AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene024237

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene024237.t1 MTR_7g083360 90.210 143 14 0 1 143 1 143 3.18e-95 271
MS.gene024237.t1 MTR_7g083370 80.741 135 26 0 1 135 1 135 1.08e-77 227
MS.gene024237.t1 MTR_7g083330 65.753 146 50 0 3 148 11 156 1.59e-66 201
MS.gene024237.t1 MTR_3g088110 32.877 146 91 4 6 148 3 144 1.94e-22 90.5
MS.gene024237.t1 MTR_7g085220 29.487 156 97 4 3 147 1 154 2.05e-20 85.5
MS.gene024237.t1 MTR_3g109340 33.088 136 85 5 4 135 16 149 6.56e-20 84.3
MS.gene024237.t1 MTR_3g109340 33.088 136 85 5 4 135 16 149 6.99e-20 84.3
MS.gene024237.t1 MTR_2157s0010 33.088 136 84 4 3 133 1 134 1.13e-19 82.8
MS.gene024237.t1 MTR_8g059170 31.250 144 90 5 6 146 10 147 3.24e-19 82.4
MS.gene024237.t1 MTR_4g081870 32.117 137 86 5 4 136 3 136 4.18e-19 81.3
MS.gene024237.t1 MTR_7g085260 34.091 132 79 5 8 133 15 144 6.73e-19 82.0
MS.gene024237.t1 MTR_4g089135 34.375 128 78 4 10 133 15 140 1.15e-18 80.9
MS.gene024237.t1 MTR_2g080010 31.469 143 89 5 2 140 7 144 1.54e-18 80.5
MS.gene024237.t1 MTR_3g096920 30.822 146 94 4 6 148 3 144 2.51e-18 79.3
MS.gene024237.t1 MTR_3g096920 30.822 146 94 4 6 148 3 144 3.82e-18 79.3
MS.gene024237.t1 MTR_6g032770 32.624 141 88 5 4 139 12 150 4.47e-18 79.7
MS.gene024237.t1 MTR_7g005280 33.835 133 79 6 5 133 10 137 4.60e-18 78.2
MS.gene024237.t1 MTR_2g079990 30.496 141 89 5 6 143 12 146 6.55e-18 79.0
MS.gene024237.t1 MTR_2g079990 30.496 141 89 5 6 143 12 146 6.62e-18 79.0
MS.gene024237.t1 MTR_5g076850 33.588 131 83 3 6 133 2 131 6.78e-18 79.7
MS.gene024237.t1 MTR_8g094580 30.882 136 87 4 6 138 3 134 1.72e-17 77.0
MS.gene024237.t1 MTR_1g008740 32.639 144 87 6 7 145 10 148 2.35e-17 77.4
MS.gene024237.t1 MTR_3g064580 32.824 131 84 3 6 133 2 131 2.37e-17 77.8
MS.gene024237.t1 MTR_1g008740 32.639 144 87 6 7 145 24 162 2.82e-17 77.4
MS.gene024237.t1 MTR_6g477900 32.414 145 91 4 6 147 2 142 3.03e-17 75.9
MS.gene024237.t1 MTR_6g011860 33.333 135 85 3 9 140 14 146 4.84e-17 76.6
MS.gene024237.t1 MTR_5g041940 33.083 133 82 6 8 136 1 130 5.60e-17 75.5
MS.gene024237.t1 MTR_2g064090 31.298 131 86 3 6 133 2 131 5.65e-17 76.3
MS.gene024237.t1 MTR_6g012670 31.507 146 91 5 4 146 14 153 8.06e-17 75.5
MS.gene024237.t1 MTR_6g084430 32.308 130 82 4 7 133 2 128 1.38e-16 75.1
MS.gene024237.t1 MTR_5g040420 32.374 139 87 5 7 141 12 147 1.63e-16 75.1
MS.gene024237.t1 MTR_3g070030 34.328 134 82 5 3 133 12 142 1.81e-16 75.1
MS.gene024237.t1 MTR_3g116070 34.091 132 80 5 7 133 20 149 2.16e-16 74.7
MS.gene024237.t1 MTR_5g090970 34.848 132 78 5 7 133 16 144 4.23e-16 73.6
MS.gene024237.t1 MTR_5g090970 34.848 132 77 5 7 133 16 143 5.51e-16 73.2
MS.gene024237.t1 MTR_2g078700 32.061 131 83 5 7 133 20 148 5.95e-16 73.6
MS.gene024237.t1 MTR_7g100990 30.827 133 86 4 5 133 6 136 6.28e-16 73.2
MS.gene024237.t1 MTR_2g068880 32.609 138 85 5 3 133 14 150 6.64e-16 73.2
MS.gene024237.t1 MTR_2g093810 31.387 137 85 5 10 142 14 145 1.09e-15 72.4
MS.gene024237.t1 MTR_2g068920 33.333 138 84 5 2 133 14 149 1.71e-15 71.6
MS.gene024237.t1 MTR_7g011120 33.333 138 86 5 5 139 3 137 2.76e-15 71.2
MS.gene024237.t1 MTR_4g108760 30.769 130 84 5 7 133 14 140 3.36e-15 71.2
MS.gene024237.t1 MTR_2g062730 30.657 137 91 3 1 133 1 137 6.42e-15 70.5
MS.gene024237.t1 MTR_8g467490 32.609 138 86 5 7 140 12 146 7.35e-15 70.5
MS.gene024237.t1 MTR_8g099750 28.148 135 89 4 3 133 7 137 8.92e-15 68.9
MS.gene024237.t1 MTR_4g035590 32.877 146 91 6 1 142 1 143 1.51e-14 69.7
MS.gene024237.t1 MTR_1g069805 29.927 137 90 4 1 133 1 135 3.47e-14 68.2
MS.gene024237.t1 MTR_1g090720 30.709 127 84 3 10 133 42 167 6.07e-14 68.2
MS.gene024237.t1 MTR_2g064470 27.703 148 99 5 3 147 4 146 8.37e-14 67.4
MS.gene024237.t1 MTR_3g096140 30.597 134 88 4 3 133 1 132 1.00e-13 66.6
MS.gene024237.t1 MTR_5g069030 33.858 127 80 3 10 133 25 150 1.15e-13 67.4
MS.gene024237.t1 MTR_1g097300 30.159 126 84 3 13 135 22 146 1.19e-13 67.4
MS.gene024237.t1 MTR_2g086880 32.540 126 80 5 13 135 21 144 2.06e-13 66.6
MS.gene024237.t1 MTR_3g096140 31.452 124 81 3 13 133 10 132 2.79e-13 65.9
MS.gene024237.t1 MTR_2g086880 32.540 126 80 5 13 135 21 144 3.36e-13 65.9
MS.gene024237.t1 MTR_4g094302 34.127 126 73 5 10 133 11 128 9.08e-13 62.4
MS.gene024237.t1 MTR_4g094302 34.127 126 73 5 10 133 11 128 9.53e-13 62.8
MS.gene024237.t1 MTR_7g097090 30.657 137 89 4 1 133 1 135 9.62e-13 64.3
MS.gene024237.t1 MTR_5g021710 30.827 133 87 4 5 133 3 134 1.26e-12 64.3
MS.gene024237.t1 MTR_4g036030 30.469 128 84 4 10 133 7 133 1.27e-12 63.9
MS.gene024237.t1 MTR_5g012080 28.906 128 87 3 10 133 7 134 3.25e-12 63.2
MS.gene024237.t1 MTR_3g093040 30.233 129 86 3 8 133 106 233 3.65e-12 62.8
MS.gene024237.t1 MTR_8g076110 30.534 131 86 4 7 133 3 132 3.82e-12 62.8
MS.gene024237.t1 MTR_8g023900 29.457 129 85 5 10 133 12 139 5.21e-12 62.4
MS.gene024237.t1 MTR_3g093050 31.496 127 83 3 10 133 22 147 9.80e-12 62.0
MS.gene024237.t1 MTR_3g093050 31.496 127 83 3 10 133 22 147 1.09e-11 61.6
MS.gene024237.t1 MTR_2g086690 31.429 140 87 4 9 140 3 141 1.49e-11 60.5
MS.gene024237.t1 MTR_3g098810 27.737 137 89 4 3 133 7 139 1.64e-11 59.3
MS.gene024237.t1 MTR_4g134460 29.231 130 86 4 7 133 52 178 2.13e-11 60.8
MS.gene024237.t1 MTR_0036s0150 26.400 125 87 3 13 133 8 131 2.48e-11 60.5
MS.gene024237.t1 MTR_1g090723 29.104 134 87 5 13 142 11 140 2.55e-11 60.5
MS.gene024237.t1 MTR_1g090723 29.104 134 87 5 13 142 11 140 3.61e-11 60.1
MS.gene024237.t1 MTR_1g090723 29.104 134 87 5 13 142 11 140 3.61e-11 60.1
MS.gene024237.t1 MTR_3g098810 27.737 137 89 4 3 133 7 139 4.38e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene024237.t1 AT1G77450 31.126 151 97 4 1 148 1 147 3.39e-21 86.7
MS.gene024237.t1 AT5G18270 36.434 129 77 4 8 133 19 145 4.51e-21 87.4
MS.gene024237.t1 AT5G18270 35.659 129 78 4 8 133 19 145 7.22e-21 87.0
MS.gene024237.t1 AT5G13180 35.556 135 78 5 3 133 7 136 1.95e-20 84.3
MS.gene024237.t1 AT1G61110 31.690 142 89 4 2 140 8 144 4.59e-20 84.7
MS.gene024237.t1 AT3G04070 29.870 154 99 4 1 147 1 152 4.79e-20 84.7
MS.gene024237.t1 AT3G04070 29.870 154 99 4 1 147 1 152 6.59e-20 84.7
MS.gene024237.t1 AT1G76420 35.115 131 79 5 7 133 19 147 1.31e-19 83.6
MS.gene024237.t1 AT5G63790 33.088 136 84 4 6 138 46 177 1.42e-19 83.2
MS.gene024237.t1 AT5G63790 33.088 136 84 4 6 138 56 187 1.74e-19 83.2
MS.gene024237.t1 AT5G08790 32.353 136 85 4 6 138 3 134 3.47e-19 81.6
MS.gene024237.t1 AT5G04410 32.836 134 83 4 10 140 9 138 7.28e-19 82.4
MS.gene024237.t1 AT3G10500 33.071 127 81 3 10 133 9 134 1.77e-18 81.3
MS.gene024237.t1 AT2G24430 34.351 131 80 5 7 133 13 141 2.25e-18 79.7
MS.gene024237.t1 AT2G24430 34.351 131 80 5 7 133 13 141 2.25e-18 79.7
MS.gene024237.t1 AT3G15500 31.206 141 88 5 6 143 10 144 3.21e-18 79.3
MS.gene024237.t1 AT3G17730 31.973 147 94 4 6 147 2 147 4.16e-18 78.2
MS.gene024237.t1 AT5G53950 33.594 128 79 5 10 133 17 142 7.39e-18 79.0
MS.gene024237.t1 AT1G01720 32.090 134 84 4 8 138 5 134 8.91e-18 77.8
MS.gene024237.t1 AT5G17260 32.824 131 84 3 6 133 2 131 1.04e-17 79.0
MS.gene024237.t1 AT1G52890 31.915 141 87 5 6 143 10 144 1.17e-17 77.8
MS.gene024237.t1 AT3G03200 33.588 131 83 3 6 133 2 131 1.32e-17 78.6
MS.gene024237.t1 AT1G65910 32.061 131 85 3 6 133 2 131 1.79e-17 78.6
MS.gene024237.t1 AT3G04060 32.558 129 82 4 8 133 18 144 3.47e-17 77.0
MS.gene024237.t1 AT3G29035 33.077 130 81 5 7 133 21 147 3.49e-17 76.6
MS.gene024237.t1 AT1G69490 32.331 133 84 5 4 133 3 132 5.44e-17 75.5
MS.gene024237.t1 AT5G39610 31.618 136 87 5 1 133 11 143 6.49e-17 75.5
MS.gene024237.t1 AT4G27410 30.534 131 85 4 6 133 10 137 8.29e-17 75.5
MS.gene024237.t1 AT3G15510 32.258 124 78 4 14 133 21 142 1.86e-16 75.1
MS.gene024237.t1 AT2G33480 32.812 128 75 5 10 133 15 135 1.89e-16 73.9
MS.gene024237.t1 AT5G61430 32.308 130 82 5 7 133 13 139 1.94e-16 74.7
MS.gene024237.t1 AT2G33480 32.812 128 75 5 10 133 15 135 1.98e-16 73.9
MS.gene024237.t1 AT5G07680 31.655 139 88 6 5 139 12 147 1.99e-16 74.7
MS.gene024237.t1 AT5G39820 31.159 138 88 5 7 140 18 152 2.12e-16 74.7
MS.gene024237.t1 AT5G07680 32.353 136 85 6 8 139 1 133 2.73e-16 74.3
MS.gene024237.t1 AT2G43000 33.846 130 79 5 7 133 16 141 2.87e-16 73.6
MS.gene024237.t1 AT3G15170 32.061 131 83 5 7 133 17 145 2.99e-16 73.9
MS.gene024237.t1 AT2G27300 35.714 126 76 5 13 135 17 140 6.81e-16 73.2
MS.gene024237.t1 AT3G10490 33.088 136 85 5 2 133 19 152 7.21e-16 72.0
MS.gene024237.t1 AT3G12910 33.571 140 82 5 8 140 20 155 3.00e-15 71.2
MS.gene024237.t1 AT3G10480 33.088 136 85 5 2 133 19 152 3.36e-15 71.6
MS.gene024237.t1 AT3G10480 33.088 136 85 5 2 133 19 152 3.67e-15 71.6
MS.gene024237.t1 AT1G26870 32.576 132 80 6 7 133 14 141 3.73e-15 71.6
MS.gene024237.t1 AT1G54330 32.331 133 82 4 6 133 2 131 3.96e-15 70.9
MS.gene024237.t1 AT3G10490 33.088 136 85 5 2 133 19 152 9.52e-15 70.5
MS.gene024237.t1 AT4G27410 27.397 146 87 4 6 133 10 154 1.31e-14 69.7
MS.gene024237.t1 AT4G17980 28.148 135 93 3 10 140 6 140 3.38e-14 67.8
MS.gene024237.t1 AT4G36160 29.927 137 91 4 1 133 1 136 4.96e-14 68.2
MS.gene024237.t1 AT4G36160 29.927 137 91 4 1 133 1 136 4.96e-14 68.2
MS.gene024237.t1 AT4G36160 29.927 137 91 4 1 133 5 140 5.16e-14 68.2
MS.gene024237.t1 AT4G17980 28.148 135 93 3 10 140 6 140 5.61e-14 67.8
MS.gene024237.t1 AT1G34190 29.927 137 87 4 13 141 19 154 7.74e-14 67.8
MS.gene024237.t1 AT1G34180 30.159 126 84 3 13 135 19 143 9.31e-14 67.8
MS.gene024237.t1 AT4G10350 30.986 142 93 4 4 141 3 143 1.35e-13 67.0
MS.gene024237.t1 AT1G34180 30.159 126 84 3 13 135 19 143 1.66e-13 67.0
MS.gene024237.t1 AT5G14000 25.503 149 100 6 3 146 8 150 2.14e-13 63.9
MS.gene024237.t1 AT4G35580 32.283 127 82 3 10 133 9 134 2.99e-13 66.2
MS.gene024237.t1 AT5G66300 31.538 130 84 4 8 133 10 138 3.34e-13 65.5
MS.gene024237.t1 AT1G33060 32.283 127 82 4 10 133 24 149 5.06e-13 65.5
MS.gene024237.t1 AT1G33060 32.283 127 82 4 10 133 24 149 5.11e-13 65.5
MS.gene024237.t1 AT5G46590 27.559 127 89 2 10 133 6 132 5.24e-13 65.1
MS.gene024237.t1 AT5G46590 27.559 127 89 2 10 133 6 132 6.12e-13 64.7
MS.gene024237.t1 AT4G35580 32.283 127 82 3 10 133 9 134 6.85e-13 65.1
MS.gene024237.t1 AT4G35580 32.283 127 82 3 10 133 9 134 7.13e-13 65.1
MS.gene024237.t1 AT5G14000 26.087 138 92 5 3 135 8 140 1.16e-12 63.2
MS.gene024237.t1 AT2G18060 30.000 130 86 4 8 133 7 135 1.24e-12 64.3
MS.gene024237.t1 AT2G18060 30.000 130 86 4 8 133 7 135 1.24e-12 64.3
MS.gene024237.t1 AT5G04395 29.012 162 97 6 1 145 19 179 1.44e-12 62.4
MS.gene024237.t1 AT5G24590 30.709 127 85 2 10 133 13 139 2.10e-12 63.9
MS.gene024237.t1 AT5G64060 28.244 131 90 3 6 133 2 131 2.21e-12 63.5
MS.gene024237.t1 AT1G71930 29.008 131 88 4 7 133 6 135 3.68e-12 62.8
MS.gene024237.t1 AT1G71930 29.008 131 88 4 7 133 6 135 3.68e-12 62.8
MS.gene024237.t1 AT5G64530 30.233 129 78 4 8 135 1 118 3.94e-12 60.8
MS.gene024237.t1 AT1G32870 29.457 129 89 2 10 137 10 137 9.24e-12 62.0
MS.gene024237.t1 AT1G56010 27.941 136 91 4 2 133 11 143 9.82e-12 61.6
MS.gene024237.t1 AT5G64530 30.233 129 78 4 8 135 1 118 1.08e-11 60.1
MS.gene024237.t1 AT1G32870 29.457 129 89 2 10 137 46 173 1.18e-11 61.6
MS.gene024237.t1 AT1G32870 29.457 129 89 2 10 137 10 137 1.22e-11 61.6
MS.gene024237.t1 AT5G50820 29.630 135 85 3 2 133 9 136 2.26e-11 59.3
MS.gene024237.t1 AT3G44290 27.692 130 89 4 13 139 17 144 5.22e-11 58.9
MS.gene024237.t1 AT3G44290 27.692 130 89 4 13 139 17 144 8.61e-11 58.9

Find 35 sgRNAs with CRISPR-Local

Find 50 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGATCTACCTGCTGGATTC+AGG 0.237662 7.2:+23972207 MS.gene024237:CDS
TGCAGAAAATAGATACTCTT+TGG 0.273533 7.2:+23972636 MS.gene024237:intron
GAACCGTAGGTTCGAGAATA+TGG 0.296257 7.2:+23972690 MS.gene024237:CDS
TCAAATTCTGACATGACATT+TGG 0.343033 7.2:-23972296 None:intergenic
ATTGTATTCCTTACCCTAGT+TGG 0.360957 7.2:-23972892 None:intergenic
GAAAGAACAGATATGTTTAC+TGG 0.378161 7.2:+23972797 MS.gene024237:CDS
ATAGATACTCTTTGGAGAAT+AGG 0.394512 7.2:+23972644 MS.gene024237:CDS
AGTACTATTTCTTTGATCTC+AGG 0.411387 7.2:+23972668 MS.gene024237:CDS
ACAGATATGTTTACTGGATA+GGG 0.475339 7.2:+23972803 MS.gene024237:CDS
TCTGACATGACATTTGGAAA+AGG 0.488494 7.2:-23972290 None:intergenic
ACTGAGCCATGGAGGCTGCC+AGG 0.492712 7.2:+23972329 MS.gene024237:CDS
AACAGATATGTTTACTGGAT+AGG 0.498598 7.2:+23972802 MS.gene024237:CDS
TCAACAAGTACGCGATCGGT+TGG 0.506848 7.2:-23972236 None:intergenic
AAACCTCCTGGCAGCCTCCA+TGG 0.506870 7.2:-23972335 None:intergenic
GCTGAGGTTGATCTACCTGC+TGG 0.528162 7.2:+23972200 MS.gene024237:CDS
AATATGGATGCAAGAAGAGC+TGG 0.531324 7.2:+23972706 MS.gene024237:CDS
ATCAAGCTCTGATGACAAGA+TGG 0.547618 7.2:+23972833 MS.gene024237:CDS
TTTCTGATCCAACTAGGGTA+AGG 0.549945 7.2:+23972884 MS.gene024237:CDS
ATATATTTCAAACTGAGCCA+TGG 0.550284 7.2:+23972318 MS.gene024237:CDS
ACATGACATTTGGAAAAGGT+TGG 0.561346 7.2:-23972286 None:intergenic
CATCCATATTCTCGAACCTA+CGG 0.563017 7.2:-23972693 None:intergenic
GTAGAATTTCTGATCCAACT+AGG 0.564430 7.2:+23972878 MS.gene024237:CDS
GATGCAAGAAGAGCTGGAAA+TGG 0.566075 7.2:+23972712 MS.gene024237:CDS
TCTTTGATCTCAGGAACCGT+AGG 0.573721 7.2:+23972677 MS.gene024237:CDS
GAAGAGCTGGAAATGGTGAA+TGG 0.577138 7.2:+23972719 MS.gene024237:CDS
GGATCAAACCTGAATCCAGC+AGG 0.578674 7.2:-23972215 None:intergenic
TAGAATTTCTGATCCAACTA+GGG 0.584601 7.2:+23972879 MS.gene024237:CDS
GCGAATAGTTCAAAGGAATG+AGG 0.587265 7.2:+23972741 MS.gene024237:CDS
GTGAATGGCGAATAGTTCAA+AGG 0.604587 7.2:+23972734 MS.gene024237:CDS
GCACTCAACAAGTACGCGAT+CGG 0.627245 7.2:-23972240 None:intergenic
AAGCTCTGATGACAAGATGG+TGG 0.668891 7.2:+23972836 MS.gene024237:CDS
TATTTCAAACTGAGCCATGG+AGG 0.675314 7.2:+23972321 MS.gene024237:CDS
GAGCCATGGAGGCTGCCAGG+AGG 0.693460 7.2:+23972332 MS.gene024237:CDS
CATGGCGGTAGCTAATGCTG+AGG 0.695855 7.2:+23972184 None:intergenic
TGGATGCATGAATTTGTCAT+CGG 0.708626 7.2:+23972856 MS.gene024237:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACAAATTGATTTATTCATTT+TGG + chr7.2:23972584-23972603 MS.gene024237:intron 15.0%
!!! CAAATTGATTTATTCATTTT+GGG + chr7.2:23972585-23972604 MS.gene024237:intron 15.0%
!! TCATAAAGAAAGAGAATAAA+GGG - chr7.2:23972401-23972420 None:intergenic 20.0%
!! TTTATTGATAAAACACACAA+TGG - chr7.2:23972424-23972443 None:intergenic 20.0%
!!! CTTATATGATGTTTTTATGT+GGG + chr7.2:23972553-23972572 MS.gene024237:intron 20.0%
! AACATCATATAAGCATTTCA+TGG - chr7.2:23972546-23972565 None:intergenic 25.0%
! GTCATAAAGAAAGAGAATAA+AGG - chr7.2:23972402-23972421 None:intergenic 25.0%
!! ATTTTCTTAGTGTTCTTTGA+TGG + chr7.2:23972450-23972469 MS.gene024237:intron 25.0%
!!! GCTTATATGATGTTTTTATG+TGG + chr7.2:23972552-23972571 MS.gene024237:intron 25.0%
AACAGATATGTTTACTGGAT+AGG + chr7.2:23972802-23972821 MS.gene024237:CDS 30.0%
ACAGATATGTTTACTGGATA+GGG + chr7.2:23972803-23972822 MS.gene024237:CDS 30.0%
ATATATTTCAAACTGAGCCA+TGG + chr7.2:23972318-23972337 MS.gene024237:CDS 30.0%
GAAAGAACAGATATGTTTAC+TGG + chr7.2:23972797-23972816 MS.gene024237:CDS 30.0%
TAGAATTTCTGATCCAACTA+GGG + chr7.2:23972879-23972898 MS.gene024237:CDS 30.0%
TCAAATTCTGACATGACATT+TGG - chr7.2:23972299-23972318 None:intergenic 30.0%
TGCAGAAAATAGATACTCTT+TGG + chr7.2:23972636-23972655 MS.gene024237:intron 30.0%
! AGTACTATTTCTTTGATCTC+AGG + chr7.2:23972668-23972687 MS.gene024237:CDS 30.0%
! ATAGATACTCTTTGGAGAAT+AGG + chr7.2:23972644-23972663 MS.gene024237:CDS 30.0%
ACATGACATTTGGAAAAGGT+TGG - chr7.2:23972289-23972308 None:intergenic 35.0%
ATTGTATTCCTTACCCTAGT+TGG - chr7.2:23972895-23972914 None:intergenic 35.0%
GTAGAATTTCTGATCCAACT+AGG + chr7.2:23972878-23972897 MS.gene024237:CDS 35.0%
TCTGACATGACATTTGGAAA+AGG - chr7.2:23972293-23972312 None:intergenic 35.0%
TGGATGCATGAATTTGTCAT+CGG + chr7.2:23972856-23972875 MS.gene024237:CDS 35.0%
TTGTGTCTTAGACATGCAAT+TGG + chr7.2:23972499-23972518 MS.gene024237:intron 35.0%
! GGTTGTATATTTTCTTCGTC+AGG - chr7.2:23972268-23972287 None:intergenic 35.0%
AATATGGATGCAAGAAGAGC+TGG + chr7.2:23972706-23972725 MS.gene024237:CDS 40.0%
CATCCATATTCTCGAACCTA+CGG - chr7.2:23972696-23972715 None:intergenic 40.0%
GCGAATAGTTCAAAGGAATG+AGG + chr7.2:23972741-23972760 MS.gene024237:CDS 40.0%
GTCTTAGACATGCAATTGGA+GGG + chr7.2:23972503-23972522 MS.gene024237:intron 40.0%
GTGAATGGCGAATAGTTCAA+AGG + chr7.2:23972734-23972753 MS.gene024237:CDS 40.0%
TATTTCAAACTGAGCCATGG+AGG + chr7.2:23972321-23972340 MS.gene024237:CDS 40.0%
TCTTAGACATGCAATTGGAG+GGG + chr7.2:23972504-23972523 MS.gene024237:intron 40.0%
TGTCTTAGACATGCAATTGG+AGG + chr7.2:23972502-23972521 MS.gene024237:intron 40.0%
TTTCTGATCCAACTAGGGTA+AGG + chr7.2:23972884-23972903 MS.gene024237:CDS 40.0%
! ATCAAGCTCTGATGACAAGA+TGG + chr7.2:23972833-23972852 MS.gene024237:CDS 40.0%
! GTTTTCTTTCACAAACCTCC+TGG - chr7.2:23972350-23972369 None:intergenic 40.0%
GAACCGTAGGTTCGAGAATA+TGG + chr7.2:23972690-23972709 MS.gene024237:CDS 45.0%
GAAGAGCTGGAAATGGTGAA+TGG + chr7.2:23972719-23972738 MS.gene024237:CDS 45.0%
GATGCAAGAAGAGCTGGAAA+TGG + chr7.2:23972712-23972731 MS.gene024237:CDS 45.0%
TCTTTGATCTCAGGAACCGT+AGG + chr7.2:23972677-23972696 MS.gene024237:CDS 45.0%
TTGATCTACCTGCTGGATTC+AGG + chr7.2:23972207-23972226 MS.gene024237:CDS 45.0%
! AAGCTCTGATGACAAGATGG+TGG + chr7.2:23972836-23972855 MS.gene024237:CDS 45.0%
GCACTCAACAAGTACGCGAT+CGG - chr7.2:23972243-23972262 None:intergenic 50.0%
GGATCAAACCTGAATCCAGC+AGG - chr7.2:23972218-23972237 None:intergenic 50.0%
TAGACATGCAATTGGAGGGG+AGG + chr7.2:23972507-23972526 MS.gene024237:intron 50.0%
TCAACAAGTACGCGATCGGT+TGG - chr7.2:23972239-23972258 None:intergenic 50.0%
! GCTGAGGTTGATCTACCTGC+TGG + chr7.2:23972200-23972219 MS.gene024237:CDS 55.0%
AAACCTCCTGGCAGCCTCCA+TGG - chr7.2:23972338-23972357 None:intergenic 60.0%
ACTGAGCCATGGAGGCTGCC+AGG + chr7.2:23972329-23972348 MS.gene024237:CDS 65.0%
GAGCCATGGAGGCTGCCAGG+AGG + chr7.2:23972332-23972351 MS.gene024237:CDS 70.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 23972185 23972918 23972185 ID=MS.gene024237
chr7.2 mRNA 23972185 23972918 23972185 ID=MS.gene024237.t1;Parent=MS.gene024237
chr7.2 exon 23972185 23972353 23972185 ID=MS.gene024237.t1.exon1;Parent=MS.gene024237.t1
chr7.2 CDS 23972185 23972353 23972185 ID=cds.MS.gene024237.t1;Parent=MS.gene024237.t1
chr7.2 exon 23972641 23972918 23972641 ID=MS.gene024237.t1.exon2;Parent=MS.gene024237.t1
chr7.2 CDS 23972641 23972918 23972641 ID=cds.MS.gene024237.t1;Parent=MS.gene024237.t1
Gene Sequence

>MS.gene024237

ATGGCGGTAGCTAATGCTGAGGTTGATCTACCTGCTGGATTCAGGTTTGATCCAACCGATCGCGTACTTGTTGAGTGCTACCTGACGAAGAAAATATACAACCAACCTTTTCCAAATGTCATGTCAGAATTTGATATATTTCAAACTGAGCCATGGAGGCTGCCAGGAGGTTTGTGAAAGAAAACAAAAGTTATTTTTCTAATGTTTTTTTAGCCCTTTATTCTCTTTCTTTATGACCATTGTGTGTTTTATCAATAAAAATCAAATTTTCTTAGTGTTCTTTGATGGATTTTCATTGATCTTGAGAATGAACGTTGTGTCTTAGACATGCAATTGGAGGGGAGGAGACTTAAAAATTCCATGAAATGCTTATATGATGTTTTTATGTGGGTAATTAACACAAATTGATTTATTCATTTTGGGTCATTTCAATTTGTTATTTTTTTTTTGTTGCAGAAAATAGATACTCTTTGGAGAATAGGAAGTACTATTTCTTTGATCTCAGGAACCGTAGGTTCGAGAATATGGATGCAAGAAGAGCTGGAAATGGTGAATGGCGAATAGTTCAAAGGAATGAGGAGTTTGCTCATTCAAACAATCAACTGATTGTGAGAAAGAACAGATATGTTTACTGGATAGGGCAAGAAAATCAAGCTCTGATGACAAGATGGTGGATGCATGAATTTGTCATCGGTAGAATTTCTGATCCAACTAGGGTAAGGAATACAATATAG
Protein sequence

>MS.gene024237.t1

MAVANAEVDLPAGFRFDPTDRVLVECYLTKKIYNQPFPNVMSEFDIFQTEPWRLPGENRYSLENRKYYFFDLRNRRFENMDARRAGNGEWRIVQRNEEFAHSNNQLIVRKNRYVYWIGQENQALMTRWWMHEFVIGRISDPTRVRNTI