AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene024126

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene024126.t1 MTR_7g081270 96.127 284 11 0 1 284 1 284 0.0 532
MS.gene024126.t1 MTR_2g049780 42.991 214 118 4 67 279 94 304 2.66e-46 158
MS.gene024126.t1 MTR_2g067230 32.852 277 169 8 6 279 37 299 2.50e-35 129
MS.gene024126.t1 MTR_5g041630 33.708 267 150 8 19 277 43 290 2.43e-31 119
MS.gene024126.t1 MTR_6g003960 26.636 214 110 4 75 283 420 591 7.62e-19 86.7
MS.gene024126.t1 MTR_2g034600 31.553 206 127 7 78 279 348 543 2.67e-16 79.0
MS.gene024126.t1 MTR_2g034600 31.553 206 127 7 78 279 287 482 2.84e-16 79.0
MS.gene024126.t1 MTR_2g034600 31.553 206 127 7 78 279 352 547 2.89e-16 79.0
MS.gene024126.t1 MTR_4g084630 29.032 217 134 5 77 283 116 322 2.06e-15 75.5
MS.gene024126.t1 MTR_5g094610 26.484 219 151 6 72 283 260 475 5.20e-15 75.1
MS.gene024126.t1 MTR_4g070060 27.184 206 143 5 77 279 384 585 1.33e-14 73.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene024126.t1 AT3G18870 55.422 249 107 3 36 284 29 273 6.61e-96 283
MS.gene024126.t1 AT2G03050 36.667 240 146 5 43 279 33 269 8.41e-44 150
MS.gene024126.t1 AT2G03050 36.667 240 146 5 43 279 32 268 8.47e-44 150
MS.gene024126.t1 AT2G34620 39.524 210 123 4 71 279 84 290 2.80e-43 150
MS.gene024126.t1 AT2G36000 34.440 241 146 8 44 279 74 307 3.41e-31 119
MS.gene024126.t1 AT2G36000 34.440 241 146 8 44 279 74 307 3.82e-31 118
MS.gene024126.t1 AT1G78930 27.358 212 117 3 72 283 404 578 2.41e-17 82.4
MS.gene024126.t1 AT5G55580 27.854 219 148 7 72 283 253 468 6.78e-16 77.8
MS.gene024126.t1 AT5G55580 27.854 219 148 7 72 283 147 362 9.36e-16 77.0
MS.gene024126.t1 AT4G14605 27.404 208 110 5 72 279 301 467 5.62e-15 75.1
MS.gene024126.t1 AT4G14605 27.404 208 110 5 72 279 301 467 5.62e-15 75.1
MS.gene024126.t1 AT4G38160 28.037 214 141 6 77 283 117 324 9.19e-15 73.6
MS.gene024126.t1 AT4G38160 28.037 214 141 6 77 283 117 324 9.19e-15 73.6
MS.gene024126.t1 AT4G38160 28.037 214 141 6 77 283 117 324 1.07e-14 73.9
MS.gene024126.t1 AT4G38160 28.037 214 141 6 77 283 117 324 1.45e-14 73.6
MS.gene024126.t1 AT2G21710 26.860 242 132 5 78 279 356 592 1.70e-13 70.9

Find 107 sgRNAs with CRISPR-Local

Find 126 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCAAGGTTGCCGGCGATAT+TGG 0.211818 7.1:+23587204 MS.gene024126:CDS
GCAAGGTTGCCGGCGATATT+GGG 0.271051 7.1:+23587205 MS.gene024126:CDS
TCCTGTTAGTTGGCCTGTTC+AGG 0.273978 7.1:-23587081 None:intergenic
GTGGCCGAAGTTTGTGTATT+TGG 0.292279 7.1:+23587249 MS.gene024126:CDS
GGAGGGTTGGTTTGAGGATG+TGG 0.308413 7.1:-23587027 None:intergenic
GGAGAGGGAGGTAGGGGAAA+TGG 0.315974 7.1:-23586906 None:intergenic
TCAAGGTGAGGTAGGTTGTT+TGG 0.324999 7.1:-23586776 None:intergenic
TTTGGCGTTGGTGGAAAGAT+TGG 0.342499 7.1:-23586604 None:intergenic
TTGATGTAACCGTTTCTGTT+AGG 0.373078 7.1:-23586683 None:intergenic
ACCTGAACAGGCCAACTAAC+AGG 0.386362 7.1:+23587080 MS.gene024126:CDS
GAGGATAAGAAGATGGAGTT+TGG 0.390964 7.1:-23586622 None:intergenic
GAATGTTTGTGCAAGGTTGC+CGG 0.395975 7.1:+23587195 MS.gene024126:CDS
GGGACAATGGTGGACTAGCC+GGG 0.397061 7.1:-23586867 None:intergenic
ACGTCGGTGAAGAGGAGGTT+AGG 0.409537 7.1:-23587001 None:intergenic
ATTTGAAAGAAAGAGGTGTT+AGG 0.409873 7.1:+23587365 MS.gene024126:CDS
GGAGGTAGGGGAAATGGAGG+TGG 0.413210 7.1:-23586900 None:intergenic
GAAAGAGATGGAGAGGGAGG+TGG 0.414641 7.1:+23587273 MS.gene024126:CDS
GAGGGAGGTAGGGGAAATGG+AGG 0.418156 7.1:-23586903 None:intergenic
GGAAGTGGAGGGTTGGTTTG+AGG 0.419169 7.1:-23587033 None:intergenic
ATGGAGGTGGTGAAGAGGTT+GGG 0.419906 7.1:-23586887 None:intergenic
AAGATGGAGTTTGGCGTTGG+TGG 0.422753 7.1:-23586613 None:intergenic
AGGTTTCTTGAGGAAGTGGT+TGG 0.427900 7.1:+23587151 MS.gene024126:CDS
AATGGAGGTGGTGAAGAGGT+TGG 0.433095 7.1:-23586888 None:intergenic
TGGGACAATGGTGGACTAGC+CGG 0.434927 7.1:-23586868 None:intergenic
TCTTTCAAATGCAAATGCCT+TGG 0.434972 7.1:-23587352 None:intergenic
TGAGAGGGAGGATAAGAAGA+TGG 0.437100 7.1:-23586629 None:intergenic
GGTTAGGGCAACGGAGGATA+AGG 0.439054 7.1:-23586985 None:intergenic
CAACTTCCTCGCGGAGGAAG+TGG 0.444919 7.1:-23587048 None:intergenic
CACTTCCTCCGCGAGGAAGT+TGG 0.448220 7.1:+23587049 MS.gene024126:CDS
TTGGAGTTAGTAACCTGAAC+AGG 0.454578 7.1:+23587068 MS.gene024126:CDS
AACCGTTTCTGTTAGGATAA+CGG 0.454941 7.1:-23586676 None:intergenic
CATTTGCATTTGAAAGAAAG+AGG 0.462822 7.1:+23587358 MS.gene024126:CDS
GAGGCGAGGAAGGTGAAGAC+GGG 0.462849 7.1:-23586929 None:intergenic
GGTTTCTTGAGGAAGTGGTT+GGG 0.466379 7.1:+23587152 MS.gene024126:CDS
GATGGTGAGGATGTGGTTGA+TGG 0.467160 7.1:-23586801 None:intergenic
GTTGAGGTTTCTTGAGGAAG+TGG 0.478350 7.1:+23587147 MS.gene024126:CDS
CGGTGAAAGAGTGGGATTTG+AGG 0.484295 7.1:-23586832 None:intergenic
TGGTGAAGAGGTTGGGACAA+TGG 0.486305 7.1:-23586880 None:intergenic
GGCGTTGGTGGAAAGATTGG+AGG 0.493018 7.1:-23586601 None:intergenic
TATAGAGTTTGATGATTGAG+AGG 0.494375 7.1:-23586645 None:intergenic
AGAAGATGCGCATGAGGTTG+AGG 0.495323 7.1:+23587131 MS.gene024126:CDS
GAGTTTGATGATTGAGAGGG+AGG 0.502670 7.1:-23586641 None:intergenic
GAGGAGGTCGGAGGCGAGGA+AGG 0.505171 7.1:-23586939 None:intergenic
TTGGGTTTAGTTTGGAGAAG+AGG 0.509649 7.1:+23587323 MS.gene024126:CDS
GGAGGCGAGGAAGGTGAAGA+CGG 0.509867 7.1:-23586930 None:intergenic
AACCGTTATCCTAACAGAAA+CGG 0.513485 7.1:+23586674 MS.gene024126:CDS
AAGAAGATGGAGTTTGGCGT+TGG 0.515595 7.1:-23586616 None:intergenic
TGATGGTGTCAAGGTGAGGT+AGG 0.516204 7.1:-23586784 None:intergenic
TCACCGAGGCCGACATCCCC+CGG 0.518020 7.1:+23586849 MS.gene024126:CDS
TGGCGAGGAGGTCGGAGGCG+AGG 0.519629 7.1:-23586943 None:intergenic
TTCACCAAATACACAAACTT+CGG 0.521850 7.1:-23587253 None:intergenic
AGATGCGCGTTCCTGTTAGT+TGG 0.527130 7.1:-23587091 None:intergenic
CGTCGGTGAAGAGGAGGTTA+GGG 0.540321 7.1:-23587000 None:intergenic
ATTTGGTGAAAGAGATGGAG+AGG 0.546039 7.1:+23587266 MS.gene024126:CDS
CACATCAACATTCTATTCAA+AGG 0.546735 7.1:-23587391 None:intergenic
TTTCTGTTAGGATAACGGTT+AGG 0.548102 7.1:-23586671 None:intergenic
TCGCGGAGGAAGTGGAGGGT+TGG 0.548697 7.1:-23587040 None:intergenic
GGTGAAAGAGATGGAGAGGG+AGG 0.550774 7.1:+23587270 MS.gene024126:CDS
ATAGAGTTTGATGATTGAGA+GGG 0.551408 7.1:-23586644 None:intergenic
CTTCCTCGCGGAGGAAGTGG+AGG 0.556212 7.1:-23587045 None:intergenic
TGAAGAGGAGGTTAGGGCAA+CGG 0.557020 7.1:-23586994 None:intergenic
CATGAGGTTGAGGTTTCTTG+AGG 0.557913 7.1:+23587141 MS.gene024126:CDS
CAAGGTTGCCGGCGATATTG+GGG 0.558881 7.1:+23587206 MS.gene024126:CDS
GGGAAATGGAGGTGGTGAAG+AGG 0.559827 7.1:-23586892 None:intergenic
TGTCGGCCTCGGTGAAAGAG+TGG 0.565492 7.1:-23586841 None:intergenic
ATGTGATGATGGTGAGGATG+TGG 0.567993 7.1:-23586808 None:intergenic
TGTGTATTTGGTGAAAGAGA+TGG 0.569565 7.1:+23587261 MS.gene024126:CDS
TGGAGAAGAGGATTGTTCCA+AGG 0.570343 7.1:+23587335 MS.gene024126:CDS
CTTTGAATAGAATGTTGATG+TGG 0.576656 7.1:+23587392 MS.gene024126:CDS
TTTGAATAGAATGTTGATGT+GGG 0.578021 7.1:+23587393 MS.gene024126:CDS
TTTGGTGAAAGAGATGGAGA+GGG 0.581785 7.1:+23587267 MS.gene024126:CDS
GGACAATGGTGGACTAGCCG+GGG 0.587321 7.1:-23586866 None:intergenic
TGAGGAATGTGATGATGGTG+AGG 0.588656 7.1:-23586814 None:intergenic
TGTGGTTTACGTCGGTGAAG+AGG 0.589418 7.1:-23587009 None:intergenic
TTCCACAGTGGCGAGGAGGT+CGG 0.594168 7.1:-23586951 None:intergenic
CACAGTGGCGAGGAGGTCGG+AGG 0.596584 7.1:-23586948 None:intergenic
AAGCGAGGAATGTTTGTGCA+AGG 0.596914 7.1:+23587188 MS.gene024126:CDS
GGATTTGAGGAATGTGATGA+TGG 0.599559 7.1:-23586819 None:intergenic
GGATGTGGTTGATGGTGTCA+AGG 0.602083 7.1:-23586793 None:intergenic
AGTGGTTGGGTTTACGTACG+AGG 0.606381 7.1:+23587165 MS.gene024126:CDS
ATGATAAGTTCTATGCAAAG+TGG 0.608848 7.1:+23587419 MS.gene024126:CDS
ACATCGTACCCCAATATCGC+CGG 0.610968 7.1:-23587214 None:intergenic
GGTTTACGTACGAGGAAGCG+AGG 0.621107 7.1:+23587173 MS.gene024126:CDS
GTCGGCCTCGGTGAAAGAGT+GGG 0.623113 7.1:-23586840 None:intergenic
GGTTTACGTCGGTGAAGAGG+AGG 0.624023 7.1:-23587006 None:intergenic
AGGCGAGGAAGGTGAAGACG+GGG 0.626763 7.1:-23586928 None:intergenic
GGCGATATTGGGGTACGATG+TGG 0.628281 7.1:+23587216 MS.gene024126:CDS
TGGTTGATGGTGTCAAGGTG+AGG 0.634445 7.1:-23586788 None:intergenic
GGCGAGGAAGGTGAAGACGG+GGG 0.649632 7.1:-23586927 None:intergenic
TTTGAGGATGTGGTTTACGT+CGG 0.649863 7.1:-23587017 None:intergenic
TTCCTCGCGGAGGAAGTGGA+GGG 0.650738 7.1:-23587044 None:intergenic
GAGAGTCTTCCACAGTGGCG+AGG 0.656874 7.1:-23586958 None:intergenic
CTCCGACCTCCTCGCCACTG+TGG 0.667154 7.1:+23586949 MS.gene024126:CDS
GCATCTTCTCAACACGCGTG+TGG 0.668292 7.1:+23587108 MS.gene024126:CDS
GACAATGGTGGACTAGCCGG+GGG 0.669422 7.1:-23586865 None:intergenic
AGTCTTCCACAGTGGCGAGG+AGG 0.672229 7.1:-23586955 None:intergenic
AGAGGAGGTTAGGGCAACGG+AGG 0.682019 7.1:-23586991 None:intergenic
GTGTGGAGAAGATGCGCATG+AGG 0.685391 7.1:+23587125 MS.gene024126:CDS
AACCCTCCACTTCCTCCGCG+AGG 0.690297 7.1:+23587042 MS.gene024126:CDS
TGAAGAGGTTGGGACAATGG+TGG 0.704696 7.1:-23586877 None:intergenic
ACGATGTGGAGAATAACTTG+TGG 0.706381 7.1:+23587230 MS.gene024126:CDS
GCCACTGTGGAAGACTCTCG+CGG 0.706536 7.1:+23586962 MS.gene024126:CDS
TACTAACTCCAACTTCCTCG+CGG 0.708475 7.1:-23587057 None:intergenic
TTGAATAGAATGTTGATGTG+GGG 0.710612 7.1:+23587394 MS.gene024126:CDS
TAACTCCAACTTCCTCGCGG+AGG 0.712692 7.1:-23587054 None:intergenic
GCCGCGAGAGTCTTCCACAG+TGG 0.750300 7.1:-23586963 None:intergenic
CAAATCCCACTCTTTCACCG+AGG 0.751367 7.1:+23586835 MS.gene024126:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTATGGTTAGTGATTTT+AGG - chr7.1:23586742-23586761 None:intergenic 20.0%
! TTTGAATAGAATGTTGATGT+GGG + chr7.1:23587393-23587412 MS.gene024126:CDS 25.0%
AAACTAAACCCAAAAAACTG+CGG - chr7.1:23587316-23587335 None:intergenic 30.0%
ATGATAAGTTCTATGCAAAG+TGG + chr7.1:23587419-23587438 MS.gene024126:CDS 30.0%
CACATCAACATTCTATTCAA+AGG - chr7.1:23587394-23587413 None:intergenic 30.0%
CATTTGCATTTGAAAGAAAG+AGG + chr7.1:23587358-23587377 MS.gene024126:CDS 30.0%
CTTTGAATAGAATGTTGATG+TGG + chr7.1:23587392-23587411 MS.gene024126:CDS 30.0%
TTCACCAAATACACAAACTT+CGG - chr7.1:23587256-23587275 None:intergenic 30.0%
TTGAATAGAATGTTGATGTG+GGG + chr7.1:23587394-23587413 MS.gene024126:CDS 30.0%
! ATAGAGTTTGATGATTGAGA+GGG - chr7.1:23586647-23586666 None:intergenic 30.0%
! TATAGAGTTTGATGATTGAG+AGG - chr7.1:23586648-23586667 None:intergenic 30.0%
! TTTTGTGTTGGGGTTTATTA+TGG - chr7.1:23586756-23586775 None:intergenic 30.0%
!! ATTTGAAAGAAAGAGGTGTT+AGG + chr7.1:23587365-23587384 MS.gene024126:CDS 30.0%
!! GTAATGGAGATTTTCATTGT+AGG - chr7.1:23586720-23586739 None:intergenic 30.0%
!! TGGTTAGTGATTTTAGGTAA+TGG - chr7.1:23586736-23586755 None:intergenic 30.0%
AACCGTTATCCTAACAGAAA+CGG + chr7.1:23586674-23586693 MS.gene024126:CDS 35.0%
AACCGTTTCTGTTAGGATAA+CGG - chr7.1:23586679-23586698 None:intergenic 35.0%
TCTTTCAAATGCAAATGCCT+TGG - chr7.1:23587355-23587374 None:intergenic 35.0%
TTGATGTAACCGTTTCTGTT+AGG - chr7.1:23586686-23586705 None:intergenic 35.0%
! TGTGTATTTGGTGAAAGAGA+TGG + chr7.1:23587261-23587280 MS.gene024126:CDS 35.0%
! TTTCTGTTAGGATAACGGTT+AGG - chr7.1:23586674-23586693 None:intergenic 35.0%
!!! AAGAAGTTTCCGCAGTTTTT+TGG + chr7.1:23587304-23587323 MS.gene024126:CDS 35.0%
!!! AGAAGTTTCCGCAGTTTTTT+GGG + chr7.1:23587305-23587324 MS.gene024126:CDS 35.0%
!!! AGGTTGTTTGGTTTTGTGTT+GGG - chr7.1:23586767-23586786 None:intergenic 35.0%
!!! GCAGTTTTTTGGGTTTAGTT+TGG + chr7.1:23587315-23587334 MS.gene024126:CDS 35.0%
!!! TAGGTTGTTTGGTTTTGTGT+TGG - chr7.1:23586768-23586787 None:intergenic 35.0%
ACGATGTGGAGAATAACTTG+TGG + chr7.1:23587230-23587249 MS.gene024126:CDS 40.0%
GAGGATAAGAAGATGGAGTT+TGG - chr7.1:23586625-23586644 None:intergenic 40.0%
GGATTTGAGGAATGTGATGA+TGG - chr7.1:23586822-23586841 None:intergenic 40.0%
TTGGAGTTAGTAACCTGAAC+AGG + chr7.1:23587068-23587087 MS.gene024126:CDS 40.0%
TTTGAGGATGTGGTTTACGT+CGG - chr7.1:23587020-23587039 None:intergenic 40.0%
TTTGGTGAAAGAGATGGAGA+GGG + chr7.1:23587267-23587286 MS.gene024126:CDS 40.0%
! ATTTGGTGAAAGAGATGGAG+AGG + chr7.1:23587266-23587285 MS.gene024126:CDS 40.0%
!! TTGGGTTTAGTTTGGAGAAG+AGG + chr7.1:23587323-23587342 MS.gene024126:CDS 40.0%
!!! GGTTGTTTGGTTTTGTGTTG+GGG - chr7.1:23586766-23586785 None:intergenic 40.0%
AAGAAGATGGAGTTTGGCGT+TGG - chr7.1:23586619-23586638 None:intergenic 45.0%
AAGCGAGGAATGTTTGTGCA+AGG + chr7.1:23587188-23587207 MS.gene024126:CDS 45.0%
AGGTTTCTTGAGGAAGTGGT+TGG + chr7.1:23587151-23587170 MS.gene024126:CDS 45.0%
CATGAGGTTGAGGTTTCTTG+AGG + chr7.1:23587141-23587160 MS.gene024126:CDS 45.0%
GAATGTTTGTGCAAGGTTGC+CGG + chr7.1:23587195-23587214 MS.gene024126:CDS 45.0%
GGTTTCTTGAGGAAGTGGTT+GGG + chr7.1:23587152-23587171 MS.gene024126:CDS 45.0%
GTGGCCGAAGTTTGTGTATT+TGG + chr7.1:23587249-23587268 MS.gene024126:CDS 45.0%
GTTGAGGTTTCTTGAGGAAG+TGG + chr7.1:23587147-23587166 MS.gene024126:CDS 45.0%
TACTAACTCCAACTTCCTCG+CGG - chr7.1:23587060-23587079 None:intergenic 45.0%
TCAAGGTGAGGTAGGTTGTT+TGG - chr7.1:23586779-23586798 None:intergenic 45.0%
TGAGAGGGAGGATAAGAAGA+TGG - chr7.1:23586632-23586651 None:intergenic 45.0%
TGGAGAAGAGGATTGTTCCA+AGG + chr7.1:23587335-23587354 MS.gene024126:CDS 45.0%
! GAGTTTGATGATTGAGAGGG+AGG - chr7.1:23586644-23586663 None:intergenic 45.0%
!! ATGTGATGATGGTGAGGATG+TGG - chr7.1:23586811-23586830 None:intergenic 45.0%
!! TGAGGAATGTGATGATGGTG+AGG - chr7.1:23586817-23586836 None:intergenic 45.0%
!! TTTGGCGTTGGTGGAAAGAT+TGG - chr7.1:23586607-23586626 None:intergenic 45.0%
AATGGAGGTGGTGAAGAGGT+TGG - chr7.1:23586891-23586910 None:intergenic 50.0%
ACATCGTACCCCAATATCGC+CGG - chr7.1:23587217-23587236 None:intergenic 50.0%
ACCTGAACAGGCCAACTAAC+AGG + chr7.1:23587080-23587099 MS.gene024126:CDS 50.0%
AGAAGATGCGCATGAGGTTG+AGG + chr7.1:23587131-23587150 MS.gene024126:CDS 50.0%
AGATGCGCGTTCCTGTTAGT+TGG - chr7.1:23587094-23587113 None:intergenic 50.0%
AGTGGTTGGGTTTACGTACG+AGG + chr7.1:23587165-23587184 MS.gene024126:CDS 50.0%
ATGGAGGTGGTGAAGAGGTT+GGG - chr7.1:23586890-23586909 None:intergenic 50.0%
CAAATCCCACTCTTTCACCG+AGG + chr7.1:23586835-23586854 MS.gene024126:CDS 50.0%
CGGTGAAAGAGTGGGATTTG+AGG - chr7.1:23586835-23586854 None:intergenic 50.0%
GATGGTGAGGATGTGGTTGA+TGG - chr7.1:23586804-23586823 None:intergenic 50.0%
TGAAGAGGAGGTTAGGGCAA+CGG - chr7.1:23586997-23587016 None:intergenic 50.0%
TGAAGAGGTTGGGACAATGG+TGG - chr7.1:23586880-23586899 None:intergenic 50.0%
TGGTGAAGAGGTTGGGACAA+TGG - chr7.1:23586883-23586902 None:intergenic 50.0%
TGTGGTTTACGTCGGTGAAG+AGG - chr7.1:23587012-23587031 None:intergenic 50.0%
! AAGATGGAGTTTGGCGTTGG+TGG - chr7.1:23586616-23586635 None:intergenic 50.0%
! TCCTGTTAGTTGGCCTGTTC+AGG - chr7.1:23587084-23587103 None:intergenic 50.0%
! TGATGGTGTCAAGGTGAGGT+AGG - chr7.1:23586787-23586806 None:intergenic 50.0%
!! GGATGTGGTTGATGGTGTCA+AGG - chr7.1:23586796-23586815 None:intergenic 50.0%
!! TGGTTGATGGTGTCAAGGTG+AGG - chr7.1:23586791-23586810 None:intergenic 50.0%
ACGTCGGTGAAGAGGAGGTT+AGG - chr7.1:23587004-23587023 None:intergenic 55.0%
CAAGGTTGCCGGCGATATTG+GGG + chr7.1:23587206-23587225 MS.gene024126:CDS 55.0%
CGTCGGTGAAGAGGAGGTTA+GGG - chr7.1:23587003-23587022 None:intergenic 55.0%
GAAAGAGATGGAGAGGGAGG+TGG + chr7.1:23587273-23587292 MS.gene024126:CDS 55.0%
GCAAGGTTGCCGGCGATATT+GGG + chr7.1:23587205-23587224 MS.gene024126:CDS 55.0%
GCATCTTCTCAACACGCGTG+TGG + chr7.1:23587108-23587127 MS.gene024126:CDS 55.0%
GGCGATATTGGGGTACGATG+TGG + chr7.1:23587216-23587235 MS.gene024126:CDS 55.0%
GGGAAATGGAGGTGGTGAAG+AGG - chr7.1:23586895-23586914 None:intergenic 55.0%
GGTGAAAGAGATGGAGAGGG+AGG + chr7.1:23587270-23587289 MS.gene024126:CDS 55.0%
GGTTAGGGCAACGGAGGATA+AGG - chr7.1:23586988-23587007 None:intergenic 55.0%
GGTTTACGTACGAGGAAGCG+AGG + chr7.1:23587173-23587192 MS.gene024126:CDS 55.0%
GGTTTACGTCGGTGAAGAGG+AGG - chr7.1:23587009-23587028 None:intergenic 55.0%
GTGTGGAGAAGATGCGCATG+AGG + chr7.1:23587125-23587144 MS.gene024126:CDS 55.0%
TAACTCCAACTTCCTCGCGG+AGG - chr7.1:23587057-23587076 None:intergenic 55.0%
TGCAAGGTTGCCGGCGATAT+TGG + chr7.1:23587204-23587223 MS.gene024126:CDS 55.0%
!! GGAAGTGGAGGGTTGGTTTG+AGG - chr7.1:23587036-23587055 None:intergenic 55.0%
!! GGAGGGTTGGTTTGAGGATG+TGG - chr7.1:23587030-23587049 None:intergenic 55.0%
!! GGCGTTGGTGGAAAGATTGG+AGG - chr7.1:23586604-23586623 None:intergenic 55.0%
!! TGGGACAATGGTGGACTAGC+CGG - chr7.1:23586871-23586890 None:intergenic 55.0%
AGAGGAGGTTAGGGCAACGG+AGG - chr7.1:23586994-23587013 None:intergenic 60.0%
AGGCGAGGAAGGTGAAGACG+GGG - chr7.1:23586931-23586950 None:intergenic 60.0%
AGTCTTCCACAGTGGCGAGG+AGG - chr7.1:23586958-23586977 None:intergenic 60.0%
CAACTTCCTCGCGGAGGAAG+TGG - chr7.1:23587051-23587070 None:intergenic 60.0%
CACTTCCTCCGCGAGGAAGT+TGG + chr7.1:23587049-23587068 MS.gene024126:CDS 60.0%
GAAGGTGAAGACGGGGGAGA+GGG - chr7.1:23586924-23586943 None:intergenic 60.0%
GAGAGTCTTCCACAGTGGCG+AGG - chr7.1:23586961-23586980 None:intergenic 60.0%
GAGGCGAGGAAGGTGAAGAC+GGG - chr7.1:23586932-23586951 None:intergenic 60.0%
GAGGGAGGTAGGGGAAATGG+AGG - chr7.1:23586906-23586925 None:intergenic 60.0%
GCCACTGTGGAAGACTCTCG+CGG + chr7.1:23586962-23586981 MS.gene024126:CDS 60.0%
GGAGAGGGAGGTAGGGGAAA+TGG - chr7.1:23586909-23586928 None:intergenic 60.0%
GGAGGCGAGGAAGGTGAAGA+CGG - chr7.1:23586933-23586952 None:intergenic 60.0%
GGAGGTAGGGGAAATGGAGG+TGG - chr7.1:23586903-23586922 None:intergenic 60.0%
GTCGGCCTCGGTGAAAGAGT+GGG - chr7.1:23586843-23586862 None:intergenic 60.0%
TGTCGGCCTCGGTGAAAGAG+TGG - chr7.1:23586844-23586863 None:intergenic 60.0%
TTCCACAGTGGCGAGGAGGT+CGG - chr7.1:23586954-23586973 None:intergenic 60.0%
TTCCTCGCGGAGGAAGTGGA+GGG - chr7.1:23587047-23587066 None:intergenic 60.0%
!! GACAATGGTGGACTAGCCGG+GGG - chr7.1:23586868-23586887 None:intergenic 60.0%
!! GGACAATGGTGGACTAGCCG+GGG - chr7.1:23586869-23586888 None:intergenic 60.0%
!! GGGACAATGGTGGACTAGCC+GGG - chr7.1:23586870-23586889 None:intergenic 60.0%
AACCCTCCACTTCCTCCGCG+AGG + chr7.1:23587042-23587061 MS.gene024126:CDS 65.0%
AAGACGGGGGAGAGGGAGGT+AGG - chr7.1:23586917-23586936 None:intergenic 65.0%
AGACGGGGGAGAGGGAGGTA+GGG - chr7.1:23586916-23586935 None:intergenic 65.0%
CTTCCTCGCGGAGGAAGTGG+AGG - chr7.1:23587048-23587067 None:intergenic 65.0%
GCCGCGAGAGTCTTCCACAG+TGG - chr7.1:23586966-23586985 None:intergenic 65.0%
GGAAGGTGAAGACGGGGGAG+AGG - chr7.1:23586925-23586944 None:intergenic 65.0%
GGCGAGGAAGGTGAAGACGG+GGG - chr7.1:23586930-23586949 None:intergenic 65.0%
TCGCGGAGGAAGTGGAGGGT+TGG - chr7.1:23587043-23587062 None:intergenic 65.0%
!! GTGGACTAGCCGGGGGATGT+CGG - chr7.1:23586861-23586880 None:intergenic 65.0%
CACAGTGGCGAGGAGGTCGG+AGG - chr7.1:23586951-23586970 None:intergenic 70.0%
CTCCGACCTCCTCGCCACTG+TGG + chr7.1:23586949-23586968 MS.gene024126:CDS 70.0%
GACGGGGGAGAGGGAGGTAG+GGG - chr7.1:23586915-23586934 None:intergenic 70.0%
GAGGAGGTCGGAGGCGAGGA+AGG - chr7.1:23586942-23586961 None:intergenic 70.0%
GGTGAAGACGGGGGAGAGGG+AGG - chr7.1:23586921-23586940 None:intergenic 70.0%
TAGCCGGGGGATGTCGGCCT+CGG - chr7.1:23586855-23586874 None:intergenic 70.0%
TCACCGAGGCCGACATCCCC+CGG + chr7.1:23586849-23586868 MS.gene024126:CDS 70.0%
TGGCGAGGAGGTCGGAGGCG+AGG - chr7.1:23586946-23586965 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 23586593 23587447 23586593 ID=MS.gene024126
chr7.1 mRNA 23586593 23587447 23586593 ID=MS.gene024126.t1;Parent=MS.gene024126
chr7.1 exon 23586593 23587447 23586593 ID=MS.gene024126.t1.exon1;Parent=MS.gene024126.t1
chr7.1 CDS 23586593 23587447 23586593 ID=cds.MS.gene024126.t1;Parent=MS.gene024126.t1
Gene Sequence

>MS.gene024126

ATGGTCTTCCTCCAATCTTTCCACCAACGCCAAACTCCATCTTCTTATCCTCCCTCTCAATCATCAAACTCTATAGTACCTAACCGTTATCCTAACAGAAACGGTTACATCAAGTTCAGAACAACCTACAATGAAAATCTCCATTACCTAAAATCACTAACCATAATAAACCCCAACACAAAACCAAACAACCTACCTCACCTTGACACCATCAACCACATCCTCACCATCATCACATTCCTCAAATCCCACTCTTTCACCGAGGCCGACATCCCCCGGCTAGTCCACCATTGTCCCAACCTCTTCACCACCTCCATTTCCCCTACCTCCCTCTCCCCCGTCTTCACCTTCCTCGCCTCCGACCTCCTCGCCACTGTGGAAGACTCTCGCGGCCTTATCCTCCGTTGCCCTAACCTCCTCTTCACCGACGTAAACCACATCCTCAAACCAACCCTCCACTTCCTCCGCGAGGAAGTTGGAGTTAGTAACCTGAACAGGCCAACTAACAGGAACGCGCATCTTCTCAACACGCGTGTGGAGAAGATGCGCATGAGGTTGAGGTTTCTTGAGGAAGTGGTTGGGTTTACGTACGAGGAAGCGAGGAATGTTTGTGCAAGGTTGCCGGCGATATTGGGGTACGATGTGGAGAATAACTTGTGGCCGAAGTTTGTGTATTTGGTGAAAGAGATGGAGAGGGAGGTGGAAGAGTTGAAGAAGTTTCCGCAGTTTTTTGGGTTTAGTTTGGAGAAGAGGATTGTTCCAAGGCATTTGCATTTGAAAGAAAGAGGTGTTAGGATTCCTTTGAATAGAATGTTGATGTGGGGTGATGATAAGTTCTATGCAAAGTGGAAGTGA
Protein sequence

>MS.gene024126.t1

MVFLQSFHQRQTPSSYPPSQSSNSIVPNRYPNRNGYIKFRTTYNENLHYLKSLTIINPNTKPNNLPHLDTINHILTIITFLKSHSFTEADIPRLVHHCPNLFTTSISPTSLSPVFTFLASDLLATVEDSRGLILRCPNLLFTDVNHILKPTLHFLREEVGVSNLNRPTNRNAHLLNTRVEKMRMRLRFLEEVVGFTYEEARNVCARLPAILGYDVENNLWPKFVYLVKEMEREVEELKKFPQFFGFSLEKRIVPRHLHLKERGVRIPLNRMLMWGDDKFYAKWK