Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene025183.t1 | XP_024632961.1 | 84.8 | 797 | 93 | 4 | 1 | 769 | 1 | 797 | 0.00E+00 | 1349.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene025183.t1 | Q9SZL8 | 27.5 | 636 | 391 | 13 | 32 | 665 | 70 | 637 | 6.2e-63 | 243.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene025183.t1 | D3YBB9 | 76.6 | 774 | 161 | 4 | 1 | 764 | 49 | 812 | 0.0e+00 | 1189.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene025183.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene025183.t1 | MTR_0558s0020 | 87.500 | 296 | 36 | 1 | 1 | 295 | 1 | 296 | 0.0 | 547 |
MS.gene025183.t1 | MTR_1g083640 | 82.394 | 284 | 34 | 1 | 1 | 268 | 1 | 284 | 2.66e-171 | 494 |
MS.gene025183.t1 | MTR_8g446020 | 73.220 | 295 | 40 | 1 | 1 | 295 | 1 | 256 | 2.32e-151 | 442 |
MS.gene025183.t1 | MTR_6g090505 | 83.544 | 237 | 39 | 0 | 65 | 301 | 1 | 237 | 1.55e-141 | 421 |
MS.gene025183.t1 | MTR_6g090505 | 67.647 | 102 | 6 | 2 | 396 | 495 | 230 | 306 | 3.30e-34 | 135 |
MS.gene025183.t1 | MTR_6g090505 | 77.551 | 49 | 11 | 0 | 567 | 615 | 314 | 362 | 9.76e-12 | 67.8 |
MS.gene025183.t1 | MTR_2g014100 | 81.224 | 245 | 37 | 1 | 1 | 236 | 1 | 245 | 2.78e-140 | 413 |
MS.gene025183.t1 | MTR_0337s0040 | 71.538 | 260 | 34 | 2 | 1 | 259 | 1 | 221 | 7.11e-123 | 367 |
MS.gene025183.t1 | MTR_3g008240 | 83.744 | 203 | 32 | 1 | 1 | 202 | 1 | 203 | 6.20e-117 | 351 |
MS.gene025183.t1 | MTR_4g040430 | 83.168 | 202 | 30 | 1 | 1 | 202 | 1 | 198 | 2.63e-116 | 349 |
MS.gene025183.t1 | MTR_0337s0060 | 59.494 | 316 | 28 | 4 | 447 | 759 | 21 | 239 | 1.29e-110 | 336 |
MS.gene025183.t1 | MTR_5g071590 | 73.333 | 180 | 35 | 2 | 1 | 167 | 1 | 180 | 1.84e-89 | 279 |
MS.gene025183.t1 | MTR_1g055240 | 86.620 | 142 | 19 | 0 | 91 | 232 | 3 | 144 | 9.64e-86 | 268 |
MS.gene025183.t1 | MTR_0019s0290 | 80.921 | 152 | 29 | 0 | 82 | 233 | 9 | 160 | 6.67e-85 | 266 |
MS.gene025183.t1 | MTR_3g028680 | 80.645 | 155 | 27 | 1 | 618 | 769 | 1 | 155 | 9.82e-82 | 259 |
MS.gene025183.t1 | MTR_2g067090 | 78.947 | 152 | 29 | 1 | 621 | 769 | 99 | 250 | 2.86e-74 | 243 |
MS.gene025183.t1 | MTR_4g133495 | 63.736 | 182 | 40 | 2 | 576 | 754 | 88 | 246 | 1.59e-68 | 227 |
MS.gene025183.t1 | MTR_4g133340 | 63.736 | 182 | 40 | 2 | 576 | 754 | 88 | 246 | 1.59e-68 | 227 |
MS.gene025183.t1 | MTR_1281s0010 | 80.734 | 109 | 21 | 0 | 19 | 127 | 1 | 109 | 2.13e-56 | 188 |
MS.gene025183.t1 | MTR_6g051425 | 31.761 | 318 | 186 | 6 | 40 | 341 | 22 | 324 | 2.01e-37 | 143 |
MS.gene025183.t1 | MTR_4g008820 | 70.000 | 100 | 29 | 1 | 1 | 99 | 125 | 224 | 1.59e-31 | 131 |
MS.gene025183.t1 | MTR_8g046060 | 77.273 | 88 | 11 | 2 | 1 | 79 | 91 | 178 | 2.86e-31 | 122 |
MS.gene025183.t1 | MTR_2g067130 | 61.538 | 78 | 24 | 2 | 695 | 769 | 46 | 120 | 6.23e-20 | 87.8 |
MS.gene025183.t1 | MTR_1g070355 | 26.235 | 324 | 218 | 6 | 41 | 362 | 80 | 384 | 5.12e-18 | 88.6 |
MS.gene025183.t1 | MTR_0402s0040 | 25.405 | 185 | 119 | 4 | 49 | 233 | 40 | 205 | 1.39e-13 | 74.3 |
MS.gene025183.t1 | MTR_0337s0050 | 75.000 | 36 | 9 | 0 | 259 | 294 | 14 | 49 | 1.55e-13 | 67.0 |
MS.gene025183.t1 | MTR_4g035820 | 22.414 | 290 | 192 | 7 | 17 | 299 | 61 | 324 | 8.45e-13 | 72.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene025183.t1 | AT4G38180 | 27.769 | 641 | 383 | 14 | 32 | 665 | 70 | 637 | 1.22e-69 | 244 |
MS.gene025183.t1 | AT4G15090 | 24.722 | 720 | 450 | 15 | 50 | 753 | 66 | 709 | 2.15e-59 | 216 |
MS.gene025183.t1 | AT4G15090 | 24.722 | 720 | 450 | 15 | 50 | 753 | 66 | 709 | 2.15e-59 | 216 |
MS.gene025183.t1 | AT4G15090 | 24.722 | 720 | 450 | 15 | 50 | 753 | 66 | 709 | 2.15e-59 | 216 |
MS.gene025183.t1 | AT4G15090 | 24.722 | 720 | 450 | 15 | 50 | 753 | 66 | 709 | 2.15e-59 | 216 |
MS.gene025183.t1 | AT4G15090 | 24.722 | 720 | 450 | 15 | 50 | 753 | 66 | 709 | 2.15e-59 | 216 |
MS.gene025183.t1 | AT2G27110 | 26.466 | 597 | 365 | 15 | 127 | 719 | 108 | 634 | 2.18e-54 | 202 |
MS.gene025183.t1 | AT2G27110 | 26.466 | 597 | 365 | 15 | 127 | 719 | 108 | 634 | 2.18e-54 | 202 |
MS.gene025183.t1 | AT2G27110 | 27.505 | 509 | 312 | 11 | 213 | 719 | 36 | 489 | 4.23e-54 | 199 |
MS.gene025183.t1 | AT3G06250 | 24.367 | 632 | 357 | 15 | 34 | 661 | 189 | 703 | 5.32e-51 | 191 |
MS.gene025183.t1 | AT3G06250 | 24.367 | 632 | 357 | 15 | 34 | 661 | 189 | 703 | 5.32e-51 | 191 |
MS.gene025183.t1 | AT3G06250 | 24.367 | 632 | 357 | 15 | 34 | 661 | 189 | 703 | 5.32e-51 | 191 |
MS.gene025183.t1 | AT1G76320 | 24.963 | 677 | 412 | 19 | 50 | 720 | 12 | 598 | 1.61e-50 | 188 |
MS.gene025183.t1 | AT1G76320 | 24.963 | 677 | 412 | 19 | 50 | 720 | 12 | 598 | 5.43e-50 | 187 |
MS.gene025183.t1 | AT1G76320 | 24.963 | 677 | 412 | 19 | 50 | 720 | 12 | 598 | 5.43e-50 | 187 |
MS.gene025183.t1 | AT1G76320 | 24.963 | 677 | 412 | 19 | 50 | 720 | 12 | 598 | 5.68e-50 | 187 |
MS.gene025183.t1 | AT3G22170 | 23.435 | 687 | 418 | 17 | 34 | 708 | 69 | 659 | 1.81e-49 | 187 |
MS.gene025183.t1 | AT3G22170 | 23.435 | 687 | 418 | 17 | 34 | 708 | 69 | 659 | 1.81e-49 | 187 |
MS.gene025183.t1 | AT5G18960 | 24.575 | 647 | 360 | 18 | 24 | 661 | 200 | 727 | 2.34e-45 | 174 |
MS.gene025183.t1 | AT5G18960 | 24.575 | 647 | 360 | 18 | 24 | 661 | 200 | 727 | 2.34e-45 | 174 |
MS.gene025183.t1 | AT4G38170 | 25.522 | 431 | 263 | 11 | 235 | 662 | 24 | 399 | 8.11e-45 | 169 |
MS.gene025183.t1 | AT1G10240 | 25.559 | 626 | 368 | 21 | 49 | 659 | 62 | 604 | 2.41e-43 | 167 |
MS.gene025183.t1 | AT1G10240 | 25.559 | 626 | 368 | 21 | 49 | 659 | 62 | 604 | 2.41e-43 | 167 |
MS.gene025183.t1 | AT5G28530 | 24.257 | 639 | 387 | 17 | 40 | 660 | 60 | 619 | 3.20e-42 | 164 |
MS.gene025183.t1 | AT2G32250 | 23.427 | 747 | 431 | 23 | 4 | 743 | 10 | 622 | 1.89e-41 | 162 |
MS.gene025183.t1 | AT5G28530 | 24.100 | 639 | 384 | 18 | 40 | 660 | 60 | 615 | 2.70e-41 | 161 |
MS.gene025183.t1 | AT5G28530 | 24.100 | 639 | 384 | 18 | 40 | 660 | 60 | 615 | 2.70e-41 | 161 |
MS.gene025183.t1 | AT2G32250 | 23.427 | 747 | 431 | 23 | 4 | 743 | 10 | 622 | 4.27e-41 | 162 |
MS.gene025183.t1 | AT2G32250 | 23.427 | 747 | 431 | 23 | 4 | 743 | 10 | 622 | 4.27e-41 | 162 |
MS.gene025183.t1 | AT2G32250 | 23.427 | 747 | 431 | 23 | 4 | 743 | 10 | 622 | 4.31e-41 | 162 |
MS.gene025183.t1 | AT2G32250 | 23.427 | 747 | 431 | 23 | 4 | 743 | 10 | 622 | 4.31e-41 | 162 |
MS.gene025183.t1 | AT2G32250 | 23.427 | 747 | 431 | 23 | 4 | 743 | 10 | 622 | 4.31e-41 | 162 |
MS.gene025183.t1 | AT4G19990 | 26.969 | 508 | 311 | 11 | 219 | 721 | 163 | 615 | 4.37e-41 | 161 |
MS.gene025183.t1 | AT4G19990 | 26.969 | 508 | 311 | 11 | 219 | 721 | 106 | 558 | 4.43e-41 | 161 |
MS.gene025183.t1 | AT4G19990 | 26.969 | 508 | 311 | 11 | 219 | 721 | 163 | 615 | 5.00e-41 | 161 |
MS.gene025183.t1 | AT4G19990 | 26.969 | 508 | 311 | 11 | 219 | 721 | 163 | 615 | 5.00e-41 | 161 |
MS.gene025183.t1 | AT4G19990 | 26.969 | 508 | 311 | 11 | 219 | 721 | 163 | 615 | 6.63e-41 | 161 |
MS.gene025183.t1 | AT4G19990 | 26.969 | 508 | 311 | 11 | 219 | 721 | 163 | 615 | 6.63e-41 | 161 |
MS.gene025183.t1 | AT4G19990 | 26.969 | 508 | 311 | 11 | 219 | 721 | 177 | 629 | 7.47e-41 | 161 |
MS.gene025183.t1 | AT2G32250 | 23.380 | 710 | 406 | 21 | 41 | 743 | 3 | 581 | 1.96e-40 | 159 |
MS.gene025183.t1 | AT2G32250 | 23.380 | 710 | 406 | 21 | 41 | 743 | 3 | 581 | 1.97e-40 | 159 |
MS.gene025183.t1 | AT1G80010 | 24.196 | 653 | 372 | 23 | 41 | 662 | 101 | 661 | 3.43e-37 | 149 |
MS.gene025183.t1 | AT1G52520 | 22.311 | 623 | 408 | 15 | 41 | 662 | 91 | 638 | 2.86e-33 | 137 |
MS.gene025183.t1 | AT5G28530 | 21.940 | 629 | 351 | 20 | 40 | 660 | 60 | 556 | 4.51e-23 | 105 |
MS.gene025183.t1 | AT5G28530 | 21.781 | 629 | 348 | 21 | 40 | 660 | 60 | 552 | 2.67e-22 | 102 |
Find 113 sgRNAs with CRISPR-Local
Find 163 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCATGCTGAGTTGGACTTTA+AGG | 0.133287 | 2.4:-49446016 | MS.gene025183:CDS |
TTTCGATGAGTTAACTAATT+TGG | 0.156761 | 2.4:-49446325 | MS.gene025183:CDS |
CTTTAGTCATTTCAACATTA+TGG | 0.194287 | 2.4:-49446058 | MS.gene025183:CDS |
AGTCACTTCTTTGACCTAAT+TGG | 0.197262 | 2.4:+49445190 | None:intergenic |
CAACAAGATTATGCTCTATT+TGG | 0.198611 | 2.4:-49447109 | MS.gene025183:CDS |
TTCATTTCAGCTGCCTTTCT+TGG | 0.201003 | 2.4:-49446606 | MS.gene025183:intron |
TTCTTTGACCTAATTGGATT+TGG | 0.267975 | 2.4:+49445196 | None:intergenic |
CATCGTAAGAGTGTGTTATT+TGG | 0.276792 | 2.4:-49446573 | MS.gene025183:CDS |
TATGGTTTGAGGTTTCTTAT+TGG | 0.280533 | 2.4:+49446479 | None:intergenic |
AATCAGATTTCGACTACAAT+TGG | 0.318540 | 2.4:-49446284 | MS.gene025183:CDS |
GGTTTCGAATGTTGATGTTT+TGG | 0.321472 | 2.4:-49445761 | MS.gene025183:CDS |
TGTTCTTGAGGCAGGGAAAA+AGG | 0.322946 | 2.4:-49445344 | MS.gene025183:CDS |
GCCGATATTTATTGTTTGTT+CGG | 0.341758 | 2.4:+49447059 | None:intergenic |
ACTAGCCTGGTCTGTGTATA+TGG | 0.360230 | 2.4:+49446461 | None:intergenic |
TATGCATTGGTCTTCAGTTT+GGG | 0.370760 | 2.4:-49446184 | MS.gene025183:CDS |
CTCAACGGTGTTCTTGAGGC+AGG | 0.386173 | 2.4:-49445352 | MS.gene025183:CDS |
AACAATAAATATCGGCCATT+AGG | 0.388497 | 2.4:-49447052 | MS.gene025183:intron |
ACCGAACAAACAATAAATAT+CGG | 0.389395 | 2.4:-49447060 | MS.gene025183:CDS |
GTATGCATTGGTCTTCAGTT+TGG | 0.392120 | 2.4:-49446185 | MS.gene025183:CDS |
GTCTTTAGTGCCAACATTCA+TGG | 0.395146 | 2.4:+49445468 | None:intergenic |
TTCTCATACTCAACAAGAAC+TGG | 0.395633 | 2.4:+49447589 | None:intergenic |
AAGAAAGACCAAATCCAATT+AGG | 0.397771 | 2.4:-49445204 | MS.gene025183:CDS |
TTTGGTCTTTCTTTGAACTT+TGG | 0.398856 | 2.4:+49445214 | None:intergenic |
TTCCTTCAAATACTATTATG+AGG | 0.399583 | 2.4:-49445884 | MS.gene025183:CDS |
GAGGAGTTTCTTATTTCTAA+AGG | 0.403538 | 2.4:-49445319 | MS.gene025183:CDS |
TAAAGAATCATGGAAGTCTT+TGG | 0.408500 | 2.4:-49447818 | MS.gene025183:CDS |
CATGTCGTATGTTTGAGAAC+CGG | 0.411671 | 2.4:-49445636 | MS.gene025183:CDS |
GATTATGATCTTCAAACCTT+GGG | 0.413114 | 2.4:+49445713 | None:intergenic |
ATAACACTGGATTCTCTGTT+AGG | 0.417808 | 2.4:-49447747 | MS.gene025183:CDS |
GGGTTGTCACAGTCGACATT+AGG | 0.419786 | 2.4:-49445678 | MS.gene025183:CDS |
CGATTATGATCTTCAAACCT+TGG | 0.425681 | 2.4:+49445712 | None:intergenic |
CGAGAAGTAAATGAAGTTCA+AGG | 0.430014 | 2.4:-49447412 | MS.gene025183:CDS |
AGCTGGAATATATTTGAAGT+TGG | 0.433136 | 2.4:-49447530 | MS.gene025183:CDS |
TGGTCTGTGTATATGGTTTG+AGG | 0.447350 | 2.4:+49446468 | None:intergenic |
GAAAGGGTTGGTTGTAAAGC+TGG | 0.447509 | 2.4:-49447547 | MS.gene025183:CDS |
CGCTTTAAAACATATTGTGC+AGG | 0.447633 | 2.4:+49445535 | None:intergenic |
CGTTATGCTTGTAACAAAGA+AGG | 0.449439 | 2.4:-49447664 | MS.gene025183:CDS |
GCTTTAATAAATTCTAAAGC+TGG | 0.450264 | 2.4:-49447382 | MS.gene025183:CDS |
ATCTGAGAGTGGACAATTGA+CGG | 0.452529 | 2.4:-49447893 | MS.gene025183:CDS |
TGGTCTTTGCTCATGGCACA+TGG | 0.452802 | 2.4:-49446394 | MS.gene025183:CDS |
GGCCTACTTCGGACTTTAAG+TGG | 0.458978 | 2.4:-49446230 | MS.gene025183:CDS |
ATGTCGTATGTTTGAGAACC+GGG | 0.461344 | 2.4:-49445635 | MS.gene025183:CDS |
ACAAAATAAGAAATCGGATA+AGG | 0.469178 | 2.4:-49447698 | MS.gene025183:CDS |
CTCCTCATAATAGTATTTGA+AGG | 0.485089 | 2.4:+49445882 | None:intergenic |
TTACAACCAACCCTTTCCTC+TGG | 0.485330 | 2.4:+49447553 | None:intergenic |
TTTAATTATGCATATAACAC+TGG | 0.485542 | 2.4:-49447760 | MS.gene025183:CDS |
TCTAATGACAACTCGTCAAA+AGG | 0.488137 | 2.4:-49447269 | MS.gene025183:CDS |
CTCAAGTAGCACAAATGCTC+TGG | 0.489977 | 2.4:+49447442 | None:intergenic |
CAATTCACAAAATAAGAAAT+CGG | 0.490263 | 2.4:-49447704 | MS.gene025183:CDS |
TATGAGGAGGACACAACAAA+AGG | 0.490908 | 2.4:-49445868 | MS.gene025183:CDS |
ATGATTGTCAAAACCAAGAA+AGG | 0.491378 | 2.4:+49446593 | None:intergenic |
CTGTCTATGAACCATCTGTT+GGG | 0.491412 | 2.4:-49445243 | MS.gene025183:CDS |
ATCAGATTTCGACTACAATT+GGG | 0.491708 | 2.4:-49446283 | MS.gene025183:CDS |
CGTCAAAAGGAGATGGTGGC+TGG | 0.492100 | 2.4:-49447256 | MS.gene025183:CDS |
ACATTATGGTTCAGAGAATG+AGG | 0.494022 | 2.4:-49446044 | MS.gene025183:CDS |
GACCGCATAAGCTGACTGTT+GGG | 0.496307 | 2.4:+49445964 | None:intergenic |
GAGAACATCTTATGAAGTGA+TGG | 0.499875 | 2.4:-49447350 | MS.gene025183:CDS |
TGTCTTCTGCAGCATCAACT+TGG | 0.502977 | 2.4:+49447164 | None:intergenic |
AAATGCTCTGGTTTATGTAA+TGG | 0.504865 | 2.4:+49447454 | None:intergenic |
CTCATTCAAATCGTATGCAT+TGG | 0.507227 | 2.4:-49446197 | MS.gene025183:CDS |
ATCATAATCGACTTGATGAA+AGG | 0.507955 | 2.4:-49445699 | MS.gene025183:CDS |
TTTAAGTCCGAAAATCGAAA+AGG | 0.508080 | 2.4:+49447298 | None:intergenic |
GAGGGATAATCATGCTGAGT+TGG | 0.508852 | 2.4:-49446025 | MS.gene025183:CDS |
ATTGGTCTTCAGTTTGGGTG+AGG | 0.509410 | 2.4:-49446179 | MS.gene025183:CDS |
TGTCTATAAGATATATAAGT+GGG | 0.514682 | 2.4:-49447494 | MS.gene025183:CDS |
GATCTTCAAACCTTGGGGAA+AGG | 0.519004 | 2.4:+49445719 | None:intergenic |
TAAAGAATCGAACAAGTGAA+TGG | 0.519618 | 2.4:+49446076 | None:intergenic |
GAAGTGATGGGTCAAGGAGT+TGG | 0.522809 | 2.4:-49447337 | MS.gene025183:CDS |
TCATAATCGACTTGATGAAA+GGG | 0.526860 | 2.4:-49445698 | MS.gene025183:CDS |
CATAATAGTATTTGAAGGAA+AGG | 0.529686 | 2.4:+49445887 | None:intergenic |
ACTTCAACAACGCACTAGCC+TGG | 0.534735 | 2.4:+49446448 | None:intergenic |
TAACAAAGAAGGTTTCAAGA+AGG | 0.538422 | 2.4:-49447653 | MS.gene025183:CDS |
AATCGAACAAGTGAATGGTC+TGG | 0.540971 | 2.4:+49446081 | None:intergenic |
ATGAGGAGGACACAACAAAA+GGG | 0.542065 | 2.4:-49445867 | MS.gene025183:CDS |
AACAAAGAAGGTTTCAAGAA+GGG | 0.545537 | 2.4:-49447652 | MS.gene025183:CDS |
CATTTAGTGATAAAGAATCA+TGG | 0.546005 | 2.4:-49447828 | MS.gene025183:CDS |
CTGAAATCCACCATGAATGT+TGG | 0.557140 | 2.4:-49445478 | MS.gene025183:CDS |
AATGAAGCTCTCTCGAAACC+AGG | 0.565261 | 2.4:-49447202 | MS.gene025183:CDS |
TGAAAATTCAGTTATTGATG+CGG | 0.565546 | 2.4:-49447869 | MS.gene025183:CDS |
GCTGTCTATGAACCATCTGT+TGG | 0.568181 | 2.4:-49445244 | MS.gene025183:CDS |
TACACGTGTTTGCGCAGATG+CGG | 0.571672 | 2.4:-49445392 | MS.gene025183:CDS |
ATGTCTATAAGATATATAAG+TGG | 0.572287 | 2.4:-49447495 | MS.gene025183:CDS |
GGACCGCATAAGCTGACTGT+TGG | 0.579264 | 2.4:+49445963 | None:intergenic |
TTTGGTGCAGTCCCAACAGA+TGG | 0.581566 | 2.4:+49445232 | None:intergenic |
TGGTGTATACTTGTTTACTA+CGG | 0.585960 | 2.4:+49445942 | None:intergenic |
ATATTAACTTCATCTGAGAG+TGG | 0.588105 | 2.4:-49447904 | MS.gene025183:CDS |
TCTTATGAAGTGATGGGTCA+AGG | 0.589029 | 2.4:-49447343 | MS.gene025183:CDS |
TCAACGGTGTTCTTGAGGCA+GGG | 0.590097 | 2.4:-49445351 | MS.gene025183:CDS |
ATTTCTCAACGGTGTTCTTG+AGG | 0.591378 | 2.4:-49445356 | MS.gene025183:CDS |
TTGAAGAAAACCTTTCCCCA+AGG | 0.594796 | 2.4:-49445729 | MS.gene025183:CDS |
TGAAGACTTAGAAGGCGTAA+CGG | 0.598405 | 2.4:+49445276 | None:intergenic |
GACAACTCGTCAAAAGGAGA+TGG | 0.599038 | 2.4:-49447263 | MS.gene025183:CDS |
TTGATATCGTTGTGCTTGAG+TGG | 0.601464 | 2.4:+49445444 | None:intergenic |
AGAACATCTTATGAAGTGAT+GGG | 0.601988 | 2.4:-49447349 | MS.gene025183:CDS |
AACTCGTCAAAAGGAGATGG+TGG | 0.603142 | 2.4:-49447260 | MS.gene025183:CDS |
ACGTGTTTGCGCAGATGCGG+AGG | 0.605934 | 2.4:-49445389 | MS.gene025183:CDS |
ATCCCAACAGTCAGCTTATG+CGG | 0.606153 | 2.4:-49445966 | MS.gene025183:CDS |
CTTCAAATACTATTATGAGG+AGG | 0.607664 | 2.4:-49445881 | MS.gene025183:CDS |
AGAACTGGACTGTCACATGT+TGG | 0.620791 | 2.4:+49447604 | None:intergenic |
AGCCACTTAAAGTCCGAAGT+AGG | 0.621799 | 2.4:+49446228 | None:intergenic |
GGGTCAAGGAGTTGGACGCA+CGG | 0.625336 | 2.4:-49447329 | MS.gene025183:CDS |
ATTATGATCTTCAAACCTTG+GGG | 0.630358 | 2.4:+49445714 | None:intergenic |
GGTCTTTGCTCATGGCACAT+GGG | 0.639768 | 2.4:-49446393 | MS.gene025183:CDS |
TTTAGTGCCAACATTCATGG+TGG | 0.641441 | 2.4:+49445471 | None:intergenic |
CATTATGGTTCAGAGAATGA+GGG | 0.643278 | 2.4:-49446043 | MS.gene025183:CDS |
GATTTCAGCTTATCGACAGA+CGG | 0.644926 | 2.4:+49445493 | None:intergenic |
TGAATAAATGAAAAGCAAGA+TGG | 0.655697 | 2.4:+49445922 | None:intergenic |
GCATCTGAAATATTTCTCAA+CGG | 0.661104 | 2.4:-49445367 | MS.gene025183:CDS |
CATGTCGACATAAGAAACCC+CGG | 0.663279 | 2.4:+49445617 | None:intergenic |
TGTTGATAATGATAATGTGA+GGG | 0.666144 | 2.4:-49445782 | MS.gene025183:CDS |
ATGTTGATAATGATAATGTG+AGG | 0.670270 | 2.4:-49445783 | MS.gene025183:CDS |
TGTCGTATGTTTGAGAACCG+GGG | 0.673760 | 2.4:-49445634 | MS.gene025183:CDS |
TCAAACCATATACACAGACC+AGG | 0.683597 | 2.4:-49446466 | MS.gene025183:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATGTCTATAAGATATATAAG+TGG | - | chr2.4:49445610-49445629 | MS.gene025183:CDS | 20.0% |
!! | CAATTCACAAAATAAGAAAT+CGG | - | chr2.4:49445401-49445420 | MS.gene025183:CDS | 20.0% |
!! | TGTCTATAAGATATATAAGT+GGG | - | chr2.4:49445611-49445630 | MS.gene025183:CDS | 20.0% |
!! | TTTAATTATGCATATAACAC+TGG | - | chr2.4:49445345-49445364 | MS.gene025183:CDS | 20.0% |
!!! | AATTTAATGTTCTGGTTTAT+GGG | - | chr2.4:49446228-49446247 | MS.gene025183:CDS | 20.0% |
!!! | ATGATGAAAAACTGTTTTAA+TGG | - | chr2.4:49446850-49446869 | MS.gene025183:intron | 20.0% |
!!! | TGAATGTTTATATTGATTGA+AGG | - | chr2.4:49446200-49446219 | MS.gene025183:CDS | 20.0% |
! | AAAACACCTTGAAAAACATT+CGG | + | chr2.4:49446688-49446707 | None:intergenic | 25.0% |
! | ACAAAATAAGAAATCGGATA+AGG | - | chr2.4:49445407-49445426 | MS.gene025183:CDS | 25.0% |
! | ACCGAACAAACAATAAATAT+CGG | - | chr2.4:49446045-49446064 | MS.gene025183:CDS | 25.0% |
! | AGTACAAAATACTAACCTAA+TGG | + | chr2.4:49446071-49446090 | None:intergenic | 25.0% |
! | CATAATAGTATTTGAAGGAA+AGG | + | chr2.4:49447221-49447240 | None:intergenic | 25.0% |
! | CATTTAGTGATAAAGAATCA+TGG | - | chr2.4:49445277-49445296 | MS.gene025183:CDS | 25.0% |
! | CTTTAGTCATTTCAACATTA+TGG | - | chr2.4:49447047-49447066 | MS.gene025183:intron | 25.0% |
! | TGAAAATTCAGTTATTGATG+CGG | - | chr2.4:49445236-49445255 | MS.gene025183:CDS | 25.0% |
! | TGAAATTTGAATGAATGTTC+TGG | - | chr2.4:49446118-49446137 | MS.gene025183:CDS | 25.0% |
! | TGAATAAATGAAAAGCAAGA+TGG | + | chr2.4:49447186-49447205 | None:intergenic | 25.0% |
! | TTCCTTCAAATACTATTATG+AGG | - | chr2.4:49447221-49447240 | MS.gene025183:CDS | 25.0% |
! | TTTCGATGAGTTAACTAATT+TGG | - | chr2.4:49446780-49446799 | MS.gene025183:intron | 25.0% |
!! | AGGTTTAGAATTTAATGTTC+TGG | - | chr2.4:49446220-49446239 | MS.gene025183:CDS | 25.0% |
!! | TGTTGTATTTTGTTCTGATT+TGG | - | chr2.4:49446476-49446495 | MS.gene025183:CDS | 25.0% |
!!! | ATGTTGATAATGATAATGTG+AGG | - | chr2.4:49447322-49447341 | MS.gene025183:CDS | 25.0% |
!!! | CTTATTTTGTGAATTGTTCT+TGG | + | chr2.4:49445397-49445416 | None:intergenic | 25.0% |
!!! | GAATTTAATGTTCTGGTTTA+TGG | - | chr2.4:49446227-49446246 | MS.gene025183:CDS | 25.0% |
!!! | GCTTTAATAAATTCTAAAGC+TGG | - | chr2.4:49445723-49445742 | MS.gene025183:CDS | 25.0% |
!!! | TGAAAAACTGTTTTAATGGA+AGG | - | chr2.4:49446854-49446873 | MS.gene025183:intron | 25.0% |
!!! | TGTTGATAATGATAATGTGA+GGG | - | chr2.4:49447323-49447342 | MS.gene025183:CDS | 25.0% |
AAACACATATGATCTTTCCA+TGG | + | chr2.4:49446291-49446310 | None:intergenic | 30.0% | |
AACAAAGAAGGTTTCAAGAA+GGG | - | chr2.4:49445453-49445472 | MS.gene025183:CDS | 30.0% | |
AACAATAAATATCGGCCATT+AGG | - | chr2.4:49446053-49446072 | MS.gene025183:CDS | 30.0% | |
AAGAAAGACCAAATCCAATT+AGG | - | chr2.4:49447901-49447920 | MS.gene025183:CDS | 30.0% | |
AATCAGATTTCGACTACAAT+TGG | - | chr2.4:49446821-49446840 | MS.gene025183:intron | 30.0% | |
AGAACATCTTATGAAGTGAT+GGG | - | chr2.4:49445756-49445775 | MS.gene025183:CDS | 30.0% | |
ATATTAACTTCATCTGAGAG+TGG | - | chr2.4:49445201-49445220 | MS.gene025183:CDS | 30.0% | |
ATCAGATTTCGACTACAATT+GGG | - | chr2.4:49446822-49446841 | MS.gene025183:intron | 30.0% | |
ATGATTGTCAAAACCAAGAA+AGG | + | chr2.4:49446515-49446534 | None:intergenic | 30.0% | |
ATTATGATCTTCAAACCTTG+GGG | + | chr2.4:49447394-49447413 | None:intergenic | 30.0% | |
CAACAAGATTATGCTCTATT+TGG | - | chr2.4:49445996-49446015 | MS.gene025183:CDS | 30.0% | |
CTCCTCATAATAGTATTTGA+AGG | + | chr2.4:49447226-49447245 | None:intergenic | 30.0% | |
CTGGTATATGTGTGTTAATT+TGG | - | chr2.4:49446157-49446176 | MS.gene025183:CDS | 30.0% | |
CTTCAAATACTATTATGAGG+AGG | - | chr2.4:49447224-49447243 | MS.gene025183:CDS | 30.0% | |
GAGAATGCAAAGAAAAATCT+CGG | - | chr2.4:49446736-49446755 | MS.gene025183:intron | 30.0% | |
GATTATGATCTTCAAACCTT+GGG | + | chr2.4:49447395-49447414 | None:intergenic | 30.0% | |
GCCGATATTTATTGTTTGTT+CGG | + | chr2.4:49446049-49446068 | None:intergenic | 30.0% | |
TAAAGAAAAACCAGAGGAAA+GGG | - | chr2.4:49445542-49445561 | MS.gene025183:CDS | 30.0% | |
TAAAGAATCATGGAAGTCTT+TGG | - | chr2.4:49445287-49445306 | MS.gene025183:CDS | 30.0% | |
TAAAGAATCGAACAAGTGAA+TGG | + | chr2.4:49447032-49447051 | None:intergenic | 30.0% | |
TAACAAAGAAGGTTTCAAGA+AGG | - | chr2.4:49445452-49445471 | MS.gene025183:CDS | 30.0% | |
TGGATATCATAGTAAAAACC+TGG | + | chr2.4:49445924-49445943 | None:intergenic | 30.0% | |
TGGTGTATACTTGTTTACTA+CGG | + | chr2.4:49447166-49447185 | None:intergenic | 30.0% | |
TTCTTTGACCTAATTGGATT+TGG | + | chr2.4:49447912-49447931 | None:intergenic | 30.0% | |
TTTAAGTCCGAAAATCGAAA+AGG | + | chr2.4:49445810-49445829 | None:intergenic | 30.0% | |
TTTCTATTTACACAGCACAA+TGG | - | chr2.4:49446435-49446454 | MS.gene025183:CDS | 30.0% | |
! | AAATGCTCTGGTTTATGTAA+TGG | + | chr2.4:49445654-49445673 | None:intergenic | 30.0% |
! | AGCTGGAATATATTTGAAGT+TGG | - | chr2.4:49445575-49445594 | MS.gene025183:CDS | 30.0% |
! | CAAAGTTTTCACAATTGAGA+AGG | - | chr2.4:49447281-49447300 | MS.gene025183:CDS | 30.0% |
! | GAATCTTCCTTTTCGATTTT+CGG | - | chr2.4:49445800-49445819 | MS.gene025183:CDS | 30.0% |
! | GCATCTGAAATATTTCTCAA+CGG | - | chr2.4:49447738-49447757 | MS.gene025183:CDS | 30.0% |
! | TATGGTTTGAGGTTTCTTAT+TGG | + | chr2.4:49446629-49446648 | None:intergenic | 30.0% |
! | TCAATTCCGAATGTTTTTCA+AGG | - | chr2.4:49446679-49446698 | MS.gene025183:intron | 30.0% |
! | TTTGGTCTTTCTTTGAACTT+TGG | + | chr2.4:49447894-49447913 | None:intergenic | 30.0% |
!! | ATCATAATCGACTTGATGAA+AGG | - | chr2.4:49447406-49447425 | MS.gene025183:CDS | 30.0% |
!! | ATGTTCTGGTTTAGAATTGA+AGG | - | chr2.4:49446132-49446151 | MS.gene025183:CDS | 30.0% |
!! | GAGGAGTTTCTTATTTCTAA+AGG | - | chr2.4:49447786-49447805 | MS.gene025183:CDS | 30.0% |
!! | TCATAATCGACTTGATGAAA+GGG | - | chr2.4:49447407-49447426 | MS.gene025183:CDS | 30.0% |
!!! | AAGACATAGCCAGTATTTTT+TGG | - | chr2.4:49445958-49445977 | MS.gene025183:CDS | 30.0% |
!!! | ACATGTTTTGAAGATTTTGG+AGG | - | chr2.4:49447506-49447525 | MS.gene025183:CDS | 30.0% |
!!! | AGACATAGCCAGTATTTTTT+GGG | - | chr2.4:49445959-49445978 | MS.gene025183:CDS | 30.0% |
!!! | CTGCACAATATGTTTTAAAG+CGG | - | chr2.4:49447571-49447590 | MS.gene025183:CDS | 30.0% |
!!! | GTTTTTCAAGGTGTTTTTCA+TGG | - | chr2.4:49446691-49446710 | MS.gene025183:intron | 30.0% |
!!! | TCGACATGTTTTGAAGATTT+TGG | - | chr2.4:49447503-49447522 | MS.gene025183:CDS | 30.0% |
ACATTATGGTTCAGAGAATG+AGG | - | chr2.4:49447061-49447080 | MS.gene025183:CDS | 35.0% | |
ATAACACTGGATTCTCTGTT+AGG | - | chr2.4:49445358-49445377 | MS.gene025183:CDS | 35.0% | |
CATAAATTCCAAGGCAAGAT+AGG | + | chr2.4:49446258-49446277 | None:intergenic | 35.0% | |
CATTATGGTTCAGAGAATGA+GGG | - | chr2.4:49447062-49447081 | MS.gene025183:CDS | 35.0% | |
CGAGAAGTAAATGAAGTTCA+AGG | - | chr2.4:49445693-49445712 | MS.gene025183:CDS | 35.0% | |
CGATTATGATCTTCAAACCT+TGG | + | chr2.4:49447396-49447415 | None:intergenic | 35.0% | |
CGTTATGCTTGTAACAAAGA+AGG | - | chr2.4:49445441-49445460 | MS.gene025183:CDS | 35.0% | |
CTAAAGAAAAACCAGAGGAA+AGG | - | chr2.4:49445541-49445560 | MS.gene025183:CDS | 35.0% | |
CTCATTCAAATCGTATGCAT+TGG | - | chr2.4:49446908-49446927 | MS.gene025183:intron | 35.0% | |
GAAAGCTAAAGAAAAACCAG+AGG | - | chr2.4:49445536-49445555 | MS.gene025183:CDS | 35.0% | |
GAGAACATCTTATGAAGTGA+TGG | - | chr2.4:49445755-49445774 | MS.gene025183:CDS | 35.0% | |
GTCTGCTTAATCCTAAAAAC+AGG | - | chr2.4:49445478-49445497 | MS.gene025183:CDS | 35.0% | |
TCTAATGACAACTCGTCAAA+AGG | - | chr2.4:49445836-49445855 | MS.gene025183:CDS | 35.0% | |
TGTACAGAGCATAAATTCCA+AGG | + | chr2.4:49446267-49446286 | None:intergenic | 35.0% | |
TTCTCATACTCAACAAGAAC+TGG | + | chr2.4:49445519-49445538 | None:intergenic | 35.0% | |
! | CATCGTAAGAGTGTGTTATT+TGG | - | chr2.4:49446532-49446551 | MS.gene025183:CDS | 35.0% |
! | GGTTTCGAATGTTGATGTTT+TGG | - | chr2.4:49447344-49447363 | MS.gene025183:CDS | 35.0% |
! | TCTTTCAATGCTTTTCTTCG+TGG | - | chr2.4:49446991-49447010 | MS.gene025183:intron | 35.0% |
! | TGGTTTAGAATTGAAGGTTC+TGG | - | chr2.4:49446138-49446157 | MS.gene025183:CDS | 35.0% |
! | TTTTAATGGAAGGCCTACTT+CGG | - | chr2.4:49446864-49446883 | MS.gene025183:intron | 35.0% |
! | TTTTTCATGGTCTTTGCTCA+TGG | - | chr2.4:49446704-49446723 | MS.gene025183:intron | 35.0% |
!! | ACTGCTTTTGAAGACTTAGA+AGG | + | chr2.4:49447840-49447859 | None:intergenic | 35.0% |
!! | CGCTTTAAAACATATTGTGC+AGG | + | chr2.4:49447573-49447592 | None:intergenic | 35.0% |
!! | TATGCATTGGTCTTCAGTTT+GGG | - | chr2.4:49446921-49446940 | MS.gene025183:intron | 35.0% |
!! | TTGAAGATTTTGGAGGTCTT+AGG | - | chr2.4:49447513-49447532 | MS.gene025183:CDS | 35.0% |
!!! | AGACATCAGCTACTTTTGAT+TGG | - | chr2.4:49446575-49446594 | MS.gene025183:CDS | 35.0% |
!!! | CACAATATGTTTTAAAGCGG+TGG | - | chr2.4:49447574-49447593 | MS.gene025183:CDS | 35.0% |
AATCGAACAAGTGAATGGTC+TGG | + | chr2.4:49447027-49447046 | None:intergenic | 40.0% | |
ACCTATGATCTTTGCATAGC+TGG | + | chr2.4:49446385-49446404 | None:intergenic | 40.0% | |
ATCTGAGAGTGGACAATTGA+CGG | - | chr2.4:49445212-49445231 | MS.gene025183:CDS | 40.0% | |
ATGAGGAGGACACAACAAAA+GGG | - | chr2.4:49447238-49447257 | MS.gene025183:CDS | 40.0% | |
ATGTCGTATGTTTGAGAACC+GGG | - | chr2.4:49447470-49447489 | MS.gene025183:CDS | 40.0% | |
ATTTATGCTCTGTACAGCCA+TGG | - | chr2.4:49446271-49446290 | MS.gene025183:CDS | 40.0% | |
ATTTCTCAACGGTGTTCTTG+AGG | - | chr2.4:49447749-49447768 | MS.gene025183:CDS | 40.0% | |
CATGTCGTATGTTTGAGAAC+CGG | - | chr2.4:49447469-49447488 | MS.gene025183:CDS | 40.0% | |
CTGAAATCCACCATGAATGT+TGG | - | chr2.4:49447627-49447646 | MS.gene025183:CDS | 40.0% | |
CTGTCTATGAACCATCTGTT+GGG | - | chr2.4:49447862-49447881 | MS.gene025183:CDS | 40.0% | |
GATTTCAGCTTATCGACAGA+CGG | + | chr2.4:49447615-49447634 | None:intergenic | 40.0% | |
GTCTTTAGTGCCAACATTCA+TGG | + | chr2.4:49447640-49447659 | None:intergenic | 40.0% | |
TATGAGGAGGACACAACAAA+AGG | - | chr2.4:49447237-49447256 | MS.gene025183:CDS | 40.0% | |
TCAAACCATATACACAGACC+AGG | - | chr2.4:49446639-49446658 | MS.gene025183:intron | 40.0% | |
TCCAGCTATGCAAAGATCAT+AGG | - | chr2.4:49446381-49446400 | MS.gene025183:CDS | 40.0% | |
TCCATCTGCCCAAAAAATAC+TGG | + | chr2.4:49445970-49445989 | None:intergenic | 40.0% | |
TGGTCTGTGTATATGGTTTG+AGG | + | chr2.4:49446640-49446659 | None:intergenic | 40.0% | |
TTCATTTCAGCTGCCTTTCT+TGG | - | chr2.4:49446499-49446518 | MS.gene025183:CDS | 40.0% | |
TTGAAGAAAACCTTTCCCCA+AGG | - | chr2.4:49447376-49447395 | MS.gene025183:CDS | 40.0% | |
TTGATATCGTTGTGCTTGAG+TGG | + | chr2.4:49447664-49447683 | None:intergenic | 40.0% | |
TTTAGTGCCAACATTCATGG+TGG | + | chr2.4:49447637-49447656 | None:intergenic | 40.0% | |
! | TCATGCTGAGTTGGACTTTA+AGG | - | chr2.4:49447089-49447108 | MS.gene025183:CDS | 40.0% |
! | TGAAGACTTAGAAGGCGTAA+CGG | + | chr2.4:49447832-49447851 | None:intergenic | 40.0% |
!! | AAGATTTTGGAGGTCTTAGG+TGG | - | chr2.4:49447516-49447535 | MS.gene025183:CDS | 40.0% |
!! | GTATGCATTGGTCTTCAGTT+TGG | - | chr2.4:49446920-49446939 | MS.gene025183:intron | 40.0% |
!! | TCACATGTTGGCCTGTTTTT+AGG | + | chr2.4:49445492-49445511 | None:intergenic | 40.0% |
!! | TCTTATGAAGTGATGGGTCA+AGG | - | chr2.4:49445762-49445781 | MS.gene025183:CDS | 40.0% |
AACTCGTCAAAAGGAGATGG+TGG | - | chr2.4:49445845-49445864 | MS.gene025183:CDS | 45.0% | |
AATGAAGCTCTCTCGAAACC+AGG | - | chr2.4:49445903-49445922 | MS.gene025183:CDS | 45.0% | |
AGAACTGGACTGTCACATGT+TGG | + | chr2.4:49445504-49445523 | None:intergenic | 45.0% | |
AGCCACTTAAAGTCCGAAGT+AGG | + | chr2.4:49446880-49446899 | None:intergenic | 45.0% | |
ATCCCAACAGTCAGCTTATG+CGG | - | chr2.4:49447139-49447158 | MS.gene025183:CDS | 45.0% | |
CATGTCGACATAAGAAACCC+CGG | + | chr2.4:49447491-49447510 | None:intergenic | 45.0% | |
CTCAAGTAGCACAAATGCTC+TGG | + | chr2.4:49445666-49445685 | None:intergenic | 45.0% | |
GAAAAACCAGAGGAAAGGGT+TGG | - | chr2.4:49445546-49445565 | MS.gene025183:CDS | 45.0% | |
GACAACTCGTCAAAAGGAGA+TGG | - | chr2.4:49445842-49445861 | MS.gene025183:CDS | 45.0% | |
GAGGGATAATCATGCTGAGT+TGG | - | chr2.4:49447080-49447099 | MS.gene025183:CDS | 45.0% | |
GATCTTCAAACCTTGGGGAA+AGG | + | chr2.4:49447389-49447408 | None:intergenic | 45.0% | |
GCTGTCTATGAACCATCTGT+TGG | - | chr2.4:49447861-49447880 | MS.gene025183:CDS | 45.0% | |
TGTCGTATGTTTGAGAACCG+GGG | - | chr2.4:49447471-49447490 | MS.gene025183:CDS | 45.0% | |
TGTCTTCTGCAGCATCAACT+TGG | + | chr2.4:49445944-49445963 | None:intergenic | 45.0% | |
TGTTCTTGAGGCAGGGAAAA+AGG | - | chr2.4:49447761-49447780 | MS.gene025183:CDS | 45.0% | |
TTACAACCAACCCTTTCCTC+TGG | + | chr2.4:49445555-49445574 | None:intergenic | 45.0% | |
! | ACTAGCCTGGTCTGTGTATA+TGG | + | chr2.4:49446647-49446666 | None:intergenic | 45.0% |
! | GTGAGGTCACATTTTACAGC+TGG | - | chr2.4:49446943-49446962 | MS.gene025183:intron | 45.0% |
!! | ATTGGTCTTCAGTTTGGGTG+AGG | - | chr2.4:49446926-49446945 | MS.gene025183:intron | 45.0% |
!! | GAAAGGGTTGGTTGTAAAGC+TGG | - | chr2.4:49445558-49445577 | MS.gene025183:CDS | 45.0% |
!!! | GCCAGTATTTTTTGGGCAGA+TGG | - | chr2.4:49445966-49445985 | MS.gene025183:CDS | 45.0% |
ACTTCAACAACGCACTAGCC+TGG | + | chr2.4:49446660-49446679 | None:intergenic | 50.0% | |
GACCGCATAAGCTGACTGTT+GGG | + | chr2.4:49447144-49447163 | None:intergenic | 50.0% | |
GGCCTACTTCGGACTTTAAG+TGG | - | chr2.4:49446875-49446894 | MS.gene025183:intron | 50.0% | |
GGGTTGTCACAGTCGACATT+AGG | - | chr2.4:49447427-49447446 | MS.gene025183:CDS | 50.0% | |
GGTCTTTGCTCATGGCACAT+GGG | - | chr2.4:49446712-49446731 | MS.gene025183:intron | 50.0% | |
TACACGTGTTTGCGCAGATG+CGG | - | chr2.4:49447713-49447732 | MS.gene025183:CDS | 50.0% | |
TCAACGGTGTTCTTGAGGCA+GGG | - | chr2.4:49447754-49447773 | MS.gene025183:CDS | 50.0% | |
TGGGTGATCCTATCTTGCCT+TGG | - | chr2.4:49446247-49446266 | MS.gene025183:CDS | 50.0% | |
TGGTCTTTGCTCATGGCACA+TGG | - | chr2.4:49446711-49446730 | MS.gene025183:intron | 50.0% | |
! | TTTGGTGCAGTCCCAACAGA+TGG | + | chr2.4:49447876-49447895 | None:intergenic | 50.0% |
!! | GAAGTGATGGGTCAAGGAGT+TGG | - | chr2.4:49445768-49445787 | MS.gene025183:CDS | 50.0% |
CTCAACGGTGTTCTTGAGGC+AGG | - | chr2.4:49447753-49447772 | MS.gene025183:CDS | 55.0% | |
GGACCGCATAAGCTGACTGT+TGG | + | chr2.4:49447145-49447164 | None:intergenic | 55.0% | |
TGAGGCAGGGAAAAAGGCAG+AGG | - | chr2.4:49447767-49447786 | MS.gene025183:CDS | 55.0% | |
! | CGTCAAAAGGAGATGGTGGC+TGG | - | chr2.4:49445849-49445868 | MS.gene025183:CDS | 55.0% |
ACGTGTTTGCGCAGATGCGG+AGG | - | chr2.4:49447716-49447735 | MS.gene025183:CDS | 60.0% | |
GGGTCAAGGAGTTGGACGCA+CGG | - | chr2.4:49445776-49445795 | MS.gene025183:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.4 | gene | 49445192 | 49447935 | 49445192 | ID=MS.gene025183 |
chr2.4 | mRNA | 49445192 | 49447935 | 49445192 | ID=MS.gene025183.t1;Parent=MS.gene025183 |
chr2.4 | exon | 49447053 | 49447935 | 49447053 | ID=MS.gene025183.t1.exon1;Parent=MS.gene025183.t1 |
chr2.4 | CDS | 49447053 | 49447935 | 49447053 | ID=cds.MS.gene025183.t1;Parent=MS.gene025183.t1 |
chr2.4 | exon | 49445192 | 49446618 | 49445192 | ID=MS.gene025183.t1.exon2;Parent=MS.gene025183.t1 |
chr2.4 | CDS | 49445192 | 49446618 | 49445192 | ID=cds.MS.gene025183.t1;Parent=MS.gene025183.t1 |
Gene Sequence |
Protein sequence |