AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene024235

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene024235.t1 MTR_7g083330 92.623 122 9 0 1 122 1 122 4.39e-84 244
MS.gene024235.t1 MTR_7g083360 74.286 105 27 0 18 122 10 114 1.24e-56 174
MS.gene024235.t1 MTR_7g083370 72.381 105 29 0 18 122 10 114 5.48e-54 166
MS.gene024235.t1 MTR_2g064090 34.211 114 72 2 16 126 4 117 1.99e-17 77.0
MS.gene024235.t1 MTR_4g089135 37.615 109 62 4 18 122 15 121 1.71e-16 74.7
MS.gene024235.t1 MTR_3g088110 32.787 122 75 4 16 134 5 122 2.27e-16 73.6
MS.gene024235.t1 MTR_6g477900 35.455 110 67 3 16 122 4 112 6.63e-16 71.6
MS.gene024235.t1 MTR_3g070030 34.783 138 83 6 1 134 1 135 8.39e-16 72.8
MS.gene024235.t1 MTR_7g085220 40.000 85 46 3 18 99 8 90 1.16e-15 72.4
MS.gene024235.t1 MTR_3g096920 40.659 91 49 3 12 99 1 89 1.50e-15 71.6
MS.gene024235.t1 MTR_5g076850 34.545 110 68 3 16 122 4 112 1.66e-15 72.4
MS.gene024235.t1 MTR_3g096920 40.659 91 49 3 12 99 1 89 1.88e-15 71.6
MS.gene024235.t1 MTR_3g064580 33.636 110 69 3 16 122 4 112 2.78e-15 71.6
MS.gene024235.t1 MTR_8g094580 38.462 91 51 3 12 99 1 89 3.15e-15 70.5
MS.gene024235.t1 MTR_5g041940 30.702 114 74 3 16 126 1 112 4.35e-15 70.1
MS.gene024235.t1 MTR_2g080010 34.862 109 65 4 18 122 15 121 5.16e-15 70.5
MS.gene024235.t1 MTR_8g023900 34.545 110 67 3 18 122 12 121 9.62e-15 70.1
MS.gene024235.t1 MTR_5g090970 43.333 90 45 4 13 99 14 100 1.35e-14 68.9
MS.gene024235.t1 MTR_5g069030 35.385 130 80 3 1 127 8 136 1.59e-14 69.3
MS.gene024235.t1 MTR_2157s0010 37.647 85 48 3 18 99 8 90 2.58e-14 67.8
MS.gene024235.t1 MTR_1g097300 32.353 136 88 3 2 134 3 137 2.80e-14 68.9
MS.gene024235.t1 MTR_3g109340 34.677 124 72 6 6 122 7 128 3.15e-14 68.2
MS.gene024235.t1 MTR_3g109340 34.677 124 72 6 6 122 7 128 3.19e-14 68.2
MS.gene024235.t1 MTR_1g008740 34.545 110 65 5 18 122 27 134 3.57e-14 68.2
MS.gene024235.t1 MTR_4g081870 29.204 113 75 3 17 126 8 118 3.94e-14 67.4
MS.gene024235.t1 MTR_1g008740 34.545 110 65 5 18 122 13 120 4.27e-14 67.8
MS.gene024235.t1 MTR_3g093040 34.188 117 73 3 9 122 99 214 7.15e-14 67.0
MS.gene024235.t1 MTR_2g093810 37.647 85 48 3 18 99 14 96 8.89e-14 67.0
MS.gene024235.t1 MTR_6g032770 34.234 111 67 4 16 122 16 124 1.53e-13 66.6
MS.gene024235.t1 MTR_3g093050 35.000 120 68 4 12 122 10 128 1.54e-13 66.6
MS.gene024235.t1 MTR_7g005280 36.937 111 61 5 16 122 13 118 1.64e-13 65.5
MS.gene024235.t1 MTR_3g093050 35.000 120 68 4 12 122 10 128 1.69e-13 66.6
MS.gene024235.t1 MTR_3g096140 30.769 117 77 3 21 134 10 125 1.89e-13 65.5
MS.gene024235.t1 MTR_5g040420 35.398 113 66 5 14 122 11 120 2.20e-13 65.9
MS.gene024235.t1 MTR_2g068920 34.959 123 64 6 10 122 14 130 2.28e-13 65.5
MS.gene024235.t1 MTR_2g068880 35.000 120 62 6 13 122 18 131 2.30e-13 65.9
MS.gene024235.t1 MTR_6g011860 32.231 121 77 3 5 122 2 120 3.01e-13 65.5
MS.gene024235.t1 MTR_2g078700 34.862 109 65 5 18 122 23 129 3.36e-13 65.5
MS.gene024235.t1 MTR_8g023840 34.545 110 67 3 18 122 11 120 3.81e-13 65.5
MS.gene024235.t1 MTR_3g096140 30.769 117 77 3 21 134 10 125 4.02e-13 65.1
MS.gene024235.t1 MTR_5g090970 41.111 90 46 4 13 99 14 99 4.43e-13 64.7
MS.gene024235.t1 MTR_1g090723 32.203 118 71 6 21 132 11 125 5.06e-13 65.1
MS.gene024235.t1 MTR_5g014300 30.233 129 81 3 15 134 3 131 5.56e-13 64.7
MS.gene024235.t1 MTR_6g012670 34.921 126 75 5 1 122 2 124 6.60e-13 64.3
MS.gene024235.t1 MTR_1g090723 32.203 118 71 6 21 132 11 125 7.03e-13 64.7
MS.gene024235.t1 MTR_1g090723 32.203 118 71 6 21 132 11 125 7.17e-13 64.7
MS.gene024235.t1 MTR_7g100990 36.458 96 50 4 7 99 6 93 9.33e-13 63.9
MS.gene024235.t1 MTR_1g069805 32.143 112 70 4 15 122 7 116 1.04e-12 63.5
MS.gene024235.t1 MTR_4g108760 33.636 110 67 5 16 122 15 121 1.13e-12 63.9
MS.gene024235.t1 MTR_6g084430 33.333 108 66 5 18 122 5 109 1.16e-12 63.9
MS.gene024235.t1 MTR_1g090720 37.647 85 50 2 18 99 42 126 1.95e-12 63.5
MS.gene024235.t1 MTR_4g036030 30.088 113 75 3 18 126 7 119 2.75e-12 62.8
MS.gene024235.t1 MTR_3g116070 34.545 110 65 5 18 122 23 130 3.54e-12 62.4
MS.gene024235.t1 MTR_4g098630 30.952 126 82 2 14 134 2 127 3.79e-12 62.4
MS.gene024235.t1 MTR_3g435150 33.628 113 69 5 13 122 11 120 5.18e-12 62.0
MS.gene024235.t1 MTR_8g023860 32.456 114 64 4 18 122 12 121 8.66e-12 61.6
MS.gene024235.t1 MTR_5g012080 29.358 109 73 3 18 122 7 115 8.95e-12 61.2
MS.gene024235.t1 MTR_7g097090 37.500 88 50 3 15 99 7 92 1.10e-11 60.8
MS.gene024235.t1 MTR_8g076110 32.110 109 69 4 18 122 6 113 1.47e-11 60.5
MS.gene024235.t1 MTR_8g467490 42.857 77 39 4 12 87 10 82 1.82e-11 60.5
MS.gene024235.t1 MTR_5g021710 32.110 109 69 4 18 122 8 115 2.71e-11 60.1
MS.gene024235.t1 MTR_4g101680 32.110 109 69 4 18 122 7 114 2.91e-11 60.1
MS.gene024235.t1 MTR_8g099750 32.110 109 66 4 12 116 7 111 5.85e-11 58.2
MS.gene024235.t1 MTR_2g062730 31.532 111 72 3 16 122 8 118 7.29e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene024235.t1 AT3G10500 37.168 113 67 3 18 127 9 120 7.38e-20 84.7
MS.gene024235.t1 AT5G13180 38.983 118 63 4 9 122 5 117 1.16e-19 82.0
MS.gene024235.t1 AT5G04410 35.398 113 69 3 18 127 9 120 1.25e-18 81.3
MS.gene024235.t1 AT2G24430 35.780 109 64 5 18 122 16 122 1.96e-16 74.3
MS.gene024235.t1 AT2G24430 35.780 109 64 5 18 122 16 122 1.96e-16 74.3
MS.gene024235.t1 AT2G33480 36.364 121 68 4 5 122 2 116 2.52e-16 73.6
MS.gene024235.t1 AT2G33480 36.364 121 68 4 5 122 2 116 2.66e-16 73.2
MS.gene024235.t1 AT1G65910 33.636 110 69 3 16 122 4 112 3.64e-16 74.3
MS.gene024235.t1 AT1G61110 35.185 108 65 3 18 122 16 121 4.78e-16 73.2
MS.gene024235.t1 AT1G54330 42.857 84 43 2 16 94 4 87 4.79e-16 73.2
MS.gene024235.t1 AT1G77450 41.379 87 46 3 16 99 8 92 6.71e-16 72.0
MS.gene024235.t1 AT3G17730 35.780 109 68 2 16 122 4 112 6.80e-16 72.0
MS.gene024235.t1 AT3G04070 35.354 99 59 3 18 113 10 106 8.07e-16 72.8
MS.gene024235.t1 AT3G04070 35.354 99 59 3 18 113 10 106 1.06e-15 72.4
MS.gene024235.t1 AT5G17260 34.545 110 68 3 16 122 4 112 1.31e-15 72.4
MS.gene024235.t1 AT1G01720 32.787 122 75 4 16 134 5 122 2.35e-15 70.9
MS.gene024235.t1 AT3G03200 35.455 110 67 3 16 122 4 112 3.29e-15 71.2
MS.gene024235.t1 AT1G76420 33.594 128 77 6 1 122 3 128 3.43e-15 70.9
MS.gene024235.t1 AT5G63790 40.230 87 47 3 16 99 48 132 5.10e-15 70.5
MS.gene024235.t1 AT5G08790 35.780 109 57 4 16 121 5 103 5.23e-15 70.1
MS.gene024235.t1 AT3G12910 36.752 117 63 5 13 122 17 129 5.46e-15 70.1
MS.gene024235.t1 AT5G63790 40.230 87 47 3 16 99 58 142 5.84e-15 70.1
MS.gene024235.t1 AT3G10490 36.842 114 66 5 18 127 27 138 1.70e-14 68.2
MS.gene024235.t1 AT5G39820 34.146 123 74 5 4 122 7 126 1.72e-14 68.9
MS.gene024235.t1 AT3G10480 36.842 114 66 5 18 127 27 138 1.91e-14 69.3
MS.gene024235.t1 AT3G10480 36.842 114 66 5 18 127 27 138 2.03e-14 69.3
MS.gene024235.t1 AT3G15510 36.190 105 61 4 22 122 21 123 2.19e-14 68.9
MS.gene024235.t1 AT3G15170 34.783 115 69 5 12 122 14 126 3.23e-14 68.2
MS.gene024235.t1 AT2G27300 33.333 120 74 6 6 122 3 119 3.80e-14 68.2
MS.gene024235.t1 AT1G69490 31.250 112 72 3 18 126 9 118 3.82e-14 67.4
MS.gene024235.t1 AT5G53950 35.398 113 67 5 14 122 13 123 3.88e-14 68.2
MS.gene024235.t1 AT5G46590 32.407 108 70 2 18 122 6 113 3.91e-14 67.8
MS.gene024235.t1 AT5G46590 32.407 108 70 2 18 122 6 113 4.14e-14 67.8
MS.gene024235.t1 AT5G18270 36.283 113 67 4 13 122 16 126 5.27e-14 67.8
MS.gene024235.t1 AT5G66300 34.862 109 66 4 18 122 12 119 8.81e-14 66.6
MS.gene024235.t1 AT5G14000 31.298 131 80 5 5 131 2 126 8.94e-14 64.7
MS.gene024235.t1 AT3G10490 36.842 114 66 5 18 127 27 138 9.70e-14 67.0
MS.gene024235.t1 AT5G18270 35.398 113 68 4 13 122 16 126 1.39e-13 66.6
MS.gene024235.t1 AT1G34180 34.286 105 65 3 21 122 19 122 1.57e-13 66.6
MS.gene024235.t1 AT5G61430 34.513 113 68 5 13 122 11 120 1.75e-13 66.2
MS.gene024235.t1 AT5G14000 31.746 126 76 5 10 131 7 126 1.81e-13 64.7
MS.gene024235.t1 AT1G26870 36.522 115 65 6 12 122 12 122 1.89e-13 66.2
MS.gene024235.t1 AT4G17980 29.825 114 75 3 18 126 6 119 2.10e-13 65.5
MS.gene024235.t1 AT1G34180 34.286 105 65 3 21 122 19 122 2.38e-13 66.2
MS.gene024235.t1 AT5G07680 34.545 110 66 5 16 122 15 121 3.58e-13 65.5
MS.gene024235.t1 AT4G17980 29.825 114 75 3 18 126 6 119 3.63e-13 65.1
MS.gene024235.t1 AT5G07680 34.545 110 66 5 16 122 1 107 3.71e-13 65.1
MS.gene024235.t1 AT3G29035 34.545 110 66 5 16 122 22 128 3.80e-13 65.1
MS.gene024235.t1 AT2G43000 32.824 131 78 6 13 137 14 140 4.57e-13 64.7
MS.gene024235.t1 AT1G34190 33.333 117 74 3 21 134 19 134 5.01e-13 65.1
MS.gene024235.t1 AT5G39610 33.600 125 69 6 1 122 11 124 5.07e-13 64.7
MS.gene024235.t1 AT3G04060 33.333 120 75 4 18 134 20 137 6.07e-13 64.7
MS.gene024235.t1 AT5G62380 30.435 115 75 4 12 122 1 114 1.27e-12 63.9
MS.gene024235.t1 AT5G62380 30.435 115 75 4 12 122 1 114 1.27e-12 63.9
MS.gene024235.t1 AT1G79580 30.081 123 82 3 16 134 15 137 2.31e-12 63.2
MS.gene024235.t1 AT1G79580 30.081 123 82 3 16 134 15 137 2.31e-12 63.2
MS.gene024235.t1 AT1G79580 30.081 123 82 3 16 134 15 137 2.31e-12 63.2
MS.gene024235.t1 AT1G79580 30.081 123 82 3 16 134 15 137 2.31e-12 63.2
MS.gene024235.t1 AT1G79580 30.081 123 82 3 16 134 15 137 2.31e-12 63.2
MS.gene024235.t1 AT1G02230 31.008 129 82 3 16 137 1 129 8.51e-12 61.6
MS.gene024235.t1 AT4G35580 34.259 108 67 3 18 122 9 115 9.97e-12 61.6
MS.gene024235.t1 AT1G33060 33.058 121 77 4 5 122 11 130 1.01e-11 61.6
MS.gene024235.t1 AT1G33060 33.058 121 77 4 5 122 11 130 1.08e-11 61.2
MS.gene024235.t1 AT1G52880 39.506 81 44 3 22 99 21 99 1.09e-11 61.2
MS.gene024235.t1 AT4G35580 34.259 108 67 3 18 122 9 115 1.12e-11 61.2
MS.gene024235.t1 AT4G35580 34.259 108 67 3 18 122 9 115 1.16e-11 61.2
MS.gene024235.t1 AT3G18400 35.185 108 64 5 18 122 5 109 1.37e-11 60.8
MS.gene024235.t1 AT4G36160 30.435 115 75 4 12 122 8 121 1.52e-11 60.8
MS.gene024235.t1 AT4G36160 30.435 115 75 4 12 122 4 117 1.68e-11 60.8
MS.gene024235.t1 AT4G36160 30.435 115 75 4 12 122 4 117 1.68e-11 60.8
MS.gene024235.t1 AT1G32510 36.667 90 50 3 15 99 3 90 1.80e-11 60.5
MS.gene024235.t1 AT5G09330 33.945 109 68 4 17 122 5 112 1.82e-11 60.8
MS.gene024235.t1 AT5G09330 33.945 109 68 4 17 122 5 112 1.82e-11 60.8
MS.gene024235.t1 AT5G09330 33.945 109 68 4 17 122 5 112 1.82e-11 60.8
MS.gene024235.t1 AT5G09330 33.945 109 68 4 17 122 5 112 1.82e-11 60.8
MS.gene024235.t1 AT5G09330 33.945 109 68 4 17 122 5 112 1.82e-11 60.8
MS.gene024235.t1 AT2G18060 31.193 109 70 4 18 122 9 116 2.64e-11 60.1
MS.gene024235.t1 AT2G18060 31.193 109 70 4 18 122 9 116 2.64e-11 60.1
MS.gene024235.t1 AT5G24590 32.407 108 70 2 18 122 13 120 3.25e-11 60.1
MS.gene024235.t1 AT3G49530 30.973 113 75 2 18 127 13 125 3.92e-11 59.7
MS.gene024235.t1 AT1G12260 29.204 113 76 3 18 126 7 119 4.28e-11 59.3
MS.gene024235.t1 AT1G71930 32.110 109 69 4 18 122 9 116 4.60e-11 59.3
MS.gene024235.t1 AT1G71930 32.110 109 69 4 18 122 9 116 4.60e-11 59.3
MS.gene024235.t1 AT1G34180 30.769 117 65 4 21 122 19 134 5.41e-11 59.3
MS.gene024235.t1 AT1G12260 29.204 113 76 3 18 126 7 119 7.41e-11 58.9
MS.gene024235.t1 AT1G34180 30.769 117 65 4 21 122 19 134 7.56e-11 58.9

Find 27 sgRNAs with CRISPR-Local

Find 40 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAAATTACCTGTTGGATTC+AGG 0.250804 7.2:+24005062 MS.gene024235:CDS
GGTACTATTTCTTTGATATC+AGG 0.295817 7.2:+24005428 MS.gene024235:CDS
GAACCGTAGGTTCGAAAATA+TGG 0.299363 7.2:+24005450 MS.gene024235:CDS
AAAGCATAGTGAGCTAGTTT+TGG 0.338409 7.2:+24005030 MS.gene024235:CDS
TCGAATTCTGACAGGACATT+TGG 0.373254 7.2:-24005151 None:intergenic
TGCGAGAAAGAACACATTAC+TGG 0.404537 7.2:+24005552 MS.gene024235:CDS
GGATCAAACCTGAATCCAAC+AGG 0.478056 7.2:-24005070 None:intergenic
ACAGGACATTTGGAAGAGGT+TGG 0.514459 7.2:-24005141 None:intergenic
AATATGGATGCAAGAAGAGC+TGG 0.518416 7.2:+24005466 MS.gene024235:CDS
GAGCCATGGAAGCTGCCAAA+AGG 0.533677 7.2:+24005187 MS.gene024235:CDS
GAAGAGCTGGAAATGGTGAA+TGG 0.539470 7.2:+24005479 MS.gene024235:CDS
TCTACAAGCTCATGATCAGT+TGG 0.547810 7.2:-24005091 None:intergenic
GAAATACATCGAATTCTGAC+AGG 0.551455 7.2:-24005159 None:intergenic
GGACCTCTTCAAAGCATATG+AGG 0.554252 7.2:+24005407 MS.gene024235:CDS
TCTGACAGGACATTTGGAAG+AGG 0.561916 7.2:-24005145 None:intergenic
ATGTATTTCAAACTGAGCCA+TGG 0.561975 7.2:+24005173 MS.gene024235:CDS
GATGGTATGAAATTACCTGT+TGG 0.565216 7.2:+24005055 MS.gene024235:CDS
GATGCAAGAAGAGCTGGAAA+TGG 0.566075 7.2:+24005472 MS.gene024235:CDS
GTACCTCATATGCTTTGAAG+AGG 0.594155 7.2:-24005410 None:intergenic
TCTTTGATATCAGGAACCGT+AGG 0.597083 7.2:+24005437 MS.gene024235:CDS
ACACATTACTGGAGAATGCA+AGG 0.609943 7.2:+24005563 MS.gene024235:CDS
GTGAATGGAGAATATATGAG+AGG 0.620604 7.2:+24005494 MS.gene024235:CDS
TTGTAGATTATTATCTGACG+AGG 0.656467 7.2:+24005107 MS.gene024235:CDS
GTCAAGCTCTGATGACACAA+TGG 0.657620 7.2:+24005591 MS.gene024235:CDS
GAGAATATATGAGAGGAACG+AGG 0.682363 7.2:+24005501 MS.gene024235:CDS
AAGCTCTGATGACACAATGG+AGG 0.685488 7.2:+24005594 MS.gene024235:CDS
CATTACTGGAGAATGCAAGG+AGG 0.767858 7.2:+24005566 MS.gene024235:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATCATAAGAAAAAGAATGAA+GGG - chr7.2:24005228-24005247 None:intergenic 20.0%
!! CCATCATAAGATTAATTAAA+GGG - chr7.2:24005321-24005340 None:intergenic 20.0%
!! TCCATCATAAGATTAATTAA+AGG - chr7.2:24005322-24005341 None:intergenic 20.0%
!!! AACACAAGGAAAATTTTAAA+AGG - chr7.2:24005290-24005309 None:intergenic 20.0%
!!! ACACAAGGAAAATTTTAAAA+GGG - chr7.2:24005289-24005308 None:intergenic 20.0%
! CCCTTTAATTAATCTTATGA+TGG + chr7.2:24005318-24005337 MS.gene024235:intron 25.0%
! GATCATAAGAAAAAGAATGA+AGG - chr7.2:24005229-24005248 None:intergenic 25.0%
!! CTATAATTTCACAAACCTTT+TGG - chr7.2:24005205-24005224 None:intergenic 25.0%
!!! ATTTGTTTTCTGCAGATAAT+AGG + chr7.2:24005386-24005405 MS.gene024235:intron 25.0%
TTGTAGATTATTATCTGACG+AGG + chr7.2:24005107-24005126 MS.gene024235:CDS 30.0%
! GGTACTATTTCTTTGATATC+AGG + chr7.2:24005428-24005447 MS.gene024235:CDS 30.0%
AAAGGGTTTCAAAGAACACA+AGG - chr7.2:24005304-24005323 None:intergenic 35.0%
ATGTATTTCAAACTGAGCCA+TGG + chr7.2:24005173-24005192 MS.gene024235:CDS 35.0%
GAAATACATCGAATTCTGAC+AGG - chr7.2:24005162-24005181 None:intergenic 35.0%
GATGGTATGAAATTACCTGT+TGG + chr7.2:24005055-24005074 MS.gene024235:CDS 35.0%
GTGAATGGAGAATATATGAG+AGG + chr7.2:24005494-24005513 MS.gene024235:CDS 35.0%
TGAAATTACCTGTTGGATTC+AGG + chr7.2:24005062-24005081 MS.gene024235:CDS 35.0%
! CATCCATATTTTCGAACCTA+CGG - chr7.2:24005456-24005475 None:intergenic 35.0%
!! AAAGCATAGTGAGCTAGTTT+TGG + chr7.2:24005030-24005049 MS.gene024235:CDS 35.0%
AATATGGATGCAAGAAGAGC+TGG + chr7.2:24005466-24005485 MS.gene024235:CDS 40.0%
ACACATTACTGGAGAATGCA+AGG + chr7.2:24005563-24005582 MS.gene024235:CDS 40.0%
GAACCGTAGGTTCGAAAATA+TGG + chr7.2:24005450-24005469 MS.gene024235:CDS 40.0%
GAGAATATATGAGAGGAACG+AGG + chr7.2:24005501-24005520 MS.gene024235:CDS 40.0%
TCGAATTCTGACAGGACATT+TGG - chr7.2:24005154-24005173 None:intergenic 40.0%
TCTACAAGCTCATGATCAGT+TGG - chr7.2:24005094-24005113 None:intergenic 40.0%
TCTTTGATATCAGGAACCGT+AGG + chr7.2:24005437-24005456 MS.gene024235:CDS 40.0%
TGCGAGAAAGAACACATTAC+TGG + chr7.2:24005552-24005571 MS.gene024235:CDS 40.0%
!! GTACCTCATATGCTTTGAAG+AGG - chr7.2:24005413-24005432 None:intergenic 40.0%
!!! AGTGAGCTAGTTTTGGAAGA+TGG + chr7.2:24005037-24005056 MS.gene024235:CDS 40.0%
ACAGGACATTTGGAAGAGGT+TGG - chr7.2:24005144-24005163 None:intergenic 45.0%
CATTACTGGAGAATGCAAGG+AGG + chr7.2:24005566-24005585 MS.gene024235:CDS 45.0%
GAAGAGCTGGAAATGGTGAA+TGG + chr7.2:24005479-24005498 MS.gene024235:CDS 45.0%
GATGCAAGAAGAGCTGGAAA+TGG + chr7.2:24005472-24005491 MS.gene024235:CDS 45.0%
GGACCTCTTCAAAGCATATG+AGG + chr7.2:24005407-24005426 MS.gene024235:CDS 45.0%
GGATCAAACCTGAATCCAAC+AGG - chr7.2:24005073-24005092 None:intergenic 45.0%
TCTGACAGGACATTTGGAAG+AGG - chr7.2:24005148-24005167 None:intergenic 45.0%
! AAACCTTTTGGCAGCTTCCA+TGG - chr7.2:24005193-24005212 None:intergenic 45.0%
! AAGCTCTGATGACACAATGG+AGG + chr7.2:24005594-24005613 MS.gene024235:CDS 45.0%
! GTCAAGCTCTGATGACACAA+TGG + chr7.2:24005591-24005610 MS.gene024235:CDS 45.0%
GAGCCATGGAAGCTGCCAAA+AGG + chr7.2:24005187-24005206 MS.gene024235:CDS 55.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 24005016 24005624 24005016 ID=MS.gene024235
chr7.2 mRNA 24005016 24005624 24005016 ID=MS.gene024235.t1;Parent=MS.gene024235
chr7.2 exon 24005016 24005208 24005016 ID=MS.gene024235.t1.exon1;Parent=MS.gene024235.t1
chr7.2 CDS 24005016 24005208 24005016 ID=cds.MS.gene024235.t1;Parent=MS.gene024235.t1
chr7.2 exon 24005401 24005624 24005401 ID=MS.gene024235.t1.exon2;Parent=MS.gene024235.t1
chr7.2 CDS 24005401 24005624 24005401 ID=cds.MS.gene024235.t1;Parent=MS.gene024235.t1
Gene Sequence

>MS.gene024235

ATGGCTGCTGATGAAAAGCATAGTGAGCTAGTTTTGGAAGATGGTATGAAATTACCTGTTGGATTCAGGTTTGATCCAACTGATCATGAGCTTGTAGATTATTATCTGACGAGGAAAGTCTGTAACCAACCTCTTCCAAATGTCCTGTCAGAATTCGATGTATTTCAAACTGAGCCATGGAAGCTGCCAAAAGGTTTGTGAAATTATAGCCCTTCATTCTTTTTCTTATGATCATTGTGTTTTATCAATAAAAATCAAATTTTTACATGACCCTTTTAAAATTTTCCTTGTGTTCTTTGAAACCCTTTAATTAATCTTATGATGGATTTTAATTAATCTTGTGAATGAACATTGTGTTTTAGACAATCTAATTTGTTTTCTGCAGATAATAGGACCTCTTCAAAGCATATGAGGTACTATTTCTTTGATATCAGGAACCGTAGGTTCGAAAATATGGATGCAAGAAGAGCTGGAAATGGTGAATGGAGAATATATGAGAGGAACGAGGAGTTTGCTCTTTCAAACAATCAATTGATTGCGAGAAAGAACACATTACTGGAGAATGCAAGGAGGAAGTCAAGCTCTGATGACACAATGGAGGATGCATGA
Protein sequence

>MS.gene024235.t1

MAADEKHSELVLEDGMKLPVGFRFDPTDHELVDYYLTRKVCNQPLPNVLSEFDVFQTEPWKLPKDNRTSSKHMRYYFFDIRNRRFENMDARRAGNGEWRIYERNEEFALSNNQLIARKNTLLENARRKSSSDDTMEDA