g027680 | 54.622 | 119 | 48 | 3 | 1 | 115 | 561 | 677 | 8.19e-33 | 130 |
MS.gene023558.t1 | MTR_1g027990 | 53.782 | 119 | 49 | 3 | 1 | 115 | 564 | 680 | 1.10e-32 | 130 |
MS.gene023558.t1 | MTR_1g027320 | 52.893 | 121 | 50 | 3 | 1 | 114 | 171 | 291 | 2.01e-32 | 125 |
MS.gene023558.t1 | MTR_1g031530 | 51.724 | 116 | 53 | 2 | 1 | 113 | 199 | 314 | 6.68e-32 | 124 |
MS.gene023558.t1 | MTR_1g027730 | 53.390 | 118 | 50 | 3 | 1 | 115 | 197 | 312 | 9.04e-32 | 124 |
MS.gene023558.t1 | MTR_1g031430 | 50.000 | 116 | 55 | 2 | 1 | 113 | 51 | 166 | 2.87e-31 | 118 |
MS.gene023558.t1 | MTR_6g045030 | 44.371 | 151 | 73 | 5 | 1 | 148 | 277 | 419 | 4.44e-31 | 123 |
MS.gene023558.t1 | MTR_3g028630 | 50.847 | 118 | 53 | 3 | 1 | 115 | 268 | 383 | 1.24e-30 | 122 |
MS.gene023558.t1 | MTR_1g027840 | 44.231 | 156 | 81 | 4 | 1 | 153 | 197 | 349 | 1.63e-30 | 120 |
MS.gene023558.t1 | MTR_1g027830 | 52.542 | 118 | 51 | 3 | 1 | 115 | 524 | 639 | 3.30e-30 | 123 |
MS.gene023558.t1 | MTR_1g027930 | 51.695 | 118 | 52 | 3 | 1 | 115 | 141 | 256 | 4.34e-30 | 118 |
MS.gene023558.t1 | MTR_1g031510 | 52.586 | 116 | 52 | 2 | 1 | 113 | 486 | 601 | 5.31e-30 | 122 |
MS.gene023558.t1 | MTR_1g027410 | 55.085 | 118 | 48 | 3 | 1 | 115 | 270 | 385 | 7.96e-30 | 119 |
MS.gene023558.t1 | MTR_1g028100 | 50.420 | 119 | 53 | 4 | 1 | 115 | 258 | 374 | 2.10e-29 | 118 |
MS.gene023558.t1 | MTR_1g031280 | 47.200 | 125 | 58 | 3 | 1 | 117 | 515 | 639 | 6.03e-29 | 119 |
MS.gene023558.t1 | MTR_1g028020 | 43.949 | 157 | 64 | 6 | 1 | 148 | 316 | 457 | 1.28e-28 | 118 |
MS.gene023558.t1 | MTR_1g028170 | 42.767 | 159 | 77 | 5 | 1 | 155 | 285 | 433 | 1.64e-28 | 116 |
MS.gene023558.t1 | MTR_1g027440 | 51.304 | 115 | 44 | 3 | 1 | 115 | 449 | 551 | 3.26e-28 | 117 |
MS.gene023558.t1 | MTR_1g031200 | 47.581 | 124 | 57 | 3 | 2 | 117 | 370 | 493 | 3.49e-28 | 116 |
MS.gene023558.t1 | MTR_1g027140 | 50.000 | 124 | 56 | 4 | 1 | 120 | 601 | 722 | 9.34e-28 | 115 |
MS.gene023558.t1 | MTR_1g027050 | 50.000 | 124 | 56 | 4 | 1 | 120 | 604 | 725 | 1.48e-27 | 115 |
MS.gene023558.t1 | MTR_1g031520 | 50.427 | 117 | 55 | 2 | 1 | 114 | 483 | 599 | 5.18e-27 | 113 |
MS.gene023558.t1 | MTR_1g027070 | 48.800 | 125 | 56 | 4 | 1 | 120 | 567 | 688 | 1.14e-26 | 112 |
MS.gene023558.t1 | MTR_1g031560 | 48.718 | 117 | 57 | 2 | 1 | 114 | 504 | 620 | 8.10e-26 | 110 |
MS.gene023558.t1 | MTR_1g027030 | 48.387 | 124 | 58 | 3 | 1 | 120 | 603 | 724 | 3.09e-25 | 108 |
MS.gene023558.t1 | MTR_1g027030 | 48.387 | 124 | 58 | 3 | 1 | 120 | 553 | 674 | 3.34e-25 | 108 |
MS.gene023558.t1 | MTR_1g028290 | 44.915 | 118 | 60 | 3 | 1 | 115 | 458 | 573 | 7.90e-25 | 107 |
MS.gene023558.t1 | MTR_6g082830 | 43.220 | 118 | 62 | 2 | 1 | 115 | 173 | 288 | 1.08e-24 | 103 |
MS.gene023558.t1 | MTR_6g082860 | 43.220 | 118 | 62 | 2 | 1 | 115 | 229 | 344 | 3.93e-24 | 102 |
MS.gene023558.t1 | MTR_1g110220 | 43.802 | 121 | 58 | 4 | 1 | 115 | 423 | 539 | 2.68e-23 | 102 |
MS.gene023558.t1 | MTR_1g110140 | 40.288 | 139 | 72 | 5 | 1 | 133 | 225 | 358 | 3.99e-23 | 99.8 |
MS.gene023558.t1 | MTR_7g085860 | 40.678 | 118 | 65 | 3 | 1 | 115 | 334 | 449 | 8.33e-23 | 100 |
MS.gene023558.t1 | MTR_1g115485 | 40.336 | 119 | 65 | 3 | 1 | 115 | 530 | 646 | 3.63e-22 | 99.4 |
MS.gene023558.t1 | MTR_1g110260 | 40.496 | 121 | 62 | 4 | 1 | 115 | 403 | 519 | 7.13e-22 | 97.8 |
MS.gene023558.t1 | MTR_1g031580 | 45.000 | 120 | 57 | 4 | 1 | 115 | 470 | 585 | 8.03e-22 | 98.2 |
MS.gene023558.t1 | MTR_6g083210 | 41.322 | 121 | 61 | 5 | 1 | 115 | 173 | 289 | 1.69e-21 | 94.4 |
MS.gene023558.t1 | MTR_7g082400 | 38.333 | 120 | 67 | 3 | 1 | 115 | 253 | 370 | 2.46e-21 | 95.5 |
MS.gene023558.t1 | MTR_6g083290 | 41.322 | 121 | 61 | 5 | 1 | 115 | 185 | 301 | 4.04e-21 | 93.6 |
MS.gene023558.t1 | MTR_6g083780 | 40.678 | 118 | 65 | 3 | 1 | 115 | 522 | 637 | 4.06e-21 | 95.9 |
MS.gene023558.t1 | MTR_7g082280 | 38.333 | 120 | 67 | 3 | 1 | 115 | 596 | 713 | 4.23e-21 | 95.9 |
MS.gene023558.t1 | MTR_1g031460 | 42.500 | 120 | 60 | 4 | 1 | 115 | 461 | 576 | 5.10e-21 | 95.5 |
MS.gene023558.t1 | MTR_6g082950 | 38.710 | 124 | 60 | 4 | 1 | 115 | 293 | 409 | 6.25e-21 | 94.4 |
MS.gene023558.t1 | MTR_7g082300 | 34.899 | 149 | 84 | 5 | 1 | 141 | 719 | 862 | 7.26e-21 | 95.5 |
MS.gene023558.t1 | MTR_6g083270 | 41.322 | 121 | 61 | 5 | 1 | 115 | 328 | 444 | 8.73e-21 | 94.4 |
MS.gene023558.t1 | MTR_1g031320 | 43.333 | 120 | 59 | 4 | 1 | 115 | 474 | 589 | 8.77e-21 | 94.7 |
MS.gene023558.t1 | MTR_1g027970 | 38.889 | 126 | 73 | 3 | 1 | 124 | 459 | 582 | 9.17e-21 | 94.7 |
MS.gene023558.t1 | MTR_4g073230 | 40.678 | 118 | 65 | 3 | 1 | 115 | 468 | 583 | 9.29e-21 | 94.7 |
MS.gene023558.t1 | MTR_7g082510 | 37.815 | 119 | 68 | 3 | 1 | 115 | 515 | 631 | 1.62e-20 | 94.0 |
MS.gene023558.t1 | MTR_7g082490 | 37.815 | 119 | 68 | 3 | 1 | 115 | 280 | 396 | 2.68e-20 | 92.4 |
MS.gene023558.t1 | MTR_1g027420 | 40.517 | 116 | 67 | 2 | 1 | 115 | 416 | 530 | 2.82e-20 | 93.2 |
MS.gene023558.t1 | MTR_1g031540 | 44.167 | 120 | 58 | 4 | 1 | 115 | 165 | 280 | 2.84e-20 | 93.6 |
MS.gene023558.t1 | MTR_1g031540 | 40.000 | 120 | 40 | 2 | 1 | 115 | 518 | 610 | 3.41e-18 | 87.4 |
MS.gene023558.t1 | MTR_1g031540 | 44.167 | 120 | 58 | 4 | 1 | 115 | 457 | 572 | 3.03e-20 | 93.6 |
MS.gene023558.t1 | MTR_1g031540 | 40.000 | 120 | 40 | 2 | 1 | 115 | 810 | 902 | 2.91e-18 | 87.8 |
MS.gene023558.t1 | MTR_6g082870 | 39.496 | 119 | 66 | 4 | 1 | 115 | 530 | 646 | 3.07e-20 | 93.2 |
MS.gene023558.t1 | MTR_7g082110 | 38.333 | 120 | 66 | 4 | 1 | 115 | 705 | 821 | 3.13e-20 | 93.6 |
MS.gene023558.t1 | MTR_6g083300 | 38.710 | 124 | 60 | 4 | 1 | 115 | 173 | 289 | 3.17e-20 | 90.9 |
MS.gene023558.t1 | MTR_1g026940 | 38.793 | 116 | 68 | 2 | 1 | 115 | 472 | 585 | 3.38e-20 | 93.2 |
MS.gene023558.t1 | MTR_1g027500 | 39.316 | 117 | 67 | 3 | 1 | 115 | 473 | 587 | 3.48e-20 | 93.2 |
MS.gene023558.t1 | MTR_7g082380 | 37.984 | 129 | 72 | 4 | 1 | 124 | 230 | 355 | 4.80e-20 | 91.3 |
MS.gene023558.t1 | MTR_7g082470 | 40.000 | 120 | 65 | 4 | 1 | 115 | 503 | 620 | 5.68e-20 | 92.4 |
MS.gene023558.t1 | MTR_1g027690 | 38.095 | 126 | 74 | 3 | 1 | 124 | 457 | 580 | 7.42e-20 | 92.0 |
MS.gene023558.t1 | MTR_4g044393 | 39.167 | 120 | 65 | 4 | 1 | 115 | 703 | 819 | 7.90e-20 | 92.4 |
MS.gene023558.t1 | MTR_6g083760 | 41.667 | 120 | 62 | 5 | 1 | 115 | 493 | 609 | 1.08e-19 | 91.7 |
MS.gene023558.t1 | MTR_8g104520 | 40.164 | 122 | 64 | 4 | 1 | 115 | 513 | 632 | 1.49e-19 | 91.3 |
MS.gene023558.t1 | MTR_7g082430 | 38.655 | 119 | 67 | 3 | 1 | 115 | 484 | 600 | 2.12e-19 | 90.9 |
MS.gene023558.t1 | MTR_7g082360 | 38.655 | 119 | 65 | 4 | 1 | 115 | 207 | 321 | 5.09e-19 | 88.2 |
MS.gene023558.t1 | MTR_1g028080 | 39.316 | 117 | 68 | 3 | 1 | 115 | 459 | 574 | 6.14e-19 | 89.4 |
MS.gene023558.t1 | MTR_0394s0020 | 37.500 | 120 | 67 | 4 | 1 | 115 | 243 | 359 | 6.87e-19 | 87.8 |
MS.gene023558.t1 | MTR_1g108910 | 40.870 | 115 | 53 | 3 | 1 | 115 | 211 | 310 | 7.00e-19 | 87.4 |
MS.gene023558.t1 | MTR_1g110270 | 39.831 | 118 | 61 | 3 | 1 | 115 | 491 | 601 | 7.46e-19 | 89.0 |
MS.gene023558.t1 | MTR_1g110230 | 40.678 | 118 | 60 | 4 | 4 | 115 | 472 | 585 | 1.29e-18 | 88.2 |
MS.gene023558.t1 | MTR_1g028130 | 39.316 | 117 | 68 | 3 | 1 | 115 | 459 | 574 | 1.42e-18 | 88.2 |
MS.gene023558.t1 | MTR_1g027370 | 39.496 | 119 | 65 | 4 | 1 | 115 | 473 | 588 | 6.13e-18 | 86.3 |
MS.gene023558.t1 | MTR_1g028220 | 42.017 | 119 | 62 | 5 | 1 | 115 | 430 | 545 | 6.67e-18 | 85.9 |
MS.gene023558.t1 | MTR_7g082460 | 36.975 | 119 | 69 | 3 | 1 | 115 | 519 | 635 | 1.22e-17 | 85.5 |
MS.gene023558.t1 | MTR_6g083740 | 37.615 | 109 | 62 | 3 | 11 | 115 | 122 | 228 | 3.67e-17 | 80.9 |
MS.gene023558.t1 | MTR_2g036460 | 38.017 | 121 | 58 | 4 | 2 | 112 | 313 | 426 | 3.71e-17 | 83.6 |
MS.gene023558.t1 | MTR_1g027200 | 39.316 | 117 | 59 | 3 | 1 | 115 | 402 | 508 | 4.86e-17 | 83.2 |
MS.gene023558.t1 | MTR_1g027820 | 38.525 | 122 | 63 | 4 | 1 | 115 | 426 | 542 | 5.15e-17 | 83.2 |
MS.gene023558.t1 | MTR_1g027060 | 37.607 | 117 | 68 | 3 | 1 | 113 | 375 | 490 | 6.82e-17 | 82.8 |
MS.gene023558.t1 | MTR_2g036500 | 38.393 | 112 | 61 | 3 | 2 | 107 | 244 | 353 | 6.94e-17 | 82.4 |
MS.gene023558.t1 | MTR_0690s0010 | 36.220 | 127 | 75 | 3 | 1 | 124 | 407 | 530 | 9.97e-17 | 82.4 |
MS.gene023558.t1 | MTR_1g027890 | 36.752 | 117 | 70 | 2 | 1 | 115 | 272 | 386 | 1.41e-16 | 81.3 |
MS.gene023558.t1 | MTR_6g445600 | 36.220 | 127 | 75 | 3 | 1 | 124 | 433 | 556 | 1.55e-16 | 82.0 |
MS.gene023558.t1 | MTR_2g036430 | 38.679 | 106 | 58 | 4 | 2 | 102 | 228 | 331 | 5.36e-16 | 79.3 |
MS.gene023558.t1 | MTR_1g027150 | 36.975 | 119 | 68 | 4 | 1 | 115 | 428 | 543 | 5.65e-16 | 80.1 |
MS.gene023558.t1 | MTR_7g060570 | 34.746 | 118 | 70 | 3 | 1 | 115 | 509 | 622 | 5.99e-16 | 80.5 |
MS.gene023558.t1 | MTR_2g036440 | 40.179 | 112 | 59 | 4 | 2 | 107 | 245 | 354 | 9.14e-16 | 79.0 |
MS.gene023558.t1 | MTR_1g027960 | 37.815 | 119 | 67 | 4 | 1 | 115 | 447 | 562 | 1.33e-15 | 79.0 |
MS.gene023558.t1 | MTR_1g027040 | 36.667 | 120 | 68 | 4 | 1 | 115 | 430 | 546 | 1.60e-15 | 78.6 |
MS.gene023558.t1 | MTR_2g036490 | 35.238 | 105 | 63 | 1 | 13 | 112 | 312 | 416 | 4.12e-15 | 77.0 |
MS.gene023558.t1 | MTR_3g028650 | 37.288 | 118 | 69 | 3 | 1 | 115 | 428 | 543 | 7.43e-15 | 76.6 |
MS.gene023558.t1 | MTR_1g031400 | 60.345 | 58 | 22 | 1 | 1 | 57 | 189 | 246 | 8.18e-15 | 74.3 |
MS.gene023558.t1 | MTR_2g054870 | 39.683 | 126 | 51 | 7 | 1 | 106 | 278 | 398 | 2.29e-14 | 74.7 |
MS.gene023558.t1 | MTR_1g027700 | 36.975 | 119 | 68 | 4 | 1 | 115 | 203 | 318 | 4.57e-14 | 73.2 |
MS.gene023558.t1 | MTR_8g058250 | 34.146 | 164 | 93 | 5 | 1 | 154 | 737 | 895 | 8.54e-14 | 73.6 |
MS.gene023558.t1 | MTR_8g058250 | 34.146 | 164 | 93 | 5 | 1 | 154 | 833 | 991 | 8.93e-14 | 73.6 |
MS.gene023558.t1 | MTR_1g110160 | 37.288 | 118 | 49 | 5 | 4 | 115 | 466 | 564 | 1.12e-13 | 73.2 |
MS.gene023558.t1 | MTR_8g465150 | 34.188 | 117 | 71 | 2 | 1 | 113 | 686 | 800 | 1.21e-13 | 73.2 |
MS.gene023558.t1 | MTR_4g113710 | 38.136 | 118 | 52 | 6 | 1 | 102 | 276 | 388 | 1.44e-13 | 72.4 |
MS.gene023558.t1 | MTR_1g031470 | 42.529 | 87 | 48 | 1 | 29 | 113 | 1 | 87 | 4.42e-13 | 66.2 |
MS.gene023558.t1 | MTR_6g012810 | 35.833 | 120 | 68 | 4 | 1 | 115 | 770 | 885 | 9.21e-13 | 70.5 |
MS.gene023558.t1 | MTR_4g091570 | 36.364 | 132 | 74 | 5 | 1 | 128 | 924 | 1049 | 2.78e-12 | 68.9 |
MS.gene023558.t1 | MTR_8g465160 | 33.333 | 117 | 72 | 2 | 1 | 113 | 688 | 802 | 3.67e-12 | 68.6 |
MS.gene023558.t1 | MTR_8g028065 | 35.156 | 128 | 72 | 5 | 1 | 122 | 740 | 862 | 9.39e-12 | 67.4 |
MS.gene023558.t1 | MTR_4g081685 | 35.833 | 120 | 69 | 3 | 1 | 115 | 674 | 790 | 1.12e-11 | 67.0 |
MS.gene023558.t1 | MTR_6g043510 | 30.556 | 144 | 83 | 7 | 1 | 133 | 658 | 795 | 1.14e-11 | 67.0 |
MS.gene023558.t1 | MTR_6g463710 | 33.333 | 129 | 76 | 3 | 1 | 123 | 743 | 867 | 1.18e-11 | 67.0 |
MS.gene023558.t1 | MTR_6g057770 | 33.333 | 129 | 76 | 3 | 1 | 123 | 743 | 867 | 1.25e-11 | 67.0 |
MS.gene023558.t1 | MTR_0007s0020 | 33.577 | 137 | 72 | 5 | 1 | 127 | 743 | 870 | 1.35e-11 | 67.0 |
MS.gene023558.t1 | MTR_3g107070 | 34.043 | 141 | 75 | 4 | 1 | 136 | 641 | 768 | 1.49e-11 | 66.6 |
MS.gene023558.t1 | MTR_6g463700 | 32.031 | 128 | 76 | 3 | 1 | 123 | 712 | 833 | 1.92e-11 | 66.2 |
MS.gene023558.t1 | MTR_8g035560 | 34.375 | 128 | 70 | 6 | 1 | 117 | 550 | 674 | 2.14e-11 | 66.2 |
MS.gene023558.t1 | MTR_6g057750 | 32.031 | 128 | 76 | 3 | 1 | 123 | 757 | 878 | 2.29e-11 | 66.2 |
MS.gene023558.t1 | MTR_2g073650 | 37.273 | 110 | 62 | 2 | 1 | 105 | 831 | 938 | 2.38e-11 | 66.2 |
MS.gene023558.t1 | MTR_6g053000 | 32.847 | 137 | 73 | 5 | 1 | 127 | 508 | 635 | 3.03e-11 | 65.5 |
MS.gene023558.t1 | MTR_2g075250 | 34.483 | 116 | 68 | 3 | 1 | 111 | 835 | 947 | 3.33e-11 | 65.9 |
MS.gene023558.t1 | MTR_8g465590 | 33.333 | 120 | 70 | 3 | 1 | 115 | 8 | 122 | 3.35e-11 | 61.6 |
MS.gene023558.t1 | MTR_2g075250 | 34.483 | 116 | 68 | 3 | 1 | 111 | 740 | 852 | 3.40e-11 | 65.5 |
MS.gene023558.t1 | MTR_0074s0060 | 32.847 | 137 | 73 | 5 | 1 | 127 | 479 | 606 | 3.62e-11 | 65.5 |
MS.gene023558.t1 | MTR_1g012550 | 36.667 | 120 | 65 | 3 | 1 | 111 | 669 | 786 | 4.63e-11 | 65.1 |
MS.gene023558.t1 | MTR_3g011910 | 33.088 | 136 | 74 | 5 | 1 | 127 | 496 | 623 | 4.76e-11 | 65.1 |
MS.gene023558.t1 | MTR_8g061110 | 31.624 | 117 | 74 | 2 | 1 | 113 | 576 | 690 | 4.87e-11 | 65.1 |
MS.gene023558.t1 | MTR_2g074980 | 37.069 | 116 | 65 | 3 | 1 | 110 | 799 | 912 | 5.21e-11 | 65.1 |
MS.gene023558.t1 | MTR_2g075060 | 37.273 | 110 | 62 | 2 | 1 | 105 | 831 | 938 | 7.30e-11 | 64.7 |
MS.gene023558.t1 | MTR_4g123880 | 31.532 | 111 | 69 | 2 | 1 | 106 | 348 | 456 | 8.75e-11 | 63.9 |
MS.gene023558.t1 | MTR_2g074820 | 37.273 | 110 | 62 | 2 | 1 | 105 | 305 | 412 | 9.55e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene023558.t1 | AT5G38280 | 43.571 | 140 | 67 | 5 | 1 | 132 | 499 | 634 | 1.38e-24 | 106 |
MS.gene023558.t1 | AT5G38280 | 43.571 | 140 | 67 | 5 | 1 | 132 | 499 | 634 | 1.62e-24 | 106 |
MS.gene023558.t1 | AT5G38250 | 43.902 | 123 | 58 | 5 | 1 | 115 | 475 | 594 | 4.93e-23 | 101 |
MS.gene023558.t1 | AT5G38240 | 41.463 | 123 | 61 | 4 | 1 | 115 | 432 | 551 | 7.84e-23 | 100 |
MS.gene023558.t1 | AT5G38240 | 41.463 | 123 | 61 | 4 | 1 | 115 | 478 | 597 | 7.95e-23 | 101 |
MS.gene023558.t1 | AT5G38240 | 41.463 | 123 | 61 | 4 | 1 | 115 | 496 | 615 | 8.34e-23 | 101 |
MS.gene023558.t1 | AT1G67000 | 39.695 | 131 | 61 | 4 | 1 | 115 | 724 | 852 | 2.72e-22 | 99.8 |
MS.gene023558.t1 | AT5G39030 | 43.089 | 123 | 59 | 4 | 1 | 115 | 665 | 784 | 2.08e-21 | 97.1 |
MS.gene023558.t1 | AT5G39030 | 43.089 | 123 | 59 | 4 | 1 | 115 | 659 | 778 | 2.60e-21 | 96.7 |
MS.gene023558.t1 | AT1G66930 | 39.370 | 127 | 60 | 4 | 1 | 115 | 514 | 635 | 8.65e-20 | 92.0 |
MS.gene023558.t1 | AT1G66930 | 39.370 | 127 | 60 | 4 | 1 | 115 | 483 | 604 | 9.91e-20 | 91.7 |
MS.gene023558.t1 | AT4G18250 | 40.000 | 125 | 63 | 5 | 1 | 115 | 524 | 646 | 1.30e-19 | 91.7 |
MS.gene023558.t1 | AT1G66930 | 39.370 | 127 | 60 | 4 | 1 | 115 | 723 | 844 | 1.39e-19 | 91.7 |
MS.gene023558.t1 | AT5G39020 | 37.778 | 135 | 77 | 3 | 1 | 130 | 663 | 795 | 1.63e-19 | 91.3 |
MS.gene023558.t1 | AT5G38260 | 40.650 | 123 | 62 | 4 | 1 | 115 | 488 | 607 | 2.41e-19 | 90.5 |
MS.gene023558.t1 | AT1G70250 | 37.903 | 124 | 65 | 4 | 1 | 115 | 627 | 747 | 7.86e-19 | 89.4 |
MS.gene023558.t1 | AT1G66980 | 36.585 | 123 | 68 | 3 | 1 | 115 | 1001 | 1121 | 8.42e-19 | 89.4 |
MS.gene023558.t1 | AT1G66980 | 36.585 | 123 | 68 | 3 | 1 | 115 | 955 | 1075 | 8.46e-19 | 89.4 |
MS.gene023558.t1 | AT1G66980 | 36.585 | 123 | 68 | 3 | 1 | 115 | 972 | 1092 | 8.98e-19 | 89.4 |
MS.gene023558.t1 | AT1G66980 | 36.585 | 123 | 68 | 3 | 1 | 115 | 999 | 1119 | 9.56e-19 | 89.4 |
MS.gene023558.t1 | AT1G66910 | 37.143 | 140 | 69 | 5 | 1 | 125 | 512 | 647 | 1.95e-17 | 84.7 |
MS.gene023558.t1 | AT1G66920 | 39.516 | 124 | 60 | 5 | 1 | 115 | 475 | 592 | 1.97e-17 | 84.7 |
MS.gene023558.t1 | AT1G66910 | 37.143 | 140 | 69 | 5 | 1 | 125 | 515 | 650 | 2.01e-17 | 84.7 |
MS.gene023558.t1 | AT1G66920 | 39.516 | 124 | 60 | 5 | 1 | 115 | 449 | 566 | 2.06e-17 | 84.7 |
MS.gene023558.t1 | AT1G66920 | 39.516 | 124 | 60 | 5 | 1 | 115 | 467 | 584 | 2.17e-17 | 84.7 |
MS.gene023558.t1 | AT4G23320 | 35.294 | 119 | 69 | 2 | 1 | 113 | 352 | 468 | 1.94e-14 | 75.5 |
MS.gene023558.t1 | AT4G23320 | 35.294 | 119 | 69 | 2 | 1 | 113 | 352 | 468 | 1.94e-14 | 75.5 |
MS.gene023558.t1 | AT4G23320 | 35.294 | 119 | 69 | 2 | 1 | 113 | 373 | 489 | 2.21e-14 | 75.1 |
MS.gene023558.t1 | AT1G34300 | 32.877 | 146 | 86 | 6 | 1 | 138 | 652 | 793 | 2.32e-13 | 72.4 |
MS.gene023558.t1 | AT4G04540 | 41.379 | 116 | 62 | 5 | 1 | 115 | 522 | 632 | 3.81e-13 | 71.6 |
MS.gene023558.t1 | AT1G53430 | 39.252 | 107 | 58 | 2 | 1 | 102 | 838 | 942 | 4.03e-13 | 71.6 |
MS.gene023558.t1 | AT4G04540 | 41.379 | 116 | 62 | 5 | 1 | 115 | 493 | 603 | 4.59e-13 | 71.2 |
MS.gene023558.t1 | AT1G53430 | 39.252 | 107 | 58 | 2 | 1 | 102 | 797 | 901 | 4.71e-13 | 71.6 |
MS.gene023558.t1 | AT4G04490 | 38.281 | 128 | 65 | 5 | 1 | 117 | 509 | 633 | 7.23e-13 | 70.9 |
MS.gene023558.t1 | AT1G53440 | 38.318 | 107 | 59 | 2 | 1 | 102 | 836 | 940 | 1.17e-12 | 70.5 |
MS.gene023558.t1 | AT4G04570 | 38.400 | 125 | 69 | 5 | 1 | 124 | 517 | 634 | 1.23e-12 | 70.1 |
MS.gene023558.t1 | AT4G21230 | 35.772 | 123 | 65 | 3 | 1 | 115 | 502 | 618 | 1.59e-12 | 69.7 |
MS.gene023558.t1 | AT3G14840 | 37.383 | 107 | 60 | 2 | 1 | 102 | 841 | 945 | 3.94e-12 | 68.6 |
MS.gene023558.t1 | AT1G53420 | 36.364 | 110 | 63 | 2 | 1 | 105 | 793 | 900 | 4.18e-12 | 68.6 |
MS.gene023558.t1 | AT4G23290 | 33.613 | 119 | 71 | 2 | 1 | 113 | 489 | 605 | 1.01e-11 | 67.0 |
MS.gene023558.t1 | AT4G23290 | 33.613 | 119 | 71 | 2 | 1 | 113 | 532 | 648 | 1.21e-11 | 67.0 |
MS.gene023558.t1 | AT4G23280 | 31.933 | 119 | 73 | 2 | 1 | 113 | 463 | 579 | 5.75e-11 | 64.7 |
MS.gene023558.t1 | AT4G23280 | 31.933 | 119 | 73 | 2 | 1 | 113 | 513 | 629 | 6.00e-11 | 64.7 |
MS.gene023558.t1 | AT4G23280 | 31.933 | 119 | 73 | 2 | 1 | 113 | 511 | 627 | 6.37e-11 | 64.7 |
MS.gene023558.t1 | AT3G17420 | 32.432 | 111 | 68 | 2 | 1 | 106 | 323 | 431 | 9.87e-11 | 63.5 |
Find 55 sgRNAs with CRISPR-Local
Find 132 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAAGCTGATGTTTATAGTTT+TGG | 0.204782 | 4.3:+14460383 | MS.gene023558:CDS |
AAGATTATATAGAGAATTAT+TGG | 0.213784 | 4.3:+14460444 | MS.gene023558:CDS |
TGCCAGGTTAAGAGAGATTC+AGG | 0.266589 | 4.3:-14460680 | None:intergenic |
CAGATTCATTGACACAAGTT+TGG | 0.282213 | 4.3:+14461178 | MS.gene023558:intron |
GAAGGAAAATTGTTCAAGAT+TGG | 0.330399 | 4.3:+14462062 | MS.gene023558:CDS |
GGCAAGATTACTTTGCTAGA+TGG | 0.352379 | 4.3:+14460465 | MS.gene023558:CDS |
TTCATTGAGGGGCGATCATC+TGG | 0.364908 | 4.3:-14460596 | None:intergenic |
TGCTTACACAACCACCTCTA+TGG | 0.365363 | 4.3:+14462283 | MS.gene023558:CDS |
TTCCGATGAGGATGAAGTTT+CGG | 0.370322 | 4.3:+14461827 | MS.gene023558:CDS |
TCGTTTCTTTCTGCTTGGTT+TGG | 0.381570 | 4.3:+14462515 | MS.gene023558:CDS |
GCTTCAGATTTGCTGTTATG+AGG | 0.386096 | 4.3:+14462795 | MS.gene023558:CDS |
CTCGTGTCGTCGACAAATCA+AGG | 0.427985 | 4.3:+14462211 | MS.gene023558:CDS |
ATCTGCTAACGTCCTTTGCC+AGG | 0.438352 | 4.3:-14460696 | None:intergenic |
ATCGGAAATTGCAACTTTGT+CGG | 0.438491 | 4.3:-14461889 | None:intergenic |
ATCTATCACTTCATTCATTG+AGG | 0.443846 | 4.3:-14460609 | None:intergenic |
TGGAATGATGTTGATGGAAA+TGG | 0.446700 | 4.3:+14460403 | MS.gene023558:CDS |
ACGATTACACCTTCAATTGA+AGG | 0.455930 | 4.3:+14462044 | MS.gene023558:CDS |
GTTAAGAGAGATTCAGGATC+AGG | 0.460602 | 4.3:-14460674 | None:intergenic |
TTCGTTATCTGAATCTGTTA+CGG | 0.465411 | 4.3:+14462103 | MS.gene023558:CDS |
ATGGATTTATGATCAATTTG+AGG | 0.466465 | 4.3:+14460484 | MS.gene023558:CDS |
GATTCAGGATCAGGTGGAAG+TGG | 0.472491 | 4.3:-14460665 | None:intergenic |
GAAGGTGTAATCGTCGTGAT+TGG | 0.477945 | 4.3:-14462035 | None:intergenic |
ATGTTCTTGTACAGCAACTC+TGG | 0.487497 | 4.3:-14460344 | None:intergenic |
CTTCAGATTTGCTGTTATGA+GGG | 0.493610 | 4.3:+14462796 | MS.gene023558:CDS |
GAAGTGATAGATATGCTTGA+AGG | 0.495281 | 4.3:+14460620 | MS.gene023558:CDS |
TCTATCACTTCATTCATTGA+GGG | 0.502101 | 4.3:-14460608 | None:intergenic |
AACTTTGTCGGAATCTTCAA+CGG | 0.542646 | 4.3:-14461877 | None:intergenic |
ATCTGAATCTGTTACGGTGA+CGG | 0.551321 | 4.3:+14462109 | MS.gene023558:CDS |
AACCGAAACTTCATCCTCAT+CGG | 0.555405 | 4.3:-14461829 | None:intergenic |
CGTCGACAAATCAAGGAAAG+AGG | 0.556964 | 4.3:+14462218 | MS.gene023558:CDS |
AGTTTCATCTGAATCTTCAT+CGG | 0.566452 | 4.3:-14461907 | None:intergenic |
GAGGAGCTCAATTCTGCAGA+AGG | 0.570253 | 4.3:-14461930 | None:intergenic |
GGTGGAAGTGGAAGGTGTTG+TGG | 0.571266 | 4.3:-14460653 | None:intergenic |
AAGAGAGATTCAGGATCAGG+TGG | 0.571443 | 4.3:-14460671 | None:intergenic |
AAGAGGGCACCTAGCTGCAA+TGG | 0.571514 | 4.3:+14462235 | MS.gene023558:CDS |
CAGGATCAGGTGGAAGTGGA+AGG | 0.583464 | 4.3:-14460661 | None:intergenic |
TTGCAATCGTCTGAGACGAC+GGG | 0.584710 | 4.3:+14462260 | MS.gene023558:CDS |
AGAAAGAAACTTTACCATAG+AGG | 0.589858 | 4.3:-14462297 | None:intergenic |
GTTGCAATCGTCTGAGACGA+CGG | 0.592350 | 4.3:+14462259 | MS.gene023558:CDS |
ATCGTCGTGATTGGAAACAC+TGG | 0.595741 | 4.3:-14462026 | None:intergenic |
CTATCACTTCATTCATTGAG+GGG | 0.597502 | 4.3:-14460607 | None:intergenic |
ATCCTGAATCTCTCTTAACC+TGG | 0.601661 | 4.3:+14460678 | MS.gene023558:CDS |
GTCGACAAATCAAGGAAAGA+GGG | 0.609988 | 4.3:+14462219 | MS.gene023558:CDS |
AATCTCTCTTAACCTGGCAA+AGG | 0.613663 | 4.3:+14460684 | MS.gene023558:CDS |
TGGAAACACTGGAATAGCAT+CGG | 0.614957 | 4.3:-14462015 | None:intergenic |
TTGAACTGTGATCAAATCAG+AGG | 0.616683 | 4.3:-14461949 | None:intergenic |
AAGAAACTTTACCATAGAGG+TGG | 0.620189 | 4.3:-14462294 | None:intergenic |
ATTGCAACACCATTGCAGCT+AGG | 0.627459 | 4.3:-14462244 | None:intergenic |
GAGTTGCTGTACAAGAACAT+TGG | 0.631951 | 4.3:+14460347 | MS.gene023558:CDS |
TTTCCTGCAAAAGCACGTTG+TGG | 0.636258 | 4.3:+14462759 | MS.gene023558:CDS |
AGATACAAACAATGGAACAC+AGG | 0.640860 | 4.3:+14460514 | MS.gene023558:CDS |
GAAACAATAGATACAAACAA+TGG | 0.649053 | 4.3:+14460506 | MS.gene023558:CDS |
TTCCGTTGAAGATTCCGATG+AGG | 0.673326 | 4.3:+14461815 | MS.gene023558:intron |
TCTGCGATCGTGTATCAATG+TGG | 0.676695 | 4.3:+14462170 | MS.gene023558:CDS |
ATGATGTTGATGGAAATGGC+AGG | 0.716597 | 4.3:+14460407 | MS.gene023558:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAGATTATATAGAGAATTAT+TGG | + | chr4.3:14460444-14460463 | MS.gene023558:CDS | 15.0% |
!! | AATAGATTGATAAAAGATAA+TGG | - | chr4.3:14461646-14461665 | None:intergenic | 15.0% |
!! | ATAGTGAATAAATCATAGTT+AGG | + | chr4.3:14461521-14461540 | MS.gene023558:intron | 20.0% |
!!! | ACTTTTTTTTCCATGTATTT+TGG | + | chr4.3:14460810-14460829 | MS.gene023558:intron | 20.0% |
! | ATGGATTTATGATCAATTTG+AGG | + | chr4.3:14460484-14460503 | MS.gene023558:CDS | 25.0% |
! | CACAACTAAACTCTATATAT+AGG | + | chr4.3:14461602-14461621 | MS.gene023558:intron | 25.0% |
! | CGTAAATAAACTAATCATAC+AGG | + | chr4.3:14461227-14461246 | MS.gene023558:intron | 25.0% |
! | GAAACAATAGATACAAACAA+TGG | + | chr4.3:14460506-14460525 | MS.gene023558:CDS | 25.0% |
! | GTTAGGTTATATGTAAACTA+TGG | + | chr4.3:14461538-14461557 | MS.gene023558:intron | 25.0% |
! | TAATACTGTAATGTTCTTGA+AGG | + | chr4.3:14461264-14461283 | MS.gene023558:intron | 25.0% |
! | TTTAACCGAAAAATCTAAGA+TGG | - | chr4.3:14461125-14461144 | None:intergenic | 25.0% |
!! | AAAGCTGATGTTTATAGTTT+TGG | + | chr4.3:14460383-14460402 | MS.gene023558:CDS | 25.0% |
!! | AACAATTTTCCTTCAATTGA+AGG | - | chr4.3:14462056-14462075 | None:intergenic | 25.0% |
!! | ATTCTAACTCTAGTTTGATT+TGG | + | chr4.3:14461099-14461118 | MS.gene023558:intron | 25.0% |
!! | TCTGAATACGAATTCATTTT+TGG | + | chr4.3:14461975-14461994 | MS.gene023558:CDS | 25.0% |
!! | TTTTACGAAACCAAAATACA+TGG | - | chr4.3:14460823-14460842 | None:intergenic | 25.0% |
!!! | GAATTCATTTTTGGTAGTTT+CGG | + | chr4.3:14461984-14462003 | MS.gene023558:CDS | 25.0% |
AGAAAGAAACTTTACCATAG+AGG | - | chr4.3:14462300-14462319 | None:intergenic | 30.0% | |
AGTTATCATGCAAACGTTAA+AGG | + | chr4.3:14460768-14460787 | MS.gene023558:intron | 30.0% | |
AGTTTCATCTGAATCTTCAT+CGG | - | chr4.3:14461910-14461929 | None:intergenic | 30.0% | |
ATCACTATGACTATTATCCT+TGG | + | chr4.3:14461730-14461749 | MS.gene023558:intron | 30.0% | |
ATCTATCACTTCATTCATTG+AGG | - | chr4.3:14460612-14460631 | None:intergenic | 30.0% | |
ATGAATGAAATTGGCACTAT+TGG | + | chr4.3:14460738-14460757 | MS.gene023558:intron | 30.0% | |
ATTGCATGTTCCATATGTTT+CGG | + | chr4.3:14460998-14461017 | MS.gene023558:intron | 30.0% | |
CATATGGAACATGCAATATT+AGG | - | chr4.3:14460995-14461014 | None:intergenic | 30.0% | |
GAAGGAAAATTGTTCAAGAT+TGG | + | chr4.3:14462062-14462081 | MS.gene023558:CDS | 30.0% | |
GTTATCATGCAAACGTTAAA+GGG | + | chr4.3:14460769-14460788 | MS.gene023558:intron | 30.0% | |
TCACTATGACTATTATCCTT+GGG | + | chr4.3:14461731-14461750 | MS.gene023558:intron | 30.0% | |
TCGATGAGAATGAATGAAAT+TGG | + | chr4.3:14460729-14460748 | MS.gene023558:intron | 30.0% | |
TCTATCACTTCATTCATTGA+GGG | - | chr4.3:14460611-14460630 | None:intergenic | 30.0% | |
TTCGTTATCTGAATCTGTTA+CGG | + | chr4.3:14462103-14462122 | MS.gene023558:CDS | 30.0% | |
TTTAACGTTTGCATGATAAC+TGG | - | chr4.3:14460769-14460788 | None:intergenic | 30.0% | |
! | ATTTTTCGTTTCTTTCTGCT+TGG | + | chr4.3:14462510-14462529 | MS.gene023558:CDS | 30.0% |
! | TTTGGCCATCTTAGATTTTT+CGG | + | chr4.3:14461117-14461136 | MS.gene023558:intron | 30.0% |
!! | TCACTTTTACACAATCGTTT+TGG | + | chr4.3:14462705-14462724 | MS.gene023558:CDS | 30.0% |
!!! | TAGTTTTGGAATGATGTTGA+TGG | + | chr4.3:14460397-14460416 | MS.gene023558:CDS | 30.0% |
AACTTTGTCGGAATCTTCAA+CGG | - | chr4.3:14461880-14461899 | None:intergenic | 35.0% | |
AAGAAACTTTACCATAGAGG+TGG | - | chr4.3:14462297-14462316 | None:intergenic | 35.0% | |
AAGTAACCATAGAGACTCAT+AGG | - | chr4.3:14461675-14461694 | None:intergenic | 35.0% | |
ACGATTACACCTTCAATTGA+AGG | + | chr4.3:14462044-14462063 | MS.gene023558:CDS | 35.0% | |
AGATACAAACAATGGAACAC+AGG | + | chr4.3:14460514-14460533 | MS.gene023558:CDS | 35.0% | |
ATCGGAAATTGCAACTTTGT+CGG | - | chr4.3:14461892-14461911 | None:intergenic | 35.0% | |
CACAGTCTGAAGATATCAAA+TGG | + | chr4.3:14461028-14461047 | MS.gene023558:intron | 35.0% | |
CAGATTCATTGACACAAGTT+TGG | + | chr4.3:14461178-14461197 | MS.gene023558:intron | 35.0% | |
CATTTGATATCTTCAGACTG+TGG | - | chr4.3:14461030-14461049 | None:intergenic | 35.0% | |
CTATCACTTCATTCATTGAG+GGG | - | chr4.3:14460610-14460629 | None:intergenic | 35.0% | |
GAAGTGATAGATATGCTTGA+AGG | + | chr4.3:14460620-14460639 | MS.gene023558:CDS | 35.0% | |
TCATTGACAACTTAAGACCA+GGG | + | chr4.3:14461369-14461388 | MS.gene023558:intron | 35.0% | |
TTGAACTGTGATCAAATCAG+AGG | - | chr4.3:14461952-14461971 | None:intergenic | 35.0% | |
! | AAAGCAGAGCATTTAGCTAA+AGG | - | chr4.3:14460955-14460974 | None:intergenic | 35.0% |
! | AATATTAGGAGTATAGCCAG+AGG | - | chr4.3:14460981-14461000 | None:intergenic | 35.0% |
! | CTATGGTTAGTTAGTTAGCT+TGG | + | chr4.3:14461555-14461574 | MS.gene023558:intron | 35.0% |
! | TGGAATGATGTTGATGGAAA+TGG | + | chr4.3:14460403-14460422 | MS.gene023558:CDS | 35.0% |
!!! | GTGGTTTTAACCGAAACATA+TGG | - | chr4.3:14461011-14461030 | None:intergenic | 35.0% |
AACCGAAACTTCATCCTCAT+CGG | - | chr4.3:14461832-14461851 | None:intergenic | 40.0% | |
AAGTATGTTCAATCAGTCCC+TGG | - | chr4.3:14461389-14461408 | None:intergenic | 40.0% | |
AATCAAAGAAAACGCTCCAC+CGG | - | chr4.3:14462369-14462388 | None:intergenic | 40.0% | |
AATCTCTCTTAACCTGGCAA+AGG | + | chr4.3:14460684-14460703 | MS.gene023558:CDS | 40.0% | |
ACCACAGTCTGAATTCAGAA+TGG | + | chr4.3:14461145-14461164 | MS.gene023558:intron | 40.0% | |
ACCATTCTGAATTCAGACTG+TGG | - | chr4.3:14461149-14461168 | None:intergenic | 40.0% | |
ACGCTATATATCTCCAAGAG+AGG | + | chr4.3:14461051-14461070 | MS.gene023558:intron | 40.0% | |
ATCCTCATCGGAATCTTCAA+CGG | - | chr4.3:14461820-14461839 | None:intergenic | 40.0% | |
ATCCTGAATCTCTCTTAACC+TGG | + | chr4.3:14460678-14460697 | MS.gene023558:CDS | 40.0% | |
ATCTGAATCTGTTACGGTGA+CGG | + | chr4.3:14462109-14462128 | MS.gene023558:CDS | 40.0% | |
ATCTTTACAACGTTCGCCTA+AGG | + | chr4.3:14460923-14460942 | MS.gene023558:intron | 40.0% | |
ATGTTCTTGTACAGCAACTC+TGG | - | chr4.3:14460347-14460366 | None:intergenic | 40.0% | |
CGCTATATATCTCCAAGAGA+GGG | + | chr4.3:14461052-14461071 | MS.gene023558:intron | 40.0% | |
GAGTTGCTGTACAAGAACAT+TGG | + | chr4.3:14460347-14460366 | MS.gene023558:CDS | 40.0% | |
GATTCTCCTATGAGTCTCTA+TGG | + | chr4.3:14461666-14461685 | MS.gene023558:intron | 40.0% | |
GCTATATATCTCCAAGAGAG+GGG | + | chr4.3:14461053-14461072 | MS.gene023558:intron | 40.0% | |
GGCAAGATTACTTTGCTAGA+TGG | + | chr4.3:14460465-14460484 | MS.gene023558:CDS | 40.0% | |
GTCATTGACAACTTAAGACC+AGG | + | chr4.3:14461368-14461387 | MS.gene023558:intron | 40.0% | |
GTCGACAAATCAAGGAAAGA+GGG | + | chr4.3:14462219-14462238 | MS.gene023558:CDS | 40.0% | |
GTTAAGAGAGATTCAGGATC+AGG | - | chr4.3:14460677-14460696 | None:intergenic | 40.0% | |
TCGTTTCTTTCTGCTTGGTT+TGG | + | chr4.3:14462515-14462534 | MS.gene023558:CDS | 40.0% | |
TGGAAACACTGGAATAGCAT+CGG | - | chr4.3:14462018-14462037 | None:intergenic | 40.0% | |
TTACGAATCAGAGAATCCCA+AGG | - | chr4.3:14461750-14461769 | None:intergenic | 40.0% | |
TTCCGATGAGGATGAAGTTT+CGG | + | chr4.3:14461827-14461846 | MS.gene023558:CDS | 40.0% | |
! | ATGATGTTGATGGAAATGGC+AGG | + | chr4.3:14460407-14460426 | MS.gene023558:CDS | 40.0% |
! | GGATTCTCTGATTCGTAACA+TGG | + | chr4.3:14461752-14461771 | MS.gene023558:intron | 40.0% |
!! | TGAAGAAGCTTTTGAGAGCA+AGG | + | chr4.3:14462557-14462576 | MS.gene023558:CDS | 40.0% |
!! | TGGAGCGTTTTCTTTGATTC+TGG | + | chr4.3:14462370-14462389 | MS.gene023558:intron | 40.0% |
AAGAGAGATTCAGGATCAGG+TGG | - | chr4.3:14460674-14460693 | None:intergenic | 45.0% | |
AATAGTCATAGTGATCCGCG+AGG | - | chr4.3:14461725-14461744 | None:intergenic | 45.0% | |
AATGCTCTGCTTTGATCCTC+TGG | + | chr4.3:14460962-14460981 | MS.gene023558:intron | 45.0% | |
AGCTTCTGTAACAGCGTGTA+TGG | - | chr4.3:14462489-14462508 | None:intergenic | 45.0% | |
AGTGCATGGCGATATTCATG+AGG | - | chr4.3:14461699-14461718 | None:intergenic | 45.0% | |
ATCAAAGAAAACGCTCCACC+GGG | - | chr4.3:14462368-14462387 | None:intergenic | 45.0% | |
ATCGTCGTGATTGGAAACAC+TGG | - | chr4.3:14462029-14462048 | None:intergenic | 45.0% | |
ATTGCAACACCATTGCAGCT+AGG | - | chr4.3:14462247-14462266 | None:intergenic | 45.0% | |
CGTCATCATCTTCATCCCTA+GGG | - | chr4.3:14461791-14461810 | None:intergenic | 45.0% | |
CGTCGACAAATCAAGGAAAG+AGG | + | chr4.3:14462218-14462237 | MS.gene023558:CDS | 45.0% | |
TAGCTAAAGGCAGAAGCCTT+AGG | - | chr4.3:14460942-14460961 | None:intergenic | 45.0% | |
TCGGATTTCGTATTCGATCC+CGG | + | chr4.3:14462347-14462366 | MS.gene023558:intron | 45.0% | |
TCGTCATCATCTTCATCCCT+AGG | - | chr4.3:14461792-14461811 | None:intergenic | 45.0% | |
TCTGCGATCGTGTATCAATG+TGG | + | chr4.3:14462170-14462189 | MS.gene023558:CDS | 45.0% | |
TGCCAGGTTAAGAGAGATTC+AGG | - | chr4.3:14460683-14460702 | None:intergenic | 45.0% | |
TGCTTACACAACCACCTCTA+TGG | + | chr4.3:14462283-14462302 | MS.gene023558:CDS | 45.0% | |
TGTCACACGCTTCAGTTGTT+CGG | + | chr4.3:14462328-14462347 | MS.gene023558:intron | 45.0% | |
TTCCGTTGAAGATTCCGATG+AGG | + | chr4.3:14461815-14461834 | MS.gene023558:intron | 45.0% | |
! | GAAGGTGTAATCGTCGTGAT+TGG | - | chr4.3:14462038-14462057 | None:intergenic | 45.0% |
! | TTTCCTGCAAAAGCACGTTG+TGG | + | chr4.3:14462759-14462778 | MS.gene023558:CDS | 45.0% |
ATCACATCCCTTCCCGTTTG+TGG | + | chr4.3:14462417-14462436 | MS.gene023558:intron | 50.0% | |
ATCTGCTAACGTCCTTTGCC+AGG | - | chr4.3:14460699-14460718 | None:intergenic | 50.0% | |
CTCGTGTCGTCGACAAATCA+AGG | + | chr4.3:14462211-14462230 | MS.gene023558:CDS | 50.0% | |
GAGGAGCTCAATTCTGCAGA+AGG | - | chr4.3:14461933-14461952 | None:intergenic | 50.0% | |
GATTCAGGATCAGGTGGAAG+TGG | - | chr4.3:14460668-14460687 | None:intergenic | 50.0% | |
GATTTCGTATTCGATCCCGG+TGG | + | chr4.3:14462350-14462369 | MS.gene023558:intron | 50.0% | |
GGTATCAGAGCGATACCCTA+GGG | + | chr4.3:14461773-14461792 | MS.gene023558:intron | 50.0% | |
TGGTATCAGAGCGATACCCT+AGG | + | chr4.3:14461772-14461791 | MS.gene023558:intron | 50.0% | |
TTCATTGAGGGGCGATCATC+TGG | - | chr4.3:14460599-14460618 | None:intergenic | 50.0% | |
! | GTTGCAATCGTCTGAGACGA+CGG | + | chr4.3:14462259-14462278 | MS.gene023558:CDS | 50.0% |
! | TCTCCACAACGTGCTTTTGC+AGG | - | chr4.3:14462765-14462784 | None:intergenic | 50.0% |
! | TTGCAATCGTCTGAGACGAC+GGG | + | chr4.3:14462260-14462279 | MS.gene023558:CDS | 50.0% |
ACATCCCTTCCCGTTTGTGG+TGG | + | chr4.3:14462420-14462439 | MS.gene023558:intron | 55.0% | |
CAGGATCAGGTGGAAGTGGA+AGG | - | chr4.3:14460664-14460683 | None:intergenic | 55.0% | |
CCAACATGTGACCCCTCTCT+TGG | - | chr4.3:14461067-14461086 | None:intergenic | 55.0% | |
CCAAGAGAGGGGTCACATGT+TGG | + | chr4.3:14461064-14461083 | MS.gene023558:intron | 55.0% | |
CCAAGGGATCCACCACAAAC+GGG | - | chr4.3:14462432-14462451 | None:intergenic | 55.0% | |
CCCAAGGGATCCACCACAAA+CGG | - | chr4.3:14462433-14462452 | None:intergenic | 55.0% | |
CTTTCTTGCCGCGATCCCAA+GGG | - | chr4.3:14462448-14462467 | None:intergenic | 55.0% | |
GGATCCACCACAAACGGGAA+GGG | - | chr4.3:14462427-14462446 | None:intergenic | 55.0% | |
!! | AAGAGGGCACCTAGCTGCAA+TGG | + | chr4.3:14462235-14462254 | MS.gene023558:CDS | 55.0% |
!! | CCGTTTGTGGTGGATCCCTT+GGG | + | chr4.3:14462430-14462449 | MS.gene023558:intron | 55.0% |
!! | GGTGGAAGTGGAAGGTGTTG+TGG | - | chr4.3:14460656-14460675 | None:intergenic | 55.0% |
CCTTGGGATCGCGGCAAGAA+AGG | + | chr4.3:14462446-14462465 | MS.gene023558:intron | 60.0% | |
CCTTTCTTGCCGCGATCCCA+AGG | - | chr4.3:14462449-14462468 | None:intergenic | 60.0% | |
GGGATCCACCACAAACGGGA+AGG | - | chr4.3:14462428-14462447 | None:intergenic | 60.0% | |
TCGCCATGCACTCTTCCTCG+CGG | + | chr4.3:14461707-14461726 | MS.gene023558:intron | 60.0% | |
! | GATCCGCGAGGAAGAGTGCA+TGG | - | chr4.3:14461713-14461732 | None:intergenic | 60.0% |
! | TGGTGGATCCCTTGGGATCG+CGG | + | chr4.3:14462437-14462456 | MS.gene023558:intron | 60.0% |
!! | CCCGTTTGTGGTGGATCCCT+TGG | + | chr4.3:14462429-14462448 | MS.gene023558:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.3 | gene | 14460338 | 14462815 | 14460338 | ID=MS.gene023558 |
chr4.3 | mRNA | 14460338 | 14462815 | 14460338 | ID=MS.gene023558.t1;Parent=MS.gene023558 |
chr4.3 | exon | 14460338 | 14460708 | 14460338 | ID=MS.gene023558.t1.exon1;Parent=MS.gene023558.t1 |
chr4.3 | CDS | 14460338 | 14460708 | 14460338 | ID=cds.MS.gene023558.t1;Parent=MS.gene023558.t1 |
chr4.3 | exon | 14461181 | 14461227 | 14461181 | ID=MS.gene023558.t1.exon2;Parent=MS.gene023558.t1 |
chr4.3 | CDS | 14461181 | 14461227 | 14461181 | ID=cds.MS.gene023558.t1;Parent=MS.gene023558.t1 |
chr4.3 | exon | 14461826 | 14462304 | 14461826 | ID=MS.gene023558.t1.exon3;Parent=MS.gene023558.t1 |
chr4.3 | CDS | 14461826 | 14462304 | 14461826 | ID=cds.MS.gene023558.t1;Parent=MS.gene023558.t1 |
chr4.3 | exon | 14462504 | 14462815 | 14462504 | ID=MS.gene023558.t1.exon4;Parent=MS.gene023558.t1 |
chr4.3 | CDS | 14462504 | 14462815 | 14462504 | ID=cds.MS.gene023558.t1;Parent=MS.gene023558.t1 |
Gene Sequence |
Protein sequence |