Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene024909.t1 | XP_003610661.2 | 92.7 | 671 | 46 | 1 | 25 | 695 | 54 | 721 | 0.00E+00 | 1164.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene024909.t1 | Q93V99 | 52.9 | 695 | 301 | 9 | 9 | 690 | 54 | 735 | 6.8e-194 | 678.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene024909.t1 | G7K111 | 92.7 | 671 | 46 | 1 | 25 | 695 | 54 | 721 | 0.0e+00 | 1164.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene024909.t1 | TF | HB-HD-ZIP |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene024909.t1 | MTR_5g005600 | 94.388 | 695 | 36 | 1 | 1 | 695 | 30 | 721 | 0.0 | 1321 |
MS.gene024909.t1 | MTR_2g088470 | 52.874 | 696 | 301 | 11 | 3 | 690 | 56 | 732 | 0.0 | 696 |
MS.gene024909.t1 | MTR_4g047800 | 51.926 | 701 | 308 | 11 | 2 | 690 | 46 | 729 | 0.0 | 684 |
MS.gene024909.t1 | MTR_8g432540 | 43.135 | 721 | 366 | 13 | 1 | 690 | 99 | 806 | 0.0 | 572 |
MS.gene024909.t1 | MTR_7g076080 | 42.797 | 708 | 379 | 12 | 1 | 690 | 75 | 774 | 0.0 | 565 |
MS.gene024909.t1 | MTR_1g101280 | 39.210 | 709 | 387 | 13 | 14 | 690 | 54 | 750 | 4.94e-175 | 518 |
MS.gene024909.t1 | MTR_2g101720 | 38.946 | 683 | 369 | 13 | 20 | 690 | 143 | 789 | 6.97e-159 | 478 |
MS.gene024909.t1 | MTR_0198s0030 | 38.149 | 713 | 379 | 14 | 20 | 690 | 59 | 751 | 1.86e-156 | 471 |
MS.gene024909.t1 | MTR_6g477820 | 36.402 | 717 | 392 | 16 | 16 | 690 | 29 | 723 | 1.35e-148 | 449 |
MS.gene024909.t1 | MTR_5g029320 | 36.039 | 727 | 409 | 19 | 1 | 690 | 71 | 778 | 3.52e-143 | 438 |
MS.gene024909.t1 | MTR_7g427710 | 35.596 | 722 | 349 | 21 | 1 | 690 | 1 | 638 | 7.49e-124 | 383 |
MS.gene024909.t1 | MTR_2g030570 | 33.429 | 700 | 413 | 19 | 17 | 691 | 25 | 696 | 2.82e-111 | 352 |
MS.gene024909.t1 | MTR_2g030600 | 32.849 | 688 | 428 | 17 | 16 | 691 | 24 | 689 | 2.47e-105 | 336 |
MS.gene024909.t1 | MTR_2g030660 | 30.229 | 698 | 430 | 16 | 1 | 691 | 1 | 648 | 1.82e-86 | 285 |
MS.gene024909.t1 | MTR_2g083350 | 33.081 | 529 | 295 | 11 | 204 | 690 | 20 | 531 | 1.39e-81 | 269 |
MS.gene024909.t1 | MTR_2g083330 | 34.240 | 441 | 265 | 6 | 257 | 690 | 103 | 525 | 3.36e-78 | 260 |
MS.gene024909.t1 | MTR_7g427690 | 35.096 | 416 | 229 | 12 | 184 | 585 | 38 | 426 | 8.39e-72 | 240 |
MS.gene024909.t1 | MTR_7g427700 | 32.024 | 331 | 159 | 10 | 1 | 317 | 1 | 279 | 1.25e-37 | 146 |
MS.gene024909.t1 | MTR_7g427700 | 38.750 | 160 | 76 | 4 | 544 | 690 | 281 | 431 | 1.26e-19 | 92.4 |
MS.gene024909.t1 | MTR_0653s0020 | 36.548 | 197 | 101 | 5 | 386 | 578 | 1 | 177 | 1.90e-34 | 130 |
MS.gene024909.t1 | MTR_2g030690 | 30.420 | 286 | 188 | 7 | 409 | 691 | 1 | 278 | 7.31e-27 | 111 |
MS.gene024909.t1 | MTR_5g046040 | 39.683 | 126 | 74 | 2 | 14 | 137 | 31 | 156 | 1.49e-22 | 100 |
MS.gene024909.t1 | MTR_7g027265 | 36.667 | 120 | 75 | 1 | 16 | 134 | 17 | 136 | 4.43e-21 | 90.5 |
MS.gene024909.t1 | MTR_1g105420 | 37.989 | 179 | 98 | 7 | 71 | 245 | 1 | 170 | 7.25e-21 | 92.0 |
MS.gene024909.t1 | MTR_1g105420 | 73.171 | 41 | 10 | 1 | 318 | 357 | 171 | 211 | 4.49e-13 | 69.3 |
MS.gene024909.t1 | MTR_6g027290 | 32.331 | 133 | 87 | 3 | 7 | 137 | 17 | 148 | 1.26e-15 | 75.9 |
MS.gene024909.t1 | MTR_2g451350 | 35.385 | 130 | 83 | 1 | 213 | 341 | 1 | 130 | 2.56e-15 | 73.6 |
MS.gene024909.t1 | MTR_0653s0010 | 41.803 | 122 | 49 | 4 | 583 | 690 | 1 | 114 | 6.21e-15 | 72.0 |
MS.gene024909.t1 | MTR_7g027605 | 41.053 | 95 | 50 | 2 | 289 | 383 | 3 | 91 | 1.08e-14 | 70.5 |
MS.gene024909.t1 | MTR_1g105425 | 53.226 | 62 | 28 | 1 | 2 | 62 | 91 | 152 | 1.30e-13 | 69.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene024909.t1 | AT4G21750 | 54.369 | 721 | 281 | 13 | 9 | 694 | 54 | 761 | 0.0 | 750 |
MS.gene024909.t1 | AT4G21750 | 54.369 | 721 | 281 | 13 | 9 | 694 | 54 | 761 | 0.0 | 750 |
MS.gene024909.t1 | AT4G21750 | 54.369 | 721 | 281 | 13 | 9 | 694 | 54 | 761 | 0.0 | 750 |
MS.gene024909.t1 | AT4G21750 | 54.369 | 721 | 281 | 13 | 9 | 694 | 54 | 761 | 0.0 | 750 |
MS.gene024909.t1 | AT4G04890 | 55.108 | 695 | 286 | 10 | 9 | 690 | 54 | 735 | 0.0 | 748 |
MS.gene024909.t1 | AT4G04890 | 55.108 | 695 | 286 | 10 | 9 | 690 | 54 | 735 | 0.0 | 748 |
MS.gene024909.t1 | AT1G05230 | 50.216 | 695 | 312 | 10 | 2 | 690 | 50 | 716 | 0.0 | 672 |
MS.gene024909.t1 | AT1G05230 | 50.216 | 695 | 312 | 10 | 2 | 690 | 50 | 716 | 0.0 | 672 |
MS.gene024909.t1 | AT1G05230 | 50.216 | 695 | 312 | 10 | 2 | 690 | 50 | 716 | 0.0 | 672 |
MS.gene024909.t1 | AT1G05230 | 50.216 | 695 | 312 | 10 | 2 | 690 | 50 | 716 | 0.0 | 672 |
MS.gene024909.t1 | AT1G05230 | 50.216 | 695 | 312 | 10 | 2 | 690 | 50 | 716 | 0.0 | 672 |
MS.gene024909.t1 | AT1G05230 | 50.216 | 695 | 312 | 10 | 2 | 690 | 50 | 716 | 0.0 | 672 |
MS.gene024909.t1 | AT1G05230 | 50.216 | 695 | 312 | 10 | 2 | 690 | 50 | 716 | 0.0 | 672 |
MS.gene024909.t1 | AT1G05230 | 50.216 | 695 | 312 | 10 | 2 | 690 | 50 | 716 | 0.0 | 672 |
MS.gene024909.t1 | AT1G05230 | 50.216 | 695 | 312 | 10 | 2 | 690 | 50 | 716 | 0.0 | 672 |
MS.gene024909.t1 | AT1G05230 | 50.216 | 695 | 312 | 10 | 2 | 690 | 50 | 716 | 0.0 | 672 |
MS.gene024909.t1 | AT1G05230 | 50.216 | 695 | 310 | 11 | 2 | 690 | 50 | 714 | 0.0 | 667 |
MS.gene024909.t1 | AT1G05230 | 48.616 | 578 | 266 | 9 | 2 | 573 | 50 | 602 | 0.0 | 537 |
MS.gene024909.t1 | AT4G00730 | 42.232 | 708 | 364 | 14 | 1 | 690 | 118 | 798 | 0.0 | 536 |
MS.gene024909.t1 | AT3G61150 | 40.189 | 739 | 363 | 16 | 2 | 690 | 94 | 803 | 2.58e-178 | 529 |
MS.gene024909.t1 | AT2G32370 | 41.134 | 688 | 355 | 16 | 14 | 687 | 66 | 717 | 7.74e-163 | 486 |
MS.gene024909.t1 | AT5G52170 | 38.177 | 702 | 361 | 12 | 1 | 690 | 38 | 678 | 1.21e-156 | 469 |
MS.gene024909.t1 | AT5G52170 | 38.177 | 702 | 361 | 12 | 1 | 690 | 38 | 678 | 1.21e-156 | 469 |
MS.gene024909.t1 | AT5G52170 | 37.980 | 703 | 366 | 12 | 1 | 690 | 38 | 683 | 3.54e-155 | 465 |
MS.gene024909.t1 | AT1G73360 | 38.008 | 713 | 373 | 17 | 16 | 690 | 32 | 713 | 5.44e-147 | 445 |
MS.gene024909.t1 | AT1G17920 | 38.540 | 685 | 379 | 11 | 20 | 690 | 25 | 681 | 2.25e-146 | 442 |
MS.gene024909.t1 | AT1G17920 | 38.540 | 685 | 379 | 11 | 20 | 690 | 25 | 681 | 2.25e-146 | 442 |
MS.gene024909.t1 | AT1G79840 | 37.842 | 695 | 366 | 18 | 12 | 690 | 40 | 684 | 6.56e-146 | 441 |
MS.gene024909.t1 | AT1G79840 | 37.842 | 695 | 366 | 18 | 12 | 690 | 40 | 684 | 6.56e-146 | 441 |
MS.gene024909.t1 | AT1G79840 | 37.842 | 695 | 366 | 18 | 12 | 690 | 98 | 742 | 2.46e-145 | 442 |
MS.gene024909.t1 | AT1G79840 | 37.842 | 695 | 366 | 18 | 12 | 690 | 127 | 771 | 7.85e-145 | 441 |
MS.gene024909.t1 | AT5G46880 | 34.631 | 719 | 420 | 20 | 7 | 690 | 103 | 806 | 1.83e-125 | 392 |
MS.gene024909.t1 | AT5G46880 | 34.631 | 719 | 420 | 20 | 7 | 690 | 103 | 806 | 1.83e-125 | 392 |
MS.gene024909.t1 | AT5G46880 | 34.631 | 719 | 420 | 20 | 7 | 690 | 103 | 806 | 1.83e-125 | 392 |
MS.gene024909.t1 | AT1G79840 | 37.961 | 569 | 297 | 15 | 12 | 570 | 98 | 620 | 3.47e-120 | 373 |
MS.gene024909.t1 | AT3G03260 | 33.797 | 719 | 403 | 23 | 2 | 687 | 13 | 691 | 3.20e-114 | 359 |
MS.gene024909.t1 | AT4G17710 | 34.055 | 693 | 378 | 17 | 9 | 691 | 81 | 704 | 1.06e-111 | 353 |
MS.gene024909.t1 | AT4G25530 | 33.186 | 681 | 408 | 16 | 17 | 690 | 42 | 682 | 1.73e-109 | 347 |
MS.gene024909.t1 | AT4G00730 | 39.168 | 457 | 243 | 9 | 1 | 444 | 118 | 552 | 8.61e-99 | 315 |
MS.gene024909.t1 | AT5G17320 | 31.944 | 720 | 431 | 23 | 8 | 690 | 18 | 715 | 4.48e-96 | 312 |
MS.gene024909.t1 | AT1G34650 | 31.312 | 709 | 424 | 20 | 21 | 690 | 21 | 705 | 5.78e-89 | 293 |
MS.gene024909.t1 | AT1G79840 | 38.826 | 443 | 218 | 13 | 12 | 445 | 98 | 496 | 2.26e-88 | 286 |
MS.gene024909.t1 | AT3G03260 | 32.857 | 560 | 323 | 19 | 2 | 542 | 13 | 538 | 5.36e-81 | 267 |
MS.gene024909.t1 | AT5G07260 | 26.212 | 557 | 329 | 22 | 82 | 631 | 10 | 491 | 6.50e-30 | 125 |
MS.gene024909.t1 | AT5G07260 | 26.126 | 555 | 327 | 21 | 82 | 631 | 10 | 486 | 2.40e-29 | 123 |
Find 182 sgRNAs with CRISPR-Local
Find 289 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCGCCAGCTTGAAAGGTTTA+TGG | 0.151518 | 5.3:+727987 | MS.gene024909:intron |
ATTTCACGCTCTGCTGATTT+TGG | 0.175951 | 5.3:+728078 | MS.gene024909:CDS |
GTTAATTCTGGACTTGCTTT+TGG | 0.195569 | 5.3:+729269 | MS.gene024909:CDS |
AACTGCATCCAGATGGAATA+TGG | 0.242195 | 5.3:+728928 | MS.gene024909:CDS |
TCTCTTCTCTGAGCATCATT+AGG | 0.259035 | 5.3:-726944 | None:intergenic |
ATTTCAAATGGTCGTGATTC+TGG | 0.286392 | 5.3:+729883 | MS.gene024909:CDS |
TAGCTCCTCAGTACAGATTA+AGG | 0.286789 | 5.3:+728161 | MS.gene024909:CDS |
TATAAACCTCTAGTTAATTC+TGG | 0.304749 | 5.3:+729257 | MS.gene024909:CDS |
ACAACCAACGTTCCAGAAAA+AGG | 0.314262 | 5.3:+726744 | MS.gene024909:CDS |
ACCCAACGCAAATCAAGTTT+TGG | 0.325446 | 5.3:+726990 | MS.gene024909:CDS |
AACACCCTCCTTGGAGGAAC+TGG | 0.338188 | 5.3:-729683 | None:intergenic |
GAGAATTGCACTGATGTAAC+TGG | 0.338466 | 5.3:+730518 | MS.gene024909:CDS |
AAGACCTTAGTGAGACCATT+TGG | 0.340133 | 5.3:-729065 | None:intergenic |
CGTCTTACTCTGCTTCCTTC+CGG | 0.342730 | 5.3:+730611 | MS.gene024909:CDS |
ACAACCTCCGGTCCGTTTCC+AGG | 0.348649 | 5.3:-729572 | None:intergenic |
GTTTACAGTATCTCACAAAA+TGG | 0.349194 | 5.3:-728908 | None:intergenic |
CGCCAGCTTGAAAGGTTTAT+GGG | 0.349672 | 5.3:+727988 | MS.gene024909:intron |
CTCTTCTCTGAGCATCATTA+GGG | 0.354899 | 5.3:-726943 | None:intergenic |
CCAGATCCGACATTCATAAT+TGG | 0.363963 | 5.3:-730674 | None:intergenic |
GAGAATCTCAGTGACATAAT+TGG | 0.367087 | 5.3:-728283 | None:intergenic |
GACTTGAGTCGCCGCCATTC+AGG | 0.368603 | 5.3:-730589 | None:intergenic |
TTATATAGGTTCAAACTGAT+AGG | 0.374562 | 5.3:+727629 | MS.gene024909:intron |
TCAGCAACAAATTGATGAAA+TGG | 0.376687 | 5.3:+726784 | MS.gene024909:CDS |
TGGAACGTTGGTTGTGTTGT+TGG | 0.379260 | 5.3:-726736 | None:intergenic |
ACTTACAGTGATACGAAATA+AGG | 0.385266 | 5.3:-729917 | None:intergenic |
ACCAAACTGGCTAGGACATA+TGG | 0.389902 | 5.3:+728240 | MS.gene024909:CDS |
ATTGTTGGATGATGTTATAT+TGG | 0.393371 | 5.3:-728043 | None:intergenic |
ATTGTAGAGCTTGCTGTTGT+TGG | 0.393723 | 5.3:+728204 | MS.gene024909:CDS |
GAGATGAAGTTAATAGATAC+AGG | 0.396482 | 5.3:+727692 | MS.gene024909:CDS |
TCCACATGCAAGGCTAGCTC+TGG | 0.401494 | 5.3:+730742 | MS.gene024909:CDS |
CGGCGGTATAGTTCATGAAT+TGG | 0.401952 | 5.3:+729855 | MS.gene024909:CDS |
AGCTTTAATCCCGATGTGTT+GGG | 0.405398 | 5.3:-728348 | None:intergenic |
CCAATTATGAATGTCGGATC+TGG | 0.406349 | 5.3:+730674 | MS.gene024909:CDS |
ACACTTGAAGTCCTTTCAAC+TGG | 0.406882 | 5.3:+728698 | MS.gene024909:CDS |
AAGTATTTCCCAAGGGCTAA+TGG | 0.411663 | 5.3:+728324 | MS.gene024909:CDS |
AGAGAAGAGAGCTGAGCCTT+CGG | 0.419978 | 5.3:+726957 | MS.gene024909:CDS |
CTCTGAGCATCATTAGGGTT+AGG | 0.434546 | 5.3:-726938 | None:intergenic |
AGACCTTAGTGAGACCATTT+GGG | 0.436761 | 5.3:-729064 | None:intergenic |
GCATTTGTTATACACCCATC+TGG | 0.446371 | 5.3:-730647 | None:intergenic |
GACTGGAGAATGCTCTCTTA+AGG | 0.451510 | 5.3:+727794 | MS.gene024909:CDS |
TCCATATGTCCTAGCCAGTT+TGG | 0.452823 | 5.3:-728241 | None:intergenic |
TTCAGGATTTCATGCATTGT+AGG | 0.456298 | 5.3:-730572 | None:intergenic |
GCCACTACCCATATTCCATC+TGG | 0.457430 | 5.3:-728936 | None:intergenic |
AGAAAATCAAACACCCTCCT+TGG | 0.457924 | 5.3:-729692 | None:intergenic |
ACCAAAACTTGATTTGCGTT+GGG | 0.459278 | 5.3:-726991 | None:intergenic |
TAATGAAATTAGATGCCATT+AGG | 0.460205 | 5.3:-730830 | None:intergenic |
TGACATTTCCCCAGCGGTAG+TGG | 0.460740 | 5.3:-727752 | None:intergenic |
AAAACTGCAGTGATGCCTAA+TGG | 0.465524 | 5.3:+730815 | MS.gene024909:CDS |
AGAGAGCTGAGCCTTCGGAC+TGG | 0.466205 | 5.3:+726962 | MS.gene024909:CDS |
GAGAGCTGAGCCTTCGGACT+GGG | 0.469640 | 5.3:+726963 | MS.gene024909:CDS |
GCTAGCTTTAGTACAAGTAT+TGG | 0.471031 | 5.3:+729518 | MS.gene024909:CDS |
TGTTGGGACCATTAGCCCTT+GGG | 0.476328 | 5.3:-728332 | None:intergenic |
ATGAGGATATCTACAAGATC+AGG | 0.482347 | 5.3:-728411 | None:intergenic |
GAATTGGCTCACATTTCAAA+TGG | 0.482575 | 5.3:+729871 | MS.gene024909:CDS |
TTGCTGAGTGTGGCGGCGAT+AGG | 0.483290 | 5.3:-726768 | None:intergenic |
AGCTCCTCAGTACAGATTAA+GGG | 0.487431 | 5.3:+728162 | MS.gene024909:CDS |
AACCAAAACTTGATTTGCGT+TGG | 0.487544 | 5.3:-726992 | None:intergenic |
AGAGCTTGCTGTTGTTGGAA+TGG | 0.487738 | 5.3:+728209 | MS.gene024909:CDS |
GTTCTTCTACAACACATGCT+TGG | 0.487768 | 5.3:+729540 | MS.gene024909:CDS |
AAACGGCCACCAACGTTCCA+CGG | 0.489293 | 5.3:+729345 | MS.gene024909:CDS |
GCTAATGGTCCCAACACATC+GGG | 0.493856 | 5.3:+728339 | MS.gene024909:CDS |
AATGGCTGAACTGACCAAAC+TGG | 0.494651 | 5.3:+728227 | MS.gene024909:CDS |
TGACGATCAGCAGCTAAGAC+TGG | 0.495757 | 5.3:+727777 | MS.gene024909:CDS |
CGAGAGTCTGCAGGATCTGT+TGG | 0.502957 | 5.3:-728018 | None:intergenic |
AAGCTTTAATCCCGATGTGT+TGG | 0.503073 | 5.3:-728349 | None:intergenic |
TTTGGCTTCCAGTTCCTCCA+AGG | 0.503857 | 5.3:+729675 | MS.gene024909:CDS |
CCACTGTTAACACTTTGATC+AGG | 0.506278 | 5.3:+730774 | MS.gene024909:CDS |
GTCATGACCATTACAACCTC+CGG | 0.508691 | 5.3:-729584 | None:intergenic |
AAATGTAGAAGTTGATGATC+AGG | 0.509315 | 5.3:+729220 | MS.gene024909:CDS |
AATAACATGAGTGCTATTGT+TGG | 0.512062 | 5.3:-728058 | None:intergenic |
TATATAGGTTCAAACTGATA+GGG | 0.512992 | 5.3:+727630 | MS.gene024909:intron |
GTAGGAGAGGCTTTCACTGT+TGG | 0.513732 | 5.3:+728138 | MS.gene024909:CDS |
GCTTCCAGTTCCTCCAAGGA+GGG | 0.515083 | 5.3:+729679 | MS.gene024909:CDS |
ACATCGGGATTAAAGCTTGA+GGG | 0.520054 | 5.3:+728354 | MS.gene024909:CDS |
ACTGCATCCAGATGGAATAT+GGG | 0.521116 | 5.3:+728929 | MS.gene024909:CDS |
GAAGTCCTTTCAACTGGAGT+GGG | 0.523037 | 5.3:+728704 | MS.gene024909:CDS |
ATTGAATCTTGCGGAAAGGT+TGG | 0.528383 | 5.3:+729493 | MS.gene024909:CDS |
AACGGCCACCAACGTTCCAC+GGG | 0.530317 | 5.3:+729346 | MS.gene024909:CDS |
TATGTCACTGAGATTCTCAA+TGG | 0.532052 | 5.3:+728288 | MS.gene024909:CDS |
TGGACAAAGGTACCTGGAAA+CGG | 0.533786 | 5.3:+729560 | MS.gene024909:CDS |
AAATCAAACACCCTCCTTGG+AGG | 0.534430 | 5.3:-729689 | None:intergenic |
TGCATTGTAGGTATTTGCAC+AGG | 0.535629 | 5.3:-730560 | None:intergenic |
ATTAGTACTTACCACTTGCA+AGG | 0.535950 | 5.3:-728744 | None:intergenic |
TTGATTGAGACACTCCCAAA+TGG | 0.537043 | 5.3:+729050 | MS.gene024909:CDS |
GAATGCTCTCTTAAGGAAAG+AGG | 0.538971 | 5.3:+727801 | MS.gene024909:CDS |
CATCAATTTGTTGCTGAGTG+TGG | 0.539652 | 5.3:-726778 | None:intergenic |
CGAGTAGGAACATGTGGGGA+GGG | 0.539762 | 5.3:-728879 | None:intergenic |
TGTGGAAGTTCCACTACCGC+TGG | 0.541115 | 5.3:+727742 | MS.gene024909:CDS |
CATGCTTGGACAAAGGTACC+TGG | 0.544698 | 5.3:+729554 | MS.gene024909:CDS |
GCACTTAGCACAACACTGAC+GGG | 0.544921 | 5.3:-729641 | None:intergenic |
TGAAGTCCTTTCAACTGGAG+TGG | 0.545864 | 5.3:+728703 | MS.gene024909:CDS |
AAACGGACCGGAGGTTGTAA+TGG | 0.547300 | 5.3:+729577 | MS.gene024909:CDS |
GTGTTGGGACCATTAGCCCT+TGG | 0.548264 | 5.3:-728333 | None:intergenic |
ATTATGAATGTCGGATCTGG+AGG | 0.550174 | 5.3:+730677 | MS.gene024909:CDS |
GGCTTCCAGTTCCTCCAAGG+AGG | 0.551888 | 5.3:+729678 | MS.gene024909:CDS |
TACCTCCCACTCCAGTTGAA+AGG | 0.552733 | 5.3:-728709 | None:intergenic |
GATGGGTGTATAACAAATGC+AGG | 0.554349 | 5.3:+730650 | MS.gene024909:CDS |
TACTGTAAACTGCATCCAGA+TGG | 0.557363 | 5.3:+728921 | MS.gene024909:CDS |
TACAACACATGCTTGGACAA+AGG | 0.558020 | 5.3:+729547 | MS.gene024909:CDS |
GAACAGGCGCACTTCGCTGA+AGG | 0.561506 | 5.3:+727018 | MS.gene024909:CDS |
CAGTGGGATATTCTCTCCGC+CGG | 0.564704 | 5.3:+729835 | MS.gene024909:intron |
CTGAACTGACCAAACTGGCT+AGG | 0.569467 | 5.3:+728232 | MS.gene024909:CDS |
GAAAAGTATATTGAATCTTG+CGG | 0.569980 | 5.3:+729484 | MS.gene024909:CDS |
GTGGAAGTTCCACTACCGCT+GGG | 0.571737 | 5.3:+727743 | MS.gene024909:CDS |
AATTGGTGGGAAGCCAAAGA+GGG | 0.573774 | 5.3:-728266 | None:intergenic |
GTTACCACATGCAACGTATG+TGG | 0.576120 | 5.3:+727724 | MS.gene024909:CDS |
AGCACTTAGCACAACACTGA+CGG | 0.577940 | 5.3:-729642 | None:intergenic |
AATCTCAGTGACATAATTGG+TGG | 0.578666 | 5.3:-728280 | None:intergenic |
AGGGTCTTAATGAGAAGCAA+AGG | 0.578872 | 5.3:+728181 | MS.gene024909:CDS |
GGAGTTGCTGGTGGTAACAA+TGG | 0.581415 | 5.3:+728099 | MS.gene024909:CDS |
TGATCTTGTAGATATCCTCA+TGG | 0.582197 | 5.3:+728413 | MS.gene024909:CDS |
GCAGGACCAATTATGAATGT+CGG | 0.584913 | 5.3:+730668 | MS.gene024909:CDS |
ACAACCAGAGGGTCTTCTGT+TGG | 0.585992 | 5.3:-729027 | None:intergenic |
ATGTTCCCGTGGAACGTTGG+TGG | 0.586357 | 5.3:-729351 | None:intergenic |
AGAACCAACAGAAGACCCTC+TGG | 0.588399 | 5.3:+729023 | MS.gene024909:CDS |
AACGTTCCACGGGAACATCA+TGG | 0.588608 | 5.3:+729356 | MS.gene024909:CDS |
GAGTAGGAACATGTGGGGAG+GGG | 0.590439 | 5.3:-728878 | None:intergenic |
TTGATTCTATTCCACATGCA+AGG | 0.590966 | 5.3:+730732 | MS.gene024909:CDS |
CACATCGGGATTAAAGCTTG+AGG | 0.592677 | 5.3:+728353 | MS.gene024909:CDS |
GGCTAATGGTCCCAACACAT+CGG | 0.594460 | 5.3:+728338 | MS.gene024909:CDS |
ATATTGGCACGAGAGTCTGC+AGG | 0.595802 | 5.3:-728027 | None:intergenic |
GTATATTGAATCTTGCGGAA+AGG | 0.597531 | 5.3:+729489 | MS.gene024909:CDS |
GTCCTTTCAACTGGAGTGGG+AGG | 0.597763 | 5.3:+728707 | MS.gene024909:CDS |
CCACATGCAAGGCTAGCTCT+GGG | 0.598313 | 5.3:+730743 | MS.gene024909:CDS |
AATACATGAAGTATTTCCCA+AGG | 0.599100 | 5.3:+728316 | MS.gene024909:CDS |
ATCTCAGTGACATAATTGGT+GGG | 0.600678 | 5.3:-728279 | None:intergenic |
TGATCAGGAACACTGTGGAA+AGG | 0.601274 | 5.3:+730789 | MS.gene024909:CDS |
AAAGGTACCTGGAAACGGAC+CGG | 0.603908 | 5.3:+729565 | MS.gene024909:CDS |
CAATTTGTTGCTGAGTGTGG+CGG | 0.605203 | 5.3:-726775 | None:intergenic |
CACTGAGATTCTCAATGGAG+AGG | 0.605470 | 5.3:+728293 | MS.gene024909:CDS |
TGTTGCATTTAACAGATGCA+AGG | 0.605749 | 5.3:-728967 | None:intergenic |
ACAATGCATGAAATCCTGAA+TGG | 0.606726 | 5.3:+730575 | MS.gene024909:CDS |
CAATTCATGAACTATACCGC+CGG | 0.609707 | 5.3:-729854 | None:intergenic |
ACTCCCAAATGGTCTCACTA+AGG | 0.610306 | 5.3:+729061 | MS.gene024909:CDS |
TAATTGGTGGGAAGCCAAAG+AGG | 0.613117 | 5.3:-728267 | None:intergenic |
GGAGCACACCACCGCATGGT+AGG | 0.614498 | 5.3:+728120 | MS.gene024909:CDS |
ACGAGTAGGAACATGTGGGG+AGG | 0.617756 | 5.3:-728880 | None:intergenic |
ACAGTGAGATTGACTCCGGA+GGG | 0.618021 | 5.3:+729458 | MS.gene024909:intron |
TGTAGATATCCTCATGGATG+TGG | 0.622507 | 5.3:+728419 | MS.gene024909:CDS |
ATGTACAGTGAGATTGACTC+CGG | 0.623201 | 5.3:+729454 | MS.gene024909:intron |
TTGGGTCTAACCCAGTCCGA+AGG | 0.623750 | 5.3:-726973 | None:intergenic |
GCAAGTCCAGAATTAACTAG+AGG | 0.625489 | 5.3:-729263 | None:intergenic |
AGATGAAGTTAATAGATACA+GGG | 0.626082 | 5.3:+727693 | MS.gene024909:CDS |
TCCAGATGGAATATGGGTAG+TGG | 0.628113 | 5.3:+728935 | MS.gene024909:CDS |
ACACCACCGCATGGTAGGAG+AGG | 0.632377 | 5.3:+728125 | MS.gene024909:CDS |
CCCAGAGCTAGCCTTGCATG+TGG | 0.637254 | 5.3:-730743 | None:intergenic |
TGGGATATTCTCTCCGCCGG+CGG | 0.644828 | 5.3:+729838 | MS.gene024909:CDS |
ATTGGTGGGAAGCCAAAGAG+GGG | 0.648389 | 5.3:-728265 | None:intergenic |
TTATGAATGTCGGATCTGGA+GGG | 0.649910 | 5.3:+730678 | MS.gene024909:CDS |
AAGCCTCTCCTACCATGCGG+TGG | 0.649944 | 5.3:-728128 | None:intergenic |
CAATGGAGCACACCACCGCA+TGG | 0.649965 | 5.3:+728116 | MS.gene024909:CDS |
AGAATTGCACTGATGTAACT+GGG | 0.652163 | 5.3:+730519 | MS.gene024909:CDS |
ATGATGTTCCCGTGGAACGT+TGG | 0.653734 | 5.3:-729354 | None:intergenic |
TACAGTGAGATTGACTCCGG+AGG | 0.655167 | 5.3:+729457 | MS.gene024909:intron |
TATATACCATGATGTTCCCG+TGG | 0.660275 | 5.3:-729362 | None:intergenic |
CTACGATGGAGCCTTGCAAG+TGG | 0.661414 | 5.3:+728733 | MS.gene024909:CDS |
TGTCTCAATCAAACAACCAG+AGG | 0.663405 | 5.3:-729039 | None:intergenic |
TTTGACGAGTAGGAACATGT+GGG | 0.667790 | 5.3:-728884 | None:intergenic |
GTCTCAATCAAACAACCAGA+GGG | 0.671321 | 5.3:-729038 | None:intergenic |
ATGAAGTTAATAGATACAGG+GGG | 0.672309 | 5.3:+727695 | MS.gene024909:CDS |
AAATTCAGAGCAGAGTGATG+TGG | 0.672413 | 5.3:+730484 | MS.gene024909:CDS |
GGAGTGGGAGGTAACTACGA+TGG | 0.675779 | 5.3:+728719 | MS.gene024909:CDS |
GATGAAGTTAATAGATACAG+GGG | 0.679151 | 5.3:+727694 | MS.gene024909:CDS |
TGAGGGTTCGAAAGAATCCG+TGG | 0.680929 | 5.3:+728371 | MS.gene024909:CDS |
ACTTCCACATACGTTGCATG+TGG | 0.681040 | 5.3:-727728 | None:intergenic |
AAGACCCTTAATCTGTACTG+AGG | 0.682265 | 5.3:-728166 | None:intergenic |
TGGAAGTTCCACTACCGCTG+GGG | 0.684408 | 5.3:+727744 | MS.gene024909:CDS |
ATGCATGAAATCCTGAATGG+CGG | 0.684425 | 5.3:+730578 | MS.gene024909:CDS |
TGTAGAAGTTGATGATCAGG+TGG | 0.686691 | 5.3:+729223 | MS.gene024909:CDS |
TTGACGAGTAGGAACATGTG+GGG | 0.689635 | 5.3:-728883 | None:intergenic |
TTGGTGGGAAGCCAAAGAGG+GGG | 0.695051 | 5.3:-728264 | None:intergenic |
ATACATGAAGTATTTCCCAA+GGG | 0.695847 | 5.3:+728317 | MS.gene024909:CDS |
AGCATTAATCATGACCACCA+CGG | 0.701180 | 5.3:-728388 | None:intergenic |
GGTACCTGGAAACGGACCGG+AGG | 0.704720 | 5.3:+729568 | MS.gene024909:CDS |
CACTTTGATCAGGAACACTG+TGG | 0.708628 | 5.3:+730784 | MS.gene024909:CDS |
TTCATGAACTATACCGCCGG+CGG | 0.721861 | 5.3:-729851 | None:intergenic |
GTCATGTGACATTTCCCCAG+CGG | 0.729104 | 5.3:-727758 | None:intergenic |
AATGACTCACCACATCCATG+AGG | 0.740230 | 5.3:-728428 | None:intergenic |
GGGTTCGAAAGAATCCGTGG+TGG | 0.741743 | 5.3:+728374 | MS.gene024909:CDS |
TGAAGTTAATAGATACAGGG+GGG | 0.744765 | 5.3:+727696 | MS.gene024909:CDS |
TGAAAGCCTCTCCTACCATG+CGG | 0.748941 | 5.3:-728131 | None:intergenic |
CCTGATCAAAGTGTTAACAG+TGG | 0.772385 | 5.3:-730774 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTTTTAAAAAAAAAAA+AGG | - | chr5.3:729389-729408 | None:intergenic | 0.0% |
!! | AAATTTAATAATATAAATGG+AGG | - | chr5.3:728625-728644 | None:intergenic | 10.0% |
!! | AAGTTATGTAAAATTAAAAT+TGG | + | chr5.3:729936-729955 | MS.gene024909:intron | 10.0% |
!! | AATTTAATAATATAAATGGA+GGG | - | chr5.3:728624-728643 | None:intergenic | 10.0% |
!! | TCAGATAAAATATATAAAAA+TGG | - | chr5.3:726821-726840 | None:intergenic | 10.0% |
!! | TTAATAATAGTTTATTATGT+TGG | + | chr5.3:729117-729136 | MS.gene024909:intron | 10.0% |
!!! | AATAATATTCTAAAAATACT+TGG | - | chr5.3:728545-728564 | None:intergenic | 10.0% |
!!! | TTTATTTTAAAAAAGAACAT+TGG | + | chr5.3:728567-728586 | MS.gene024909:intron | 10.0% |
!!! | TTTTTATATATGTGTATATA+TGG | - | chr5.3:730312-730331 | None:intergenic | 10.0% |
!! | AAACATTAATGCAAATAATA+AGG | - | chr5.3:728482-728501 | None:intergenic | 15.0% |
!! | ATATTTAATTGAATTTACAG+TGG | + | chr5.3:729818-729837 | MS.gene024909:intron | 15.0% |
!! | TATTTAATTGAATTTACAGT+GGG | + | chr5.3:729819-729838 | MS.gene024909:intron | 15.0% |
!!! | AACATTAAAAGTCATTTTTA+TGG | - | chr5.3:730189-730208 | None:intergenic | 15.0% |
!!! | AATTTTCCATAAATGTATTA+AGG | + | chr5.3:730233-730252 | MS.gene024909:intron | 15.0% |
!!! | ACATTAAAAGTCATTTTTAT+GGG | - | chr5.3:730188-730207 | None:intergenic | 15.0% |
!!! | ATTAATATTATTTTAGGTGA+AGG | - | chr5.3:729102-729121 | None:intergenic | 15.0% |
!!! | ATTAATTAAATGCTTCTTTT+CGG | + | chr5.3:727574-727593 | MS.gene024909:intron | 15.0% |
!!! | ATTATTAGTGTTTCAAATTT+TGG | - | chr5.3:727416-727435 | None:intergenic | 15.0% |
!!! | ATTATTTTTCTTTGTAACAT+AGG | - | chr5.3:727231-727250 | None:intergenic | 15.0% |
!!! | GTATATTAATTTTTTGAACT+TGG | + | chr5.3:726884-726903 | MS.gene024909:intron | 15.0% |
!!! | TTAATGTTATTTACAGTAAT+TGG | + | chr5.3:730201-730220 | MS.gene024909:intron | 15.0% |
!!! | TTATTAGTGTTTCAAATTTT+GGG | - | chr5.3:727415-727434 | None:intergenic | 15.0% |
!! | AAAAAAAAATTACATGCAGT+TGG | - | chr5.3:727053-727072 | None:intergenic | 20.0% |
!! | ATTAAAATTGGTATAGTATC+AGG | + | chr5.3:729948-729967 | MS.gene024909:intron | 20.0% |
!! | TATGAACCTTAATACATTTA+TGG | - | chr5.3:730242-730261 | None:intergenic | 20.0% |
!! | TTAAAATTGGTATAGTATCA+GGG | + | chr5.3:729949-729968 | MS.gene024909:intron | 20.0% |
!!! | AAATTTGTTTTCAGAATCAA+TGG | + | chr5.3:728639-728658 | MS.gene024909:intron | 20.0% |
!!! | AATATGACTAGATCAAATTT+TGG | + | chr5.3:730283-730302 | MS.gene024909:intron | 20.0% |
!!! | CATTTTTATGGGAAAATTAA+CGG | - | chr5.3:730177-730196 | None:intergenic | 20.0% |
!!! | TATGTAAGAGTTGATAATAA+TGG | - | chr5.3:727160-727179 | None:intergenic | 20.0% |
!!! | TATGTTGGATTATTTTAATG+TGG | + | chr5.3:729132-729151 | MS.gene024909:intron | 20.0% |
! | AACATAGGTGATAAATTTAG+AGG | - | chr5.3:727216-727235 | None:intergenic | 25.0% |
! | AGATGAAGTTAATAGATACA+GGG | + | chr5.3:727693-727712 | MS.gene024909:CDS | 25.0% |
! | ATCACTAATATACTATACAG+TGG | - | chr5.3:730409-730428 | None:intergenic | 25.0% |
! | ATGATGCAATCATAATATTG+CGG | - | chr5.3:727389-727408 | None:intergenic | 25.0% |
! | ATTGTTGGATGATGTTATAT+TGG | - | chr5.3:728046-728065 | None:intergenic | 25.0% |
! | GCATTAATGTTTCAAAAACT+TGG | + | chr5.3:728490-728509 | MS.gene024909:intron | 25.0% |
! | TAAAATTGGTATAGTATCAG+GGG | + | chr5.3:729950-729969 | MS.gene024909:intron | 25.0% |
! | TATAAACCTCTAGTTAATTC+TGG | + | chr5.3:729257-729276 | MS.gene024909:CDS | 25.0% |
! | TATATAGGTTCAAACTGATA+GGG | + | chr5.3:727630-727649 | MS.gene024909:intron | 25.0% |
! | TTATATAGGTTCAAACTGAT+AGG | + | chr5.3:727629-727648 | MS.gene024909:intron | 25.0% |
! | TTATTTACATTGCACTTCAA+TGG | + | chr5.3:727332-727351 | MS.gene024909:intron | 25.0% |
!! | CTTTACTTGCTCTATATTTT+TGG | + | chr5.3:726862-726881 | MS.gene024909:intron | 25.0% |
!! | GAAAAGTATATTGAATCTTG+CGG | + | chr5.3:729484-729503 | MS.gene024909:CDS | 25.0% |
!!! | GTTGTCTTGTTTTTTTAAAC+AGG | + | chr5.3:729184-729203 | MS.gene024909:intron | 25.0% |
!!! | GTTTTTTTAAACAGGTTACA+TGG | + | chr5.3:729192-729211 | MS.gene024909:intron | 25.0% |
!!! | TGATCGTCTTGTTTTTAAAA+CGG | + | chr5.3:729328-729347 | MS.gene024909:CDS | 25.0% |
AATTGATGAAATGGATACGT+AGG | + | chr5.3:726793-726812 | MS.gene024909:intron | 30.0% | |
ACTTACAGTGATACGAAATA+AGG | - | chr5.3:729920-729939 | None:intergenic | 30.0% | |
ATGAAGTTAATAGATACAGG+GGG | + | chr5.3:727695-727714 | MS.gene024909:CDS | 30.0% | |
GAGATGAAGTTAATAGATAC+AGG | + | chr5.3:727692-727711 | MS.gene024909:CDS | 30.0% | |
GATGAAGTTAATAGATACAG+GGG | + | chr5.3:727694-727713 | MS.gene024909:CDS | 30.0% | |
GTTTACAGTATCTCACAAAA+TGG | - | chr5.3:728911-728930 | None:intergenic | 30.0% | |
TCAGCAACAAATTGATGAAA+TGG | + | chr5.3:726784-726803 | MS.gene024909:CDS | 30.0% | |
! | AATAACATGAGTGCTATTGT+TGG | - | chr5.3:728061-728080 | None:intergenic | 30.0% |
! | AATACATGAAGTATTTCCCA+AGG | + | chr5.3:728316-728335 | MS.gene024909:CDS | 30.0% |
! | AATATACTTTTCTTTCCCTC+CGG | - | chr5.3:729476-729495 | None:intergenic | 30.0% |
! | AATTAAATGCTTCTTTTCGG+CGG | + | chr5.3:727577-727596 | MS.gene024909:intron | 30.0% |
! | AGCAATAAAACTAAGAGTAC+TGG | - | chr5.3:730034-730053 | None:intergenic | 30.0% |
! | ATACATGAAGTATTTCCCAA+GGG | + | chr5.3:728317-728336 | MS.gene024909:CDS | 30.0% |
! | CAATGGTCAAATATGTTTTG+CGG | + | chr5.3:728656-728675 | MS.gene024909:CDS | 30.0% |
! | TAATAAGGCTTAGAAAGTGT+TGG | - | chr5.3:728467-728486 | None:intergenic | 30.0% |
!! | AAATGTAGAAGTTGATGATC+AGG | + | chr5.3:729220-729239 | MS.gene024909:CDS | 30.0% |
AATCTCAGTGACATAATTGG+TGG | - | chr5.3:728283-728302 | None:intergenic | 35.0% | |
ACAATGCATGAAATCCTGAA+TGG | + | chr5.3:730575-730594 | MS.gene024909:CDS | 35.0% | |
AGGTGCAAAACTAAAATCTC+AGG | - | chr5.3:730067-730086 | None:intergenic | 35.0% | |
ATCTCAGTGACATAATTGGT+GGG | - | chr5.3:728282-728301 | None:intergenic | 35.0% | |
ATCTGGAAAAATAGCGAATC+CGG | - | chr5.3:730633-730652 | None:intergenic | 35.0% | |
ATGAGGATATCTACAAGATC+AGG | - | chr5.3:728414-728433 | None:intergenic | 35.0% | |
ATTAGTACTTACCACTTGCA+AGG | - | chr5.3:728747-728766 | None:intergenic | 35.0% | |
ATTTCAAATGGTCGTGATTC+TGG | + | chr5.3:729883-729902 | MS.gene024909:CDS | 35.0% | |
CAATCATAATATTGCGGTTG+CGG | - | chr5.3:727383-727402 | None:intergenic | 35.0% | |
GAAAATCGTAACAAACGATG+AGG | - | chr5.3:727829-727848 | None:intergenic | 35.0% | |
GAGAATCTCAGTGACATAAT+TGG | - | chr5.3:728286-728305 | None:intergenic | 35.0% | |
GATGACTAAATAGTCTGTTG+CGG | + | chr5.3:727257-727276 | MS.gene024909:intron | 35.0% | |
GCATAACATGAAACTGCATT+AGG | - | chr5.3:727283-727302 | None:intergenic | 35.0% | |
GCATTAAACACGTCATTCAT+GGG | - | chr5.3:730155-730174 | None:intergenic | 35.0% | |
GGTGCAAAACTAAAATCTCA+GGG | - | chr5.3:730066-730085 | None:intergenic | 35.0% | |
GTATATTGAATCTTGCGGAA+AGG | + | chr5.3:729489-729508 | MS.gene024909:CDS | 35.0% | |
GTGCAAATAACAATGATCCA+GGG | - | chr5.3:730012-730031 | None:intergenic | 35.0% | |
TATGTCACTGAGATTCTCAA+TGG | + | chr5.3:728288-728307 | MS.gene024909:CDS | 35.0% | |
TGAAGTTAATAGATACAGGG+GGG | + | chr5.3:727696-727715 | MS.gene024909:CDS | 35.0% | |
TGATCTTGTAGATATCCTCA+TGG | + | chr5.3:728413-728432 | MS.gene024909:CDS | 35.0% | |
TGTTGCATTTAACAGATGCA+AGG | - | chr5.3:728970-728989 | None:intergenic | 35.0% | |
TTAGCGTGACTGATATTAAC+TGG | + | chr5.3:730107-730126 | MS.gene024909:intron | 35.0% | |
TTCAGGATTTCATGCATTGT+AGG | - | chr5.3:730575-730594 | None:intergenic | 35.0% | |
TTGATTCTATTCCACATGCA+AGG | + | chr5.3:730732-730751 | MS.gene024909:CDS | 35.0% | |
TTTACATTGCACTTCAATGG+CGG | + | chr5.3:727335-727354 | MS.gene024909:intron | 35.0% | |
! | AGAATTGCACTGATGTAACT+GGG | + | chr5.3:730519-730538 | MS.gene024909:CDS | 35.0% |
! | GAATTGGCTCACATTTCAAA+TGG | + | chr5.3:729871-729890 | MS.gene024909:CDS | 35.0% |
!! | AACCAAAACTTGATTTGCGT+TGG | - | chr5.3:726995-727014 | None:intergenic | 35.0% |
!! | ACCAAAACTTGATTTGCGTT+GGG | - | chr5.3:726994-727013 | None:intergenic | 35.0% |
!! | GCTAGCTTTAGTACAAGTAT+TGG | + | chr5.3:729518-729537 | MS.gene024909:CDS | 35.0% |
!! | GTTAATTCTGGACTTGCTTT+TGG | + | chr5.3:729269-729288 | MS.gene024909:CDS | 35.0% |
!! | TAAACTGACATAGTCTTGTG+AGG | - | chr5.3:730090-730109 | None:intergenic | 35.0% |
!! | TAAGTGCTGCTACTTCTTTT+TGG | + | chr5.3:729657-729676 | MS.gene024909:CDS | 35.0% |
!! | TTTTAGGTGAAGGTGAAATG+TGG | - | chr5.3:729092-729111 | None:intergenic | 35.0% |
!!! | ACAAAATGGTTTTGACGAGT+AGG | - | chr5.3:728897-728916 | None:intergenic | 35.0% |
!!! | GATTCGCTATTTTTCCAGAT+GGG | + | chr5.3:730633-730652 | MS.gene024909:CDS | 35.0% |
!!! | TCAAGTTTTGGTTTCAGAAC+AGG | + | chr5.3:727002-727021 | MS.gene024909:CDS | 35.0% |
AAAAAAACCGCCAGCTTGAA+AGG | + | chr5.3:727980-727999 | MS.gene024909:intron | 40.0% | |
AAAACTGCAGTGATGCCTAA+TGG | + | chr5.3:730815-730834 | MS.gene024909:CDS | 40.0% | |
AAAACTTGGACCAAACCATC+CGG | + | chr5.3:728504-728523 | MS.gene024909:intron | 40.0% | |
AAATTCAGAGCAGAGTGATG+TGG | + | chr5.3:730484-730503 | MS.gene024909:CDS | 40.0% | |
AACTGCATCCAGATGGAATA+TGG | + | chr5.3:728928-728947 | MS.gene024909:CDS | 40.0% | |
AAGACCCTTAATCTGTACTG+AGG | - | chr5.3:728169-728188 | None:intergenic | 40.0% | |
AAGACCTTAGTGAGACCATT+TGG | - | chr5.3:729068-729087 | None:intergenic | 40.0% | |
AAGTATTTCCCAAGGGCTAA+TGG | + | chr5.3:728324-728343 | MS.gene024909:CDS | 40.0% | |
AATTGGTATAGTATCAGGGG+CGG | + | chr5.3:729953-729972 | MS.gene024909:intron | 40.0% | |
ACAACCAACGTTCCAGAAAA+AGG | + | chr5.3:726744-726763 | MS.gene024909:CDS | 40.0% | |
ACACTTGAAGTCCTTTCAAC+TGG | + | chr5.3:728698-728717 | MS.gene024909:CDS | 40.0% | |
ACATCGGGATTAAAGCTTGA+GGG | + | chr5.3:728354-728373 | MS.gene024909:CDS | 40.0% | |
ACTGCATCCAGATGGAATAT+GGG | + | chr5.3:728929-728948 | MS.gene024909:CDS | 40.0% | |
AGAAAATCAAACACCCTCCT+TGG | - | chr5.3:729695-729714 | None:intergenic | 40.0% | |
AGACCTTAGTGAGACCATTT+GGG | - | chr5.3:729067-729086 | None:intergenic | 40.0% | |
AGCATTAATCATGACCACCA+CGG | - | chr5.3:728391-728410 | None:intergenic | 40.0% | |
AGCTCCTCAGTACAGATTAA+GGG | + | chr5.3:728162-728181 | MS.gene024909:CDS | 40.0% | |
AGGGTCTTAATGAGAAGCAA+AGG | + | chr5.3:728181-728200 | MS.gene024909:CDS | 40.0% | |
ATGCATGAAATCCTGAATGG+CGG | + | chr5.3:730578-730597 | MS.gene024909:CDS | 40.0% | |
ATTATGAATGTCGGATCTGG+AGG | + | chr5.3:730677-730696 | MS.gene024909:CDS | 40.0% | |
ATTGAATCTTGCGGAAAGGT+TGG | + | chr5.3:729493-729512 | MS.gene024909:CDS | 40.0% | |
CAATTCATGAACTATACCGC+CGG | - | chr5.3:729857-729876 | None:intergenic | 40.0% | |
CCAATTATGAATGTCGGATC+TGG | + | chr5.3:730674-730693 | MS.gene024909:CDS | 40.0% | |
CCACTGTTAACACTTTGATC+AGG | + | chr5.3:730774-730793 | MS.gene024909:CDS | 40.0% | |
CCAGATCCGACATTCATAAT+TGG | - | chr5.3:730677-730696 | None:intergenic | 40.0% | |
CTCTTCTCTGAGCATCATTA+GGG | - | chr5.3:726946-726965 | None:intergenic | 40.0% | |
GAATGCTCTCTTAAGGAAAG+AGG | + | chr5.3:727801-727820 | MS.gene024909:CDS | 40.0% | |
GATGGGTGTATAACAAATGC+AGG | + | chr5.3:730650-730669 | MS.gene024909:CDS | 40.0% | |
GCAAGTCCAGAATTAACTAG+AGG | - | chr5.3:729266-729285 | None:intergenic | 40.0% | |
GCAGGACCAATTATGAATGT+CGG | + | chr5.3:730668-730687 | MS.gene024909:CDS | 40.0% | |
GGCATTAAACACGTCATTCA+TGG | - | chr5.3:730156-730175 | None:intergenic | 40.0% | |
GGTGCAAATAACAATGATCC+AGG | - | chr5.3:730013-730032 | None:intergenic | 40.0% | |
GTCTCAATCAAACAACCAGA+GGG | - | chr5.3:729041-729060 | None:intergenic | 40.0% | |
GTTCTTCTACAACACATGCT+TGG | + | chr5.3:729540-729559 | MS.gene024909:CDS | 40.0% | |
TACAACACATGCTTGGACAA+AGG | + | chr5.3:729547-729566 | MS.gene024909:CDS | 40.0% | |
TACTGTAAACTGCATCCAGA+TGG | + | chr5.3:728921-728940 | MS.gene024909:CDS | 40.0% | |
TAGCTCCTCAGTACAGATTA+AGG | + | chr5.3:728161-728180 | MS.gene024909:CDS | 40.0% | |
TATATACCATGATGTTCCCG+TGG | - | chr5.3:729365-729384 | None:intergenic | 40.0% | |
TCTCTTCTCTGAGCATCATT+AGG | - | chr5.3:726947-726966 | None:intergenic | 40.0% | |
TGCATTGTAGGTATTTGCAC+AGG | - | chr5.3:730563-730582 | None:intergenic | 40.0% | |
TGTAGATATCCTCATGGATG+TGG | + | chr5.3:728419-728438 | MS.gene024909:CDS | 40.0% | |
TGTCTCAATCAAACAACCAG+AGG | - | chr5.3:729042-729061 | None:intergenic | 40.0% | |
TTATGAATGTCGGATCTGGA+GGG | + | chr5.3:730678-730697 | MS.gene024909:CDS | 40.0% | |
TTGATTGAGACACTCCCAAA+TGG | + | chr5.3:729050-729069 | MS.gene024909:CDS | 40.0% | |
TTGGTTCAACCTGATTGAAC+CGG | - | chr5.3:728526-728545 | None:intergenic | 40.0% | |
TTTGACGAGTAGGAACATGT+GGG | - | chr5.3:728887-728906 | None:intergenic | 40.0% | |
! | AAGCTTTAATCCCGATGTGT+TGG | - | chr5.3:728352-728371 | None:intergenic | 40.0% |
! | ACCCAACGCAAATCAAGTTT+TGG | + | chr5.3:726990-727009 | MS.gene024909:CDS | 40.0% |
! | AGCTTTAATCCCGATGTGTT+GGG | - | chr5.3:728351-728370 | None:intergenic | 40.0% |
! | ATGTACAGTGAGATTGACTC+CGG | + | chr5.3:729454-729473 | MS.gene024909:intron | 40.0% |
! | CCTGATCAAAGTGTTAACAG+TGG | - | chr5.3:730777-730796 | None:intergenic | 40.0% |
! | GAGAATTGCACTGATGTAAC+TGG | + | chr5.3:730518-730537 | MS.gene024909:CDS | 40.0% |
! | TTTTGACGAGTAGGAACATG+TGG | - | chr5.3:728888-728907 | None:intergenic | 40.0% |
!! | ATTGTAGAGCTTGCTGTTGT+TGG | + | chr5.3:728204-728223 | MS.gene024909:CDS | 40.0% |
!! | CATCAATTTGTTGCTGAGTG+TGG | - | chr5.3:726781-726800 | None:intergenic | 40.0% |
!! | GCATTTGTTATACACCCATC+TGG | - | chr5.3:730650-730669 | None:intergenic | 40.0% |
!! | GCTCTGAATTTTCACTCTAC+AGG | - | chr5.3:730475-730494 | None:intergenic | 40.0% |
!! | TGTAGAAGTTGATGATCAGG+TGG | + | chr5.3:729223-729242 | MS.gene024909:CDS | 40.0% |
!!! | ATTTCACGCTCTGCTGATTT+TGG | + | chr5.3:728078-728097 | MS.gene024909:CDS | 40.0% |
!!! | GGATTCGCTATTTTTCCAGA+TGG | + | chr5.3:730632-730651 | MS.gene024909:CDS | 40.0% |
AAATCAAACACCCTCCTTGG+AGG | - | chr5.3:729692-729711 | None:intergenic | 45.0% | |
AATGACTCACCACATCCATG+AGG | - | chr5.3:728431-728450 | None:intergenic | 45.0% | |
AATGGCTGAACTGACCAAAC+TGG | + | chr5.3:728227-728246 | MS.gene024909:CDS | 45.0% | |
AATTGGTGGGAAGCCAAAGA+GGG | - | chr5.3:728269-728288 | None:intergenic | 45.0% | |
ACCAAACTGGCTAGGACATA+TGG | + | chr5.3:728240-728259 | MS.gene024909:CDS | 45.0% | |
ACTCCCAAATGGTCTCACTA+AGG | + | chr5.3:729061-729080 | MS.gene024909:CDS | 45.0% | |
ACTTCCACATACGTTGCATG+TGG | - | chr5.3:727731-727750 | None:intergenic | 45.0% | |
AGCACTTAGCACAACACTGA+CGG | - | chr5.3:729645-729664 | None:intergenic | 45.0% | |
CACAACGACAGCAATATGCA+TGG | - | chr5.3:727099-727118 | None:intergenic | 45.0% | |
CACATCGGGATTAAAGCTTG+AGG | + | chr5.3:728353-728372 | MS.gene024909:CDS | 45.0% | |
CACCCATAAACCTTTCAAGC+TGG | - | chr5.3:727993-728012 | None:intergenic | 45.0% | |
CACTGAGATTCTCAATGGAG+AGG | + | chr5.3:728293-728312 | MS.gene024909:CDS | 45.0% | |
CACTTTGATCAGGAACACTG+TGG | + | chr5.3:730784-730803 | MS.gene024909:CDS | 45.0% | |
CATGCATATTGCTGTCGTTG+TGG | + | chr5.3:727097-727116 | MS.gene024909:intron | 45.0% | |
CCATAAACCTTTCAAGCTGG+CGG | - | chr5.3:727990-728009 | None:intergenic | 45.0% | |
CGCCAGCTTGAAAGGTTTAT+GGG | + | chr5.3:727988-728007 | MS.gene024909:intron | 45.0% | |
CGGCGGTATAGTTCATGAAT+TGG | + | chr5.3:729855-729874 | MS.gene024909:CDS | 45.0% | |
CTCTGAGCATCATTAGGGTT+AGG | - | chr5.3:726941-726960 | None:intergenic | 45.0% | |
GAAGTCCTTTCAACTGGAGT+GGG | + | chr5.3:728704-728723 | MS.gene024909:CDS | 45.0% | |
GACAGCAATATGCATGGCAA+CGG | - | chr5.3:727093-727112 | None:intergenic | 45.0% | |
GACTGGAGAATGCTCTCTTA+AGG | + | chr5.3:727794-727813 | MS.gene024909:CDS | 45.0% | |
GCAATGTTTGTAACCGCATC+AGG | - | chr5.3:727361-727380 | None:intergenic | 45.0% | |
GGAAAAATAGCGAATCCGGA+AGG | - | chr5.3:730629-730648 | None:intergenic | 45.0% | |
GTCATGACCATTACAACCTC+CGG | - | chr5.3:729587-729606 | None:intergenic | 45.0% | |
GTTACCACATGCAACGTATG+TGG | + | chr5.3:727724-727743 | MS.gene024909:CDS | 45.0% | |
TAATTGGTGGGAAGCCAAAG+AGG | - | chr5.3:728270-728289 | None:intergenic | 45.0% | |
TACTATACAGTGGCGTATCC+AGG | - | chr5.3:730399-730418 | None:intergenic | 45.0% | |
TCCAGATGGAATATGGGTAG+TGG | + | chr5.3:728935-728954 | MS.gene024909:CDS | 45.0% | |
TCCATATGTCCTAGCCAGTT+TGG | - | chr5.3:728244-728263 | None:intergenic | 45.0% | |
TGAAGTCCTTTCAACTGGAG+TGG | + | chr5.3:728703-728722 | MS.gene024909:CDS | 45.0% | |
TGATCAGGAACACTGTGGAA+AGG | + | chr5.3:730789-730808 | MS.gene024909:CDS | 45.0% | |
TTCAACCTGATTGAACCGGA+TGG | - | chr5.3:728522-728541 | None:intergenic | 45.0% | |
TTGACGAGTAGGAACATGTG+GGG | - | chr5.3:728886-728905 | None:intergenic | 45.0% | |
! | TGGAACGTTGGTTGTGTTGT+TGG | - | chr5.3:726739-726758 | None:intergenic | 45.0% |
!! | ACTGACATAGTCTTGTGAGG+AGG | - | chr5.3:730087-730106 | None:intergenic | 45.0% |
!! | AGAGCTTGCTGTTGTTGGAA+TGG | + | chr5.3:728209-728228 | MS.gene024909:CDS | 45.0% |
!! | CAATTTGTTGCTGAGTGTGG+CGG | - | chr5.3:726778-726797 | None:intergenic | 45.0% |
!! | TGGACAAAGGTACCTGGAAA+CGG | + | chr5.3:729560-729579 | MS.gene024909:CDS | 45.0% |
!!! | AGGTCCTTTTTCTGGAACGT+TGG | - | chr5.3:726751-726770 | None:intergenic | 45.0% |
!!! | TCTGCTGATTTTGGAGTTGC+TGG | + | chr5.3:728087-728106 | MS.gene024909:CDS | 45.0% |
!!! | TGCTTTTGGAGCTAAACGCT+GGG | + | chr5.3:729283-729302 | MS.gene024909:CDS | 45.0% |
!!! | TTGCTTTTGGAGCTAAACGC+TGG | + | chr5.3:729282-729301 | MS.gene024909:CDS | 45.0% |
!! | AACAAATTTAATAATATAAA+TGG | - | chr5.3:728628-728647 | None:intergenic | 5.0% |
!!! | ACTATTATTAATATTATTTT+AGG | - | chr5.3:729108-729127 | None:intergenic | 5.0% |
!!! | TAACTAATTATATTTTATAT+AGG | + | chr5.3:727615-727634 | MS.gene024909:intron | 5.0% |
AAACGGACCGGAGGTTGTAA+TGG | + | chr5.3:729577-729596 | MS.gene024909:CDS | 50.0% | |
AACAATGATCCAGGGTGTGC+AGG | - | chr5.3:730004-730023 | None:intergenic | 50.0% | |
AACGTTCCACGGGAACATCA+TGG | + | chr5.3:729356-729375 | MS.gene024909:CDS | 50.0% | |
ACAACCAGAGGGTCTTCTGT+TGG | - | chr5.3:729030-729049 | None:intergenic | 50.0% | |
AGAACCAACAGAAGACCCTC+TGG | + | chr5.3:729023-729042 | MS.gene024909:CDS | 50.0% | |
AGAGAAGAGAGCTGAGCCTT+CGG | + | chr5.3:726957-726976 | MS.gene024909:CDS | 50.0% | |
ATATTGGCACGAGAGTCTGC+AGG | - | chr5.3:728030-728049 | None:intergenic | 50.0% | |
ATGATGTTCCCGTGGAACGT+TGG | - | chr5.3:729357-729376 | None:intergenic | 50.0% | |
ATTGGTGGGAAGCCAAAGAG+GGG | - | chr5.3:728268-728287 | None:intergenic | 50.0% | |
CCAAACCATCCGGTTCAATC+AGG | + | chr5.3:728514-728533 | MS.gene024909:intron | 50.0% | |
CCGCCAGCTTGAAAGGTTTA+TGG | + | chr5.3:727987-728006 | MS.gene024909:intron | 50.0% | |
CCTGATTGAACCGGATGGTT+TGG | - | chr5.3:728517-728536 | None:intergenic | 50.0% | |
CGTCTTACTCTGCTTCCTTC+CGG | + | chr5.3:730611-730630 | MS.gene024909:CDS | 50.0% | |
CTGAACTGACCAAACTGGCT+AGG | + | chr5.3:728232-728251 | MS.gene024909:CDS | 50.0% | |
GCACTTAGCACAACACTGAC+GGG | - | chr5.3:729644-729663 | None:intergenic | 50.0% | |
GCCACTACCCATATTCCATC+TGG | - | chr5.3:728939-728958 | None:intergenic | 50.0% | |
GCTAATGGTCCCAACACATC+GGG | + | chr5.3:728339-728358 | MS.gene024909:CDS | 50.0% | |
GGAGTTGCTGGTGGTAACAA+TGG | + | chr5.3:728099-728118 | MS.gene024909:CDS | 50.0% | |
GGCTAATGGTCCCAACACAT+CGG | + | chr5.3:728338-728357 | MS.gene024909:CDS | 50.0% | |
GTAGGAGAGGCTTTCACTGT+TGG | + | chr5.3:728138-728157 | MS.gene024909:CDS | 50.0% | |
GTCATGTGACATTTCCCCAG+CGG | - | chr5.3:727761-727780 | None:intergenic | 50.0% | |
TACCTCCCACTCCAGTTGAA+AGG | - | chr5.3:728712-728731 | None:intergenic | 50.0% | |
TGAAAGCCTCTCCTACCATG+CGG | - | chr5.3:728134-728153 | None:intergenic | 50.0% | |
TGACGATCAGCAGCTAAGAC+TGG | + | chr5.3:727777-727796 | MS.gene024909:CDS | 50.0% | |
TGAGGGTTCGAAAGAATCCG+TGG | + | chr5.3:728371-728390 | MS.gene024909:CDS | 50.0% | |
TGTTGGGACCATTAGCCCTT+GGG | - | chr5.3:728335-728354 | None:intergenic | 50.0% | |
TTCATGAACTATACCGCCGG+CGG | - | chr5.3:729854-729873 | None:intergenic | 50.0% | |
! | AATTTTGCACCCCCTGACTC+AGG | + | chr5.3:730371-730390 | MS.gene024909:intron | 50.0% |
! | ACAGTGAGATTGACTCCGGA+GGG | + | chr5.3:729458-729477 | MS.gene024909:intron | 50.0% |
! | ATTTTGCACCCCCTGACTCA+GGG | + | chr5.3:730372-730391 | MS.gene024909:intron | 50.0% |
! | TACAGTGAGATTGACTCCGG+AGG | + | chr5.3:729457-729476 | MS.gene024909:intron | 50.0% |
! | TTTGGCTTCCAGTTCCTCCA+AGG | + | chr5.3:729675-729694 | MS.gene024909:CDS | 50.0% |
!! | AAAGGTACCTGGAAACGGAC+CGG | + | chr5.3:729565-729584 | MS.gene024909:CDS | 50.0% |
!! | CATGCTTGGACAAAGGTACC+TGG | + | chr5.3:729554-729573 | MS.gene024909:CDS | 50.0% |
!!! | GCTGATTTTGGAGTTGCTGG+TGG | + | chr5.3:728090-728109 | MS.gene024909:CDS | 50.0% |
AAACGGCCACCAACGTTCCA+CGG | + | chr5.3:729345-729364 | MS.gene024909:CDS | 55.0% | |
AACACCCTCCTTGGAGGAAC+TGG | - | chr5.3:729686-729705 | None:intergenic | 55.0% | |
ACGAGTAGGAACATGTGGGG+AGG | - | chr5.3:728883-728902 | None:intergenic | 55.0% | |
ACTTCAATGGCGGCCTGATG+CGG | + | chr5.3:727345-727364 | MS.gene024909:intron | 55.0% | |
ATGTTCCCGTGGAACGTTGG+TGG | - | chr5.3:729354-729373 | None:intergenic | 55.0% | |
CAGTGGGATATTCTCTCCGC+CGG | + | chr5.3:729835-729854 | MS.gene024909:intron | 55.0% | |
CGAGAGTCTGCAGGATCTGT+TGG | - | chr5.3:728021-728040 | None:intergenic | 55.0% | |
CGAGTAGGAACATGTGGGGA+GGG | - | chr5.3:728882-728901 | None:intergenic | 55.0% | |
CTACGATGGAGCCTTGCAAG+TGG | + | chr5.3:728733-728752 | MS.gene024909:CDS | 55.0% | |
GAGTAGGAACATGTGGGGAG+GGG | - | chr5.3:728881-728900 | None:intergenic | 55.0% | |
GCGGATCCAGCTATGCTTGA+GGG | + | chr5.3:729972-729991 | MS.gene024909:intron | 55.0% | |
GCTTCCAGTTCCTCCAAGGA+GGG | + | chr5.3:729679-729698 | MS.gene024909:CDS | 55.0% | |
GGACATATGGACCCCCTCTT+TGG | + | chr5.3:728253-728272 | MS.gene024909:CDS | 55.0% | |
GGAGTGGGAGGTAACTACGA+TGG | + | chr5.3:728719-728738 | MS.gene024909:CDS | 55.0% | |
GGGTTCGAAAGAATCCGTGG+TGG | + | chr5.3:728374-728393 | MS.gene024909:CDS | 55.0% | |
GTATCCAGGACCCTGAGTCA+GGG | - | chr5.3:730385-730404 | None:intergenic | 55.0% | |
GTCCTTTCAACTGGAGTGGG+AGG | + | chr5.3:728707-728726 | MS.gene024909:CDS | 55.0% | |
GTGGAAGTTCCACTACCGCT+GGG | + | chr5.3:727743-727762 | MS.gene024909:CDS | 55.0% | |
GTGTTGGGACCATTAGCCCT+TGG | - | chr5.3:728336-728355 | None:intergenic | 55.0% | |
TATCCAGGACCCTGAGTCAG+GGG | - | chr5.3:730384-730403 | None:intergenic | 55.0% | |
TGACATTTCCCCAGCGGTAG+TGG | - | chr5.3:727755-727774 | None:intergenic | 55.0% | |
TGCACACCCTCAAGCATAGC+TGG | - | chr5.3:729981-730000 | None:intergenic | 55.0% | |
TGGAAGTTCCACTACCGCTG+GGG | + | chr5.3:727744-727763 | MS.gene024909:CDS | 55.0% | |
TGTGGAAGTTCCACTACCGC+TGG | + | chr5.3:727742-727761 | MS.gene024909:CDS | 55.0% | |
TTGGGTCTAACCCAGTCCGA+AGG | - | chr5.3:726976-726995 | None:intergenic | 55.0% | |
TTGGTGGGAAGCCAAAGAGG+GGG | - | chr5.3:728267-728286 | None:intergenic | 55.0% | |
! | CCACATGCAAGGCTAGCTCT+GGG | + | chr5.3:730743-730762 | MS.gene024909:CDS | 55.0% |
! | GCGGCGATAGGTCCTTTTTC+TGG | - | chr5.3:726759-726778 | None:intergenic | 55.0% |
! | TCCACATGCAAGGCTAGCTC+TGG | + | chr5.3:730742-730761 | MS.gene024909:CDS | 55.0% |
AACGGCCACCAACGTTCCAC+GGG | + | chr5.3:729346-729365 | MS.gene024909:CDS | 60.0% | |
AAGCCTCTCCTACCATGCGG+TGG | - | chr5.3:728131-728150 | None:intergenic | 60.0% | |
ACAACCTCCGGTCCGTTTCC+AGG | - | chr5.3:729575-729594 | None:intergenic | 60.0% | |
ACACCACCGCATGGTAGGAG+AGG | + | chr5.3:728125-728144 | MS.gene024909:CDS | 60.0% | |
AGAGAGCTGAGCCTTCGGAC+TGG | + | chr5.3:726962-726981 | MS.gene024909:CDS | 60.0% | |
ATCCAGGACCCTGAGTCAGG+GGG | - | chr5.3:730383-730402 | None:intergenic | 60.0% | |
CAATGGAGCACACCACCGCA+TGG | + | chr5.3:728116-728135 | MS.gene024909:CDS | 60.0% | |
CGTATCCAGGACCCTGAGTC+AGG | - | chr5.3:730386-730405 | None:intergenic | 60.0% | |
GAACAGGCGCACTTCGCTGA+AGG | + | chr5.3:727018-727037 | MS.gene024909:CDS | 60.0% | |
GACTTGAGTCGCCGCCATTC+AGG | - | chr5.3:730592-730611 | None:intergenic | 60.0% | |
GAGAGCTGAGCCTTCGGACT+GGG | + | chr5.3:726963-726982 | MS.gene024909:CDS | 60.0% | |
GGCGGATCCAGCTATGCTTG+AGG | + | chr5.3:729971-729990 | MS.gene024909:intron | 60.0% | |
GGCTTCCAGTTCCTCCAAGG+AGG | + | chr5.3:729678-729697 | MS.gene024909:CDS | 60.0% | |
TGGGATATTCTCTCCGCCGG+CGG | + | chr5.3:729838-729857 | MS.gene024909:CDS | 60.0% | |
TTGCTGAGTGTGGCGGCGAT+AGG | - | chr5.3:726771-726790 | None:intergenic | 60.0% | |
!! | CCCAGAGCTAGCCTTGCATG+TGG | - | chr5.3:730746-730765 | None:intergenic | 60.0% |
GGAGCACACCACCGCATGGT+AGG | + | chr5.3:728120-728139 | MS.gene024909:CDS | 65.0% | |
GGTACCTGGAAACGGACCGG+AGG | + | chr5.3:729568-729587 | MS.gene024909:CDS | 65.0% | |
CACCCCCTGACTCAGGGTCC+TGG | + | chr5.3:730378-730397 | MS.gene024909:intron | 70.0% | |
GGGTGTGCACCTGCACACCC+TGG | + | chr5.3:729992-730011 | MS.gene024909:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.3 | gene | 726713 | 730844 | 726713 | ID=MS.gene024909 |
chr5.3 | mRNA | 726713 | 730844 | 726713 | ID=MS.gene024909.t1;Parent=MS.gene024909 |
chr5.3 | exon | 726713 | 726810 | 726713 | ID=MS.gene024909.t1.exon1;Parent=MS.gene024909.t1 |
chr5.3 | CDS | 726713 | 726810 | 726713 | ID=cds.MS.gene024909.t1;Parent=MS.gene024909.t1 |
chr5.3 | exon | 726922 | 727039 | 726922 | ID=MS.gene024909.t1.exon2;Parent=MS.gene024909.t1 |
chr5.3 | CDS | 726922 | 727039 | 726922 | ID=cds.MS.gene024909.t1;Parent=MS.gene024909.t1 |
chr5.3 | exon | 727637 | 727822 | 727637 | ID=MS.gene024909.t1.exon3;Parent=MS.gene024909.t1 |
chr5.3 | CDS | 727637 | 727822 | 727637 | ID=cds.MS.gene024909.t1;Parent=MS.gene024909.t1 |
chr5.3 | exon | 727994 | 728440 | 727994 | ID=MS.gene024909.t1.exon4;Parent=MS.gene024909.t1 |
chr5.3 | CDS | 727994 | 728440 | 727994 | ID=cds.MS.gene024909.t1;Parent=MS.gene024909.t1 |
chr5.3 | exon | 728653 | 728754 | 728653 | ID=MS.gene024909.t1.exon5;Parent=MS.gene024909.t1 |
chr5.3 | CDS | 728653 | 728754 | 728653 | ID=cds.MS.gene024909.t1;Parent=MS.gene024909.t1 |
chr5.3 | exon | 728858 | 729082 | 728858 | ID=MS.gene024909.t1.exon6;Parent=MS.gene024909.t1 |
chr5.3 | CDS | 728858 | 729082 | 728858 | ID=cds.MS.gene024909.t1;Parent=MS.gene024909.t1 |
chr5.3 | exon | 729206 | 729377 | 729206 | ID=MS.gene024909.t1.exon7;Parent=MS.gene024909.t1 |
chr5.3 | CDS | 729206 | 729377 | 729206 | ID=cds.MS.gene024909.t1;Parent=MS.gene024909.t1 |
chr5.3 | exon | 729462 | 729739 | 729462 | ID=MS.gene024909.t1.exon8;Parent=MS.gene024909.t1 |
chr5.3 | CDS | 729462 | 729739 | 729462 | ID=cds.MS.gene024909.t1;Parent=MS.gene024909.t1 |
chr5.3 | exon | 729838 | 729933 | 729838 | ID=MS.gene024909.t1.exon9;Parent=MS.gene024909.t1 |
chr5.3 | CDS | 729838 | 729933 | 729838 | ID=cds.MS.gene024909.t1;Parent=MS.gene024909.t1 |
chr5.3 | exon | 730479 | 730844 | 730479 | ID=MS.gene024909.t1.exon10;Parent=MS.gene024909.t1 |
chr5.3 | CDS | 730479 | 730844 | 730479 | ID=cds.MS.gene024909.t1;Parent=MS.gene024909.t1 |
Gene Sequence |
Protein sequence |