Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025012.t1 | XP_013443735.1 | 97.9 | 337 | 7 | 0 | 1 | 337 | 1 | 337 | 5.40E-180 | 640.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025012.t1 | Q6AWY6 | 44.1 | 349 | 142 | 10 | 21 | 333 | 49 | 380 | 2.7e-63 | 243.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025012.t1 | A0A072TW62 | 97.9 | 337 | 7 | 0 | 1 | 337 | 1 | 337 | 3.9e-180 | 640.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene025012.t1 | TF | GRF |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025012.t1 | MTR_0001s0490 | 98.220 | 337 | 6 | 0 | 1 | 337 | 1 | 337 | 0.0 | 686 |
| MS.gene025012.t1 | MTR_4g125490 | 39.516 | 372 | 158 | 14 | 17 | 331 | 1 | 362 | 3.34e-60 | 199 |
| MS.gene025012.t1 | MTR_2g041430 | 40.496 | 363 | 151 | 14 | 25 | 336 | 7 | 355 | 1.54e-58 | 192 |
| MS.gene025012.t1 | MTR_2g041430 | 40.385 | 364 | 152 | 14 | 25 | 337 | 7 | 356 | 3.16e-58 | 192 |
| MS.gene025012.t1 | MTR_2g041430 | 40.331 | 362 | 151 | 14 | 25 | 335 | 7 | 354 | 1.34e-57 | 190 |
| MS.gene025012.t1 | MTR_8g020560 | 68.908 | 119 | 35 | 2 | 16 | 132 | 1 | 119 | 4.00e-49 | 168 |
| MS.gene025012.t1 | MTR_5g027030 | 70.370 | 108 | 21 | 3 | 25 | 132 | 16 | 112 | 5.80e-47 | 162 |
| MS.gene025012.t1 | MTR_7g104050 | 61.607 | 112 | 40 | 3 | 26 | 135 | 79 | 189 | 4.93e-39 | 142 |
| MS.gene025012.t1 | MTR_7g104050 | 61.607 | 112 | 40 | 3 | 26 | 135 | 79 | 189 | 5.83e-39 | 142 |
| MS.gene025012.t1 | MTR_1g017490 | 56.034 | 116 | 46 | 2 | 25 | 135 | 11 | 126 | 9.14e-37 | 139 |
| MS.gene025012.t1 | MTR_1g017490 | 56.034 | 116 | 46 | 2 | 25 | 135 | 144 | 259 | 1.10e-36 | 140 |
| MS.gene025012.t1 | MTR_3g092330 | 48.462 | 130 | 49 | 3 | 12 | 141 | 101 | 212 | 1.01e-30 | 122 |
| MS.gene025012.t1 | MTR_8g035910 | 41.611 | 149 | 69 | 3 | 14 | 161 | 38 | 169 | 1.07e-24 | 103 |
| MS.gene025012.t1 | MTR_8g035910 | 42.105 | 76 | 39 | 1 | 79 | 149 | 288 | 363 | 1.16e-12 | 68.9 |
| MS.gene025012.t1 | MTR_8g035640 | 64.103 | 39 | 14 | 0 | 88 | 126 | 51 | 89 | 3.51e-12 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025012.t1 | AT3G13960 | 64.220 | 109 | 38 | 1 | 25 | 132 | 16 | 124 | 1.18e-43 | 155 |
| MS.gene025012.t1 | AT2G36400 | 57.143 | 119 | 47 | 2 | 26 | 140 | 77 | 195 | 3.33e-41 | 148 |
| MS.gene025012.t1 | AT4G37740 | 52.055 | 146 | 47 | 5 | 25 | 155 | 164 | 301 | 1.30e-39 | 147 |
| MS.gene025012.t1 | AT2G06200 | 48.235 | 170 | 71 | 4 | 25 | 182 | 6 | 170 | 9.83e-39 | 138 |
| MS.gene025012.t1 | AT2G06200 | 48.235 | 170 | 71 | 4 | 25 | 182 | 45 | 209 | 1.57e-38 | 138 |
| MS.gene025012.t1 | AT3G52910 | 56.250 | 112 | 44 | 2 | 26 | 132 | 83 | 194 | 3.44e-37 | 137 |
| MS.gene025012.t1 | AT5G53660 | 39.634 | 164 | 71 | 3 | 11 | 174 | 49 | 184 | 8.46e-29 | 114 |
| MS.gene025012.t1 | AT4G24150 | 41.912 | 136 | 62 | 2 | 9 | 133 | 95 | 224 | 6.17e-26 | 107 |
| MS.gene025012.t1 | AT4G24150 | 44.275 | 131 | 66 | 3 | 9 | 133 | 133 | 262 | 1.16e-25 | 107 |
| MS.gene025012.t1 | AT4G24150 | 36.129 | 155 | 69 | 2 | 9 | 133 | 133 | 287 | 9.60e-24 | 102 |
| MS.gene025012.t1 | AT2G06200 | 51.000 | 100 | 42 | 2 | 85 | 182 | 4 | 98 | 1.45e-23 | 95.9 |
| MS.gene025012.t1 | AT2G45480 | 50.980 | 102 | 49 | 1 | 29 | 129 | 28 | 129 | 1.58e-20 | 90.9 |
| MS.gene025012.t1 | AT2G45480 | 50.980 | 102 | 49 | 1 | 29 | 129 | 26 | 127 | 6.41e-20 | 90.5 |
| MS.gene025012.t1 | AT2G45480 | 50.000 | 66 | 31 | 2 | 83 | 148 | 299 | 362 | 3.63e-13 | 70.5 |
| MS.gene025012.t1 | AT2G45480 | 50.980 | 102 | 49 | 1 | 29 | 129 | 28 | 129 | 6.43e-20 | 90.5 |
| MS.gene025012.t1 | AT2G45480 | 50.000 | 66 | 31 | 2 | 83 | 148 | 301 | 364 | 3.51e-13 | 70.5 |
Find 91 sgRNAs with CRISPR-Local
Find 225 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTTTGATCTTTAAATATA+TGG | 0.195661 | 4.3:-56442903 | MS.gene025012:CDS |
| CTTAGGCCATTCGCTGAAAA+AGG | 0.223874 | 4.3:+56439916 | None:intergenic |
| CGCTCACAGTACTTGGAGTC+TGG | 0.273319 | 4.3:+56441823 | None:intergenic |
| GTCCACCTTCTTCCCATAAA+AGG | 0.288851 | 4.3:+56441909 | None:intergenic |
| CAATACCTGTATTCTTTACT+TGG | 0.293844 | 4.3:+56441577 | None:intergenic |
| ATCTTTAAATATATGGTTGC+TGG | 0.294888 | 4.3:-56442896 | MS.gene025012:CDS |
| AGTTACTTACAGGTAGGAAT+AGG | 0.318313 | 4.3:+56442794 | None:intergenic |
| AGCTTCTTTGCAGAAGCTTC+AGG | 0.320264 | 4.3:-56440139 | MS.gene025012:CDS |
| TTTCCAGCTGTGACTCCATT+TGG | 0.337205 | 4.3:+56440098 | None:intergenic |
| TCAGTCCTCCTACATCTTCC+TGG | 0.350789 | 4.3:+56441880 | None:intergenic |
| GCCTGTGGAATCACAAACTA+TGG | 0.360463 | 4.3:-56441767 | MS.gene025012:CDS |
| GTTCAAAATACTACAGGTTC+TGG | 0.363646 | 4.3:-56441646 | MS.gene025012:CDS |
| CTCCTACATCTTCCTGGCTC+CGG | 0.374741 | 4.3:+56441886 | None:intergenic |
| AAGAAGGTGGACCCGGAGCC+AGG | 0.384375 | 4.3:-56441898 | MS.gene025012:CDS |
| GAGTGAAAACTGGAATGAAT+AGG | 0.396151 | 4.3:+56442845 | None:intergenic |
| CAGGCTTTCTTGAACGGTTG+CGG | 0.396165 | 4.3:+56441785 | None:intergenic |
| CAGAGAGTCATGGTCTGGTT+TGG | 0.398433 | 4.3:-56439891 | MS.gene025012:CDS |
| GGAAGAAAGAGAGTGAAAAC+TGG | 0.406980 | 4.3:+56442835 | None:intergenic |
| AGGACAAGATCAGGTGGAAC+AGG | 0.419490 | 4.3:+56442869 | None:intergenic |
| CATTTGTTGTGGGAATGTTC+TGG | 0.420078 | 4.3:+56441680 | None:intergenic |
| CATCTTGATACCATTCCCTA+TGG | 0.426022 | 4.3:-56441604 | MS.gene025012:CDS |
| GACCATGACTCTCTGCTCTT+AGG | 0.426877 | 4.3:+56439899 | None:intergenic |
| ATTCCCACAACAAATGCATT+TGG | 0.432493 | 4.3:-56441673 | MS.gene025012:CDS |
| TCCTACATCTTCCTGGCTCC+GGG | 0.435042 | 4.3:+56441887 | None:intergenic |
| AATGGTATCAAGATGATAAT+CGG | 0.435391 | 4.3:+56441612 | None:intergenic |
| CATGTGGCGCTCACAGTACT+TGG | 0.436354 | 4.3:+56441816 | None:intergenic |
| TTATCTAGTGAATATGGATC+TGG | 0.444100 | 4.3:-56439974 | MS.gene025012:CDS |
| GGTAGTGTTCAAAATACTAC+AGG | 0.456240 | 4.3:-56441652 | MS.gene025012:CDS |
| CTACCAAATGCATTTGTTGT+GGG | 0.462866 | 4.3:+56441670 | None:intergenic |
| GCTGGTGGCAGCAGCAGAGC+TGG | 0.465144 | 4.3:-56441709 | MS.gene025012:CDS |
| GCCATAGTTTGTGATTCCAC+AGG | 0.467528 | 4.3:+56441766 | None:intergenic |
| GTTACTTACAGGTAGGAATA+GGG | 0.471074 | 4.3:+56442795 | None:intergenic |
| TGTGGAGAATGCTGTTTGGT+TGG | 0.482035 | 4.3:+56439856 | None:intergenic |
| TTCTTTACTTGGAATCCCAT+AGG | 0.487767 | 4.3:+56441588 | None:intergenic |
| ATTCCACAGGCTTTCTTGAA+CGG | 0.489637 | 4.3:+56441779 | None:intergenic |
| TAATTGAACAGGTATCTTCA+AGG | 0.495908 | 4.3:-56440187 | MS.gene025012:intron |
| AGGGTGGTGAAAGAAGTTAT+TGG | 0.499297 | 4.3:+56442814 | None:intergenic |
| TGAATAGGAAGGACAAGATC+AGG | 0.504204 | 4.3:+56442860 | None:intergenic |
| AGACAACAAGGGTCTCCAAA+TGG | 0.506033 | 4.3:-56440113 | MS.gene025012:CDS |
| TCTCCAAATGGAGTCACAGC+TGG | 0.506829 | 4.3:-56440101 | MS.gene025012:CDS |
| GAGTTGTGGAGAATGCTGTT+TGG | 0.516076 | 4.3:+56439852 | None:intergenic |
| CGGAGGTGTAGGGATGATGA+TGG | 0.523373 | 4.3:-56442981 | MS.gene025012:CDS |
| AGTAGTAACAACGGAGGTGT+AGG | 0.523982 | 4.3:-56442992 | MS.gene025012:CDS |
| GGATTCCAAGTAAAGAATAC+AGG | 0.527798 | 4.3:-56441582 | MS.gene025012:intron |
| TCTTTACTTGGAATCCCATA+GGG | 0.529110 | 4.3:+56441589 | None:intergenic |
| GGAAGATGTAGGAGGACTGA+TGG | 0.529508 | 4.3:-56441877 | MS.gene025012:CDS |
| TTATGGGAAGAAGGTGGACC+CGG | 0.531013 | 4.3:-56441905 | MS.gene025012:CDS |
| TGGAGAAGCTGTGAAGGAAG+AGG | 0.531350 | 4.3:-56439954 | MS.gene025012:CDS |
| AAGAGCAGAGAGTCATGGTC+TGG | 0.532638 | 4.3:-56439896 | MS.gene025012:CDS |
| ACTACCAAATGCATTTGTTG+TGG | 0.537213 | 4.3:+56441669 | None:intergenic |
| CTTCACAGTGTCTCAGTGGC+AGG | 0.545162 | 4.3:-56442939 | MS.gene025012:CDS |
| GGGATAATCACTTTGCAACA+TGG | 0.547856 | 4.3:+56440009 | None:intergenic |
| ACTTGGAATCCCATAGGGAA+TGG | 0.549125 | 4.3:+56441594 | None:intergenic |
| AGCTTCAGGAGGAGACAACA+AGG | 0.549332 | 4.3:-56440125 | MS.gene025012:CDS |
| GAGAAGTCAGACGATGACAT+AGG | 0.553675 | 4.3:+56439812 | None:intergenic |
| GTCAGACGATGACATAGGAA+TGG | 0.557702 | 4.3:+56439817 | None:intergenic |
| GCTCACAGTACTTGGAGTCT+GGG | 0.561352 | 4.3:+56441824 | None:intergenic |
| ATCTTGATACCATTCCCTAT+GGG | 0.573222 | 4.3:-56441603 | MS.gene025012:CDS |
| TCTTCAAGGTCTTAAATCTG+AGG | 0.573656 | 4.3:-56440173 | MS.gene025012:CDS |
| TGGATCTGGAGAAGCTGTGA+AGG | 0.577779 | 4.3:-56439960 | MS.gene025012:CDS |
| GGAGAAGCTGTGAAGGAAGA+GGG | 0.582664 | 4.3:-56439953 | MS.gene025012:CDS |
| GTAGTAACAACGGAGGTGTA+GGG | 0.587459 | 4.3:-56442991 | MS.gene025012:CDS |
| TTCTTTGCAGAAGCTTCAGG+AGG | 0.588543 | 4.3:-56440136 | MS.gene025012:CDS |
| GGATATTGAAAGTTGAGTTG+TGG | 0.598447 | 4.3:+56439838 | None:intergenic |
| GTGACATCGCTAACTGTCGC+TGG | 0.600432 | 4.3:-56441727 | MS.gene025012:CDS |
| CTTCAAGGTCTTAAATCTGA+GGG | 0.600678 | 4.3:-56440172 | MS.gene025012:CDS |
| AAAAGTATGAATAGCTCTGG+TGG | 0.606971 | 4.3:-56443019 | None:intergenic |
| GAAAACTGGAATGAATAGGA+AGG | 0.611240 | 4.3:+56442849 | None:intergenic |
| CACCCTTCACAGTGTCTCAG+TGG | 0.621198 | 4.3:-56442943 | MS.gene025012:CDS |
| GGTTGCGGCCACGATGCATG+TGG | 0.624950 | 4.3:+56441800 | None:intergenic |
| GGCCTAAGAGCAGAGAGTCA+TGG | 0.630587 | 4.3:-56439901 | MS.gene025012:CDS |
| AGTATGAATAGCTCTGGTGG+TGG | 0.634205 | 4.3:-56443016 | MS.gene025012:CDS |
| CAACCGTTCAAGAAAGCCTG+TGG | 0.634486 | 4.3:-56441782 | MS.gene025012:CDS |
| GCAACTCTAGTTGACATCAA+AGG | 0.643622 | 4.3:+56440067 | None:intergenic |
| CGGAGCCAGGAAGATGTAGG+AGG | 0.644072 | 4.3:-56441885 | MS.gene025012:CDS |
| ACCCGGAGCCAGGAAGATGT+AGG | 0.647650 | 4.3:-56441888 | MS.gene025012:CDS |
| TGCCACTGAGACACTGTGAA+GGG | 0.647925 | 4.3:+56442941 | None:intergenic |
| GGAGGTGTAGGGATGATGAT+GGG | 0.651275 | 4.3:-56442980 | MS.gene025012:CDS |
| ACAAGCTCTCAGTCGCCACA+CGG | 0.652578 | 4.3:-56439785 | MS.gene025012:intron |
| ATAGGAAGGACAAGATCAGG+TGG | 0.667033 | 4.3:+56442863 | None:intergenic |
| CTGCCACTGAGACACTGTGA+AGG | 0.667964 | 4.3:+56442940 | None:intergenic |
| ACATCGCTAACTGTCGCTGG+TGG | 0.682168 | 4.3:-56441724 | MS.gene025012:CDS |
| AGTCACAGCTGGAAAACACA+TGG | 0.689809 | 4.3:-56440090 | MS.gene025012:CDS |
| CAAGGTCTTAAATCTGAGGG+TGG | 0.691896 | 4.3:-56440169 | MS.gene025012:CDS |
| GCTTCAGGAGGAGACAACAA+GGG | 0.694886 | 4.3:-56440124 | MS.gene025012:CDS |
| TATCAAGATGATAATCGGCA+CGG | 0.696821 | 4.3:+56441617 | None:intergenic |
| GGTGGTGGCAGTAGTAACAA+CGG | 0.699810 | 4.3:-56443001 | MS.gene025012:CDS |
| ACTTACAGGTAGGAATAGGG+TGG | 0.711937 | 4.3:+56442798 | None:intergenic |
| TGTGAGCGCCACATGCATCG+TGG | 0.717232 | 4.3:-56441808 | MS.gene025012:CDS |
| GACAGTTAGCGATGTCACAG+TGG | 0.746561 | 4.3:+56441732 | None:intergenic |
| GGTGGCAGTAGTAACAACGG+AGG | 0.768714 | 4.3:-56442998 | MS.gene025012:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATAAATAAATAAAAAATT+AGG | + | chr4.3:56440316-56440335 | None:intergenic | 0.0% |
| !! | AAAAAAAATAATAACTTCAT+TGG | + | chr4.3:56440101-56440120 | None:intergenic | 10.0% |
| !!! | TTATATTAAAACAACTTTTT+TGG | - | chr4.3:56441752-56441771 | MS.gene025012:CDS | 10.0% |
| !! | ATAATACTATGTTTATAACA+TGG | - | chr4.3:56441338-56441357 | MS.gene025012:intron | 15.0% |
| !! | GAGATAATAATTTAAGAAAA+TGG | - | chr4.3:56440395-56440414 | MS.gene025012:intron | 15.0% |
| !! | TAATATAAACTTCATATTCT+AGG | + | chr4.3:56441740-56441759 | None:intergenic | 15.0% |
| !!! | TTCTTTTCAATATTGAAAAA+GGG | - | chr4.3:56441473-56441492 | MS.gene025012:intron | 15.0% |
| !!! | TTTCTTTTCAATATTGAAAA+AGG | - | chr4.3:56441472-56441491 | MS.gene025012:intron | 15.0% |
| !!! | TTTTTTGCATTATTCAATTA+TGG | - | chr4.3:56440638-56440657 | MS.gene025012:intron | 15.0% |
| !! | ACTAGATAAAAATGAATGTT+GGG | + | chr4.3:56442722-56442741 | None:intergenic | 20.0% |
| !! | GAAACTAAATGAAAAAACAA+AGG | + | chr4.3:56442258-56442277 | None:intergenic | 20.0% |
| !! | GTGAAATGATATACATAATA+AGG | + | chr4.3:56441160-56441179 | None:intergenic | 20.0% |
| !! | TTCCTTTCAATCAATTTAAT+GGG | - | chr4.3:56442275-56442294 | MS.gene025012:intron | 20.0% |
| !! | TTGAAAAGAAAATTGTAAGA+AGG | + | chr4.3:56441463-56441482 | None:intergenic | 20.0% |
| !! | TTTCCTTTCAATCAATTTAA+TGG | - | chr4.3:56442274-56442293 | MS.gene025012:intron | 20.0% |
| !!! | AGCTTTGATCTTTAAATATA+TGG | - | chr4.3:56439804-56439823 | MS.gene025012:CDS | 20.0% |
| !!! | ATGTCTTCTAATTTTACTTT+CGG | - | chr4.3:56441886-56441905 | MS.gene025012:CDS | 20.0% |
| !!! | TCATTTTTATCTAGTGAATA+TGG | - | chr4.3:56442727-56442746 | MS.gene025012:intron | 20.0% |
| !!! | TGAATATTTCTTATTGATTG+TGG | - | chr4.3:56440694-56440713 | MS.gene025012:intron | 20.0% |
| !!! | TTCTTTAATTTCCAACAAAA+GGG | - | chr4.3:56441925-56441944 | MS.gene025012:intron | 20.0% |
| ! | AAGATACCTGTTCAATTAAA+CGG | + | chr4.3:56442518-56442537 | None:intergenic | 25.0% |
| ! | AATGGTATCAAGATGATAAT+CGG | + | chr4.3:56441098-56441117 | None:intergenic | 25.0% |
| ! | ATCTTTAAATATATGGTTGC+TGG | - | chr4.3:56439811-56439830 | MS.gene025012:CDS | 25.0% |
| ! | CACTAGATAAAAATGAATGT+TGG | + | chr4.3:56442723-56442742 | None:intergenic | 25.0% |
| ! | CTAGATAAAAATGAATGTTG+GGG | + | chr4.3:56442721-56442740 | None:intergenic | 25.0% |
| ! | CTTGTATGATTAAATATGAC+TGG | - | chr4.3:56442422-56442441 | MS.gene025012:intron | 25.0% |
| ! | TCAAAATGTCATTCAAAAAG+TGG | + | chr4.3:56441648-56441667 | None:intergenic | 25.0% |
| ! | TCTAGGAATAAATAAATGCA+TGG | + | chr4.3:56441723-56441742 | None:intergenic | 25.0% |
| ! | TTAGTTAGTTAGTTACTTAC+AGG | + | chr4.3:56439926-56439945 | None:intergenic | 25.0% |
| ! | TTGAATGTAACTACATGTAT+TGG | - | chr4.3:56440424-56440443 | MS.gene025012:intron | 25.0% |
| ! | TTGTTCTCTATATTTGTGTT+GGG | - | chr4.3:56441556-56441575 | MS.gene025012:intron | 25.0% |
| !! | AAAGTTAGTTAGTTGATTCT+TGG | - | chr4.3:56440262-56440281 | MS.gene025012:intron | 25.0% |
| !! | ACTTGTTGATTGCTTTAAAT+TGG | - | chr4.3:56441180-56441199 | MS.gene025012:intron | 25.0% |
| !! | AGTTATTGGTTACTTTCTTT+GGG | - | chr4.3:56441434-56441453 | MS.gene025012:intron | 25.0% |
| !! | CTTCTTTAATTTCCAACAAA+AGG | - | chr4.3:56441924-56441943 | MS.gene025012:CDS | 25.0% |
| !! | CTTTTGTTGGAAATTAAAGA+AGG | + | chr4.3:56441926-56441945 | None:intergenic | 25.0% |
| !! | TGCAAATTTTATTCTTTTCG+TGG | - | chr4.3:56441986-56442005 | MS.gene025012:intron | 25.0% |
| !!! | ATTTTTTGTTCCATTCTCTT+CGG | + | chr4.3:56441219-56441238 | None:intergenic | 25.0% |
| !!! | CATTTTAGCATGTTAATATG+TGG | - | chr4.3:56441798-56441817 | MS.gene025012:CDS | 25.0% |
| AAACTCAACTGCACAATAAT+GGG | + | chr4.3:56441307-56441326 | None:intergenic | 30.0% | |
| AAATCCAAATTGACAGATAG+TGG | + | chr4.3:56440535-56440554 | None:intergenic | 30.0% | |
| AAATTTGCAGCTAGATTTGA+AGG | + | chr4.3:56441975-56441994 | None:intergenic | 30.0% | |
| AATCCAAATTGACAGATAGT+GGG | + | chr4.3:56440534-56440553 | None:intergenic | 30.0% | |
| AATTTAATGGGACCTTGATT+CGG | - | chr4.3:56442287-56442306 | MS.gene025012:intron | 30.0% | |
| ACTTTGGATTAAAGACATGT+CGG | + | chr4.3:56440465-56440484 | None:intergenic | 30.0% | |
| AGATACCTGTTCAATTAAAC+GGG | + | chr4.3:56442517-56442536 | None:intergenic | 30.0% | |
| ATCTATGTCTCTCTCAAAAA+TGG | + | chr4.3:56440564-56440583 | None:intergenic | 30.0% | |
| ATGTCATTCAAAAAGTGGTT+TGG | + | chr4.3:56441643-56441662 | None:intergenic | 30.0% | |
| ATGTCTTTAATCCAAAGTGT+CGG | - | chr4.3:56440467-56440486 | MS.gene025012:intron | 30.0% | |
| CAAACGAAAAATCATGAAGA+TGG | + | chr4.3:56442357-56442376 | None:intergenic | 30.0% | |
| CAACAATTTACACAAAGATG+TGG | + | chr4.3:56441401-56441420 | None:intergenic | 30.0% | |
| CAATACCTGTATTCTTTACT+TGG | + | chr4.3:56441133-56441152 | None:intergenic | 30.0% | |
| CATAGACAAAATAACAGTTG+AGG | + | chr4.3:56441521-56441540 | None:intergenic | 30.0% | |
| CATCAAATATGCAGCTATTA+GGG | + | chr4.3:56440048-56440067 | None:intergenic | 30.0% | |
| CTTGTTCTCTATATTTGTGT+TGG | - | chr4.3:56441555-56441574 | MS.gene025012:intron | 30.0% | |
| GAAAGAATGACAAGAGTTAT+TGG | - | chr4.3:56441420-56441439 | MS.gene025012:intron | 30.0% | |
| GACGTCAGACAAATTTATTT+GGG | - | chr4.3:56442152-56442171 | MS.gene025012:intron | 30.0% | |
| GCAACAAATTATAAGCGAAA+AGG | - | chr4.3:56442447-56442466 | MS.gene025012:intron | 30.0% | |
| GTAAATTTACAAGCACAGTT+AGG | + | chr4.3:56440764-56440783 | None:intergenic | 30.0% | |
| GTCCCATTAAATTGATTGAA+AGG | + | chr4.3:56442280-56442299 | None:intergenic | 30.0% | |
| TAATTGAACAGGTATCTTCA+AGG | - | chr4.3:56442520-56442539 | MS.gene025012:intron | 30.0% | |
| TCATCAAATATGCAGCTATT+AGG | + | chr4.3:56440049-56440068 | None:intergenic | 30.0% | |
| TGACGTCAGACAAATTTATT+TGG | - | chr4.3:56442151-56442170 | MS.gene025012:intron | 30.0% | |
| TGTCATTCAAAAAGTGGTTT+GGG | + | chr4.3:56441642-56441661 | None:intergenic | 30.0% | |
| TTAGTTAGTTACTTACAGGT+AGG | + | chr4.3:56439922-56439941 | None:intergenic | 30.0% | |
| TTATCTAGTGAATATGGATC+TGG | - | chr4.3:56442733-56442752 | MS.gene025012:intron | 30.0% | |
| ! | ATACTTTTAACCGAAGAGAA+TGG | - | chr4.3:56441206-56441225 | MS.gene025012:intron | 30.0% |
| ! | GAGTTATTGGTTACTTTCTT+TGG | - | chr4.3:56441433-56441452 | MS.gene025012:intron | 30.0% |
| ! | TGAGTTACTGTTCCTTTTAT+GGG | - | chr4.3:56440786-56440805 | MS.gene025012:intron | 30.0% |
| ! | TTCGTTTGTAGTATTGAACA+TGG | - | chr4.3:56442369-56442388 | MS.gene025012:intron | 30.0% |
| ! | TTCTTATTGATTGTGGTCTA+GGG | - | chr4.3:56440701-56440720 | MS.gene025012:intron | 30.0% |
| ! | TTTCTTATTGATTGTGGTCT+AGG | - | chr4.3:56440700-56440719 | MS.gene025012:intron | 30.0% |
| !! | ACATTTTGACAAAATTGCGA+GGG | - | chr4.3:56441659-56441678 | MS.gene025012:CDS | 30.0% |
| !! | TGATTTTGATGCAGAAAAAG+AGG | + | chr4.3:56442665-56442684 | None:intergenic | 30.0% |
| !! | TTTTGAGAGAGACATAGATT+TGG | - | chr4.3:56440565-56440584 | MS.gene025012:intron | 30.0% |
| !!! | TCTTTTTTTACTACATGACG+TGG | - | chr4.3:56442472-56442491 | MS.gene025012:intron | 30.0% |
| AGTTACTTACAGGTAGGAAT+AGG | + | chr4.3:56439916-56439935 | None:intergenic | 35.0% | |
| ATAACTTCATTGGATCTCTC+AGG | + | chr4.3:56440091-56440110 | None:intergenic | 35.0% | |
| ATCTGCAACGGTATAATTAC+AGG | + | chr4.3:56443010-56443029 | None:intergenic | 35.0% | |
| ATCTTGATACCATTCCCTAT+GGG | - | chr4.3:56441104-56441123 | MS.gene025012:intron | 35.0% | |
| ATGATGAACTTACCGAATCA+AGG | + | chr4.3:56442302-56442321 | None:intergenic | 35.0% | |
| ATGTGTGTGCAAACAATAGA+GGG | + | chr4.3:56440345-56440364 | None:intergenic | 35.0% | |
| ATTCCCACAACAAATGCATT+TGG | - | chr4.3:56441034-56441053 | MS.gene025012:intron | 35.0% | |
| CTTCAAGGTCTTAAATCTGA+GGG | - | chr4.3:56442535-56442554 | MS.gene025012:intron | 35.0% | |
| GAAAACTGGAATGAATAGGA+AGG | + | chr4.3:56439861-56439880 | None:intergenic | 35.0% | |
| GAAACTCAACTGCACAATAA+TGG | + | chr4.3:56441308-56441327 | None:intergenic | 35.0% | |
| GAGTGAAAACTGGAATGAAT+AGG | + | chr4.3:56439865-56439884 | None:intergenic | 35.0% | |
| GGATTCCAAGTAAAGAATAC+AGG | - | chr4.3:56441125-56441144 | MS.gene025012:intron | 35.0% | |
| GGTAGTGTTCAAAATACTAC+AGG | - | chr4.3:56441055-56441074 | MS.gene025012:intron | 35.0% | |
| GTTACTTACAGGTAGGAATA+GGG | + | chr4.3:56439915-56439934 | None:intergenic | 35.0% | |
| GTTCAAAATACTACAGGTTC+TGG | - | chr4.3:56441061-56441080 | MS.gene025012:intron | 35.0% | |
| TATCAAGATGATAATCGGCA+CGG | + | chr4.3:56441093-56441112 | None:intergenic | 35.0% | |
| TCAAAGAGAGCAACATGATA+TGG | + | chr4.3:56442015-56442034 | None:intergenic | 35.0% | |
| TCTTCAAGGTCTTAAATCTG+AGG | - | chr4.3:56442534-56442553 | MS.gene025012:intron | 35.0% | |
| TCTTTACTTGGAATCCCATA+GGG | + | chr4.3:56441121-56441140 | None:intergenic | 35.0% | |
| TTCAAAGCTTGAACTTCTGA+TGG | - | chr4.3:56442223-56442242 | MS.gene025012:intron | 35.0% | |
| TTCTTTACTTGGAATCCCAT+AGG | + | chr4.3:56441122-56441141 | None:intergenic | 35.0% | |
| TTTCCCACTATCTGTCAATT+TGG | - | chr4.3:56440528-56440547 | MS.gene025012:intron | 35.0% | |
| ! | ACTACCAAATGCATTTGTTG+TGG | + | chr4.3:56441041-56441060 | None:intergenic | 35.0% |
| ! | CGGTGAGATATATTCAAGTT+CGG | - | chr4.3:56442942-56442961 | MS.gene025012:CDS | 35.0% |
| ! | GATTCGGTAAGTTCATCATA+TGG | - | chr4.3:56442303-56442322 | MS.gene025012:intron | 35.0% |
| ! | GGATATTGAAAGTTGAGTTG+TGG | + | chr4.3:56442872-56442891 | None:intergenic | 35.0% |
| ! | GTGAGTTACTGTTCCTTTTA+TGG | - | chr4.3:56440785-56440804 | MS.gene025012:intron | 35.0% |
| !! | CTACCAAATGCATTTGTTGT+GGG | + | chr4.3:56441040-56441059 | None:intergenic | 35.0% |
| !! | CTTGGCTTGTTACTTTAGAA+GGG | - | chr4.3:56440280-56440299 | MS.gene025012:intron | 35.0% |
| !! | GACATTTTGACAAAATTGCG+AGG | - | chr4.3:56441658-56441677 | MS.gene025012:CDS | 35.0% |
| !! | TACATGTATTGGTGTTGTGT+CGG | - | chr4.3:56440435-56440454 | MS.gene025012:intron | 35.0% |
| !! | TCTTGGCTTGTTACTTTAGA+AGG | - | chr4.3:56440279-56440298 | MS.gene025012:intron | 35.0% |
| AAAATTGCGAGGGAGAAAGA+CGG | - | chr4.3:56441669-56441688 | MS.gene025012:CDS | 40.0% | |
| AGGGTGGTGAAAGAAGTTAT+TGG | + | chr4.3:56439896-56439915 | None:intergenic | 40.0% | |
| ATTCCACAGGCTTTCTTGAA+CGG | + | chr4.3:56440931-56440950 | None:intergenic | 40.0% | |
| ATTGGATCTCTCAGGAACAA+AGG | + | chr4.3:56440083-56440102 | None:intergenic | 40.0% | |
| CATCTTGATACCATTCCCTA+TGG | - | chr4.3:56441103-56441122 | MS.gene025012:intron | 40.0% | |
| CATGTGTGTGCAAACAATAG+AGG | + | chr4.3:56440346-56440365 | None:intergenic | 40.0% | |
| CTAATGCTTGTGAATCTCTG+TGG | + | chr4.3:56441376-56441395 | None:intergenic | 40.0% | |
| CTTGAATATATCTCACCGTG+TGG | + | chr4.3:56442940-56442959 | None:intergenic | 40.0% | |
| GCAACTCTAGTTGACATCAA+AGG | + | chr4.3:56442643-56442662 | None:intergenic | 40.0% | |
| GGAAGAAAGAGAGTGAAAAC+TGG | + | chr4.3:56439875-56439894 | None:intergenic | 40.0% | |
| GGGATAATCACTTTGCAACA+TGG | + | chr4.3:56442701-56442720 | None:intergenic | 40.0% | |
| TGAATAGGAAGGACAAGATC+AGG | + | chr4.3:56439850-56439869 | None:intergenic | 40.0% | |
| TTAGGCCATTCGCTGAAAAA+GGG | + | chr4.3:56442793-56442812 | None:intergenic | 40.0% | |
| TTGGATCTCTCAGGAACAAA+GGG | + | chr4.3:56440082-56440101 | None:intergenic | 40.0% | |
| ! | AAAGTGGTTTGGGTGATTCA+TGG | + | chr4.3:56441632-56441651 | None:intergenic | 40.0% |
| ! | AGCATCAAACACCCTTTTGT+TGG | + | chr4.3:56441939-56441958 | None:intergenic | 40.0% |
| ! | CTGTTCCTTTTATGGGAAGA+AGG | - | chr4.3:56440793-56440812 | MS.gene025012:intron | 40.0% |
| ! | TTCCTTTTATGGGAAGAAGG+TGG | - | chr4.3:56440796-56440815 | MS.gene025012:intron | 40.0% |
| !! | AAAAAAGTGGAGGTGCTCTA+AGG | - | chr4.3:56440853-56440872 | MS.gene025012:intron | 40.0% |
| !! | AATGTTTTGCACCGACACTT+TGG | + | chr4.3:56440481-56440500 | None:intergenic | 40.0% |
| !! | CATTTGTTGTGGGAATGTTC+TGG | + | chr4.3:56441030-56441049 | None:intergenic | 40.0% |
| !! | GATTCTCTCTGGAGTCAATT+TGG | + | chr4.3:56440148-56440167 | None:intergenic | 40.0% |
| !! | TCATGGAGATCTACTGATTC+CGG | + | chr4.3:56441615-56441634 | None:intergenic | 40.0% |
| ACTTACAGGTAGGAATAGGG+TGG | + | chr4.3:56439912-56439931 | None:intergenic | 45.0% | |
| ACTTGGAATCCCATAGGGAA+TGG | + | chr4.3:56441116-56441135 | None:intergenic | 45.0% | |
| AGACAACAAGGGTCTCCAAA+TGG | - | chr4.3:56442594-56442613 | MS.gene025012:intron | 45.0% | |
| AGCTTCTTTGCAGAAGCTTC+AGG | - | chr4.3:56442568-56442587 | MS.gene025012:intron | 45.0% | |
| AGTCACAGCTGGAAAACACA+TGG | - | chr4.3:56442617-56442636 | MS.gene025012:intron | 45.0% | |
| ATAGGAAGGACAAGATCAGG+TGG | + | chr4.3:56439847-56439866 | None:intergenic | 45.0% | |
| ATGGGGATAATGAGCAAGGT+AGG | - | chr4.3:56441850-56441869 | MS.gene025012:CDS | 45.0% | |
| CAAGGTCTTAAATCTGAGGG+TGG | - | chr4.3:56442538-56442557 | MS.gene025012:intron | 45.0% | |
| CATTCGATCGTAACCCACTT+GGG | + | chr4.3:56440231-56440250 | None:intergenic | 45.0% | |
| CTTAGGCCATTCGCTGAAAA+AGG | + | chr4.3:56442794-56442813 | None:intergenic | 45.0% | |
| GAGAAGTCAGACGATGACAT+AGG | + | chr4.3:56442898-56442917 | None:intergenic | 45.0% | |
| GAGGGCTAGGTATTAGATAC+CGG | - | chr4.3:56441593-56441612 | MS.gene025012:CDS | 45.0% | |
| GAGTTGTGGAGAATGCTGTT+TGG | + | chr4.3:56442858-56442877 | None:intergenic | 45.0% | |
| GCCTGTGGAATCACAAACTA+TGG | - | chr4.3:56440940-56440959 | MS.gene025012:intron | 45.0% | |
| GGACTGATGGAAAAAAGTGG+AGG | - | chr4.3:56440843-56440862 | MS.gene025012:intron | 45.0% | |
| GGAGGACTGATGGAAAAAAG+TGG | - | chr4.3:56440840-56440859 | MS.gene025012:intron | 45.0% | |
| GTCAGACGATGACATAGGAA+TGG | + | chr4.3:56442893-56442912 | None:intergenic | 45.0% | |
| GTCCACCTTCTTCCCATAAA+AGG | + | chr4.3:56440801-56440820 | None:intergenic | 45.0% | |
| TCACATGGGGATAATGAGCA+AGG | - | chr4.3:56441846-56441865 | MS.gene025012:CDS | 45.0% | |
| TCATTCGATCGTAACCCACT+TGG | + | chr4.3:56440232-56440251 | None:intergenic | 45.0% | |
| TGGATCTCTCAGGAACAAAG+GGG | + | chr4.3:56440081-56440100 | None:intergenic | 45.0% | |
| TTATCCCCATGTGACAGCTA+TGG | + | chr4.3:56441840-56441859 | None:intergenic | 45.0% | |
| TTCTTTGCAGAAGCTTCAGG+AGG | - | chr4.3:56442571-56442590 | MS.gene025012:intron | 45.0% | |
| TTTCCAGCTGTGACTCCATT+TGG | + | chr4.3:56442612-56442631 | None:intergenic | 45.0% | |
| ! | AGTAGTAACAACGGAGGTGT+AGG | - | chr4.3:56439715-56439734 | MS.gene025012:intron | 45.0% |
| ! | CTAGGGTGTGTCTGAAATGT+TGG | - | chr4.3:56440718-56440737 | MS.gene025012:intron | 45.0% |
| ! | GCCATAGTTTGTGATTCCAC+AGG | + | chr4.3:56440944-56440963 | None:intergenic | 45.0% |
| ! | GTAGTAACAACGGAGGTGTA+GGG | - | chr4.3:56439716-56439735 | MS.gene025012:intron | 45.0% |
| ! | TGTGGAGAATGCTGTTTGGT+TGG | + | chr4.3:56442854-56442873 | None:intergenic | 45.0% |
| !!! | TTCGACCCTTTTTCAGCGAA+TGG | - | chr4.3:56442785-56442804 | MS.gene025012:intron | 45.0% |
| AAGAGCAGAGAGTCATGGTC+TGG | - | chr4.3:56442811-56442830 | MS.gene025012:CDS | 50.0% | |
| AGCTTCAGGAGGAGACAACA+AGG | - | chr4.3:56442582-56442601 | MS.gene025012:intron | 50.0% | |
| AGGACAAGATCAGGTGGAAC+AGG | + | chr4.3:56439841-56439860 | None:intergenic | 50.0% | |
| ATACTCCTCCTCAAGGTCTC+AGG | + | chr4.3:56440174-56440193 | None:intergenic | 50.0% | |
| CAACCGTTCAAGAAAGCCTG+TGG | - | chr4.3:56440925-56440944 | MS.gene025012:intron | 50.0% | |
| CAGAGAGTCATGGTCTGGTT+TGG | - | chr4.3:56442816-56442835 | MS.gene025012:CDS | 50.0% | |
| CAGGCTTTCTTGAACGGTTG+CGG | + | chr4.3:56440925-56440944 | None:intergenic | 50.0% | |
| CGTCGCCCGTTTAATTGAAC+AGG | - | chr4.3:56442509-56442528 | MS.gene025012:intron | 50.0% | |
| GAATCGAACCTGAGACCTTG+AGG | - | chr4.3:56440163-56440182 | MS.gene025012:CDS | 50.0% | |
| GACAGTTAGCGATGTCACAG+TGG | + | chr4.3:56440978-56440997 | None:intergenic | 50.0% | |
| GACCATGACTCTCTGCTCTT+AGG | + | chr4.3:56442811-56442830 | None:intergenic | 50.0% | |
| GCTCACAGTACTTGGAGTCT+GGG | + | chr4.3:56440886-56440905 | None:intergenic | 50.0% | |
| GCTTCAGGAGGAGACAACAA+GGG | - | chr4.3:56442583-56442602 | MS.gene025012:intron | 50.0% | |
| GGAAGATGTAGGAGGACTGA+TGG | - | chr4.3:56440830-56440849 | MS.gene025012:intron | 50.0% | |
| GGAGAAGCTGTGAAGGAAGA+GGG | - | chr4.3:56442754-56442773 | MS.gene025012:intron | 50.0% | |
| GTCTCAGGTTCGATTCTCTC+TGG | + | chr4.3:56440159-56440178 | None:intergenic | 50.0% | |
| TCAGTCCTCCTACATCTTCC+TGG | + | chr4.3:56440830-56440849 | None:intergenic | 50.0% | |
| TCGCTGAAAAAGGGTCGAAG+AGG | + | chr4.3:56442784-56442803 | None:intergenic | 50.0% | |
| TCTCCAAATGGAGTCACAGC+TGG | - | chr4.3:56442606-56442625 | MS.gene025012:intron | 50.0% | |
| TGAAAAAGGGTCGAAGAGGC+TGG | + | chr4.3:56442780-56442799 | None:intergenic | 50.0% | |
| TGCCACTGAGACACTGTGAA+GGG | + | chr4.3:56439769-56439788 | None:intergenic | 50.0% | |
| TGGAGAAGCTGTGAAGGAAG+AGG | - | chr4.3:56442753-56442772 | MS.gene025012:intron | 50.0% | |
| TGGATCTGGAGAAGCTGTGA+AGG | - | chr4.3:56442747-56442766 | MS.gene025012:intron | 50.0% | |
| TGGGTGATACTCTGACACGA+GGG | - | chr4.3:56441575-56441594 | MS.gene025012:intron | 50.0% | |
| TTATGGGAAGAAGGTGGACC+CGG | - | chr4.3:56440802-56440821 | MS.gene025012:intron | 50.0% | |
| TTGGGTGATACTCTGACACG+AGG | - | chr4.3:56441574-56441593 | MS.gene025012:intron | 50.0% | |
| ! | GGAGGTGTAGGGATGATGAT+GGG | - | chr4.3:56439727-56439746 | MS.gene025012:intron | 50.0% |
| ! | GGTGGTGGCAGTAGTAACAA+CGG | - | chr4.3:56439706-56439725 | MS.gene025012:intron | 50.0% |
| ! | TGGGAGTATACTCCTCCTCA+AGG | + | chr4.3:56440181-56440200 | None:intergenic | 50.0% |
| ! | TTGAGGAGGAGTATACTCCC+AGG | - | chr4.3:56440180-56440199 | MS.gene025012:intron | 50.0% |
| !! | AGTGGTATTGGCTTGAGACC+TGG | + | chr4.3:56440201-56440220 | None:intergenic | 50.0% |
| !! | GTGGTATTGGCTTGAGACCT+GGG | + | chr4.3:56440200-56440219 | None:intergenic | 50.0% |
| !! | TTGGGTTGGCTCAGTGGTAT+TGG | + | chr4.3:56440213-56440232 | None:intergenic | 50.0% |
| ACAAGCTCTCAGTCGCCACA+CGG | - | chr4.3:56442922-56442941 | MS.gene025012:CDS | 55.0% | |
| ACATCGCTAACTGTCGCTGG+TGG | - | chr4.3:56440983-56441002 | MS.gene025012:intron | 55.0% | |
| ACCACTGAGCCAACCCAAGT+GGG | - | chr4.3:56440215-56440234 | MS.gene025012:intron | 55.0% | |
| AGCCTGCCATAGCTGTCACA+TGG | - | chr4.3:56441831-56441850 | MS.gene025012:CDS | 55.0% | |
| AGCTATGGCAGGCTGACAGA+AGG | + | chr4.3:56441825-56441844 | None:intergenic | 55.0% | |
| CACCCTTCACAGTGTCTCAG+TGG | - | chr4.3:56439764-56439783 | MS.gene025012:intron | 55.0% | |
| CATGTGGCGCTCACAGTACT+TGG | + | chr4.3:56440894-56440913 | None:intergenic | 55.0% | |
| CCTGCCATAGCTGTCACATG+GGG | - | chr4.3:56441833-56441852 | MS.gene025012:CDS | 55.0% | |
| CGATCGTAACCCACTTGGGT+TGG | + | chr4.3:56440227-56440246 | None:intergenic | 55.0% | |
| CGCTCACAGTACTTGGAGTC+TGG | + | chr4.3:56440887-56440906 | None:intergenic | 55.0% | |
| CGGGCGACGAATAACGATGT+TGG | + | chr4.3:56442498-56442517 | None:intergenic | 55.0% | |
| CTCCTACATCTTCCTGGCTC+CGG | + | chr4.3:56440824-56440843 | None:intergenic | 55.0% | |
| CTGCCACTGAGACACTGTGA+AGG | + | chr4.3:56439770-56439789 | None:intergenic | 55.0% | |
| CTTCACAGTGTCTCAGTGGC+AGG | - | chr4.3:56439768-56439787 | MS.gene025012:intron | 55.0% | |
| GATACTCTGACACGAGGGCT+AGG | - | chr4.3:56441580-56441599 | MS.gene025012:intron | 55.0% | |
| GCCTGCCATAGCTGTCACAT+GGG | - | chr4.3:56441832-56441851 | MS.gene025012:CDS | 55.0% | |
| GGCCTAAGAGCAGAGAGTCA+TGG | - | chr4.3:56442806-56442825 | MS.gene025012:CDS | 55.0% | |
| GGTGGCAGTAGTAACAACGG+AGG | - | chr4.3:56439709-56439728 | MS.gene025012:intron | 55.0% | |
| GTGACATCGCTAACTGTCGC+TGG | - | chr4.3:56440980-56440999 | MS.gene025012:intron | 55.0% | |
| TACCACTGAGCCAACCCAAG+TGG | - | chr4.3:56440214-56440233 | MS.gene025012:intron | 55.0% | |
| TCCTACATCTTCCTGGCTCC+GGG | + | chr4.3:56440823-56440842 | None:intergenic | 55.0% | |
| TCGAACCTGAGACCTTGAGG+AGG | - | chr4.3:56440166-56440185 | MS.gene025012:CDS | 55.0% | |
| ! | CGGAGGTGTAGGGATGATGA+TGG | - | chr4.3:56439726-56439745 | MS.gene025012:intron | 55.0% |
| ACCCGGAGCCAGGAAGATGT+AGG | - | chr4.3:56440819-56440838 | MS.gene025012:intron | 60.0% | |
| CCCCATGTGACAGCTATGGC+AGG | + | chr4.3:56441836-56441855 | None:intergenic | 60.0% | |
| CGGAGCCAGGAAGATGTAGG+AGG | - | chr4.3:56440822-56440841 | MS.gene025012:intron | 60.0% | |
| TGTGAGCGCCACATGCATCG+TGG | - | chr4.3:56440899-56440918 | MS.gene025012:intron | 60.0% | |
| !! | ACCCACTTGGGTTGGCTCAG+TGG | + | chr4.3:56440219-56440238 | None:intergenic | 60.0% |
| AAGAAGGTGGACCCGGAGCC+AGG | - | chr4.3:56440809-56440828 | MS.gene025012:intron | 65.0% | |
| GGTTGCGGCCACGATGCATG+TGG | + | chr4.3:56440910-56440929 | None:intergenic | 65.0% | |
| GCTGGTGGCAGCAGCAGAGC+TGG | - | chr4.3:56440998-56441017 | MS.gene025012:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 56439694 | 56443035 | 56439694 | ID=MS.gene025012 |
| chr4.3 | mRNA | 56439694 | 56443035 | 56439694 | ID=MS.gene025012.t1;Parent=MS.gene025012 |
| chr4.3 | exon | 56442804 | 56443035 | 56442804 | ID=MS.gene025012.t1.exon1;Parent=MS.gene025012.t1 |
| chr4.3 | CDS | 56442804 | 56443035 | 56442804 | ID=cds.MS.gene025012.t1;Parent=MS.gene025012.t1 |
| chr4.3 | exon | 56441583 | 56441943 | 56441583 | ID=MS.gene025012.t1.exon2;Parent=MS.gene025012.t1 |
| chr4.3 | CDS | 56441583 | 56441943 | 56441583 | ID=cds.MS.gene025012.t1;Parent=MS.gene025012.t1 |
| chr4.3 | exon | 56439786 | 56440198 | 56439786 | ID=MS.gene025012.t1.exon3;Parent=MS.gene025012.t1 |
| chr4.3 | CDS | 56439786 | 56440198 | 56439786 | ID=cds.MS.gene025012.t1;Parent=MS.gene025012.t1 |
| chr4.3 | exon | 56439694 | 56439701 | 56439694 | ID=MS.gene025012.t1.exon4;Parent=MS.gene025012.t1 |
| chr4.3 | CDS | 56439694 | 56439701 | 56439694 | ID=cds.MS.gene025012.t1;Parent=MS.gene025012.t1 |
| Gene Sequence |
| Protein sequence |
