AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene024550

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene024550.t1 MTR_7g115550 99.051 632 6 0 1 632 1 632 0.0 1278
MS.gene024550.t1 MTR_7g115550 99.051 632 6 0 1 632 1 632 0.0 1265
MS.gene024550.t1 MTR_5g010470 94.380 605 31 2 1 605 1 602 0.0 1068
MS.gene024550.t1 MTR_7g061330 40.594 101 57 3 6 104 61 160 1.87e-14 77.0
MS.gene024550.t1 MTR_7g061330 32.558 129 75 3 8 135 114 231 3.54e-11 66.6
MS.gene024550.t1 MTR_7g461410 40.594 101 57 3 6 104 61 160 1.87e-14 77.0
MS.gene024550.t1 MTR_7g461410 32.558 129 75 3 8 135 114 231 3.54e-11 66.6
MS.gene024550.t1 MTR_7g061330 40.594 101 57 3 6 104 25 124 2.93e-14 76.3
MS.gene024550.t1 MTR_7g061330 32.558 129 75 3 8 135 78 195 5.29e-11 65.9
MS.gene024550.t1 MTR_8g468380 35.789 95 60 1 9 102 24 118 1.74e-13 73.6
MS.gene024550.t1 MTR_5g038910 35.514 107 64 2 9 114 28 130 7.09e-13 71.6
MS.gene024550.t1 MTR_5g038910 35.185 108 65 2 9 115 28 131 8.21e-13 70.9
MS.gene024550.t1 MTR_3g110028 38.202 89 53 2 4 91 83 170 3.17e-12 70.5
MS.gene024550.t1 MTR_3g110028 36.364 99 61 2 8 104 34 132 3.74e-12 70.1
MS.gene024550.t1 MTR_1g026870 35.644 101 63 2 8 106 34 134 3.37e-12 70.5
MS.gene024550.t1 MTR_6g080360 37.500 96 58 2 10 104 482 576 5.83e-12 69.7
MS.gene024550.t1 MTR_6g080360 37.500 96 58 2 10 104 262 356 1.17e-11 68.6
MS.gene024550.t1 MTR_7g451170 38.824 85 51 1 8 91 192 276 1.20e-11 67.4
MS.gene024550.t1 MTR_4g088015 37.647 85 52 1 8 91 222 306 1.72e-11 67.0
MS.gene024550.t1 MTR_6g027370 32.990 97 64 1 8 103 100 196 2.44e-11 66.2
MS.gene024550.t1 MTR_6g074860 32.673 101 67 1 4 103 1 101 2.70e-11 64.7
MS.gene024550.t1 MTR_1g057980 34.375 96 62 1 5 99 78 173 2.81e-11 65.5
MS.gene024550.t1 MTR_7g037260 38.462 78 48 0 8 85 146 223 2.90e-11 65.9
MS.gene024550.t1 MTR_7g035350 36.957 92 57 1 9 99 227 318 2.98e-11 66.6
MS.gene024550.t1 MTR_5g010650 39.759 83 49 1 10 91 113 195 4.63e-11 65.9
MS.gene024550.t1 MTR_0023s0210 35.135 74 47 1 5 77 7 80 4.89e-11 59.7
MS.gene024550.t1 MTR_6g027340 39.474 76 46 0 10 85 19 94 8.43e-11 62.4
MS.gene024550.t1 MTR_5g041570 32.990 97 64 1 8 103 135 231 9.50e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene024550.t1 AT1G09770 82.148 633 108 3 1 630 1 631 0.0 1010
MS.gene024550.t1 AT5G02320 39.252 107 62 3 6 110 75 180 5.36e-14 75.5
MS.gene024550.t1 AT5G02320 36.471 85 53 1 8 91 128 212 7.35e-11 65.5
MS.gene024550.t1 AT5G02320 39.252 107 62 3 6 110 75 180 5.36e-14 75.5
MS.gene024550.t1 AT5G02320 36.471 85 53 1 8 91 128 212 7.35e-11 65.5
MS.gene024550.t1 AT5G11510 38.095 105 63 2 8 110 30 134 5.74e-14 75.9
MS.gene024550.t1 AT5G11510 38.095 105 63 2 8 110 30 134 5.74e-14 75.9
MS.gene024550.t1 AT5G11510 38.095 105 63 2 8 110 30 134 5.74e-14 75.9
MS.gene024550.t1 AT3G18100 36.458 96 60 1 8 102 547 642 6.56e-14 75.9
MS.gene024550.t1 AT5G02320 39.252 107 62 3 6 110 15 120 7.61e-14 74.7
MS.gene024550.t1 AT5G11510 38.095 105 63 2 8 110 30 134 1.03e-13 75.1
MS.gene024550.t1 AT5G11510 38.095 105 63 2 8 110 30 134 1.11e-13 75.1
MS.gene024550.t1 AT3G18100 36.458 96 60 1 8 102 499 594 1.23e-13 74.7
MS.gene024550.t1 AT3G18100 36.458 96 60 1 8 102 386 481 1.25e-13 74.7
MS.gene024550.t1 AT3G18100 36.458 96 60 1 8 102 334 429 1.83e-13 73.9
MS.gene024550.t1 AT4G33450 35.052 97 62 1 8 103 20 116 1.28e-12 68.6
MS.gene024550.t1 AT2G02820 31.933 119 66 2 9 112 32 150 2.80e-12 69.7
MS.gene024550.t1 AT3G09370 38.318 107 63 3 6 110 78 183 3.20e-12 69.7
MS.gene024550.t1 AT3G09370 38.318 107 63 3 6 110 83 188 3.21e-12 69.7
MS.gene024550.t1 AT1G14350 34.375 96 62 1 9 103 27 122 3.26e-12 69.3
MS.gene024550.t1 AT1G14350 34.375 96 62 1 9 103 27 122 3.26e-12 69.3
MS.gene024550.t1 AT2G02820 31.933 119 66 2 9 112 32 150 3.31e-12 69.7
MS.gene024550.t1 AT1G17950 32.353 102 68 1 3 103 1 102 3.43e-12 67.4
MS.gene024550.t1 AT3G27920 33.645 107 69 2 6 110 15 121 4.15e-12 66.6
MS.gene024550.t1 AT3G09370 38.318 107 63 3 6 110 91 196 4.71e-12 69.3
MS.gene024550.t1 AT5G14750 36.264 91 56 2 6 94 17 107 6.19e-12 65.9
MS.gene024550.t1 AT5G40360 37.805 82 51 0 4 85 155 236 6.40e-12 68.2
MS.gene024550.t1 AT2G02820 31.933 119 66 2 9 112 32 150 8.12e-12 67.4
MS.gene024550.t1 AT4G18770 40.000 85 50 1 8 91 218 302 1.60e-11 67.4
MS.gene024550.t1 AT4G32730 34.343 99 63 2 8 104 36 134 1.98e-11 67.8
MS.gene024550.t1 AT4G32730 34.343 99 63 2 8 104 36 134 1.98e-11 67.8
MS.gene024550.t1 AT4G32730 34.343 99 63 2 8 104 36 134 1.98e-11 67.8
MS.gene024550.t1 AT4G32730 34.343 99 63 2 8 104 36 134 1.98e-11 67.8
MS.gene024550.t1 AT5G17800 34.021 97 63 1 8 103 94 190 2.72e-11 65.9
MS.gene024550.t1 AT4G32730 34.343 99 63 2 8 104 36 134 3.44e-11 67.0
MS.gene024550.t1 AT4G00540 38.596 114 59 5 6 109 46 158 4.13e-11 65.9
MS.gene024550.t1 AT1G69560 33.000 100 66 1 5 103 105 204 5.75e-11 64.7
MS.gene024550.t1 AT4G00540 38.596 114 59 5 6 109 44 156 5.90e-11 65.5
MS.gene024550.t1 AT1G69560 33.000 100 66 1 5 103 121 220 6.42e-11 64.7
MS.gene024550.t1 AT5G11050 38.636 88 53 1 5 91 103 190 7.87e-11 65.1
MS.gene024550.t1 AT5G67300 31.092 119 79 2 8 123 7 125 8.73e-11 63.9

Find 193 sgRNAs with CRISPR-Local

Find 211 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATCTCTTTCTAACTGTTTC+TGG 0.008572 7.3:+2044602 None:intergenic
TGCCGGCGTCATACCACTTC+TGG 0.183947 7.3:+2044187 None:intergenic
ATTTCATAACAGCAGCTTTC+AGG 0.225007 7.3:+2045407 None:intergenic
GGAGTAAGGCCTGCACTTCC+AGG 0.240853 7.3:+2044209 None:intergenic
TTGGGTGTCTGTGGATAATT+AGG 0.241982 7.3:+2044449 None:intergenic
CATGATGGAAGCTGAAAATT+TGG 0.248037 7.3:-2044366 MS.gene024550:CDS
TGGCATCTCTGGAGCTTATT+AGG 0.252115 7.3:-2043818 MS.gene024550:CDS
GGTCGCGCAGGCTTTGATTC+AGG 0.281831 7.3:+2045067 None:intergenic
GTTCTCTGAGGAGTTCTTAA+AGG 0.283026 7.3:+2044413 None:intergenic
AAAGCTGCTGTTATGAAATA+TGG 0.287568 7.3:-2045403 MS.gene024550:CDS
GAATTGGTTGCATCACTATC+TGG 0.302904 7.3:+2043988 None:intergenic
TTCTGGGTCATTCAGCTTGT+TGG 0.304170 7.3:+2044619 None:intergenic
CGGGGTCACTCCTAAGAAAA+AGG 0.305366 7.3:-2044273 MS.gene024550:CDS
AAAGGAGCTTCTAGCCTTAC+TGG 0.309592 7.3:-2043715 MS.gene024550:CDS
AGTCCACTCAGTCTTCTTAA+TGG 0.314486 7.3:+2045291 None:intergenic
CCCTGTCATAGAAGATTATC+AGG 0.315605 7.3:-2043604 MS.gene024550:CDS
ATCTCTTTCTAACTGTTTCT+GGG 0.335857 7.3:+2044603 None:intergenic
TAGGCCTCCTCTGGCATCTC+TGG 0.337343 7.3:-2043829 MS.gene024550:CDS
TCTTCAGCATCTTCTTGAAT+TGG 0.338010 7.3:+2043972 None:intergenic
ATCTCGTCGGCTTGCTCAAT+AGG 0.342238 7.3:+2043744 None:intergenic
AGGCCCATTTGCTGCTCGTT+TGG 0.348925 7.3:+2043632 None:intergenic
GAAGGAGTCAGCAGTGGGTT+TGG 0.354854 7.3:+2044239 None:intergenic
CTCCGAAGGGAACTCCTCTC+AGG 0.358383 7.3:-2044139 MS.gene024550:CDS
TCAAGTTCTTCAATAGTAGT+AGG 0.370329 7.3:+2044743 None:intergenic
GCTTGAGGAGATAGCAAATA+AGG 0.373696 7.3:-2043670 MS.gene024550:CDS
CCTTGACACCGCTTGTGTTA+AGG 0.376504 7.3:-2045152 MS.gene024550:CDS
AGAAGAAGAGGCACGGCAGC+AGG 0.379807 7.3:-2043895 MS.gene024550:CDS
AAAGGAGTCTTGGCTTGGTT+GGG 0.383959 7.3:+2044431 None:intergenic
TCTCGTCGGCTTGCTCAATA+GGG 0.387795 7.3:+2043745 None:intergenic
TCAGATTTCCGATCAAGAAT+TGG 0.388348 7.3:-2044558 MS.gene024550:CDS
AGGCTGCTGGGATTGATATA+AGG 0.394781 7.3:-2044886 MS.gene024550:CDS
GCAGGCTTTGATTCAGGATT+CGG 0.400720 7.3:+2045073 None:intergenic
AAAATGAGGATTATGATAAA+GGG 0.404294 7.3:-2045460 MS.gene024550:CDS
TTATGATAAAGGGAGGTGTT+TGG 0.408987 7.3:-2045450 MS.gene024550:CDS
TCTGCAACCCCTGGAAGTGC+AGG 0.411721 7.3:-2044218 MS.gene024550:CDS
GGATCCAAACGAGCAGCAAA+TGG 0.417377 7.3:-2043636 MS.gene024550:CDS
GCTACATATCAATGAAGATA+TGG 0.420115 7.3:-2044111 MS.gene024550:CDS
TAAGGCAGCGGAGGAGGAAA+AGG 0.424744 7.3:-2044868 MS.gene024550:CDS
TTCTTAAAGGAGTCTTGGCT+TGG 0.428361 7.3:+2044426 None:intergenic
GCCGGCGTCATACCACTTCT+GGG 0.428742 7.3:+2044188 None:intergenic
TTGGATGAAATTGCCAAGTT+GGG 0.429250 7.3:-2044539 MS.gene024550:CDS
TGCATCCTTCAGATTTCTCC+GGG 0.432408 7.3:-2044292 MS.gene024550:CDS
GCGACCTGATCCTGTTGATA+TGG 0.436108 7.3:-2045050 MS.gene024550:CDS
AGCTTTCAGGATTTCATCCT+CGG 0.436489 7.3:+2045420 None:intergenic
GTTTGAGAAGAGGCCTCCTC+CGG 0.436599 7.3:-2044816 MS.gene024550:CDS
TCCTCTTCAATCTTCTCCTC+AGG 0.438758 7.3:+2043948 None:intergenic
AAGAACTTGAGGGGAAAAGA+AGG 0.442866 7.3:-2044730 MS.gene024550:CDS
TTGCATCCTTCAGATTTCTC+CGG 0.443045 7.3:-2044293 MS.gene024550:CDS
TAAAGGAGTCTTGGCTTGGT+TGG 0.443688 7.3:+2044430 None:intergenic
ATTGGATGAAATTGCCAAGT+TGG 0.444138 7.3:-2044540 MS.gene024550:CDS
CTCGCTGCCCACAAGGTCAC+TGG 0.444838 7.3:+2044511 None:intergenic
GCCTAGGAAGTTCCCTTTGA+AGG 0.445432 7.3:+2043847 None:intergenic
AGAACCATTGCTCCCATTGT+TGG 0.447103 7.3:-2045214 MS.gene024550:CDS
TCATCCTCATCCATATCAAC+AGG 0.447260 7.3:+2045040 None:intergenic
AGCCAACCGAGCACGTGCTT+CGG 0.447500 7.3:+2045003 None:intergenic
AGAGATGCCAGAGGAGGCCT+AGG 0.450878 7.3:+2043831 None:intergenic
TCCTGATAATCTTCTATGAC+AGG 0.451422 7.3:+2043603 None:intergenic
AAGAGAGAACTGAAGGCTGC+TGG 0.453605 7.3:-2044899 MS.gene024550:CDS
AGGAGTTCTTAAAGGAGTCT+TGG 0.456240 7.3:+2044421 None:intergenic
TGCAGATTTGCGAACGAGTA+GGG 0.456491 7.3:+2045354 None:intergenic
TCATACCACTTCTGGGAGTA+AGG 0.456938 7.3:+2044195 None:intergenic
ATAGCATCTCCTTTACTAGT+TGG 0.464658 7.3:+2044389 None:intergenic
TCTTCTATGACAGGGATAGT+AGG 0.466162 7.3:+2043612 None:intergenic
CAGAAATTCCGTTTGAGAAG+AGG 0.469889 7.3:-2044826 MS.gene024550:CDS
GAGTCTCAGACACCACTGTT+AGG 0.471291 7.3:-2044332 MS.gene024550:CDS
CTGAAAATTTGGCCAGGCTG+AGG 0.471566 7.3:-2044355 MS.gene024550:CDS
TTGATATAAGGCAGCGGAGG+AGG 0.474103 7.3:-2044874 MS.gene024550:CDS
TTCCGAAGCACGTGCTCGGT+TGG 0.478007 7.3:-2045005 MS.gene024550:CDS
TGATGTTGCTGATGAGGATA+GGG 0.479449 7.3:-2044786 MS.gene024550:CDS
AATTTCATCCAATTCTTGAT+CGG 0.479560 7.3:+2044550 None:intergenic
GGAACTTCCTAGGCCTCCTC+TGG 0.482790 7.3:-2043838 MS.gene024550:CDS
TGTCTGAGACTCCCTCAGCC+TGG 0.484905 7.3:+2044343 None:intergenic
TCCTTCAAAGGGAACTTCCT+AGG 0.489332 7.3:-2043848 MS.gene024550:CDS
TGACCCTAGGAAATTGCGTC+CGG 0.489894 7.3:-2045107 MS.gene024550:CDS
TTGGCATGCAGAATAGCAGC+TGG 0.489948 7.3:+2044638 None:intergenic
GAGTAAGGCCTGCACTTCCA+GGG 0.490905 7.3:+2044210 None:intergenic
GCAAATAAGGAGAAGAAGAA+AGG 0.491928 7.3:-2043657 MS.gene024550:CDS
CTCCTTTCTTATCATCTCGT+CGG 0.493278 7.3:+2043731 None:intergenic
TGCTTTCCGAAGCACGTGCT+CGG 0.495069 7.3:-2045009 MS.gene024550:CDS
AATCTGAAGGATGCAACTCC+GGG 0.495306 7.3:+2044300 None:intergenic
ACGAGTAGCACTGCTGCCTT+CGG 0.495690 7.3:+2044481 None:intergenic
GTCTCCGTCAGCTCTTATCA+AGG 0.499862 7.3:+2043791 None:intergenic
AAATCTGAAGGATGCAACTC+CGG 0.500871 7.3:+2044299 None:intergenic
AACGATCAAAAGTCCTTCAA+AGG 0.501321 7.3:-2043860 MS.gene024550:CDS
AGAGGATATGTCTGATAGAA+TGG 0.507303 7.3:-2043931 MS.gene024550:CDS
TCCCTGAGAGGAGTTCCCTT+CGG 0.510495 7.3:+2044137 None:intergenic
TGATAGAATGGCTAGAGAAA+AGG 0.511992 7.3:-2043919 MS.gene024550:CDS
CGAAGGAGTACGACCAACAA+TGG 0.518743 7.3:+2045201 None:intergenic
TGGGTGTCTGTGGATAATTA+GGG 0.519886 7.3:+2044450 None:intergenic
CAGAGAACACCAACTAGTAA+AGG 0.520398 7.3:-2044398 MS.gene024550:CDS
AGAGAGAACTGAAGGCTGCT+GGG 0.523302 7.3:-2044898 MS.gene024550:CDS
TCATCCATATCAACAGGATC+AGG 0.524361 7.3:+2045046 None:intergenic
TTGATGTTGCTGATGAGGAT+AGG 0.524642 7.3:-2044787 MS.gene024550:CDS
TCGGCTTGCTCAATAGGGGT+TGG 0.524733 7.3:+2043750 None:intergenic
TGAAAATTTGGCCAGGCTGA+GGG 0.525084 7.3:-2044354 MS.gene024550:CDS
AGCATTGTCGTGCTCCAGTA+AGG 0.526571 7.3:+2043701 None:intergenic
CTGACTCCTTCTGCAACCCC+TGG 0.529271 7.3:-2044227 MS.gene024550:CDS
GCTTGCTCAATAGGGGTTGG+TGG 0.531592 7.3:+2043753 None:intergenic
CACTCAGTCTTCTTAATGGA+AGG 0.532258 7.3:+2045295 None:intergenic
GGAGGAGGCCTCTTCTCAAA+CGG 0.537221 7.3:+2044818 None:intergenic
TTGGCTTGGTTGGGTGTCTG+TGG 0.541672 7.3:+2044440 None:intergenic
GACCCTAGGAAATTGCGTCC+GGG 0.542095 7.3:-2045106 MS.gene024550:CDS
GATCCAAACGAGCAGCAAAT+GGG 0.542547 7.3:-2043635 MS.gene024550:CDS
CAAGTTCTTCAATAGTAGTA+GGG 0.542935 7.3:+2044744 None:intergenic
TACTACTATTGAAGAACTTG+AGG 0.549669 7.3:-2044741 MS.gene024550:CDS
ACTACTATTGAAGAACTTGA+GGG 0.551426 7.3:-2044740 MS.gene024550:CDS
AGCCGACGAGATGATAAGAA+AGG 0.552168 7.3:-2043733 MS.gene024550:CDS
GAAAAGAAGGATTGATGTTG+AGG 0.552508 7.3:-2044717 MS.gene024550:CDS
CCTTAACACAAGCGGTGTCA+AGG 0.552579 7.3:+2045152 None:intergenic
TGATCGGAAATCTGAGGCGG+TGG 0.554468 7.3:+2044566 None:intergenic
GGTTATGCCAGTGACCTTGT+GGG 0.556103 7.3:-2044518 MS.gene024550:CDS
TGAGAAAGCAAGACGTTGCA+AGG 0.556741 7.3:-2044688 MS.gene024550:CDS
GGGTTATGCCAGTGACCTTG+TGG 0.560009 7.3:-2044519 MS.gene024550:CDS
TTGCAGATTTGCGAACGAGT+AGG 0.561949 7.3:+2045353 None:intergenic
GCACTTCCAGGGGTTGCAGA+AGG 0.564971 7.3:+2044221 None:intergenic
AAGTGGTATGACGCCGGCAA+GGG 0.565169 7.3:-2044183 MS.gene024550:CDS
ACGATCAAAAGTCCTTCAAA+GGG 0.567785 7.3:-2043859 MS.gene024550:CDS
TTACTAGTTGGTGTTCTCTG+AGG 0.567840 7.3:+2044401 None:intergenic
CAAAACAGTGTAAAGCTCGT+TGG 0.569337 7.3:-2045333 MS.gene024550:CDS
GGTATGACGCCGGCAAGGGA+TGG 0.571829 7.3:-2044179 MS.gene024550:CDS
TAAAGGAGATGCTATCATGA+TGG 0.573963 7.3:-2044381 MS.gene024550:CDS
TGAGTTCCTCGCTGCCCACA+AGG 0.576016 7.3:+2044504 None:intergenic
ACCCTAGGAAATTGCGTCCG+GGG 0.576243 7.3:-2045105 MS.gene024550:CDS
GAAGGAGTACGACCAACAAT+GGG 0.576764 7.3:+2045202 None:intergenic
TAGAGAAAAGGCAGAAGAAG+AGG 0.579560 7.3:-2043907 MS.gene024550:CDS
GCATAAAACAAAATTAAAGG+TGG 0.579570 7.3:+2043550 None:intergenic
ATGAACCTGGTGATGACCCT+AGG 0.580871 7.3:-2045120 MS.gene024550:CDS
TCCGAAGGGAACTCCTCTCA+GGG 0.580985 7.3:-2044138 MS.gene024550:CDS
ACATCAAAATAACCCGGAGG+AGG 0.581361 7.3:+2044803 None:intergenic
TTGCAGAAGGAGTCAGCAGT+GGG 0.581838 7.3:+2044234 None:intergenic
TTATTTGCTATCTCCTCAAG+CGG 0.583374 7.3:+2043672 None:intergenic
GTCACTGGCATAACCCAACT+TGG 0.585958 7.3:+2044526 None:intergenic
AGTAAGGCCTGCACTTCCAG+GGG 0.586407 7.3:+2044211 None:intergenic
TGATATGGATGAGGATGAGA+AGG 0.587713 7.3:-2045035 MS.gene024550:CDS
AACTCCTTGATAAGAGCTGA+CGG 0.589304 7.3:-2043795 MS.gene024550:CDS
CCTGATAATCTTCTATGACA+GGG 0.589597 7.3:+2043604 None:intergenic
CATAAAACAAAATTAAAGGT+GGG 0.589975 7.3:+2043551 None:intergenic
GTAAAGCTCGTTGGTATGAG+TGG 0.590546 7.3:-2045324 MS.gene024550:CDS
ATAGTGCTAAGCTCGAGCTA+CGG 0.590781 7.3:-2044079 MS.gene024550:CDS
GACTGAGTGGACTCGAGAAG+AGG 0.592125 7.3:-2045281 MS.gene024550:CDS
TTTGAGAAGAGGCCTCCTCC+GGG 0.592447 7.3:-2044815 MS.gene024550:CDS
TGGCATGCAGAATAGCAGCT+GGG 0.592750 7.3:+2044639 None:intergenic
GAAGTGGTATGACGCCGGCA+AGG 0.595106 7.3:-2044184 MS.gene024550:CDS
TGCTGATGAGGATAGGGAGG+TGG 0.595277 7.3:-2044780 MS.gene024550:CDS
AGCTCCAGAGATGCCAGAGG+AGG 0.595601 7.3:+2043825 None:intergenic
AAAAGGCAGAAGAAGAGGCA+CGG 0.599691 7.3:-2043902 MS.gene024550:CDS
GCAATGGTTCTCCACTGAGT+AGG 0.605858 7.3:+2045226 None:intergenic
TCAACAGGATCAGGTCGCGC+AGG 0.606256 7.3:+2045055 None:intergenic
TGGAAGCTGAAAATTTGGCC+AGG 0.607474 7.3:-2044361 MS.gene024550:CDS
TCTCAGACACCACTGTTAGG+AGG 0.609284 7.3:-2044329 MS.gene024550:CDS
GCTCGGTTGGCTAACACGAA+AGG 0.609461 7.3:-2044992 MS.gene024550:CDS
AGCGGAGGAGGAAAAGGAGA+GGG 0.609580 7.3:-2044862 MS.gene024550:CDS
AGAAACAGCTTGAGGAAGCG+AGG 0.613924 7.3:-2044943 MS.gene024550:CDS
GTTGCAGAAGGAGTCAGCAG+TGG 0.614178 7.3:+2044233 None:intergenic
ATGAGGATTATGATAAAGGG+AGG 0.615783 7.3:-2045457 MS.gene024550:CDS
GTGACCCCGGAGAAATCTGA+AGG 0.618504 7.3:+2044287 None:intergenic
CCCTAGGAAATTGCGTCCGG+GGG 0.618511 7.3:-2045104 MS.gene024550:CDS
TGATCCTGTTGATATGGATG+AGG 0.618540 7.3:-2045044 MS.gene024550:CDS
CAATGCTAAGTATCCGCTTG+AGG 0.619069 7.3:-2043685 MS.gene024550:CDS
AATTTCCTAGGGTCATCACC+AGG 0.619740 7.3:+2045115 None:intergenic
CAGCGGAGGAGGAAAAGGAG+AGG 0.619802 7.3:-2044863 MS.gene024550:CDS
CTGGGATTGATATAAGGCAG+CGG 0.621106 7.3:-2044880 MS.gene024550:CDS
GCAGGCCTTACTCCCAGAAG+TGG 0.624004 7.3:-2044200 MS.gene024550:CDS
ACGACCAACAATGGGAGCAA+TGG 0.628407 7.3:+2045210 None:intergenic
AGAAGATGCTGAAGAGCCTG+AGG 0.629986 7.3:-2043964 MS.gene024550:CDS
GGATTCGGATCAATCTCCCC+CGG 0.632404 7.3:+2045088 None:intergenic
CTCGTCGGCTTGCTCAATAG+GGG 0.633774 7.3:+2043746 None:intergenic
AACAGCTTGAGGAAGCGAGG+AGG 0.635219 7.3:-2044940 MS.gene024550:CDS
GTTATCATCCTTAACACAAG+CGG 0.635250 7.3:+2045144 None:intergenic
GGCATGCAGAATAGCAGCTG+GGG 0.637586 7.3:+2044640 None:intergenic
GCCTGAGGAGAAGATTGAAG+AGG 0.638365 7.3:-2043949 MS.gene024550:CDS
GGCAGCGAGGAACTCACCGA+AGG 0.640181 7.3:-2044497 MS.gene024550:CDS
TCCCAGAAGTGGTATGACGC+CGG 0.645263 7.3:-2044189 MS.gene024550:CDS
TGTTGCTGATGAGGATAGGG+AGG 0.645550 7.3:-2044783 MS.gene024550:CDS
CTACTATTGAAGAACTTGAG+GGG 0.649822 7.3:-2044739 MS.gene024550:CDS
TCAATAGTAGTAGGGAACGC+AGG 0.663373 7.3:+2044752 None:intergenic
AGCTAGGGAGAAACAGCTTG+AGG 0.665565 7.3:-2044951 MS.gene024550:CDS
AATTCTTGATCGGAAATCTG+AGG 0.665716 7.3:+2044560 None:intergenic
AAGGATGATAACTATGAACC+TGG 0.668836 7.3:-2045133 MS.gene024550:CDS
TAGCGTTCAAGACACTGCGA+AGG 0.670461 7.3:+2045184 None:intergenic
TCAGCAACATCAAAATAACC+CGG 0.679101 7.3:+2044797 None:intergenic
CTTCCATTAAGAAGACTGAG+TGG 0.680364 7.3:-2045294 MS.gene024550:CDS
CAGTGACCTTGTGGGCAGCG+AGG 0.681072 7.3:-2044510 MS.gene024550:CDS
ACTGTTAGGAGGAGAAAACC+CGG 0.686147 7.3:-2044318 MS.gene024550:CDS
ATATGTAGCTCATCCCTGAG+AGG 0.688581 7.3:+2044125 None:intergenic
CTAAGCTTATGCCTACTCAG+TGG 0.690760 7.3:-2045237 MS.gene024550:CDS
TCTTGATCGGAAATCTGAGG+CGG 0.695426 7.3:+2044563 None:intergenic
GGATTGATATAAGGCAGCGG+AGG 0.699913 7.3:-2044877 MS.gene024550:CDS
ATAAGCTCCAGAGATGCCAG+AGG 0.701530 7.3:+2043822 None:intergenic
TGTCATAGAAGATTATCAGG+AGG 0.727087 7.3:-2043601 MS.gene024550:CDS
CAAGGAATAAAATTGCAGAG+AGG 0.745082 7.3:-2044670 MS.gene024550:CDS
GCATCCTTCAGATTTCTCCG+GGG 0.756401 7.3:-2044291 MS.gene024550:CDS
GCAACATCAAAATAACCCGG+AGG 0.761555 7.3:+2044800 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AATTTCATCCAATTCTTGAT+CGG + chr7.3:2044473-2044492 None:intergenic 25.0%
! GAAATATGGTAAAAATCAGT+GGG - chr7.3:2043631-2043650 MS.gene024550:CDS 25.0%
! TGAAATATGGTAAAAATCAG+TGG - chr7.3:2043630-2043649 MS.gene024550:CDS 25.0%
AAAAAGCAAAAAGGAAAGCT+AGG - chr7.3:2044053-2044072 MS.gene024550:CDS 30.0%
AAAAGCAAAAAGGAAAGCTA+GGG - chr7.3:2044054-2044073 MS.gene024550:CDS 30.0%
AAAGCTGCTGTTATGAAATA+TGG - chr7.3:2043617-2043636 MS.gene024550:CDS 30.0%
ACTACTATTGAAGAACTTGA+GGG - chr7.3:2044280-2044299 MS.gene024550:CDS 30.0%
CAAGTTCTTCAATAGTAGTA+GGG + chr7.3:2044279-2044298 None:intergenic 30.0%
CGAAAGGTAAAAAAGCAAAA+AGG - chr7.3:2044044-2044063 MS.gene024550:CDS 30.0%
GCTACATATCAATGAAGATA+TGG - chr7.3:2044909-2044928 MS.gene024550:CDS 30.0%
TACTACTATTGAAGAACTTG+AGG - chr7.3:2044279-2044298 MS.gene024550:CDS 30.0%
TCAAGTTCTTCAATAGTAGT+AGG + chr7.3:2044280-2044299 None:intergenic 30.0%
! ATCTCTTTCTAACTGTTTCT+GGG + chr7.3:2044420-2044439 None:intergenic 30.0%
! GTGTGAATTTCCTTTTTCTT+AGG + chr7.3:2044760-2044779 None:intergenic 30.0%
!! ACTATCTGGTACTCATTTTT+AGG + chr7.3:2045021-2045040 None:intergenic 30.0%
!!! TTATTTTGATGTTGCTGATG+AGG - chr7.3:2044228-2044247 MS.gene024550:CDS 30.0%
AACGATCAAAAGTCCTTCAA+AGG - chr7.3:2045160-2045179 MS.gene024550:CDS 35.0%
AAGGATGATAACTATGAACC+TGG - chr7.3:2043887-2043906 MS.gene024550:CDS 35.0%
AATTCTTGATCGGAAATCTG+AGG + chr7.3:2044463-2044482 None:intergenic 35.0%
ACAGAAAAAGAGAGAACTGA+AGG - chr7.3:2044114-2044133 MS.gene024550:CDS 35.0%
ACGATCAAAAGTCCTTCAAA+GGG - chr7.3:2045161-2045180 MS.gene024550:CDS 35.0%
AGAGGATATGTCTGATAGAA+TGG - chr7.3:2045089-2045108 MS.gene024550:CDS 35.0%
ATAGCATCTCCTTTACTAGT+TGG + chr7.3:2044634-2044653 None:intergenic 35.0%
ATGAGGATTATGATAAAGGG+AGG - chr7.3:2043563-2043582 MS.gene024550:CDS 35.0%
ATTGGATGAAATTGCCAAGT+TGG - chr7.3:2044480-2044499 MS.gene024550:CDS 35.0%
ATTTCATAACAGCAGCTTTC+AGG + chr7.3:2043616-2043635 None:intergenic 35.0%
CAAGGAATAAAATTGCAGAG+AGG - chr7.3:2044350-2044369 MS.gene024550:CDS 35.0%
CCTGATAATCTTCTATGACA+GGG + chr7.3:2045419-2045438 None:intergenic 35.0%
CTACTATTGAAGAACTTGAG+GGG - chr7.3:2044281-2044300 MS.gene024550:CDS 35.0%
GAAAAGAAGGATTGATGTTG+AGG - chr7.3:2044303-2044322 MS.gene024550:CDS 35.0%
GATCTCTTTCTAACTGTTTC+TGG + chr7.3:2044421-2044440 None:intergenic 35.0%
GCAAATAAGGAGAAGAAGAA+AGG - chr7.3:2045363-2045382 MS.gene024550:CDS 35.0%
GTTATCATCCTTAACACAAG+CGG + chr7.3:2043879-2043898 None:intergenic 35.0%
TAAAGGAGATGCTATCATGA+TGG - chr7.3:2044639-2044658 MS.gene024550:CDS 35.0%
TCAGATTTCCGATCAAGAAT+TGG - chr7.3:2044462-2044481 MS.gene024550:CDS 35.0%
TCAGCAACATCAAAATAACC+CGG + chr7.3:2044226-2044245 None:intergenic 35.0%
TCCTGATAATCTTCTATGAC+AGG + chr7.3:2045420-2045439 None:intergenic 35.0%
TCTTCAGCATCTTCTTGAAT+TGG + chr7.3:2045051-2045070 None:intergenic 35.0%
TGATAGAATGGCTAGAGAAA+AGG - chr7.3:2045101-2045120 MS.gene024550:CDS 35.0%
TGTCATAGAAGATTATCAGG+AGG - chr7.3:2045419-2045438 MS.gene024550:CDS 35.0%
TTGGATGAAATTGCCAAGTT+GGG - chr7.3:2044481-2044500 MS.gene024550:CDS 35.0%
! CATGATGGAAGCTGAAAATT+TGG - chr7.3:2044654-2044673 MS.gene024550:CDS 35.0%
!! TTATGATAAAGGGAGGTGTT+TGG - chr7.3:2043570-2043589 MS.gene024550:CDS 35.0%
!! TTATTTGCTATCTCCTCAAG+CGG + chr7.3:2045351-2045370 None:intergenic 35.0%
AAAGAAAAACCATCCCTTGC+CGG + chr7.3:2044853-2044872 None:intergenic 40.0%
AAATCTGAAGGATGCAACTC+CGG + chr7.3:2044724-2044743 None:intergenic 40.0%
AACTCCTTGATAAGAGCTGA+CGG - chr7.3:2045225-2045244 MS.gene024550:CDS 40.0%
AAGAACTTGAGGGGAAAAGA+AGG - chr7.3:2044290-2044309 MS.gene024550:CDS 40.0%
AGCTTTCAGGATTTCATCCT+CGG + chr7.3:2043603-2043622 None:intergenic 40.0%
AGGAGTTCTTAAAGGAGTCT+TGG + chr7.3:2044602-2044621 None:intergenic 40.0%
AGTCCACTCAGTCTTCTTAA+TGG + chr7.3:2043732-2043751 None:intergenic 40.0%
ATGAAAAAAAGTCTGCGCTC+TGG - chr7.3:2044976-2044995 MS.gene024550:CDS 40.0%
CAAAACAGTGTAAAGCTCGT+TGG - chr7.3:2043687-2043706 MS.gene024550:CDS 40.0%
CACTCAGTCTTCTTAATGGA+AGG + chr7.3:2043728-2043747 None:intergenic 40.0%
CAGAAATTCCGTTTGAGAAG+AGG - chr7.3:2044194-2044213 MS.gene024550:CDS 40.0%
CAGAGAACACCAACTAGTAA+AGG - chr7.3:2044622-2044641 MS.gene024550:CDS 40.0%
CCCTGTCATAGAAGATTATC+AGG - chr7.3:2045416-2045435 MS.gene024550:CDS 40.0%
CTCCTTTCTTATCATCTCGT+CGG + chr7.3:2045292-2045311 None:intergenic 40.0%
CTTCCATTAAGAAGACTGAG+TGG - chr7.3:2043726-2043745 MS.gene024550:CDS 40.0%
GAATTGGTTGCATCACTATC+TGG + chr7.3:2045035-2045054 None:intergenic 40.0%
GCTTGAGGAGATAGCAAATA+AGG - chr7.3:2045350-2045369 MS.gene024550:CDS 40.0%
TAGAGAAAAGGCAGAAGAAG+AGG - chr7.3:2045113-2045132 MS.gene024550:CDS 40.0%
TCATCCATATCAACAGGATC+AGG + chr7.3:2043977-2043996 None:intergenic 40.0%
TCATCCTCATCCATATCAAC+AGG + chr7.3:2043983-2044002 None:intergenic 40.0%
TCTTCTATGACAGGGATAGT+AGG + chr7.3:2045411-2045430 None:intergenic 40.0%
TGATATGGATGAGGATGAGA+AGG - chr7.3:2043985-2044004 MS.gene024550:CDS 40.0%
TGATCCTGTTGATATGGATG+AGG - chr7.3:2043976-2043995 MS.gene024550:CDS 40.0%
TGATGTTGCTGATGAGGATA+GGG - chr7.3:2044234-2044253 MS.gene024550:CDS 40.0%
TGGGTGTCTGTGGATAATTA+GGG + chr7.3:2044573-2044592 None:intergenic 40.0%
TTCTTAAAGGAGTCTTGGCT+TGG + chr7.3:2044597-2044616 None:intergenic 40.0%
TTGATGTTGCTGATGAGGAT+AGG - chr7.3:2044233-2044252 MS.gene024550:CDS 40.0%
TTGCATCCTTCAGATTTCTC+CGG - chr7.3:2044727-2044746 MS.gene024550:CDS 40.0%
TTGGGTGTCTGTGGATAATT+AGG + chr7.3:2044574-2044593 None:intergenic 40.0%
! GCAAGGGATGGTTTTTCTTT+TGG - chr7.3:2044853-2044872 MS.gene024550:CDS 40.0%
! GTTCTCTGAGGAGTTCTTAA+AGG + chr7.3:2044610-2044629 None:intergenic 40.0%
! TTACTAGTTGGTGTTCTCTG+AGG + chr7.3:2044622-2044641 None:intergenic 40.0%
!! ACTCATTTTTAGGCTGTGGA+AGG + chr7.3:2045011-2045030 None:intergenic 40.0%
!! TGGTACTCATTTTTAGGCTG+TGG + chr7.3:2045015-2045034 None:intergenic 40.0%
AAAAGGCAGAAGAAGAGGCA+CGG - chr7.3:2045118-2045137 MS.gene024550:CDS 45.0%
AATCTGAAGGATGCAACTCC+GGG + chr7.3:2044723-2044742 None:intergenic 45.0%
AATTTCCTAGGGTCATCACC+AGG + chr7.3:2043908-2043927 None:intergenic 45.0%
ACATCAAAATAACCCGGAGG+AGG + chr7.3:2044220-2044239 None:intergenic 45.0%
ACTGTTAGGAGGAGAAAACC+CGG - chr7.3:2044702-2044721 MS.gene024550:CDS 45.0%
AGAACCATTGCTCCCATTGT+TGG - chr7.3:2043806-2043825 MS.gene024550:CDS 45.0%
AGCCGACGAGATGATAAGAA+AGG - chr7.3:2045287-2045306 MS.gene024550:CDS 45.0%
AGGCTGCTGGGATTGATATA+AGG - chr7.3:2044134-2044153 MS.gene024550:CDS 45.0%
AGGTGTTTGGAAAAACACCG+AGG - chr7.3:2043583-2043602 MS.gene024550:CDS 45.0%
ATAGTGCTAAGCTCGAGCTA+CGG - chr7.3:2044941-2044960 MS.gene024550:CDS 45.0%
ATATGTAGCTCATCCCTGAG+AGG + chr7.3:2044898-2044917 None:intergenic 45.0%
CAATGCTAAGTATCCGCTTG+AGG - chr7.3:2045335-2045354 MS.gene024550:CDS 45.0%
CTAAGCTTATGCCTACTCAG+TGG - chr7.3:2043783-2043802 MS.gene024550:CDS 45.0%
CTGGGATTGATATAAGGCAG+CGG - chr7.3:2044140-2044159 MS.gene024550:CDS 45.0%
GATCCAAACGAGCAGCAAAT+GGG - chr7.3:2045385-2045404 MS.gene024550:CDS 45.0%
GCAACATCAAAATAACCCGG+AGG + chr7.3:2044223-2044242 None:intergenic 45.0%
GTAAAGCTCGTTGGTATGAG+TGG - chr7.3:2043696-2043715 MS.gene024550:CDS 45.0%
TCAATAGTAGTAGGGAACGC+AGG + chr7.3:2044271-2044290 None:intergenic 45.0%
TCCTCTTCAATCTTCTCCTC+AGG + chr7.3:2045075-2045094 None:intergenic 45.0%
TCCTTCAAAGGGAACTTCCT+AGG - chr7.3:2045172-2045191 MS.gene024550:CDS 45.0%
TCTTGATCGGAAATCTGAGG+CGG + chr7.3:2044460-2044479 None:intergenic 45.0%
TGAAAATTTGGCCAGGCTGA+GGG - chr7.3:2044666-2044685 MS.gene024550:CDS 45.0%
TGAGAAAGCAAGACGTTGCA+AGG - chr7.3:2044332-2044351 MS.gene024550:CDS 45.0%
TGCAGATTTGCGAACGAGTA+GGG + chr7.3:2043669-2043688 None:intergenic 45.0%
TGCATCCTTCAGATTTCTCC+GGG - chr7.3:2044728-2044747 MS.gene024550:CDS 45.0%
TGGAAGCTGAAAATTTGGCC+AGG - chr7.3:2044659-2044678 MS.gene024550:CDS 45.0%
TTCTGGGTCATTCAGCTTGT+TGG + chr7.3:2044404-2044423 None:intergenic 45.0%
TTGCAGATTTGCGAACGAGT+AGG + chr7.3:2043670-2043689 None:intergenic 45.0%
! CTTTTTCTTAGGAGTGACCC+CGG + chr7.3:2044749-2044768 None:intergenic 45.0%
! GAAGGAGTACGACCAACAAT+GGG + chr7.3:2043821-2043840 None:intergenic 45.0%
! GCAGGCTTTGATTCAGGATT+CGG + chr7.3:2043950-2043969 None:intergenic 45.0%
! TCATACCACTTCTGGGAGTA+AGG + chr7.3:2044828-2044847 None:intergenic 45.0%
! TCTTTTGGCATGACTCCGAA+GGG - chr7.3:2044868-2044887 MS.gene024550:CDS 45.0%
! TTCTTTTGGCATGACTCCGA+AGG - chr7.3:2044867-2044886 MS.gene024550:CDS 45.0%
!! AAAGGAGCTTCTAGCCTTAC+TGG - chr7.3:2045305-2045324 MS.gene024550:CDS 45.0%
!! AAAGGAGTCTTGGCTTGGTT+GGG + chr7.3:2044592-2044611 None:intergenic 45.0%
!! TAAAGGAGTCTTGGCTTGGT+TGG + chr7.3:2044593-2044612 None:intergenic 45.0%
!! TGGCATCTCTGGAGCTTATT+AGG - chr7.3:2045202-2045221 MS.gene024550:CDS 45.0%
AAGAGAGAACTGAAGGCTGC+TGG - chr7.3:2044121-2044140 MS.gene024550:CDS 50.0%
ACGACCAACAATGGGAGCAA+TGG + chr7.3:2043813-2043832 None:intergenic 50.0%
AGAAACAGCTTGAGGAAGCG+AGG - chr7.3:2044077-2044096 MS.gene024550:CDS 50.0%
AGAAGATGCTGAAGAGCCTG+AGG - chr7.3:2045056-2045075 MS.gene024550:CDS 50.0%
AGAGAGAACTGAAGGCTGCT+GGG - chr7.3:2044122-2044141 MS.gene024550:CDS 50.0%
AGCATTGTCGTGCTCCAGTA+AGG + chr7.3:2045322-2045341 None:intergenic 50.0%
AGCTAGGGAGAAACAGCTTG+AGG - chr7.3:2044069-2044088 MS.gene024550:CDS 50.0%
ATAAGCTCCAGAGATGCCAG+AGG + chr7.3:2045201-2045220 None:intergenic 50.0%
CCTTGACACCGCTTGTGTTA+AGG - chr7.3:2043868-2043887 MS.gene024550:CDS 50.0%
CGGGGTCACTCCTAAGAAAA+AGG - chr7.3:2044747-2044766 MS.gene024550:CDS 50.0%
CTGAAAATTTGGCCAGGCTG+AGG - chr7.3:2044665-2044684 MS.gene024550:CDS 50.0%
GAGTCTCAGACACCACTGTT+AGG - chr7.3:2044688-2044707 MS.gene024550:CDS 50.0%
GCAATGGTTCTCCACTGAGT+AGG + chr7.3:2043797-2043816 None:intergenic 50.0%
GCATCCTTCAGATTTCTCCG+GGG - chr7.3:2044729-2044748 MS.gene024550:CDS 50.0%
GCCTAGGAAGTTCCCTTTGA+AGG + chr7.3:2045176-2045195 None:intergenic 50.0%
GCCTGAGGAGAAGATTGAAG+AGG - chr7.3:2045071-2045090 MS.gene024550:CDS 50.0%
GCGACCTGATCCTGTTGATA+TGG - chr7.3:2043970-2043989 MS.gene024550:CDS 50.0%
GGATCCAAACGAGCAGCAAA+TGG - chr7.3:2045384-2045403 MS.gene024550:CDS 50.0%
GGATTGATATAAGGCAGCGG+AGG - chr7.3:2044143-2044162 MS.gene024550:CDS 50.0%
GGTTATGCCAGTGACCTTGT+GGG - chr7.3:2044502-2044521 MS.gene024550:CDS 50.0%
GTCACTGGCATAACCCAACT+TGG + chr7.3:2044497-2044516 None:intergenic 50.0%
GTCTCCGTCAGCTCTTATCA+AGG + chr7.3:2045232-2045251 None:intergenic 50.0%
TAGCGTTCAAGACACTGCGA+AGG + chr7.3:2043839-2043858 None:intergenic 50.0%
TCTCAGACACCACTGTTAGG+AGG - chr7.3:2044691-2044710 MS.gene024550:CDS 50.0%
TGACCCTAGGAAATTGCGTC+CGG - chr7.3:2043913-2043932 MS.gene024550:CDS 50.0%
TGGCATGCAGAATAGCAGCT+GGG + chr7.3:2044384-2044403 None:intergenic 50.0%
TGTTGCTGATGAGGATAGGG+AGG - chr7.3:2044237-2044256 MS.gene024550:CDS 50.0%
TTGATATAAGGCAGCGGAGG+AGG - chr7.3:2044146-2044165 MS.gene024550:CDS 50.0%
TTGCAGAAGGAGTCAGCAGT+GGG + chr7.3:2044789-2044808 None:intergenic 50.0%
TTGGCATGCAGAATAGCAGC+TGG + chr7.3:2044385-2044404 None:intergenic 50.0%
! ATGAACCTGGTGATGACCCT+AGG - chr7.3:2043900-2043919 MS.gene024550:CDS 50.0%
! CCTTAACACAAGCGGTGTCA+AGG + chr7.3:2043871-2043890 None:intergenic 50.0%
! CGAAGGAGTACGACCAACAA+TGG + chr7.3:2043822-2043841 None:intergenic 50.0%
! GGGTTTTCTCCTCCTAACAG+TGG + chr7.3:2044703-2044722 None:intergenic 50.0%
!! ATCTCGTCGGCTTGCTCAAT+AGG + chr7.3:2045279-2045298 None:intergenic 50.0%
!! TCTCGTCGGCTTGCTCAATA+GGG + chr7.3:2045278-2045297 None:intergenic 50.0%
AACAGCTTGAGGAAGCGAGG+AGG - chr7.3:2044080-2044099 MS.gene024550:CDS 55.0%
AAGTGGTATGACGCCGGCAA+GGG - chr7.3:2044837-2044856 MS.gene024550:CDS 55.0%
ACCCTAGGAAATTGCGTCCG+GGG - chr7.3:2043915-2043934 MS.gene024550:CDS 55.0%
ACGAGTAGCACTGCTGCCTT+CGG + chr7.3:2044542-2044561 None:intergenic 55.0%
AGCGGAGGAGGAAAAGGAGA+GGG - chr7.3:2044158-2044177 MS.gene024550:CDS 55.0%
AGTAAGGCCTGCACTTCCAG+GGG + chr7.3:2044812-2044831 None:intergenic 55.0%
GACCCTAGGAAATTGCGTCC+GGG - chr7.3:2043914-2043933 MS.gene024550:CDS 55.0%
GAGTAAGGCCTGCACTTCCA+GGG + chr7.3:2044813-2044832 None:intergenic 55.0%
GCTTGCTCAATAGGGGTTGG+TGG + chr7.3:2045270-2045289 None:intergenic 55.0%
GGAGGAGGCCTCTTCTCAAA+CGG + chr7.3:2044205-2044224 None:intergenic 55.0%
GGATTCGGATCAATCTCCCC+CGG + chr7.3:2043935-2043954 None:intergenic 55.0%
GGCATGCAGAATAGCAGCTG+GGG + chr7.3:2044383-2044402 None:intergenic 55.0%
GGGTTATGCCAGTGACCTTG+TGG - chr7.3:2044501-2044520 MS.gene024550:CDS 55.0%
GTGACCCCGGAGAAATCTGA+AGG + chr7.3:2044736-2044755 None:intergenic 55.0%
GTTGCAGAAGGAGTCAGCAG+TGG + chr7.3:2044790-2044809 None:intergenic 55.0%
GTTTGAGAAGAGGCCTCCTC+CGG - chr7.3:2044204-2044223 MS.gene024550:CDS 55.0%
TAAGGCAGCGGAGGAGGAAA+AGG - chr7.3:2044152-2044171 MS.gene024550:CDS 55.0%
TCCCAGAAGTGGTATGACGC+CGG - chr7.3:2044831-2044850 MS.gene024550:CDS 55.0%
TCCCTGAGAGGAGTTCCCTT+CGG + chr7.3:2044886-2044905 None:intergenic 55.0%
TCCGAAGGGAACTCCTCTCA+GGG - chr7.3:2044882-2044901 MS.gene024550:CDS 55.0%
TGCTGATGAGGATAGGGAGG+TGG - chr7.3:2044240-2044259 MS.gene024550:CDS 55.0%
TGCTTTCCGAAGCACGTGCT+CGG - chr7.3:2044011-2044030 MS.gene024550:CDS 55.0%
TTTGAGAAGAGGCCTCCTCC+GGG - chr7.3:2044205-2044224 MS.gene024550:CDS 55.0%
! AGGCCCATTTGCTGCTCGTT+TGG + chr7.3:2045391-2045410 None:intergenic 55.0%
! GAAGGAGTCAGCAGTGGGTT+TGG + chr7.3:2044784-2044803 None:intergenic 55.0%
! GACTGAGTGGACTCGAGAAG+AGG - chr7.3:2043739-2043758 MS.gene024550:CDS 55.0%
! GCTCGGTTGGCTAACACGAA+AGG - chr7.3:2044028-2044047 MS.gene024550:CDS 55.0%
! TCGGCTTGCTCAATAGGGGT+TGG + chr7.3:2045273-2045292 None:intergenic 55.0%
! TGATCGGAAATCTGAGGCGG+TGG + chr7.3:2044457-2044476 None:intergenic 55.0%
!! CTCGTCGGCTTGCTCAATAG+GGG + chr7.3:2045277-2045296 None:intergenic 55.0%
!! TTGGCTTGGTTGGGTGTCTG+TGG + chr7.3:2044583-2044602 None:intergenic 55.0%
AGAGATGCCAGAGGAGGCCT+AGG + chr7.3:2045192-2045211 None:intergenic 60.0%
AGCCAACCGAGCACGTGCTT+CGG + chr7.3:2044020-2044039 None:intergenic 60.0%
AGCTCCAGAGATGCCAGAGG+AGG + chr7.3:2045198-2045217 None:intergenic 60.0%
CAGCGGAGGAGGAAAAGGAG+AGG - chr7.3:2044157-2044176 MS.gene024550:CDS 60.0%
CCCCCGGACGCAATTTCCTA+GGG + chr7.3:2043919-2043938 None:intergenic 60.0%
CCCTAGGAAATTGCGTCCGG+GGG - chr7.3:2043916-2043935 MS.gene024550:CDS 60.0%
CTCCGAAGGGAACTCCTCTC+AGG - chr7.3:2044881-2044900 MS.gene024550:CDS 60.0%
CTGACTCCTTCTGCAACCCC+TGG - chr7.3:2044793-2044812 MS.gene024550:CDS 60.0%
GAAGTGGTATGACGCCGGCA+AGG - chr7.3:2044836-2044855 MS.gene024550:CDS 60.0%
GCACTTCCAGGGGTTGCAGA+AGG + chr7.3:2044802-2044821 None:intergenic 60.0%
GCAGGCCTTACTCCCAGAAG+TGG - chr7.3:2044820-2044839 MS.gene024550:CDS 60.0%
GCCGGCGTCATACCACTTCT+GGG + chr7.3:2044835-2044854 None:intergenic 60.0%
GGAACTTCCTAGGCCTCCTC+TGG - chr7.3:2045182-2045201 MS.gene024550:CDS 60.0%
GGAGTAAGGCCTGCACTTCC+AGG + chr7.3:2044814-2044833 None:intergenic 60.0%
TAGGCCTCCTCTGGCATCTC+TGG - chr7.3:2045191-2045210 MS.gene024550:CDS 60.0%
TCAACAGGATCAGGTCGCGC+AGG + chr7.3:2043968-2043987 None:intergenic 60.0%
TCCCCCGGACGCAATTTCCT+AGG + chr7.3:2043920-2043939 None:intergenic 60.0%
TGAGTTCCTCGCTGCCCACA+AGG + chr7.3:2044519-2044538 None:intergenic 60.0%
TGCCGGCGTCATACCACTTC+TGG + chr7.3:2044836-2044855 None:intergenic 60.0%
TTCCGAAGCACGTGCTCGGT+TGG - chr7.3:2044015-2044034 MS.gene024550:CDS 60.0%
! AGAAGAAGAGGCACGGCAGC+AGG - chr7.3:2045125-2045144 MS.gene024550:CDS 60.0%
! GGTCGCGCAGGCTTTGATTC+AGG + chr7.3:2043956-2043975 None:intergenic 60.0%
! TCTGCAACCCCTGGAAGTGC+AGG - chr7.3:2044802-2044821 MS.gene024550:CDS 60.0%
! TGTCTGAGACTCCCTCAGCC+TGG + chr7.3:2044680-2044699 None:intergenic 60.0%
CAGTGACCTTGTGGGCAGCG+AGG - chr7.3:2044510-2044529 MS.gene024550:CDS 65.0%
CTCGCTGCCCACAAGGTCAC+TGG + chr7.3:2044512-2044531 None:intergenic 65.0%
GGCAGCGAGGAACTCACCGA+AGG - chr7.3:2044523-2044542 MS.gene024550:CDS 65.0%
GGTATGACGCCGGCAAGGGA+TGG - chr7.3:2044841-2044860 MS.gene024550:CDS 65.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 2043563 2045479 2043563 ID=MS.gene024550
chr7.3 mRNA 2043563 2045479 2043563 ID=MS.gene024550.t1;Parent=MS.gene024550
chr7.3 exon 2043563 2045479 2043563 ID=MS.gene024550.t1.exon1;Parent=MS.gene024550.t1
chr7.3 CDS 2043563 2045479 2043563 ID=cds.MS.gene024550.t1;Parent=MS.gene024550.t1
Gene Sequence

>MS.gene024550

ATGAGGATTATGATAAAGGGAGGTGTTTGGAAAAACACCGAGGATGAAATCCTGAAAGCTGCTGTTATGAAATATGGTAAAAATCAGTGGGCTCGTATCTCGTCCCTACTCGTTCGCAAATCTGCAAAACAGTGTAAAGCTCGTTGGTATGAGTGGTTAGATCCTTCCATTAAGAAGACTGAGTGGACTCGAGAAGAGGATGAGAAGCTACTTCATCTTGCTAAGCTTATGCCTACTCAGTGGAGAACCATTGCTCCCATTGTTGGTCGTACTCCTTCGCAGTGTCTTGAACGCTATGAGAAACTCCTTGACACCGCTTGTGTTAAGGATGATAACTATGAACCTGGTGATGACCCTAGGAAATTGCGTCCGGGGGAGATTGATCCGAATCCTGAATCAAAGCCTGCGCGACCTGATCCTGTTGATATGGATGAGGATGAGAAGGAGATGCTTTCCGAAGCACGTGCTCGGTTGGCTAACACGAAAGGTAAAAAAGCAAAAAGGAAAGCTAGGGAGAAACAGCTTGAGGAAGCGAGGAGGCTCGCTTCTTTACAGAAAAAGAGAGAACTGAAGGCTGCTGGGATTGATATAAGGCAGCGGAGGAGGAAAAGGAGAGGGATTGATTATAATGCAGAAATTCCGTTTGAGAAGAGGCCTCCTCCGGGTTATTTTGATGTTGCTGATGAGGATAGGGAGGTGGAGCAGCCTGCGTTCCCTACTACTATTGAAGAACTTGAGGGGAAAAGAAGGATTGATGTTGAGGCACAGTTGAGAAAGCAAGACGTTGCAAGGAATAAAATTGCAGAGAGGCAAGATGCCCCAGCTGCTATTCTGCATGCCAACAAGCTGAATGACCCAGAAACAGTTAGAAAGAGATCAAAACTGATGCTTCCACCGCCTCAGATTTCCGATCAAGAATTGGATGAAATTGCCAAGTTGGGTTATGCCAGTGACCTTGTGGGCAGCGAGGAACTCACCGAAGGCAGCAGTGCTACTCGTGCTCTTCTCCCTAATTATCCACAGACACCCAACCAAGCCAAGACTCCTTTAAGAACTCCTCAGAGAACACCAACTAGTAAAGGAGATGCTATCATGATGGAAGCTGAAAATTTGGCCAGGCTGAGGGAGTCTCAGACACCACTGTTAGGAGGAGAAAACCCGGAGTTGCATCCTTCAGATTTCTCCGGGGTCACTCCTAAGAAAAAGGAAATTCACACTCCAAACCCACTGCTGACTCCTTCTGCAACCCCTGGAAGTGCAGGCCTTACTCCCAGAAGTGGTATGACGCCGGCAAGGGATGGTTTTTCTTTTGGCATGACTCCGAAGGGAACTCCTCTCAGGGATGAGCTACATATCAATGAAGATATGGAGATGCGTGATAGTGCTAAGCTCGAGCTACGGAGACAAGCTGATATGAAAAAAAGTCTGCGCTCTGGTTTAAGCAGCCTTCCACAGCCTAAAAATGAGTACCAGATAGTGATGCAACCAATTCAAGAAGATGCTGAAGAGCCTGAGGAGAAGATTGAAGAGGATATGTCTGATAGAATGGCTAGAGAAAAGGCAGAAGAAGAGGCACGGCAGCAGGCATTACTTAGAAAACGATCAAAAGTCCTTCAAAGGGAACTTCCTAGGCCTCCTCTGGCATCTCTGGAGCTTATTAGGAACTCCTTGATAAGAGCTGACGGAGACAAAAGTTCATTTGTTCCACCAACCCCTATTGAGCAAGCCGACGAGATGATAAGAAAGGAGCTTCTAGCCTTACTGGAGCACGACAATGCTAAGTATCCGCTTGAGGAGATAGCAAATAAGGAGAAGAAGAAAGGATCCAAACGAGCAGCAAATGGGCCTACTATCCCTGTCATAGAAGATTATCAGGAGGACGAGATGAAATCTGTATGTTTTTATGCCCACCTTTAA
Protein sequence

>MS.gene024550.t1

MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKTEWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDTACVKDDNYEPGDDPRKLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTKGKKAKRKAREKQLEEARRLASLQKKRELKAAGIDIRQRRRKRRGIDYNAEIPFEKRPPPGYFDVADEDREVEQPAFPTTIEELEGKRRIDVEAQLRKQDVARNKIAERQDAPAAILHANKLNDPETVRKRSKLMLPPPQISDQELDEIAKLGYASDLVGSEELTEGSSATRALLPNYPQTPNQAKTPLRTPQRTPTSKGDAIMMEAENLARLRESQTPLLGGENPELHPSDFSGVTPKKKEIHTPNPLLTPSATPGSAGLTPRSGMTPARDGFSFGMTPKGTPLRDELHINEDMEMRDSAKLELRRQADMKKSLRSGLSSLPQPKNEYQIVMQPIQEDAEEPEEKIEEDMSDRMAREKAEEEARQQALLRKRSKVLQRELPRPPLASLELIRNSLIRADGDKSSFVPPTPIEQADEMIRKELLALLEHDNAKYPLEEIANKEKKKGSKRAANGPTIPVIEDYQEDEMKSVCFYAHL