Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025360.t1 | XP_013450559.1 | 87.8 | 377 | 45 | 1 | 4 | 380 | 8 | 383 | 8.80E-174 | 619.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025360.t1 | P92948 | 83.9 | 378 | 59 | 2 | 4 | 380 | 8 | 384 | 1.4e-172 | 607.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025360.t1 | A0A072U615 | 87.8 | 377 | 45 | 1 | 4 | 380 | 8 | 383 | 6.3e-174 | 619.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene025360.t1 | TF | MYB |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025360.t1 | MTR_7g115550 | 94.960 | 377 | 18 | 1 | 4 | 380 | 8 | 383 | 0.0 | 679 |
| MS.gene025360.t1 | MTR_7g115550 | 94.960 | 377 | 18 | 1 | 4 | 380 | 8 | 383 | 0.0 | 671 |
| MS.gene025360.t1 | MTR_5g010470 | 91.927 | 384 | 23 | 3 | 1 | 380 | 1 | 380 | 0.0 | 653 |
| MS.gene025360.t1 | MTR_7g061330 | 38.095 | 105 | 64 | 1 | 4 | 107 | 62 | 166 | 2.22e-15 | 78.2 |
| MS.gene025360.t1 | MTR_7g061330 | 31.008 | 129 | 78 | 2 | 4 | 132 | 114 | 231 | 2.11e-11 | 65.9 |
| MS.gene025360.t1 | MTR_7g461410 | 38.095 | 105 | 64 | 1 | 4 | 107 | 62 | 166 | 2.22e-15 | 78.2 |
| MS.gene025360.t1 | MTR_7g461410 | 31.008 | 129 | 78 | 2 | 4 | 132 | 114 | 231 | 2.11e-11 | 65.9 |
| MS.gene025360.t1 | MTR_7g061330 | 38.095 | 105 | 64 | 1 | 4 | 107 | 26 | 130 | 2.35e-15 | 78.2 |
| MS.gene025360.t1 | MTR_7g061330 | 31.008 | 129 | 78 | 2 | 4 | 132 | 78 | 195 | 2.17e-11 | 65.9 |
| MS.gene025360.t1 | MTR_8g468380 | 34.021 | 97 | 64 | 0 | 3 | 99 | 22 | 118 | 4.22e-13 | 70.9 |
| MS.gene025360.t1 | MTR_3g110028 | 34.286 | 105 | 68 | 1 | 4 | 107 | 34 | 138 | 6.46e-13 | 70.9 |
| MS.gene025360.t1 | MTR_3g110028 | 36.471 | 85 | 54 | 0 | 4 | 88 | 86 | 170 | 1.52e-12 | 69.7 |
| MS.gene025360.t1 | MTR_5g038910 | 33.945 | 109 | 68 | 1 | 3 | 111 | 26 | 130 | 1.05e-12 | 69.7 |
| MS.gene025360.t1 | MTR_1g026870 | 34.343 | 99 | 64 | 1 | 4 | 101 | 34 | 132 | 1.25e-12 | 70.1 |
| MS.gene025360.t1 | MTR_1g026870 | 31.765 | 85 | 58 | 0 | 4 | 88 | 86 | 170 | 8.20e-11 | 64.3 |
| MS.gene025360.t1 | MTR_5g038910 | 33.945 | 109 | 68 | 1 | 3 | 111 | 26 | 130 | 1.52e-12 | 68.9 |
| MS.gene025360.t1 | MTR_7g451170 | 37.647 | 85 | 53 | 0 | 4 | 88 | 192 | 276 | 2.15e-12 | 68.6 |
| MS.gene025360.t1 | MTR_7g035350 | 33.981 | 103 | 65 | 1 | 5 | 104 | 227 | 329 | 5.34e-12 | 67.4 |
| MS.gene025360.t1 | MTR_4g088015 | 35.294 | 85 | 55 | 0 | 4 | 88 | 222 | 306 | 5.53e-12 | 67.4 |
| MS.gene025360.t1 | MTR_6g027340 | 34.783 | 92 | 60 | 0 | 6 | 97 | 19 | 110 | 9.79e-12 | 64.3 |
| MS.gene025360.t1 | MTR_7g037260 | 36.471 | 85 | 54 | 0 | 4 | 88 | 146 | 230 | 1.26e-11 | 65.9 |
| MS.gene025360.t1 | MTR_5g010650 | 37.349 | 83 | 52 | 0 | 6 | 88 | 113 | 195 | 1.91e-11 | 65.9 |
| MS.gene025360.t1 | MTR_4g105660 | 37.647 | 85 | 53 | 0 | 4 | 88 | 181 | 265 | 2.00e-11 | 65.5 |
| MS.gene025360.t1 | MTR_6g027360 | 35.052 | 97 | 63 | 0 | 1 | 97 | 76 | 172 | 2.08e-11 | 64.7 |
| MS.gene025360.t1 | MTR_1g057980 | 32.258 | 93 | 63 | 0 | 4 | 96 | 81 | 173 | 2.97e-11 | 64.3 |
| MS.gene025360.t1 | MTR_6g027370 | 31.959 | 97 | 66 | 0 | 4 | 100 | 100 | 196 | 2.98e-11 | 64.7 |
| MS.gene025360.t1 | MTR_6g074860 | 31.313 | 99 | 68 | 0 | 2 | 100 | 3 | 101 | 4.08e-11 | 63.2 |
| MS.gene025360.t1 | MTR_6g080360 | 34.375 | 96 | 62 | 1 | 6 | 101 | 482 | 576 | 4.91e-11 | 65.1 |
| MS.gene025360.t1 | MTR_6g080360 | 34.375 | 96 | 62 | 1 | 6 | 101 | 262 | 356 | 8.10e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025360.t1 | AT1G09770 | 84.921 | 378 | 55 | 2 | 4 | 380 | 8 | 384 | 0.0 | 630 |
| MS.gene025360.t1 | AT5G02320 | 37.143 | 105 | 65 | 1 | 4 | 107 | 16 | 120 | 7.39e-15 | 76.3 |
| MS.gene025360.t1 | AT5G02320 | 34.118 | 85 | 56 | 0 | 4 | 88 | 68 | 152 | 3.59e-11 | 65.1 |
| MS.gene025360.t1 | AT5G02320 | 37.143 | 105 | 65 | 1 | 4 | 107 | 76 | 180 | 8.45e-15 | 76.3 |
| MS.gene025360.t1 | AT5G02320 | 34.118 | 85 | 56 | 0 | 4 | 88 | 128 | 212 | 3.09e-11 | 65.5 |
| MS.gene025360.t1 | AT5G02320 | 37.143 | 105 | 65 | 1 | 4 | 107 | 76 | 180 | 8.45e-15 | 76.3 |
| MS.gene025360.t1 | AT5G02320 | 34.118 | 85 | 56 | 0 | 4 | 88 | 128 | 212 | 3.09e-11 | 65.5 |
| MS.gene025360.t1 | AT3G18100 | 34.375 | 96 | 63 | 0 | 4 | 99 | 547 | 642 | 3.46e-14 | 74.7 |
| MS.gene025360.t1 | AT3G18100 | 36.082 | 97 | 60 | 2 | 6 | 101 | 498 | 593 | 1.88e-11 | 66.2 |
| MS.gene025360.t1 | AT3G09370 | 36.190 | 105 | 66 | 1 | 4 | 107 | 79 | 183 | 4.42e-14 | 73.9 |
| MS.gene025360.t1 | AT3G09370 | 35.294 | 85 | 55 | 0 | 4 | 88 | 131 | 215 | 6.96e-11 | 64.3 |
| MS.gene025360.t1 | AT3G09370 | 36.190 | 105 | 66 | 1 | 4 | 107 | 84 | 188 | 4.62e-14 | 73.9 |
| MS.gene025360.t1 | AT3G09370 | 35.294 | 85 | 55 | 0 | 4 | 88 | 136 | 220 | 7.08e-11 | 64.3 |
| MS.gene025360.t1 | AT3G18100 | 34.375 | 96 | 63 | 0 | 4 | 99 | 499 | 594 | 4.96e-14 | 74.3 |
| MS.gene025360.t1 | AT3G18100 | 36.082 | 97 | 60 | 2 | 6 | 101 | 450 | 545 | 2.65e-11 | 65.9 |
| MS.gene025360.t1 | AT3G18100 | 34.375 | 96 | 63 | 0 | 4 | 99 | 386 | 481 | 5.30e-14 | 74.3 |
| MS.gene025360.t1 | AT3G18100 | 36.082 | 97 | 60 | 2 | 6 | 101 | 337 | 432 | 2.83e-11 | 65.9 |
| MS.gene025360.t1 | AT3G09370 | 36.190 | 105 | 66 | 1 | 4 | 107 | 92 | 196 | 5.57e-14 | 73.9 |
| MS.gene025360.t1 | AT3G09370 | 35.294 | 85 | 55 | 0 | 4 | 88 | 144 | 228 | 8.11e-11 | 63.9 |
| MS.gene025360.t1 | AT3G18100 | 34.375 | 96 | 63 | 0 | 4 | 99 | 334 | 429 | 6.50e-14 | 73.9 |
| MS.gene025360.t1 | AT3G18100 | 36.082 | 97 | 60 | 2 | 6 | 101 | 285 | 380 | 3.54e-11 | 65.5 |
| MS.gene025360.t1 | AT5G11510 | 37.374 | 99 | 61 | 1 | 4 | 101 | 30 | 128 | 1.03e-13 | 73.6 |
| MS.gene025360.t1 | AT5G11510 | 31.765 | 85 | 58 | 0 | 4 | 88 | 82 | 166 | 6.72e-11 | 64.7 |
| MS.gene025360.t1 | AT5G11510 | 37.374 | 99 | 61 | 1 | 4 | 101 | 30 | 128 | 1.03e-13 | 73.6 |
| MS.gene025360.t1 | AT5G11510 | 31.765 | 85 | 58 | 0 | 4 | 88 | 82 | 166 | 6.72e-11 | 64.7 |
| MS.gene025360.t1 | AT5G11510 | 37.374 | 99 | 61 | 1 | 4 | 101 | 30 | 128 | 1.03e-13 | 73.6 |
| MS.gene025360.t1 | AT5G11510 | 31.765 | 85 | 58 | 0 | 4 | 88 | 82 | 166 | 6.72e-11 | 64.7 |
| MS.gene025360.t1 | AT5G11510 | 37.374 | 99 | 61 | 1 | 4 | 101 | 30 | 128 | 1.67e-13 | 72.8 |
| MS.gene025360.t1 | AT5G11510 | 37.374 | 99 | 61 | 1 | 4 | 101 | 30 | 128 | 1.84e-13 | 72.4 |
| MS.gene025360.t1 | AT4G18770 | 38.824 | 85 | 52 | 0 | 4 | 88 | 218 | 302 | 3.43e-13 | 71.2 |
| MS.gene025360.t1 | AT4G32730 | 35.354 | 99 | 63 | 1 | 4 | 101 | 36 | 134 | 9.81e-13 | 70.5 |
| MS.gene025360.t1 | AT4G32730 | 35.354 | 99 | 63 | 1 | 4 | 101 | 36 | 134 | 9.81e-13 | 70.5 |
| MS.gene025360.t1 | AT4G32730 | 35.354 | 99 | 63 | 1 | 4 | 101 | 36 | 134 | 9.81e-13 | 70.5 |
| MS.gene025360.t1 | AT4G32730 | 35.354 | 99 | 63 | 1 | 4 | 101 | 36 | 134 | 9.81e-13 | 70.5 |
| MS.gene025360.t1 | AT4G33450 | 32.990 | 97 | 65 | 0 | 4 | 100 | 20 | 116 | 1.00e-12 | 68.2 |
| MS.gene025360.t1 | AT4G32730 | 35.354 | 99 | 63 | 1 | 4 | 101 | 36 | 134 | 1.26e-12 | 70.1 |
| MS.gene025360.t1 | AT4G00540 | 37.500 | 112 | 61 | 2 | 4 | 106 | 47 | 158 | 2.96e-12 | 68.2 |
| MS.gene025360.t1 | AT4G00540 | 37.500 | 112 | 61 | 2 | 4 | 106 | 45 | 156 | 3.55e-12 | 68.2 |
| MS.gene025360.t1 | AT5G40360 | 35.294 | 85 | 55 | 0 | 4 | 88 | 159 | 243 | 7.23e-12 | 66.6 |
| MS.gene025360.t1 | AT2G02820 | 30.579 | 121 | 70 | 1 | 3 | 109 | 30 | 150 | 7.67e-12 | 67.0 |
| MS.gene025360.t1 | AT2G02820 | 30.579 | 121 | 70 | 1 | 3 | 109 | 30 | 150 | 1.01e-11 | 66.6 |
| MS.gene025360.t1 | AT2G02820 | 30.579 | 121 | 70 | 1 | 3 | 109 | 30 | 150 | 1.37e-11 | 65.5 |
| MS.gene025360.t1 | AT1G17950 | 31.313 | 99 | 68 | 0 | 2 | 100 | 4 | 102 | 1.53e-11 | 64.7 |
| MS.gene025360.t1 | AT5G17800 | 39.080 | 87 | 53 | 0 | 2 | 88 | 92 | 178 | 1.57e-11 | 65.5 |
| MS.gene025360.t1 | AT1G14350 | 31.959 | 97 | 66 | 0 | 3 | 99 | 25 | 121 | 1.57e-11 | 65.9 |
| MS.gene025360.t1 | AT1G14350 | 31.959 | 97 | 66 | 0 | 3 | 99 | 25 | 121 | 1.57e-11 | 65.9 |
| MS.gene025360.t1 | AT3G27920 | 31.776 | 107 | 68 | 2 | 4 | 107 | 17 | 121 | 2.36e-11 | 63.5 |
| MS.gene025360.t1 | AT4G38620 | 31.655 | 139 | 84 | 5 | 4 | 138 | 15 | 146 | 2.44e-11 | 64.3 |
| MS.gene025360.t1 | AT5G11050 | 37.647 | 85 | 53 | 0 | 4 | 88 | 106 | 190 | 5.43e-11 | 64.3 |
| MS.gene025360.t1 | AT5G67300 | 29.412 | 119 | 82 | 1 | 4 | 120 | 7 | 125 | 8.28e-11 | 63.2 |
| MS.gene025360.t1 | AT3G29020 | 27.108 | 166 | 101 | 4 | 2 | 155 | 66 | 223 | 8.59e-11 | 63.2 |
Find 0 sgRNAs with CRISPR-Local
Find 128 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AATTTCATCCAATTCTTGAT+CGG | + | 14599:8133-8152 | None:intergenic | 25.0% |
| ! | GAAATATGGTAAAAATCAGT+GGG | - | 14599:7288-7307 | MS.gene025360:CDS | 25.0% |
| ! | TGAAATATGGTAAAAATCAG+TGG | - | 14599:7287-7306 | MS.gene025360:CDS | 25.0% |
| AAAAAGCAAAAAGGAAAGCT+AGG | - | 14599:7713-7732 | MS.gene025360:CDS | 30.0% | |
| AAAAGCAAAAAGGAAAGCTA+GGG | - | 14599:7714-7733 | MS.gene025360:CDS | 30.0% | |
| AAAGCTGCTGTTATGAAATA+TGG | - | 14599:7274-7293 | MS.gene025360:CDS | 30.0% | |
| ACAGAAAAAGAGAGAATTGA+AGG | - | 14599:7774-7793 | MS.gene025360:CDS | 30.0% | |
| ACTACTATAGAAGAACTTGA+GGG | - | 14599:7940-7959 | MS.gene025360:CDS | 30.0% | |
| CAAGTTCTTCTATAGTAGTA+GGG | + | 14599:7939-7958 | None:intergenic | 30.0% | |
| CGAAAGGTAAAAAAGCAAAA+AGG | - | 14599:7704-7723 | MS.gene025360:CDS | 30.0% | |
| TACTACTATAGAAGAACTTG+AGG | - | 14599:7939-7958 | MS.gene025360:CDS | 30.0% | |
| TCAAGTTCTTCTATAGTAGT+AGG | + | 14599:7940-7959 | None:intergenic | 30.0% | |
| !!! | TTATTTTGATGTTGCTGATG+AGG | - | 14599:7888-7907 | MS.gene025360:CDS | 30.0% |
| AACCATTAGTGATACCATTG+TGG | - | 14599:7465-7484 | MS.gene025360:CDS | 35.0% | |
| AATTCTTGATCGGAAATCTG+AGG | + | 14599:8123-8142 | None:intergenic | 35.0% | |
| ACATCAAAATAACCCAAAGG+AGG | + | 14599:7880-7899 | None:intergenic | 35.0% | |
| ACCATTAGTGATACCATTGT+GGG | - | 14599:7466-7485 | MS.gene025360:CDS | 35.0% | |
| ATTGGATGAAATTGCCAAGT+TGG | - | 14599:8140-8159 | MS.gene025360:CDS | 35.0% | |
| ATTTCATAACAGCAGCTTTC+AGG | + | 14599:7273-7292 | None:intergenic | 35.0% | |
| CAAGGAATAAAATTGCAGAG+AGG | - | 14599:8010-8029 | MS.gene025360:CDS | 35.0% | |
| CAGAAATTCCGTTTGAGAAA+AGG | - | 14599:7854-7873 | MS.gene025360:CDS | 35.0% | |
| CTACTATAGAAGAACTTGAG+GGG | - | 14599:7941-7960 | MS.gene025360:CDS | 35.0% | |
| GAAAAGAAGGATTGATGTTG+AGG | - | 14599:7963-7982 | MS.gene025360:CDS | 35.0% | |
| GCAACATCAAAATAACCCAA+AGG | + | 14599:7883-7902 | None:intergenic | 35.0% | |
| TAAAGGAGATGCTATCATGA+TGG | - | 14599:8299-8318 | MS.gene025360:CDS | 35.0% | |
| TCAGATTTCCGATCAAGAAT+TGG | - | 14599:8122-8141 | MS.gene025360:CDS | 35.0% | |
| TCATACTCATCCATATCAAC+AGG | + | 14599:7643-7662 | None:intergenic | 35.0% | |
| TGATATGGATGAGTATGAGA+AGG | - | 14599:7645-7664 | MS.gene025360:CDS | 35.0% | |
| TTGGATGAAATTGCCAAGTT+GGG | - | 14599:8141-8160 | MS.gene025360:CDS | 35.0% | |
| ! | ATCTCTTTCCAACTGTTTCT+GGG | + | 14599:8080-8099 | None:intergenic | 35.0% |
| ! | CATGATGGAAGCTGAAAATT+TGG | - | 14599:8314-8333 | MS.gene025360:CDS | 35.0% |
| ! | TGCATCCTTCAGATTTTTCT+GGG | - | 14599:8374-8393 | MS.gene025360:CDS | 35.0% |
| ! | TTGCATCCTTCAGATTTTTC+TGG | - | 14599:8373-8392 | MS.gene025360:CDS | 35.0% |
| AAGAACTTGAGGGGAAAAGA+AGG | - | 14599:7950-7969 | MS.gene025360:CDS | 40.0% | |
| AAGGACGATAACTATGAACC+TGG | - | 14599:7547-7566 | MS.gene025360:CDS | 40.0% | |
| ACCCACAATGGTATCACTAA+TGG | + | 14599:7470-7489 | None:intergenic | 40.0% | |
| AGCTTTCAGGATTTCATCCT+CGG | + | 14599:7260-7279 | None:intergenic | 40.0% | |
| AGGAGTTCTTAAAGGAGTCA+AGG | + | 14599:8262-8281 | None:intergenic | 40.0% | |
| AGTCCACTCAGTCTTCTTAA+TGG | + | 14599:7389-7408 | None:intergenic | 40.0% | |
| ATAGCATCTCCTTTACTAGC+TGG | + | 14599:8294-8313 | None:intergenic | 40.0% | |
| CACTCAGTCTTCTTAATGGA+AGG | + | 14599:7385-7404 | None:intergenic | 40.0% | |
| CTCATCCATATCAACAGGAT+CGG | + | 14599:7638-7657 | None:intergenic | 40.0% | |
| CTTCCATTAAGAAGACTGAG+TGG | - | 14599:7383-7402 | MS.gene025360:CDS | 40.0% | |
| GATCTCTTTCCAACTGTTTC+TGG | + | 14599:8081-8100 | None:intergenic | 40.0% | |
| GTTATCGTCCTTAACACAAG+TGG | + | 14599:7539-7558 | None:intergenic | 40.0% | |
| TCATCCATATCAACAGGATC+GGG | + | 14599:7637-7656 | None:intergenic | 40.0% | |
| TCGTTTGCAAATCTGCAGAA+CGG | - | 14599:7329-7348 | MS.gene025360:CDS | 40.0% | |
| TGATGTTGCTGATGAGGATA+GGG | - | 14599:7894-7913 | MS.gene025360:CDS | 40.0% | |
| TGCAGATTTGCAAACGAGTA+GGG | + | 14599:7326-7345 | None:intergenic | 40.0% | |
| TGGGTGTCTGTGGATAATTA+GGG | + | 14599:8233-8252 | None:intergenic | 40.0% | |
| TTCTTAAAGGAGTCAAGGCT+TGG | + | 14599:8257-8276 | None:intergenic | 40.0% | |
| TTGATGTTGCTGATGAGGAT+AGG | - | 14599:7893-7912 | MS.gene025360:CDS | 40.0% | |
| TTGGGTGTCTGTGGATAATT+AGG | + | 14599:8234-8253 | None:intergenic | 40.0% | |
| TTTGAGAAAAGGCCTCCTTT+GGG | - | 14599:7865-7884 | MS.gene025360:CDS | 40.0% | |
| ! | AAAGGAGGCCTTTTCTCAAA+CGG | + | 14599:7865-7884 | None:intergenic | 40.0% |
| ! | GCATCCTTCAGATTTTTCTG+GGG | - | 14599:8375-8394 | MS.gene025360:CDS | 40.0% |
| ! | GTTCTCTGAGGAGTTCTTAA+AGG | + | 14599:8270-8289 | None:intergenic | 40.0% |
| AAGAGAGAATTGAAGGCTGC+TGG | - | 14599:7781-7800 | MS.gene025360:CDS | 45.0% | |
| AAGGATGCAACTCCTAACAG+TGG | + | 14599:8363-8382 | None:intergenic | 45.0% | |
| AATTTCCTAGGGTCATCACC+AGG | + | 14599:7568-7587 | None:intergenic | 45.0% | |
| AGAAACAGCTTGAGGAAGCA+AGG | - | 14599:7737-7756 | MS.gene025360:CDS | 45.0% | |
| AGAGAGAATTGAAGGCTGCT+GGG | - | 14599:7782-7801 | MS.gene025360:CDS | 45.0% | |
| AGGCTGCTGGGATTGATATA+AGG | - | 14599:7794-7813 | MS.gene025360:CDS | 45.0% | |
| CAGAGAACACCAGCTAGTAA+AGG | - | 14599:8282-8301 | MS.gene025360:CDS | 45.0% | |
| CTAATGGTTCTCCACTGAGT+AGG | + | 14599:7454-7473 | None:intergenic | 45.0% | |
| CTGAATGACCCAGAAACAGT+TGG | - | 14599:8069-8088 | MS.gene025360:CDS | 45.0% | |
| CTGCAGATTTGCAAACGAGT+AGG | + | 14599:7327-7346 | None:intergenic | 45.0% | |
| CTGGGATTGATATAAGGCAG+CGG | - | 14599:7800-7819 | MS.gene025360:CDS | 45.0% | |
| GTAAAGCTCGTTGGTATGAG+TGG | - | 14599:7353-7372 | MS.gene025360:CDS | 45.0% | |
| GTGACCCCAGAAAAATCTGA+AGG | + | 14599:8382-8401 | None:intergenic | 45.0% | |
| GTTTGAGAAAAGGCCTCCTT+TGG | - | 14599:7864-7883 | MS.gene025360:CDS | 45.0% | |
| TCTTGATCGGAAATCTGAGG+TGG | + | 14599:8120-8139 | None:intergenic | 45.0% | |
| TGAAAATTTGGCCAGGCTGA+GGG | - | 14599:8326-8345 | MS.gene025360:CDS | 45.0% | |
| TGAGAAAGCAAGACGTTGCA+AGG | - | 14599:7992-8011 | MS.gene025360:CDS | 45.0% | |
| TGGAAGCTGAAAATTTGGCC+AGG | - | 14599:8319-8338 | MS.gene025360:CDS | 45.0% | |
| TTACTAGCTGGTGTTCTCTG+AGG | + | 14599:8282-8301 | None:intergenic | 45.0% | |
| TTCTGGGTCATTCAGCTTCT+TGG | + | 14599:8064-8083 | None:intergenic | 45.0% | |
| ! | AAAGGAGTCAAGGCTTGGTT+GGG | + | 14599:8252-8271 | None:intergenic | 45.0% |
| ! | TAAAGGAGTCAAGGCTTGGT+TGG | + | 14599:8253-8272 | None:intergenic | 45.0% |
| AACAGCTTGAGGAAGCAAGG+AGG | - | 14599:7740-7759 | MS.gene025360:CDS | 50.0% | |
| ACCCTAGGAAATTGCGTCCA+GGG | - | 14599:7575-7594 | MS.gene025360:CDS | 50.0% | |
| AGCTAGGGAGAAACAGCTTG+AGG | - | 14599:7729-7748 | MS.gene025360:CDS | 50.0% | |
| AGGTGTTTGGACAAACACCG+AGG | - | 14599:7240-7259 | MS.gene025360:CDS | 50.0% | |
| CAGAACGGTGTAAAGCTCGT+TGG | - | 14599:7344-7363 | MS.gene025360:CDS | 50.0% | |
| CCTTAACACAAGTGGCGTCA+AGG | + | 14599:7531-7550 | None:intergenic | 50.0% | |
| CCTTGACGCCACTTGTGTTA+AGG | - | 14599:7528-7547 | MS.gene025360:CDS | 50.0% | |
| CTAAGCTTACGCCTACTCAG+TGG | - | 14599:7440-7459 | MS.gene025360:CDS | 50.0% | |
| CTCCTTCGCAGTGTCTTGAA+CGG | - | 14599:7494-7513 | MS.gene025360:CDS | 50.0% | |
| CTGAAAATTTGGCCAGGCTG+AGG | - | 14599:8325-8344 | MS.gene025360:CDS | 50.0% | |
| GAGTCTCAGACACCACTGTT+AGG | - | 14599:8348-8367 | MS.gene025360:CDS | 50.0% | |
| GCAGGCTTCGATTCAGGATT+CGG | + | 14599:7610-7629 | None:intergenic | 50.0% | |
| GGATTGATATAAGGCAGCGG+AGG | - | 14599:7803-7822 | MS.gene025360:CDS | 50.0% | |
| GGTTATGCCAGTGACCTTGT+GGG | - | 14599:8162-8181 | MS.gene025360:CDS | 50.0% | |
| GTCACTGGCATAACCCAACT+TGG | + | 14599:8157-8176 | None:intergenic | 50.0% | |
| TACCGTTCAAGACACTGCGA+AGG | + | 14599:7499-7518 | None:intergenic | 50.0% | |
| TGAGTTCATTGCTGCCCACA+AGG | + | 14599:8179-8198 | None:intergenic | 50.0% | |
| TGCTTTCCGAAGCATGTGCT+CGG | - | 14599:7671-7690 | MS.gene025360:CDS | 50.0% | |
| TGTTGCTGATGAGGATAGGG+AGG | - | 14599:7897-7916 | MS.gene025360:CDS | 50.0% | |
| TTGATATAAGGCAGCGGAGG+AGG | - | 14599:7806-7825 | MS.gene025360:CDS | 50.0% | |
| TTGGCATGCAGAATAGCAGC+CGG | + | 14599:8045-8064 | None:intergenic | 50.0% | |
| ! | ATGAACCTGGTGATGACCCT+AGG | - | 14599:7560-7579 | MS.gene025360:CDS | 50.0% |
| ! | TGATCGGAAATCTGAGGTGG+TGG | + | 14599:8117-8136 | None:intergenic | 50.0% |
| ACGAGTAGCACTGCTGCCTT+CGG | + | 14599:8202-8221 | None:intergenic | 55.0% | |
| AGCCAACCGAGCACATGCTT+CGG | + | 14599:7680-7699 | None:intergenic | 55.0% | |
| AGCGGAGGAGGAAAAGGAGA+GGG | - | 14599:7818-7837 | MS.gene025360:CDS | 55.0% | |
| ATTGCTGCCCACAAGGTCAC+TGG | + | 14599:8172-8191 | None:intergenic | 55.0% | |
| CCCCTGGACGCAATTTCCTA+GGG | + | 14599:7579-7598 | None:intergenic | 55.0% | |
| CCCTAGGAAATTGCGTCCAG+GGG | - | 14599:7576-7595 | MS.gene025360:CDS | 55.0% | |
| GACCCTAGGAAATTGCGTCC+AGG | - | 14599:7574-7593 | MS.gene025360:CDS | 55.0% | |
| GCGACCCGATCCTGTTGATA+TGG | - | 14599:7630-7649 | MS.gene025360:CDS | 55.0% | |
| GGATTCGGATCAATCTCCCC+TGG | + | 14599:7595-7614 | None:intergenic | 55.0% | |
| GGCAGCAATGAACTCACCGA+AGG | - | 14599:8183-8202 | MS.gene025360:CDS | 55.0% | |
| GGGTTATGCCAGTGACCTTG+TGG | - | 14599:8161-8180 | MS.gene025360:CDS | 55.0% | |
| TAAGGCAGCGGAGGAGGAAA+AGG | - | 14599:7812-7831 | MS.gene025360:CDS | 55.0% | |
| TCCCCTGGACGCAATTTCCT+AGG | + | 14599:7580-7599 | None:intergenic | 55.0% | |
| TGCTGATGAGGATAGGGAGG+TGG | - | 14599:7900-7919 | MS.gene025360:CDS | 55.0% | |
| TGGCATGCAGAATAGCAGCC+GGG | + | 14599:8044-8063 | None:intergenic | 55.0% | |
| TTCCGAAGCATGTGCTCGGT+TGG | - | 14599:7675-7694 | MS.gene025360:CDS | 55.0% | |
| ! | AAGGCTTGGTTGGGTGTCTG+TGG | + | 14599:8243-8262 | None:intergenic | 55.0% |
| ! | CGAAGGAGTACGACCCACAA+TGG | + | 14599:7482-7501 | None:intergenic | 55.0% |
| ! | GACTGAGTGGACTCGAGAAG+AGG | - | 14599:7396-7415 | MS.gene025360:CDS | 55.0% |
| ! | GCTCGGTTGGCTAACACGAA+AGG | - | 14599:7688-7707 | MS.gene025360:CDS | 55.0% |
| CAGCGGAGGAGGAAAAGGAG+AGG | - | 14599:7817-7836 | MS.gene025360:CDS | 60.0% | |
| GGCATGCAGAATAGCAGCCG+GGG | + | 14599:8043-8062 | None:intergenic | 60.0% | |
| TGCAGAGAGGCAAGATGCCC+CGG | - | 14599:8023-8042 | MS.gene025360:CDS | 60.0% | |
| ! | TGTCTGAGACTCCCTCAGCC+TGG | + | 14599:8340-8359 | None:intergenic | 60.0% |
| GGTCGCGCAGGCTTCGATTC+AGG | + | 14599:7616-7635 | None:intergenic | 65.0% | |
| TCAACAGGATCGGGTCGCGC+AGG | + | 14599:7628-7647 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 14599 | gene | 7232 | 8407 | 7232 | ID=MS.gene025360 |
| 14599 | mRNA | 7232 | 8407 | 7232 | ID=MS.gene025360.t1;Parent=MS.gene025360 |
| 14599 | exon | 7232 | 8407 | 7232 | ID=MS.gene025360.t1.exon1;Parent=MS.gene025360.t1 |
| 14599 | CDS | 7232 | 8407 | 7232 | ID=cds.MS.gene025360.t1;Parent=MS.gene025360.t1 |
| Gene Sequence |
| Protein sequence |
