Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025736.t1 | AKL59481.1 | 94.5 | 293 | 11 | 1 | 1 | 288 | 1 | 293 | 3.60E-148 | 534.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025736.t1 | P46606 | 78.3 | 295 | 54 | 4 | 1 | 287 | 1 | 293 | 1.4e-124 | 447.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025736.t1 | A0A0H3W9R2 | 94.5 | 293 | 11 | 1 | 1 | 288 | 1 | 293 | 2.6e-148 | 534.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene025736.t1 | TF | HB-KNOX |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025736.t1 | MTR_5g011070 | 98.288 | 292 | 1 | 2 | 1 | 288 | 1 | 292 | 0.0 | 584 |
| MS.gene025736.t1 | MTR_1g012960 | 70.036 | 277 | 79 | 2 | 15 | 288 | 161 | 436 | 2.50e-137 | 395 |
| MS.gene025736.t1 | MTR_3g106400 | 69.057 | 265 | 81 | 1 | 25 | 288 | 107 | 371 | 2.52e-133 | 382 |
| MS.gene025736.t1 | MTR_3g106400 | 69.057 | 265 | 81 | 1 | 25 | 288 | 107 | 371 | 3.12e-133 | 382 |
| MS.gene025736.t1 | MTR_3g106400 | 69.057 | 265 | 81 | 1 | 25 | 288 | 107 | 371 | 1.42e-132 | 382 |
| MS.gene025736.t1 | MTR_4g116545 | 68.914 | 267 | 80 | 1 | 22 | 288 | 68 | 331 | 1.53e-132 | 379 |
| MS.gene025736.t1 | MTR_2g461240 | 68.679 | 265 | 80 | 2 | 23 | 287 | 93 | 354 | 1.41e-130 | 375 |
| MS.gene025736.t1 | MTR_4g116545 | 69.291 | 254 | 75 | 1 | 22 | 275 | 68 | 318 | 3.08e-129 | 371 |
| MS.gene025736.t1 | MTR_1g084060 | 34.375 | 256 | 138 | 5 | 21 | 272 | 16 | 245 | 1.24e-32 | 121 |
| MS.gene025736.t1 | MTR_1g084060 | 34.375 | 256 | 138 | 5 | 21 | 272 | 16 | 245 | 2.85e-32 | 121 |
| MS.gene025736.t1 | MTR_1g017080 | 32.932 | 249 | 142 | 6 | 24 | 272 | 119 | 342 | 1.32e-29 | 115 |
| MS.gene025736.t1 | MTR_5g033720 | 34.387 | 253 | 132 | 6 | 24 | 272 | 72 | 294 | 1.01e-28 | 112 |
| MS.gene025736.t1 | MTR_5g085860 | 30.364 | 247 | 139 | 4 | 27 | 272 | 49 | 263 | 9.77e-24 | 98.2 |
| MS.gene025736.t1 | MTR_2g024390 | 29.317 | 249 | 148 | 4 | 24 | 272 | 117 | 337 | 1.83e-23 | 99.0 |
| MS.gene025736.t1 | MTR_7g065050 | 37.349 | 83 | 50 | 1 | 204 | 286 | 298 | 378 | 4.12e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025736.t1 | AT1G62990 | 79.181 | 293 | 52 | 4 | 1 | 287 | 1 | 290 | 3.01e-169 | 470 |
| MS.gene025736.t1 | AT5G25220 | 66.330 | 297 | 79 | 5 | 7 | 288 | 129 | 419 | 2.09e-135 | 389 |
| MS.gene025736.t1 | AT5G25220 | 66.216 | 296 | 79 | 5 | 7 | 287 | 129 | 418 | 1.40e-134 | 388 |
| MS.gene025736.t1 | AT5G11060 | 68.657 | 268 | 78 | 2 | 21 | 287 | 120 | 382 | 1.72e-132 | 381 |
| MS.gene025736.t1 | AT4G32040 | 63.441 | 279 | 93 | 5 | 14 | 288 | 106 | 379 | 5.59e-118 | 343 |
| MS.gene025736.t1 | AT4G32040 | 63.441 | 279 | 93 | 5 | 14 | 288 | 106 | 379 | 9.43e-118 | 343 |
| MS.gene025736.t1 | AT1G70510 | 33.597 | 253 | 132 | 5 | 24 | 272 | 69 | 289 | 2.59e-33 | 124 |
| MS.gene025736.t1 | AT1G70510 | 32.411 | 253 | 139 | 4 | 24 | 272 | 69 | 293 | 3.20e-32 | 121 |
| MS.gene025736.t1 | AT1G23380 | 34.800 | 250 | 133 | 6 | 24 | 272 | 85 | 305 | 3.22e-32 | 121 |
| MS.gene025736.t1 | AT1G23380 | 34.524 | 252 | 133 | 7 | 24 | 272 | 85 | 307 | 2.64e-30 | 116 |
| MS.gene025736.t1 | AT4G08150 | 30.385 | 260 | 147 | 7 | 19 | 272 | 129 | 360 | 1.46e-27 | 110 |
| MS.gene025736.t1 | AT1G62360 | 29.317 | 249 | 150 | 4 | 24 | 272 | 121 | 343 | 2.24e-22 | 95.9 |
Find 62 sgRNAs with CRISPR-Local
Find 262 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTATTTCAGGAGTGAGTT+TGG | 0.300536 | 5.3:-4700286 | MS.gene025736:intron |
| AGTCAAGAATTGAAGATGTA+AGG | 0.320951 | 5.3:-4699967 | MS.gene025736:CDS |
| TCATGCTGTTGAAGCTGTTA+TGG | 0.321045 | 5.3:-4702764 | MS.gene025736:CDS |
| GAACAATTGCAGATGGATTA+TGG | 0.322505 | 5.3:-4700225 | MS.gene025736:CDS |
| AGCTGAAGCAAATCAATAAT+TGG | 0.323659 | 5.3:-4699546 | MS.gene025736:CDS |
| ATGTAAGGGAGGAAATATTA+AGG | 0.375793 | 5.3:-4699952 | MS.gene025736:CDS |
| TTTATTTCAGGAGTGAGTTT+GGG | 0.389051 | 5.3:-4700285 | MS.gene025736:intron |
| GGGATGATGCAGGGTGGTTA+CGG | 0.410673 | 5.3:-4703433 | MS.gene025736:CDS |
| AAGAAGAGCTGGAAAATTAC+CGG | 0.413561 | 5.3:-4699927 | MS.gene025736:CDS |
| TTAATCAAAGGAAAAGAAAC+TGG | 0.420427 | 5.3:-4699519 | MS.gene025736:CDS |
| ATCAATGGTAACTGATCTAT+AGG | 0.425631 | 5.3:+4703304 | None:intergenic |
| TATACCTGTGAGGGCTTGTA+AGG | 0.438851 | 5.3:+4702720 | None:intergenic |
| CAACTTCAGTCTTAAAGAAC+TGG | 0.439479 | 5.3:-4699898 | MS.gene025736:CDS |
| ACTCAAAATTGAGCTCAAAC+AGG | 0.454282 | 5.3:-4700097 | MS.gene025736:intron |
| GTCAAGAATTGAAGATGTAA+GGG | 0.466928 | 5.3:-4699966 | MS.gene025736:CDS |
| GTGAGTTTGGGAGAAGGAAG+TGG | 0.468312 | 5.3:-4700273 | MS.gene025736:CDS |
| TCAGGAGTGAGTTTGGGAGA+AGG | 0.470466 | 5.3:-4700279 | MS.gene025736:intron |
| CAGGGTGGTTACGGTGGAGA+TGG | 0.478935 | 5.3:-4703424 | MS.gene025736:CDS |
| GAAATGCAAGAACCAAGCTT+AGG | 0.481189 | 5.3:-4703454 | MS.gene025736:CDS |
| GCAAAACTTGTGGAGGAGAC+AGG | 0.501622 | 5.3:-4699574 | MS.gene025736:CDS |
| GATAACTGAGCATCAATCAA+TGG | 0.510534 | 5.3:+4703289 | None:intergenic |
| AAATGCAAGAACCAAGCTTA+GGG | 0.512228 | 5.3:-4703453 | MS.gene025736:CDS |
| GGTGGTTACGGTGGAGATGG+TGG | 0.518305 | 5.3:-4703421 | MS.gene025736:CDS |
| TCAGATTCCGTAGGAAGTAA+TGG | 0.522855 | 5.3:+4700150 | None:intergenic |
| CCCTGCATCATCCCTAAGCT+TGG | 0.523912 | 5.3:+4703442 | None:intergenic |
| CTTGCGTTTCGACTTCAAAG+AGG | 0.527244 | 5.3:+4699474 | None:intergenic |
| ACCAAGCTTAGGGATGATGC+AGG | 0.529707 | 5.3:-4703443 | MS.gene025736:CDS |
| AATTAACATACAGTTGGGTA+AGG | 0.529902 | 5.3:+4699854 | None:intergenic |
| CTGGCACAGTAATTCTCAAT+CGG | 0.541137 | 5.3:-4699500 | MS.gene025736:CDS |
| GATAATCAGTCAAGTGGTGG+TGG | 0.544388 | 5.3:-4700198 | MS.gene025736:CDS |
| GATCATGACATGATGGGACT+TGG | 0.548603 | 5.3:-4700174 | MS.gene025736:CDS |
| ATATTAAGGAAAAGAAGAGC+TGG | 0.550111 | 5.3:-4699938 | MS.gene025736:CDS |
| ATAATTGGTTCATTAATCAA+AGG | 0.552236 | 5.3:-4699531 | MS.gene025736:CDS |
| ACTTGGTCCATTACTTCCTA+CGG | 0.552428 | 5.3:-4700157 | MS.gene025736:CDS |
| GGTTACGGTGGAGATGGTGG+CGG | 0.565738 | 5.3:-4703418 | MS.gene025736:CDS |
| TGGTGGTGATCATGACATGA+TGG | 0.573965 | 5.3:-4700181 | MS.gene025736:CDS |
| GGAATCTGAGAGGTCACTCA+TGG | 0.575291 | 5.3:-4700136 | MS.gene025736:CDS |
| AAGAATTGAAGATGTAAGGG+AGG | 0.579355 | 5.3:-4699963 | MS.gene025736:CDS |
| AGGAAGTGGTGCGACAATGT+CGG | 0.581478 | 5.3:-4700259 | MS.gene025736:CDS |
| CGGTGATAACAGACAACTGA+AGG | 0.583464 | 5.3:-4703398 | MS.gene025736:CDS |
| AAGACTGAAGTTGTGTCACC+CGG | 0.596174 | 5.3:+4699908 | None:intergenic |
| TGAAGATGAACAATTGCAGA+TGG | 0.612178 | 5.3:-4700232 | MS.gene025736:CDS |
| TCGAGTTGTTGACGATCATG+AGG | 0.612238 | 5.3:+4703211 | None:intergenic |
| ATGATGCAGGGTGGTTACGG+TGG | 0.613425 | 5.3:-4703430 | MS.gene025736:CDS |
| AATACCTTACAAGCCCTCAC+AGG | 0.617490 | 5.3:-4702724 | MS.gene025736:intron |
| CAGTGTACATATACCTGTGA+GGG | 0.621411 | 5.3:+4702711 | None:intergenic |
| CTTTGAAGTCGAAACGCAAG+AGG | 0.621918 | 5.3:-4699471 | MS.gene025736:CDS |
| AGAAGAGCTGGAAAATTACC+GGG | 0.627133 | 5.3:-4699926 | MS.gene025736:CDS |
| TGACAAAGCAAAACTTGTGG+AGG | 0.628394 | 5.3:-4699581 | MS.gene025736:CDS |
| CTTCAGTCTTAAAGAACTGG+TGG | 0.629856 | 5.3:-4699895 | MS.gene025736:CDS |
| GACAGAAGCTGTTCATACAA+AGG | 0.633295 | 5.3:+4703358 | None:intergenic |
| GGTCTAGATAATCAGTCAAG+TGG | 0.641451 | 5.3:-4700204 | MS.gene025736:CDS |
| GGTGGTGATCATGACATGAT+GGG | 0.646696 | 5.3:-4700180 | MS.gene025736:CDS |
| CTAGATAATCAGTCAAGTGG+TGG | 0.656919 | 5.3:-4700201 | MS.gene025736:CDS |
| AGTGACCTCTCAGATTCCGT+AGG | 0.660085 | 5.3:+4700141 | None:intergenic |
| AGATGACAAAGCAAAACTTG+TGG | 0.663448 | 5.3:-4699584 | MS.gene025736:CDS |
| GGTGGCAGCAACATGCAAAG+TGG | 0.673948 | 5.3:-4699877 | MS.gene025736:CDS |
| TGATAACAGACAACTGAAGG+CGG | 0.678858 | 5.3:-4703395 | MS.gene025736:CDS |
| TACTTCCTACGGAATCTGAG+AGG | 0.681932 | 5.3:-4700146 | MS.gene025736:CDS |
| CCAAGCTTAGGGATGATGCA+GGG | 0.690210 | 5.3:-4703442 | MS.gene025736:CDS |
| GCAGTGTACATATACCTGTG+AGG | 0.695254 | 5.3:+4702710 | None:intergenic |
| AGCTTAGGGATGATGCAGGG+TGG | 0.716120 | 5.3:-4703439 | MS.gene025736:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAATTTAATTTTTTATTA+TGG | - | chr5.3:4700350-4700369 | MS.gene025736:intron | 0.0% |
| !! | ATTAATTAATTAATGTAATC+CGG | - | chr5.3:4700735-4700754 | MS.gene025736:intron | 10.0% |
| !! | GATTTATTAAACAATAAAAT+GGG | + | chr5.3:4702148-4702167 | None:intergenic | 10.0% |
| !! | TATTGTTTAATAAATCATTT+GGG | - | chr5.3:4702152-4702171 | MS.gene025736:intron | 10.0% |
| !! | TGATTTATTAAACAATAAAA+TGG | + | chr5.3:4702149-4702168 | None:intergenic | 10.0% |
| !! | TTATTGTTTAATAAATCATT+TGG | - | chr5.3:4702151-4702170 | MS.gene025736:intron | 10.0% |
| !! | AAAAAAAAAAAAACGAATAG+TGG | + | chr5.3:4702393-4702412 | None:intergenic | 15.0% |
| !! | AAGAAAATAATAATTTCAGT+TGG | - | chr5.3:4701858-4701877 | MS.gene025736:intron | 15.0% |
| !! | AAGTAAAAAAAAAACTAAAC+TGG | - | chr5.3:4701642-4701661 | MS.gene025736:intron | 15.0% |
| !! | AATTATTTGAAGATTGTTTA+AGG | + | chr5.3:4702289-4702308 | None:intergenic | 15.0% |
| !! | AGTTGAAAAATAATAATAAC+AGG | - | chr5.3:4701085-4701104 | MS.gene025736:intron | 15.0% |
| !! | ATTTAACAAATCAATTAAAG+TGG | + | chr5.3:4700014-4700033 | None:intergenic | 15.0% |
| !! | CATTAGAAATAATTATACAT+GGG | + | chr5.3:4702192-4702211 | None:intergenic | 15.0% |
| !! | TCATTAGAAATAATTATACA+TGG | + | chr5.3:4702193-4702212 | None:intergenic | 15.0% |
| !! | TTACATGGAATAAATATATA+TGG | - | chr5.3:4702338-4702357 | MS.gene025736:intron | 15.0% |
| !!! | AATACCAATAATATGTTTTT+AGG | - | chr5.3:4700498-4700517 | MS.gene025736:intron | 15.0% |
| !!! | ATTATTTTCTTTTAAAGTGA+AGG | + | chr5.3:4701849-4701868 | None:intergenic | 15.0% |
| !!! | ATTTTAACCAATAAAATAAG+TGG | + | chr5.3:4700448-4700467 | None:intergenic | 15.0% |
| !!! | TTCCAAGATAATTTTTTTTT+GGG | - | chr5.3:4701698-4701717 | MS.gene025736:intron | 15.0% |
| !! | AAAGTTAATTAACATACAGT+TGG | + | chr5.3:4703074-4703093 | None:intergenic | 20.0% |
| !! | AAGAACTTGTAAATAACTTT+AGG | + | chr5.3:4701326-4701345 | None:intergenic | 20.0% |
| !! | AAGTTAATTAACATACAGTT+GGG | + | chr5.3:4703073-4703092 | None:intergenic | 20.0% |
| !! | ACAATCTAAAAGATGTATTT+AGG | + | chr5.3:4701514-4701533 | None:intergenic | 20.0% |
| !! | ATATTAATCTCTTATAGGTT+AGG | - | chr5.3:4700557-4700576 | MS.gene025736:intron | 20.0% |
| !! | ATATTTGCATAGAACAATTA+AGG | - | chr5.3:4701379-4701398 | MS.gene025736:intron | 20.0% |
| !! | ATGTATTTATTTGATCTTAC+CGG | - | chr5.3:4699772-4699791 | MS.gene025736:intron | 20.0% |
| !! | GCATAATCTCATTTATTAAT+TGG | + | chr5.3:4702913-4702932 | None:intergenic | 20.0% |
| !! | GTATACACAAATTAATTAGT+TGG | - | chr5.3:4700763-4700782 | MS.gene025736:intron | 20.0% |
| !! | GTTATGATTAATTAGTTACA+AGG | + | chr5.3:4702264-4702283 | None:intergenic | 20.0% |
| !! | TACATCTTAATCATACATAA+AGG | + | chr5.3:4701985-4702004 | None:intergenic | 20.0% |
| !! | TCACTATATTAATCTCTTAT+AGG | - | chr5.3:4700552-4700571 | MS.gene025736:intron | 20.0% |
| !! | TCCATAACAAGATTATAATT+CGG | + | chr5.3:4700898-4700917 | None:intergenic | 20.0% |
| !! | TTAAGTTATGAAAAAACTTG+TGG | - | chr5.3:4700306-4700325 | MS.gene025736:intron | 20.0% |
| !! | TTGATGTCAAAATTTGATAT+GGG | - | chr5.3:4702559-4702578 | MS.gene025736:intron | 20.0% |
| !! | TTTGATGTCAAAATTTGATA+TGG | - | chr5.3:4702558-4702577 | MS.gene025736:intron | 20.0% |
| !! | TTTGATTAATTATGATGTAC+TGG | - | chr5.3:4701754-4701773 | MS.gene025736:intron | 20.0% |
| !!! | AAATACATCTTTTAGATTGT+CGG | - | chr5.3:4701514-4701533 | MS.gene025736:intron | 20.0% |
| !!! | AACTAATTTGTCATATATGT+TGG | - | chr5.3:4700057-4700076 | MS.gene025736:intron | 20.0% |
| !!! | AGATTATGCATTAATTTGTA+GGG | - | chr5.3:4702924-4702943 | MS.gene025736:intron | 20.0% |
| !!! | AGGAAAATTCTGAAATTAAT+AGG | + | chr5.3:4700988-4701007 | None:intergenic | 20.0% |
| !!! | ATAATTGGTTCATTAATCAA+AGG | - | chr5.3:4703388-4703407 | MS.gene025736:CDS | 20.0% |
| !!! | ATTATAATCTTGTTATGGAA+AGG | - | chr5.3:4700899-4700918 | MS.gene025736:intron | 20.0% |
| !!! | CAAATTTTGACATCAAATTA+TGG | + | chr5.3:4702555-4702574 | None:intergenic | 20.0% |
| !!! | CTTCCAAGATAATTTTTTTT+TGG | - | chr5.3:4701697-4701716 | MS.gene025736:intron | 20.0% |
| !!! | CTTTTTAAAAAAAGTTGTGT+TGG | - | chr5.3:4701286-4701305 | MS.gene025736:intron | 20.0% |
| !!! | TAATTCAAAAAACATTGACT+AGG | + | chr5.3:4701884-4701903 | None:intergenic | 20.0% |
| !!! | TATTCTTCTAAAGCTATTTT+TGG | - | chr5.3:4700657-4700676 | MS.gene025736:intron | 20.0% |
| !!! | TCCAAGATAATTTTTTTTTG+GGG | - | chr5.3:4701699-4701718 | MS.gene025736:intron | 20.0% |
| !!! | TGTAGTATTGAATTTATTTC+AGG | - | chr5.3:4702622-4702641 | MS.gene025736:intron | 20.0% |
| !!! | TTTACTTCCACTTATTTTAT+TGG | - | chr5.3:4700438-4700457 | MS.gene025736:intron | 20.0% |
| ! | AAAGATAATCCCAATATGTT+AGG | - | chr5.3:4701166-4701185 | MS.gene025736:intron | 25.0% |
| ! | AACTAATCTGGTTAATATCA+TGG | - | chr5.3:4703301-4703320 | MS.gene025736:CDS | 25.0% |
| ! | AAGAACTTTATGAACTTAAG+TGG | + | chr5.3:4700258-4700277 | None:intergenic | 25.0% |
| ! | ACCGAATTATAATCTTGTTA+TGG | - | chr5.3:4700894-4700913 | MS.gene025736:intron | 25.0% |
| ! | ACTAATAAACTCTTCCAAAT+TGG | + | chr5.3:4700800-4700819 | None:intergenic | 25.0% |
| ! | AGTGCCTAAAAACATATTAT+TGG | + | chr5.3:4700505-4700524 | None:intergenic | 25.0% |
| ! | CATAGACTAATTCTTCTAAT+CGG | + | chr5.3:4701043-4701062 | None:intergenic | 25.0% |
| ! | CTTAATCATACATAAAGGAA+AGG | + | chr5.3:4701980-4701999 | None:intergenic | 25.0% |
| ! | GCTAATTTAAATAAGCTGAT+TGG | + | chr5.3:4700939-4700958 | None:intergenic | 25.0% |
| ! | TAATAATAACAGGAGACATT+TGG | - | chr5.3:4701095-4701114 | MS.gene025736:intron | 25.0% |
| ! | TAATTTGAAGATGTCCAAAA+TGG | + | chr5.3:4701823-4701842 | None:intergenic | 25.0% |
| ! | TGATTAATTAGTTACAAGGA+CGG | + | chr5.3:4702260-4702279 | None:intergenic | 25.0% |
| ! | TTAATCAAAGGAAAAGAAAC+TGG | - | chr5.3:4703400-4703419 | MS.gene025736:CDS | 25.0% |
| ! | TTTGGAAGAGTTTATTAGTT+TGG | - | chr5.3:4700801-4700820 | MS.gene025736:intron | 25.0% |
| !! | AAGAGTTTATTAGTTTGGTA+AGG | - | chr5.3:4700806-4700825 | MS.gene025736:intron | 25.0% |
| !! | ACACCAAAAAAAATGAGTTT+TGG | + | chr5.3:4699894-4699913 | None:intergenic | 25.0% |
| !! | ATATATACCCTTTTACTGTT+AGG | - | chr5.3:4701234-4701253 | MS.gene025736:intron | 25.0% |
| !! | TAATTTGTCATATATGTTGG+TGG | - | chr5.3:4700060-4700079 | MS.gene025736:intron | 25.0% |
| !! | TAATTTGTGTATACTCTTTC+CGG | + | chr5.3:4700757-4700776 | None:intergenic | 25.0% |
| !! | TTTCAGAATTTTCCTACATA+TGG | - | chr5.3:4700993-4701012 | MS.gene025736:intron | 25.0% |
| !! | TTTTGTCTAAGTAACATTCT+TGG | - | chr5.3:4702486-4702505 | MS.gene025736:intron | 25.0% |
| !!! | AATTTCCCTTAGTTTTGTTT+CGG | - | chr5.3:4702527-4702546 | MS.gene025736:intron | 25.0% |
| !!! | CTTCCAAAACTCATTTTTTT+TGG | - | chr5.3:4699888-4699907 | MS.gene025736:CDS | 25.0% |
| !!! | GAGATTATGCATTAATTTGT+AGG | - | chr5.3:4702923-4702942 | MS.gene025736:intron | 25.0% |
| !!! | GTAAGGTATTTTCAATATCA+CGG | + | chr5.3:4700185-4700204 | None:intergenic | 25.0% |
| !!! | TTTTGGTGTGATTAATTTGA+GGG | - | chr5.3:4699905-4699924 | MS.gene025736:CDS | 25.0% |
| !!! | TTTTTGGTGTGATTAATTTG+AGG | - | chr5.3:4699904-4699923 | MS.gene025736:CDS | 25.0% |
| AATTAACATACAGTTGGGTA+AGG | + | chr5.3:4703068-4703087 | None:intergenic | 30.0% | |
| ACAAGATTATAATTCGGTTG+TGG | + | chr5.3:4700892-4700911 | None:intergenic | 30.0% | |
| ACTAATTCTTCTAATCGGAT+AGG | + | chr5.3:4701038-4701057 | None:intergenic | 30.0% | |
| ACTGTTTATCCAAACAACTT+CGG | - | chr5.3:4700403-4700422 | MS.gene025736:intron | 30.0% | |
| AGCTGAAGCAAATCAATAAT+TGG | - | chr5.3:4703373-4703392 | MS.gene025736:CDS | 30.0% | |
| AGTCAAGAATTGAAGATGTA+AGG | - | chr5.3:4702952-4702971 | MS.gene025736:intron | 30.0% | |
| ATATTAAGGAAAAGAAGAGC+TGG | - | chr5.3:4702981-4703000 | MS.gene025736:intron | 30.0% | |
| ATCAATGGTAACTGATCTAT+AGG | + | chr5.3:4699618-4699637 | None:intergenic | 30.0% | |
| ATGTAAGGGAGGAAATATTA+AGG | - | chr5.3:4702967-4702986 | MS.gene025736:intron | 30.0% | |
| ATTATAACACCGAAGTTGTT+TGG | + | chr5.3:4700415-4700434 | None:intergenic | 30.0% | |
| ATTCTTTGTAAATCAGTGTC+GGG | + | chr5.3:4703202-4703221 | None:intergenic | 30.0% | |
| ATTTATTTCAGGAGTGAGTT+TGG | - | chr5.3:4702633-4702652 | MS.gene025736:intron | 30.0% | |
| CAAGATTATAATTCGGTTGT+GGG | + | chr5.3:4700891-4700910 | None:intergenic | 30.0% | |
| CAGTTACACTCATATTTACA+TGG | - | chr5.3:4702323-4702342 | MS.gene025736:intron | 30.0% | |
| CGGTGAATTTAACATAATCA+CGG | - | chr5.3:4701534-4701553 | MS.gene025736:intron | 30.0% | |
| CTTTATGAACTTAAGTGGTA+CGG | + | chr5.3:4700253-4700272 | None:intergenic | 30.0% | |
| GAATGAATCTTGTGTGTATT+TGG | + | chr5.3:4703225-4703244 | None:intergenic | 30.0% | |
| GATTCTTTGTAAATCAGTGT+CGG | + | chr5.3:4703203-4703222 | None:intergenic | 30.0% | |
| GCCCCAAAAAAAAATTATCT+TGG | + | chr5.3:4701703-4701722 | None:intergenic | 30.0% | |
| GTCAAGAATTGAAGATGTAA+GGG | - | chr5.3:4702953-4702972 | MS.gene025736:intron | 30.0% | |
| GTTTGTAAAAACACGAATAG+TGG | + | chr5.3:4702430-4702449 | None:intergenic | 30.0% | |
| TCTAATGAGAAATTGCAAAG+TGG | - | chr5.3:4702205-4702224 | MS.gene025736:intron | 30.0% | |
| TTAGTATAATTCATGGCCAT+GGG | - | chr5.3:4699929-4699948 | MS.gene025736:CDS | 30.0% | |
| TTCTCATAGTACGAAAAGAA+TGG | + | chr5.3:4701604-4701623 | None:intergenic | 30.0% | |
| TTTATTTCAGGAGTGAGTTT+GGG | - | chr5.3:4702634-4702653 | MS.gene025736:intron | 30.0% | |
| ! | AATTTTATCTTCTCCGAAAC+TGG | + | chr5.3:4703150-4703169 | None:intergenic | 30.0% |
| ! | TGTACACTAGTACGATTTTA+AGG | + | chr5.3:4701353-4701372 | None:intergenic | 30.0% |
| !! | TTTTATTTGTGCCAACAAAG+AGG | - | chr5.3:4699959-4699978 | MS.gene025736:CDS | 30.0% |
| !!! | AAGCTATTTTTGGTGGATTT+TGG | - | chr5.3:4700667-4700686 | MS.gene025736:intron | 30.0% |
| !!! | AGCTTACAGTTTTGATTTTG+TGG | - | chr5.3:4701207-4701226 | MS.gene025736:intron | 30.0% |
| !!! | TCTTCTAAAGCTATTTTTGG+TGG | - | chr5.3:4700660-4700679 | MS.gene025736:intron | 30.0% |
| AAGAAGAGCTGGAAAATTAC+CGG | - | chr5.3:4702992-4703011 | MS.gene025736:intron | 35.0% | |
| AAGAATTGAAGATGTAAGGG+AGG | - | chr5.3:4702956-4702975 | MS.gene025736:intron | 35.0% | |
| AAGCATTACCTTGGTTGAAT+AGG | - | chr5.3:4701406-4701425 | MS.gene025736:intron | 35.0% | |
| AATAACAGGAGACATTTGGA+AGG | - | chr5.3:4701099-4701118 | MS.gene025736:intron | 35.0% | |
| AATGAAAAGCTGTTCATGTC+TGG | - | chr5.3:4702113-4702132 | MS.gene025736:intron | 35.0% | |
| ACTCAAAATTGAGCTCAAAC+AGG | - | chr5.3:4702822-4702841 | MS.gene025736:CDS | 35.0% | |
| ACTCATAAGTATTACGTACG+AGG | + | chr5.3:4699740-4699759 | None:intergenic | 35.0% | |
| AGAAATTACATGCAGAAGGA+AGG | + | chr5.3:4703097-4703116 | None:intergenic | 35.0% | |
| AGATGACAAAGCAAAACTTG+TGG | - | chr5.3:4703335-4703354 | MS.gene025736:CDS | 35.0% | |
| AGCATTACCTTGGTTGAATA+GGG | - | chr5.3:4701407-4701426 | MS.gene025736:intron | 35.0% | |
| AGTGTTCTACTTCCATATGT+AGG | + | chr5.3:4701008-4701027 | None:intergenic | 35.0% | |
| ATAACAGGAGACATTTGGAA+GGG | - | chr5.3:4701100-4701119 | MS.gene025736:intron | 35.0% | |
| ATCCACATCCACTAACATAA+GGG | - | chr5.3:4702045-4702064 | MS.gene025736:intron | 35.0% | |
| ATGGAACCGAAACAAAACTA+AGG | + | chr5.3:4702536-4702555 | None:intergenic | 35.0% | |
| ATGTGTCAACAAAACTTGAC+CGG | + | chr5.3:4699794-4699813 | None:intergenic | 35.0% | |
| CAAATAAAACCAGAAACCCA+TGG | + | chr5.3:4699948-4699967 | None:intergenic | 35.0% | |
| CAACTTCAGTCTTAAAGAAC+TGG | - | chr5.3:4703021-4703040 | MS.gene025736:intron | 35.0% | |
| CTAGTAGCCTAACAGTAAAA+GGG | + | chr5.3:4701244-4701263 | None:intergenic | 35.0% | |
| CTTAGTATAATTCATGGCCA+TGG | - | chr5.3:4699928-4699947 | MS.gene025736:CDS | 35.0% | |
| GACAGAAAGCCTAACATATT+GGG | + | chr5.3:4701178-4701197 | None:intergenic | 35.0% | |
| GAGAGCAATGTAGTTACATA+AGG | + | chr5.3:4702074-4702093 | None:intergenic | 35.0% | |
| GATAACTGAGCATCAATCAA+TGG | + | chr5.3:4699633-4699652 | None:intergenic | 35.0% | |
| GATCAGAAATTACATGCAGA+AGG | + | chr5.3:4703101-4703120 | None:intergenic | 35.0% | |
| GTATCCATGGCTATTTAAGT+AGG | - | chr5.3:4701776-4701795 | MS.gene025736:intron | 35.0% | |
| GTTTAACGTGCAGATACATA+TGG | + | chr5.3:4702589-4702608 | None:intergenic | 35.0% | |
| TAAGGAATCAAGCATTACCT+TGG | - | chr5.3:4701397-4701416 | MS.gene025736:intron | 35.0% | |
| TATCCACATCCACTAACATA+AGG | - | chr5.3:4702044-4702063 | MS.gene025736:intron | 35.0% | |
| TCATCCTACTTAAATAGCCA+TGG | + | chr5.3:4701783-4701802 | None:intergenic | 35.0% | |
| TCCATCAAAATCCTCTTTGT+TGG | + | chr5.3:4699973-4699992 | None:intergenic | 35.0% | |
| TGAAGATGAACAATTGCAGA+TGG | - | chr5.3:4702687-4702706 | MS.gene025736:intron | 35.0% | |
| TGACAGAAAGCCTAACATAT+TGG | + | chr5.3:4701179-4701198 | None:intergenic | 35.0% | |
| TGAGGGCTTAGTATAATTCA+TGG | - | chr5.3:4699922-4699941 | MS.gene025736:CDS | 35.0% | |
| TGGAACCGAAACAAAACTAA+GGG | + | chr5.3:4702535-4702554 | None:intergenic | 35.0% | |
| TGGTTACATAGCAACCAATT+TGG | - | chr5.3:4700783-4700802 | MS.gene025736:intron | 35.0% | |
| TTCGTACTATGAGAAATGCT+AGG | - | chr5.3:4701609-4701628 | MS.gene025736:intron | 35.0% | |
| TTGGCTAATCTGAAGAAAGT+GGG | - | chr5.3:4700686-4700705 | MS.gene025736:intron | 35.0% | |
| TTTGGCTAATCTGAAGAAAG+TGG | - | chr5.3:4700685-4700704 | MS.gene025736:intron | 35.0% | |
| ! | CGACATTTAACTGTCCATTT+TGG | - | chr5.3:4701806-4701825 | MS.gene025736:intron | 35.0% |
| ! | CGTATGTTTAGTTCCAGTTT+CGG | - | chr5.3:4703134-4703153 | MS.gene025736:intron | 35.0% |
| ! | CTTTTACTGTTAGGCTACTA+GGG | - | chr5.3:4701243-4701262 | MS.gene025736:intron | 35.0% |
| ! | GACATGAACAGCTTTTCATT+TGG | + | chr5.3:4702113-4702132 | None:intergenic | 35.0% |
| ! | GTTAATATCATGGTTTGTGC+AGG | - | chr5.3:4703311-4703330 | MS.gene025736:CDS | 35.0% |
| ! | GTTAGGCATATGTTGTTGTT+TGG | - | chr5.3:4700574-4700593 | MS.gene025736:intron | 35.0% |
| ! | TCATTTGGAAGTTTGAGACA+TGG | + | chr5.3:4702098-4702117 | None:intergenic | 35.0% |
| ! | TTATGATGTACTGGTATCCA+TGG | - | chr5.3:4701763-4701782 | MS.gene025736:intron | 35.0% |
| ! | TTTTACTGTTAGGCTACTAG+GGG | - | chr5.3:4701244-4701263 | MS.gene025736:intron | 35.0% |
| !! | ACAAAGAGGATTTTGATGGA+TGG | - | chr5.3:4699973-4699992 | MS.gene025736:CDS | 35.0% |
| !! | ATGTTGTTGTTTGGTTTGGT+GGG | - | chr5.3:4700583-4700602 | MS.gene025736:intron | 35.0% |
| !! | CAAAGAGGATTTTGATGGAT+GGG | - | chr5.3:4699974-4699993 | MS.gene025736:CDS | 35.0% |
| !! | CATATATGTTGGTGGTTGTT+TGG | - | chr5.3:4700068-4700087 | MS.gene025736:intron | 35.0% |
| !! | GAACAATTGCAGATGGATTA+TGG | - | chr5.3:4702694-4702713 | MS.gene025736:intron | 35.0% |
| !! | GAAGTTGATGCTATAAGGAA+TGG | + | chr5.3:4701681-4701700 | None:intergenic | 35.0% |
| !! | GCATATGTTGTTGTTTGGTT+TGG | - | chr5.3:4700579-4700598 | MS.gene025736:intron | 35.0% |
| !! | TAGCTGGAGTGTGTTTTTAA+GGG | - | chr5.3:4701452-4701471 | MS.gene025736:intron | 35.0% |
| !! | TATGTTGTTGTTTGGTTTGG+TGG | - | chr5.3:4700582-4700601 | MS.gene025736:intron | 35.0% |
| !! | TCTTGGAAGTTGATGCTATA+AGG | + | chr5.3:4701686-4701705 | None:intergenic | 35.0% |
| !!! | TTTTTTTTTGGGGCAATGCT+AGG | - | chr5.3:4701709-4701728 | MS.gene025736:intron | 35.0% |
| AAGCTTATTACGTGTGTCGT+TGG | + | chr5.3:4703273-4703292 | None:intergenic | 40.0% | |
| ACTTGGTCCATTACTTCCTA+CGG | - | chr5.3:4702762-4702781 | MS.gene025736:CDS | 40.0% | |
| AGAAGAGCTGGAAAATTACC+GGG | - | chr5.3:4702993-4703012 | MS.gene025736:intron | 40.0% | |
| ATGAACTTAAGTGGTACGGA+GGG | + | chr5.3:4700249-4700268 | None:intergenic | 40.0% | |
| CAGTGTACATATACCTGTGA+GGG | + | chr5.3:4700211-4700230 | None:intergenic | 40.0% | |
| CCTAGTAGCCTAACAGTAAA+AGG | + | chr5.3:4701245-4701264 | None:intergenic | 40.0% | |
| CTAGATAATCAGTCAAGTGG+TGG | - | chr5.3:4702718-4702737 | MS.gene025736:intron | 40.0% | |
| CTGGCACAGTAATTCTCAAT+CGG | - | chr5.3:4703419-4703438 | MS.gene025736:CDS | 40.0% | |
| CTTAAAAACACACTCCAGCT+AGG | + | chr5.3:4701453-4701472 | None:intergenic | 40.0% | |
| CTTCAGTCTTAAAGAACTGG+TGG | - | chr5.3:4703024-4703043 | MS.gene025736:intron | 40.0% | |
| GACAGAAGCTGTTCATACAA+AGG | + | chr5.3:4699564-4699583 | None:intergenic | 40.0% | |
| GATTATAATTCGGTTGTGGG+TGG | + | chr5.3:4700888-4700907 | None:intergenic | 40.0% | |
| GCACACAAACAAGAGATATC+AGG | + | chr5.3:4701138-4701157 | None:intergenic | 40.0% | |
| GGATGTGGATACATGATGAT+GGG | + | chr5.3:4702035-4702054 | None:intergenic | 40.0% | |
| GGTCTAGATAATCAGTCAAG+TGG | - | chr5.3:4702715-4702734 | MS.gene025736:intron | 40.0% | |
| GGTTTCATATCATGGTTGGA+GGG | + | chr5.3:4700851-4700870 | None:intergenic | 40.0% | |
| GTGTCCATCATTGATGTTGT+TGG | - | chr5.3:4701939-4701958 | MS.gene025736:intron | 40.0% | |
| GTTGCCAACAACATCAATGA+TGG | + | chr5.3:4701946-4701965 | None:intergenic | 40.0% | |
| TATGAACTTAAGTGGTACGG+AGG | + | chr5.3:4700250-4700269 | None:intergenic | 40.0% | |
| TCAGATTCCGTAGGAAGTAA+TGG | + | chr5.3:4702772-4702791 | None:intergenic | 40.0% | |
| TCATGCTGTTGAAGCTGTTA+TGG | - | chr5.3:4700155-4700174 | MS.gene025736:CDS | 40.0% | |
| TCCACATCCACTAACATAAG+GGG | - | chr5.3:4702046-4702065 | MS.gene025736:intron | 40.0% | |
| TCGGGCTCATTCAAAACTTT+AGG | + | chr5.3:4703184-4703203 | None:intergenic | 40.0% | |
| TGACAAAGCAAAACTTGTGG+AGG | - | chr5.3:4703338-4703357 | MS.gene025736:CDS | 40.0% | |
| TGATAACAGACAACTGAAGG+CGG | - | chr5.3:4699524-4699543 | MS.gene025736:CDS | 40.0% | |
| TGCAAAGTGGAGCTTCAATA+GGG | - | chr5.3:4702218-4702237 | MS.gene025736:intron | 40.0% | |
| TGGATGTGGATACATGATGA+TGG | + | chr5.3:4702036-4702055 | None:intergenic | 40.0% | |
| TGGCTAATCTGAAGAAAGTG+GGG | - | chr5.3:4700687-4700706 | MS.gene025736:intron | 40.0% | |
| TTACCTTGGTTGAATAGGGA+TGG | - | chr5.3:4701411-4701430 | MS.gene025736:intron | 40.0% | |
| TTGCAAAGTGGAGCTTCAAT+AGG | - | chr5.3:4702217-4702236 | MS.gene025736:intron | 40.0% | |
| TTGTGGGTGGTAATAGTTGT+TGG | + | chr5.3:4700875-4700894 | None:intergenic | 40.0% | |
| TTGTTGGCGGTTTCATATCA+TGG | + | chr5.3:4700859-4700878 | None:intergenic | 40.0% | |
| ! | CCTTTTACTGTTAGGCTACT+AGG | - | chr5.3:4701242-4701261 | MS.gene025736:intron | 40.0% |
| ! | GATGTGGATACATGATGATG+GGG | + | chr5.3:4702034-4702053 | None:intergenic | 40.0% |
| ! | GCCAACAAAGAGGATTTTGA+TGG | - | chr5.3:4699969-4699988 | MS.gene025736:CDS | 40.0% |
| ! | TATCTCTTGTTTGTGTGCTG+TGG | - | chr5.3:4701140-4701159 | MS.gene025736:intron | 40.0% |
| !! | CTAGCTGGAGTGTGTTTTTA+AGG | - | chr5.3:4701451-4701470 | MS.gene025736:intron | 40.0% |
| !! | GATGATGGGGTCTCTAAATT+GGG | + | chr5.3:4702021-4702040 | None:intergenic | 40.0% |
| !! | GGTTTGGTGGGTTAGATATT+TGG | - | chr5.3:4700595-4700614 | MS.gene025736:intron | 40.0% |
| !! | TGATGATGGGGTCTCTAAAT+TGG | + | chr5.3:4702022-4702041 | None:intergenic | 40.0% |
| AAGACTGAAGTTGTGTCACC+CGG | + | chr5.3:4703014-4703033 | None:intergenic | 45.0% | |
| AATACCTTACAAGCCCTCAC+AGG | - | chr5.3:4700195-4700214 | MS.gene025736:CDS | 45.0% | |
| AATTCATGGCCATGGGTTTC+TGG | - | chr5.3:4699936-4699955 | MS.gene025736:CDS | 45.0% | |
| CCACATCCACTAACATAAGG+GGG | - | chr5.3:4702047-4702066 | MS.gene025736:intron | 45.0% | |
| CGGTGATAACAGACAACTGA+AGG | - | chr5.3:4699521-4699540 | MS.gene025736:CDS | 45.0% | |
| CGGTTTCATATCATGGTTGG+AGG | + | chr5.3:4700852-4700871 | None:intergenic | 45.0% | |
| CTAATCTGAAGAAAGTGGGG+GGG | - | chr5.3:4700690-4700709 | MS.gene025736:intron | 45.0% | |
| CTTGCGTTTCGACTTCAAAG+AGG | + | chr5.3:4703448-4703467 | None:intergenic | 45.0% | |
| GATAATCAGTCAAGTGGTGG+TGG | - | chr5.3:4702721-4702740 | MS.gene025736:intron | 45.0% | |
| GCAGTGTACATATACCTGTG+AGG | + | chr5.3:4700212-4700231 | None:intergenic | 45.0% | |
| GCTAATCTGAAGAAAGTGGG+GGG | - | chr5.3:4700689-4700708 | MS.gene025736:intron | 45.0% | |
| GGCTAATCTGAAGAAAGTGG+GGG | - | chr5.3:4700688-4700707 | MS.gene025736:intron | 45.0% | |
| GGTGGTGATCATGACATGAT+GGG | - | chr5.3:4702739-4702758 | MS.gene025736:CDS | 45.0% | |
| TAAGGTCCCCCTTATGTTAG+TGG | + | chr5.3:4702056-4702075 | None:intergenic | 45.0% | |
| TAATCTGAAGAAAGTGGGGG+GGG | - | chr5.3:4700691-4700710 | MS.gene025736:intron | 45.0% | |
| TACTTCCTACGGAATCTGAG+AGG | - | chr5.3:4702773-4702792 | MS.gene025736:CDS | 45.0% | |
| TATACCTGTGAGGGCTTGTA+AGG | + | chr5.3:4700202-4700221 | None:intergenic | 45.0% | |
| TGAACTTAAGTGGTACGGAG+GGG | + | chr5.3:4700248-4700267 | None:intergenic | 45.0% | |
| TGGCGGTTTCATATCATGGT+TGG | + | chr5.3:4700855-4700874 | None:intergenic | 45.0% | |
| TGGGTGGTAATAGTTGTTGG+CGG | + | chr5.3:4700872-4700891 | None:intergenic | 45.0% | |
| ! | AGACATTTGGAAGGGTTGGT+TGG | - | chr5.3:4701108-4701127 | MS.gene025736:intron | 45.0% |
| ! | GATCATGACATGATGGGACT+TGG | - | chr5.3:4702745-4702764 | MS.gene025736:CDS | 45.0% |
| ! | GCTTGTGTCGCTAACTAATC+TGG | - | chr5.3:4703289-4703308 | MS.gene025736:CDS | 45.0% |
| ! | TCGAGTTGTTGACGATCATG+AGG | + | chr5.3:4699711-4699730 | None:intergenic | 45.0% |
| ! | TGGTGGTGATCATGACATGA+TGG | - | chr5.3:4702738-4702757 | MS.gene025736:CDS | 45.0% |
| !! | CTTTGAAGTCGAAACGCAAG+AGG | - | chr5.3:4703448-4703467 | MS.gene025736:CDS | 45.0% |
| !! | GACATTTGGAAGGGTTGGTT+GGG | - | chr5.3:4701109-4701128 | MS.gene025736:intron | 45.0% |
| !!! | CAGCTGTGTTTTAACCTAGC+TGG | - | chr5.3:4701436-4701455 | MS.gene025736:intron | 45.0% |
| !! | CATTAATTAATTAATTAATT+AGG | + | chr5.3:4700730-4700749 | None:intergenic | 5.0% |
| !!! | AATTAAACAAATATTTTATT+TGG | + | chr5.3:4700529-4700548 | None:intergenic | 5.0% |
| ACCAAGCTTAGGGATGATGC+AGG | - | chr5.3:4699476-4699495 | MS.gene025736:CDS | 50.0% | |
| AGGAAGTGGTGCGACAATGT+CGG | - | chr5.3:4702660-4702679 | MS.gene025736:intron | 50.0% | |
| AGTGACCTCTCAGATTCCGT+AGG | + | chr5.3:4702781-4702800 | None:intergenic | 50.0% | |
| AGTGGAGCTTCAATAGGGAC+TGG | - | chr5.3:4702223-4702242 | MS.gene025736:intron | 50.0% | |
| CAGGAGACATTTGGAAGGGT+TGG | - | chr5.3:4701104-4701123 | MS.gene025736:intron | 50.0% | |
| CCAAGCTTAGGGATGATGCA+GGG | - | chr5.3:4699477-4699496 | MS.gene025736:CDS | 50.0% | |
| GAACTTAAGTGGTACGGAGG+GGG | + | chr5.3:4700247-4700266 | None:intergenic | 50.0% | |
| GCAAAACTTGTGGAGGAGAC+AGG | - | chr5.3:4703345-4703364 | MS.gene025736:CDS | 50.0% | |
| GCACCATCCCTATTCAACCA+AGG | + | chr5.3:4701417-4701436 | None:intergenic | 50.0% | |
| GGAATCTGAGAGGTCACTCA+TGG | - | chr5.3:4702783-4702802 | MS.gene025736:CDS | 50.0% | |
| GTGAGTTTGGGAGAAGGAAG+TGG | - | chr5.3:4702646-4702665 | MS.gene025736:intron | 50.0% | |
| TCAGGAGTGAGTTTGGGAGA+AGG | - | chr5.3:4702640-4702659 | MS.gene025736:intron | 50.0% | |
| ! | CCCCCTTATGTTAGTGGATG+TGG | + | chr5.3:4702050-4702069 | None:intergenic | 50.0% |
| !! | TGTTGGTGGTTGTTTGGTGC+AGG | - | chr5.3:4700074-4700093 | MS.gene025736:intron | 50.0% |
| AGCTTAGGGATGATGCAGGG+TGG | - | chr5.3:4699480-4699499 | MS.gene025736:CDS | 55.0% | |
| ATGATGCAGGGTGGTTACGG+TGG | - | chr5.3:4699489-4699508 | MS.gene025736:CDS | 55.0% | |
| CCCTGCATCATCCCTAAGCT+TGG | + | chr5.3:4699480-4699499 | None:intergenic | 55.0% | |
| GGGATGATGCAGGGTGGTTA+CGG | - | chr5.3:4699486-4699505 | MS.gene025736:CDS | 55.0% | |
| GGTACGGAGGGGGAGATATA+TGG | + | chr5.3:4700237-4700256 | None:intergenic | 55.0% | |
| GGTGGCAGCAACATGCAAAG+TGG | - | chr5.3:4703042-4703061 | MS.gene025736:intron | 55.0% | |
| CAGGGTGGTTACGGTGGAGA+TGG | - | chr5.3:4699495-4699514 | MS.gene025736:CDS | 60.0% | |
| GGTGGTTACGGTGGAGATGG+TGG | - | chr5.3:4699498-4699517 | MS.gene025736:CDS | 60.0% | |
| TGAAGAAAGTGGGGGGGGTG+TGG | - | chr5.3:4700696-4700715 | MS.gene025736:intron | 60.0% | |
| ! | GGTTACGGTGGAGATGGTGG+CGG | - | chr5.3:4699501-4699520 | MS.gene025736:CDS | 60.0% |
| ! | AAAGTGGGGGGGGTGTGGTG+GGG | - | chr5.3:4700701-4700720 | MS.gene025736:intron | 65.0% |
| ! | AGAAAGTGGGGGGGGTGTGG+TGG | - | chr5.3:4700699-4700718 | MS.gene025736:intron | 65.0% |
| ! | GAAAGTGGGGGGGGTGTGGT+GGG | - | chr5.3:4700700-4700719 | MS.gene025736:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 4699468 | 4703473 | 4699468 | ID=MS.gene025736 |
| chr5.3 | mRNA | 4699468 | 4703473 | 4699468 | ID=MS.gene025736.t1;Parent=MS.gene025736 |
| chr5.3 | exon | 4703201 | 4703473 | 4703201 | ID=MS.gene025736.t1.exon1;Parent=MS.gene025736.t1 |
| chr5.3 | CDS | 4703201 | 4703473 | 4703201 | ID=cds.MS.gene025736.t1;Parent=MS.gene025736.t1 |
| chr5.3 | exon | 4702725 | 4702845 | 4702725 | ID=MS.gene025736.t1.exon2;Parent=MS.gene025736.t1 |
| chr5.3 | CDS | 4702725 | 4702845 | 4702725 | ID=cds.MS.gene025736.t1;Parent=MS.gene025736.t1 |
| chr5.3 | exon | 4700098 | 4700297 | 4700098 | ID=MS.gene025736.t1.exon3;Parent=MS.gene025736.t1 |
| chr5.3 | CDS | 4700098 | 4700297 | 4700098 | ID=cds.MS.gene025736.t1;Parent=MS.gene025736.t1 |
| chr5.3 | exon | 4699865 | 4699996 | 4699865 | ID=MS.gene025736.t1.exon4;Parent=MS.gene025736.t1 |
| chr5.3 | CDS | 4699865 | 4699996 | 4699865 | ID=cds.MS.gene025736.t1;Parent=MS.gene025736.t1 |
| chr5.3 | exon | 4699468 | 4699608 | 4699468 | ID=MS.gene025736.t1.exon5;Parent=MS.gene025736.t1 |
| chr5.3 | CDS | 4699468 | 4699608 | 4699468 | ID=cds.MS.gene025736.t1;Parent=MS.gene025736.t1 |
| Gene Sequence |
| Protein sequence |
